HEADER TRANSFERASE 19-NOV-15 5FOE TITLE CRYSTAL STRUCTURE OF THE C. ELEGANS PROTEIN O-FUCOSYLTRANSFERASE 2 TITLE 2 (CEPOFUT2) DOUBLE MUTANT (R298K-R299K) IN COMPLEX WITH GDP AND THE TITLE 3 HUMAN TSR1 FROM THROMBOSPONDIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2,THROMBOSPONDIN-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PATTERNING DEFECTIVE PROTEIN 2,PEPTIDE-O-FUCOSYLTRANSFERASE COMPND 5 2,O-FUCT-2; COMPND 6 EC: 2.4.1.221; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 6239, 9606; SOURCE 5 GENE: PAD-2, K10G9.3, THBS1, TSP, TSP1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: X33; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZALPHAA KEYWDS TRANSFERASE, POFUT2, WATERS, FUSION PROTEIN, AFM, ITC, KEYWDS 2 GLYCOSYLTRANSFERASE, SITE-DIRECTED MUTAGENESIS, MOLECULAR DYNAMICS, KEYWDS 3 TSR1 EXPDTA X-RAY DIFFRACTION AUTHOR J.VALERO-GONZALEZ,C.LEONHARD-MELIEF,E.LIRA-NAVARRETE,G.JIMENEZ-OSES, AUTHOR 2 C.HERNANDEZ-RUIZ,M.C.PALLARES,I.YRUELA,D.VASUDEVAN,A.LOSTAO, AUTHOR 3 F.CORZANA,H.TAKEUCHI,R.S.HALTIWANGER,R.HURTADO-GUERRERO REVDAT 7 10-JAN-24 5FOE 1 HETSYN REVDAT 6 29-JUL-20 5FOE 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE REVDAT 5 15-MAR-17 5FOE 1 SOURCE REVDAT 4 30-MAR-16 5FOE 1 JRNL REVDAT 3 02-MAR-16 5FOE 1 JRNL REVDAT 2 10-FEB-16 5FOE 1 JRNL REVDAT 1 27-JAN-16 5FOE 0 JRNL AUTH J.VALERO-GONZALEZ,C.LEONHARD-MELIEF,E.LIRA-NAVARRETE, JRNL AUTH 2 G.JIMENEZ-OSES,C.HERNANDEZ-RUIZ,M.C.PALLARES,I.YRUELA, JRNL AUTH 3 D.VASUDEVAN,A.LOSTAO,F.CORZANA,H.TAKEUCHI,R.S.HALTIWANGER, JRNL AUTH 4 R.HURTADO-GUERRERO JRNL TITL A PROACTIVE ROLE OF WATER MOLECULES IN ACCEPTOR RECOGNITION JRNL TITL 2 OF THROMBOSPONDIN TYPE 1 REPEATS BY JRNL TITL 3 PROTEIN-O-FUCOSYLTRANSFERASE 2 JRNL REF NAT.CHEM.BIOL. V. 12 240 2016 JRNL REFN ISSN 1552-4450 JRNL PMID 26854667 JRNL DOI 10.1038/NCHEMBIO.2019 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 64467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1852 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7150 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 531 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.51000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.42000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.769 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7476 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6847 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10113 ; 1.565 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15747 ; 1.079 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 863 ; 6.728 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 392 ;33.372 ;23.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1276 ;16.347 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;15.853 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1045 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8357 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1839 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3455 ; 1.464 ; 2.135 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3454 ; 1.464 ; 2.134 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4311 ; 2.369 ; 3.191 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4021 ; 1.662 ; 2.362 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 426 REMARK 3 ORIGIN FOR THE GROUP (A): 22.7068 22.5930 3.0842 REMARK 3 T TENSOR REMARK 3 T11: 0.2131 T22: 0.0382 REMARK 3 T33: 0.0778 T12: 0.0069 REMARK 3 T13: -0.0899 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.5245 L22: 0.7858 REMARK 3 L33: 0.1097 L12: -0.3676 REMARK 3 L13: 0.1024 L23: -0.1300 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: -0.0192 S13: 0.0636 REMARK 3 S21: -0.0109 S22: 0.0006 S23: -0.1106 REMARK 3 S31: 0.0108 S32: 0.0019 S33: 0.0113 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 40 B 425 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1734 25.8030 36.5892 REMARK 3 T TENSOR REMARK 3 T11: 0.2005 T22: 0.1814 REMARK 3 T33: 0.0289 T12: -0.0497 REMARK 3 T13: -0.0653 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.1549 L22: 0.6731 REMARK 3 L33: 0.1272 L12: 0.2889 REMARK 3 L13: 0.1778 L23: 0.1305 REMARK 3 S TENSOR REMARK 3 S11: -0.0336 S12: 0.1737 S13: 0.0424 REMARK 3 S21: 0.0523 S22: 0.0149 S23: -0.0216 REMARK 3 S31: 0.0224 S32: -0.0927 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1003 A 1051 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3478 15.1347 -14.5227 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.1355 REMARK 3 T33: 0.0297 T12: 0.0082 REMARK 3 T13: -0.0760 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.4150 L22: 0.3049 REMARK 3 L33: 3.8722 L12: 0.6414 REMARK 3 L13: -1.1153 L23: -0.4798 REMARK 3 S TENSOR REMARK 3 S11: -0.0909 S12: 0.2913 S13: -0.0150 REMARK 3 S21: 0.0250 S22: 0.1179 S23: -0.0263 REMARK 3 S31: 0.2915 S32: -0.2274 S33: -0.0270 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1003 B 1051 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1492 17.7129 54.3295 REMARK 3 T TENSOR REMARK 3 T11: 0.2229 T22: 0.0656 REMARK 3 T33: 0.0864 T12: -0.0291 REMARK 3 T13: -0.0592 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.8515 L22: 0.2039 REMARK 3 L33: 3.2915 L12: -0.2137 REMARK 3 L13: -0.7230 L23: -0.4297 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: -0.0897 S13: -0.1476 REMARK 3 S21: -0.0672 S22: 0.0448 S23: 0.0595 REMARK 3 S31: 0.2465 S32: 0.0941 S33: -0.0095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5FOE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1290065606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 283636 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AP5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.72350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 PHE A 3 REMARK 465 PHE A 4 REMARK 465 PRO A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 VAL A 10 REMARK 465 LEU A 11 REMARK 465 PHE A 12 REMARK 465 PHE A 13 REMARK 465 ALA A 14 REMARK 465 GLU A 15 REMARK 465 LYS A 16 REMARK 465 ILE A 17 REMARK 465 ALA A 18 REMARK 465 PHE A 19 REMARK 465 ALA A 20 REMARK 465 GLU A 21 REMARK 465 ASN A 22 REMARK 465 SER A 23 REMARK 465 ASP A 24 REMARK 465 GLN A 25 REMARK 465 THR A 26 REMARK 465 VAL A 27 REMARK 465 SER A 28 REMARK 465 ARG A 29 REMARK 465 VAL A 30 REMARK 465 ASP A 31 REMARK 465 SER A 32 REMARK 465 ASN A 33 REMARK 465 ARG A 34 REMARK 465 TYR A 35 REMARK 465 SER A 36 REMARK 465 VAL A 37 REMARK 465 ALA A 38 REMARK 465 ALA A 39 REMARK 465 LEU A 88 REMARK 465 HIS A 89 REMARK 465 HIS A 90 REMARK 465 TRP A 91 REMARK 465 LYS A 92 REMARK 465 ARG A 93 REMARK 465 MET A 94 REMARK 465 SER A 979 REMARK 465 SER A 980 REMARK 465 GLY A 981 REMARK 465 GLY A 982 REMARK 465 GLY A 983 REMARK 465 GLY A 984 REMARK 465 SER A 985 REMARK 465 GLY A 986 REMARK 465 GLY A 987 REMARK 465 GLY A 988 REMARK 465 GLY A 989 REMARK 465 SER A 990 REMARK 465 GLY A 991 REMARK 465 GLY A 992 REMARK 465 GLY A 993 REMARK 465 GLY A 994 REMARK 465 GLY A 995 REMARK 465 SER A 996 REMARK 465 SER A 997 REMARK 465 GLY A 998 REMARK 465 SER A 999 REMARK 465 SER A 1000 REMARK 465 ALA A 1001 REMARK 465 ASP A 1002 REMARK 465 ASP A 1052 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 PHE B 3 REMARK 465 PHE B 4 REMARK 465 PRO B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 LEU B 8 REMARK 465 LEU B 9 REMARK 465 VAL B 10 REMARK 465 LEU B 11 REMARK 465 PHE B 12 REMARK 465 PHE B 13 REMARK 465 ALA B 14 REMARK 465 GLU B 15 REMARK 465 LYS B 16 REMARK 465 ILE B 17 REMARK 465 ALA B 18 REMARK 465 PHE B 19 REMARK 465 ALA B 20 REMARK 465 GLU B 21 REMARK 465 ASN B 22 REMARK 465 SER B 23 REMARK 465 ASP B 24 REMARK 465 GLN B 25 REMARK 465 THR B 26 REMARK 465 VAL B 27 REMARK 465 SER B 28 REMARK 465 ARG B 29 REMARK 465 VAL B 30 REMARK 465 ASP B 31 REMARK 465 SER B 32 REMARK 465 ASN B 33 REMARK 465 ARG B 34 REMARK 465 TYR B 35 REMARK 465 SER B 36 REMARK 465 VAL B 37 REMARK 465 ALA B 38 REMARK 465 ALA B 39 REMARK 465 SER B 978 REMARK 465 SER B 979 REMARK 465 SER B 980 REMARK 465 GLY B 981 REMARK 465 GLY B 982 REMARK 465 GLY B 983 REMARK 465 GLY B 984 REMARK 465 SER B 985 REMARK 465 GLY B 986 REMARK 465 GLY B 987 REMARK 465 GLY B 988 REMARK 465 GLY B 989 REMARK 465 SER B 990 REMARK 465 GLY B 991 REMARK 465 GLY B 992 REMARK 465 GLY B 993 REMARK 465 GLY B 994 REMARK 465 GLY B 995 REMARK 465 SER B 996 REMARK 465 SER B 997 REMARK 465 GLY B 998 REMARK 465 SER B 999 REMARK 465 SER B 1000 REMARK 465 ALA B 1001 REMARK 465 ASP B 1002 REMARK 465 ASP B 1052 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 101 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 TYR A 133 O - C - N ANGL. DEV. = -11.2 DEGREES REMARK 500 LEU A 134 N - CA - CB ANGL. DEV. = 15.5 DEGREES REMARK 500 LEU A 134 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 VAL A 228 CB - CA - C ANGL. DEV. = -11.5 DEGREES REMARK 500 ARG A 238 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 238 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 387 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 387 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 405 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 405 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 PRO B 157 C - N - CA ANGL. DEV. = 26.0 DEGREES REMARK 500 PRO B 157 C - N - CD ANGL. DEV. = -33.3 DEGREES REMARK 500 ARG B 238 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 238 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG B 251 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 387 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 387 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 49 130.70 -37.49 REMARK 500 LEU A 134 120.86 93.69 REMARK 500 PHE A 168 41.28 -106.21 REMARK 500 SER A 176 -0.13 85.60 REMARK 500 GLU A 227 -164.67 -104.10 REMARK 500 ARG A 291 -124.91 -131.09 REMARK 500 ARG A 292 -123.24 50.03 REMARK 500 ALA A 297 12.95 -147.90 REMARK 500 LYS A 298 20.16 -164.05 REMARK 500 GLN A 355 -129.55 60.75 REMARK 500 GLU A 411 71.43 -157.73 REMARK 500 THR A 413 45.81 -109.01 REMARK 500 ASN B 49 128.02 -36.51 REMARK 500 SER B 74 -133.06 -72.88 REMARK 500 ARG B 87 71.67 26.17 REMARK 500 HIS B 90 -13.20 72.05 REMARK 500 GLU B 124 -18.69 145.06 REMARK 500 PRO B 156 162.48 -45.06 REMARK 500 PRO B 157 -34.09 41.16 REMARK 500 PHE B 168 41.00 -107.41 REMARK 500 SER B 176 -2.28 87.03 REMARK 500 GLU B 227 -165.01 -103.71 REMARK 500 ARG B 291 -126.31 -127.48 REMARK 500 ARG B 292 -124.20 48.92 REMARK 500 ASN B 343 -155.06 61.32 REMARK 500 ASP B 353 65.48 -69.73 REMARK 500 GLN B 355 -129.57 55.94 REMARK 500 GLU B 411 71.56 -156.07 REMARK 500 THR B 413 44.47 -108.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 156 PRO B 157 -125.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 WE MADE A DOUBLE MUTANT OF CEPOFUT2. THIS WAS R298K-R299K. REMARK 999 THE NUMBERING OF HSTSR1 IN THE PDB DOES NOT CORRESPOND REMARK 999 WITH ITS NUMBERING IN THE HUMAN THROMBOSPONDIN 1. HOWEVER, REMARK 999 THIS IS EXPLAINED IN THE MANUSCRIPT, WHICH IS ALMOST REMARK 999 ACCEPTED. DBREF 5FOE A 1 424 UNP Q8WR51 OFUT2_CAEEL 1 424 DBREF 5FOE A 1001 1052 UNP P07996 TSP1_HUMAN 378 429 DBREF 5FOE B 1 424 UNP Q8WR51 OFUT2_CAEEL 1 424 DBREF 5FOE B 1001 1052 UNP P07996 TSP1_HUMAN 378 429 SEQADV 5FOE LYS A 298 UNP Q8WR51 ARG 298 ENGINEERED MUTATION SEQADV 5FOE LYS A 299 UNP Q8WR51 ARG 299 ENGINEERED MUTATION SEQADV 5FOE SER A 425 UNP Q8WR51 LINKER SEQADV 5FOE SER A 426 UNP Q8WR51 LINKER SEQADV 5FOE SER A 979 UNP Q8WR51 LINKER SEQADV 5FOE SER A 980 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 981 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 982 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 983 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 984 UNP Q8WR51 LINKER SEQADV 5FOE SER A 985 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 986 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 987 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 988 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 989 UNP Q8WR51 LINKER SEQADV 5FOE SER A 990 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 991 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 992 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 993 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 994 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 995 UNP Q8WR51 LINKER SEQADV 5FOE SER A 996 UNP Q8WR51 LINKER SEQADV 5FOE SER A 997 UNP Q8WR51 LINKER SEQADV 5FOE GLY A 998 UNP Q8WR51 LINKER SEQADV 5FOE SER A 999 UNP Q8WR51 LINKER SEQADV 5FOE SER A 1000 UNP Q8WR51 LINKER SEQADV 5FOE LYS B 298 UNP Q8WR51 ARG 298 ENGINEERED MUTATION SEQADV 5FOE LYS B 299 UNP Q8WR51 ARG 299 ENGINEERED MUTATION SEQADV 5FOE SER B 425 UNP Q8WR51 LINKER SEQADV 5FOE SER B 978 UNP Q8WR51 LINKER SEQADV 5FOE SER B 979 UNP Q8WR51 LINKER SEQADV 5FOE SER B 980 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 981 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 982 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 983 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 984 UNP Q8WR51 LINKER SEQADV 5FOE SER B 985 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 986 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 987 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 988 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 989 UNP Q8WR51 LINKER SEQADV 5FOE SER B 990 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 991 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 992 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 993 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 994 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 995 UNP Q8WR51 LINKER SEQADV 5FOE SER B 996 UNP Q8WR51 LINKER SEQADV 5FOE SER B 997 UNP Q8WR51 LINKER SEQADV 5FOE GLY B 998 UNP Q8WR51 LINKER SEQADV 5FOE SER B 999 UNP Q8WR51 LINKER SEQADV 5FOE SER B 1000 UNP Q8WR51 LINKER SEQRES 1 A 500 MET HIS PHE PHE PRO ILE GLN LEU LEU VAL LEU PHE PHE SEQRES 2 A 500 ALA GLU LYS ILE ALA PHE ALA GLU ASN SER ASP GLN THR SEQRES 3 A 500 VAL SER ARG VAL ASP SER ASN ARG TYR SER VAL ALA ALA SEQRES 4 A 500 GLU LYS LYS PHE LEU LEU TYR ASP VAL ASN PHE GLY GLU SEQRES 5 A 500 GLY PHE ASN LEU ARG ARG ASP VAL TYR MET ARG VAL ALA SEQRES 6 A 500 ASN THR VAL ARG SER LEU ARG ASP SER GLY GLU ASN TYR SEQRES 7 A 500 ILE LEU VAL LEU PRO PRO TRP GLY ARG LEU HIS HIS TRP SEQRES 8 A 500 LYS ARG MET GLU VAL ALA LEU SER TRP ARG LEU PHE PHE SEQRES 9 A 500 ASP LEU GLU SER LEU ASN ARG PHE ILE PRO VAL ILE GLU SEQRES 10 A 500 PHE GLU ASP PHE LEU ASP GLU ASN ARG PRO ILE ASP GLN SEQRES 11 A 500 VAL ILE TYR LEU GLN HIS TYR ALA GLU GLY TRP GLY THR SEQRES 12 A 500 GLU TYR VAL ARG LYS PHE GLU LYS ARG SER CYS LEU PRO SEQRES 13 A 500 PRO ALA GLU SER HIS TYR LYS GLN VAL GLU GLU PHE LYS SEQRES 14 A 500 TRP LYS GLY TRP PHE TYR SER TYR GLU ASP VAL TYR SER SEQRES 15 A 500 ARG ASN PHE GLN CYS VAL SER ILE GLN GLY ASP SER GLY SEQRES 16 A 500 THR LEU LYS ASP LEU LEU LYS HIS SER ASN PHE SER GLU SEQRES 17 A 500 SER THR SER ILE MET VAL ASP ARG ALA GLU THR ILE LEU SEQRES 18 A 500 HIS GLU HIS TYR GLY GLU VAL ASP TYR TRP LYS ALA ARG SEQRES 19 A 500 ARG SER MET ARG TYR SER ASN ASP LEU VAL ASP VAL ALA SEQRES 20 A 500 ASP ALA PHE ARG LYS LYS TYR LEU ASP SER ASP ASP LYS SEQRES 21 A 500 ARG ASP LYS THR LYS LEU VAL ASP ASP TRP THR LYS GLU SEQRES 22 A 500 LYS PRO ARG ARG THR ALA ILE GLY GLY PRO TYR LEU GLY SEQRES 23 A 500 ILE HIS TRP ARG ARG ARG ASP PHE LEU TYR ALA LYS LYS SEQRES 24 A 500 ALA GLN LEU PRO THR ILE PRO GLY THR ALA LYS ILE LEU SEQRES 25 A 500 GLN ASP LEU CYS LYS LYS LEU ASP LEU GLN LYS ILE TYR SEQRES 26 A 500 LEU ALA THR ASP ALA PRO ASP GLN GLU VAL ASP GLU LEU SEQRES 27 A 500 LYS ALA LEU LEU ASN GLY GLU LEU GLU VAL TYR ARG PHE SEQRES 28 A 500 THR ASP THR GLN LYS LEU ASN ASP GLY GLN ILE ALA ILE SEQRES 29 A 500 ILE ASP GLN TYR LEU CYS ALA HIS ALA ALA TYR PHE ILE SEQRES 30 A 500 GLY SER TYR GLU SER THR PHE THR PHE ARG ILE GLN GLU SEQRES 31 A 500 ASP ARG GLU ILE ILE GLY PHE PRO ILE SER THR THR PHE SEQRES 32 A 500 ASN ARG LEU CYS PRO ASP THR GLU PRO THR CYS GLU GLN SEQRES 33 A 500 PRO ALA LYS TRP LYS ILE VAL TYR SER SER SER SER GLY SEQRES 34 A 500 GLY GLY GLY SER GLY GLY GLY GLY SER GLY GLY GLY GLY SEQRES 35 A 500 GLY SER SER GLY SER SER ALA ASP ASP GLY TRP SER PRO SEQRES 36 A 500 TRP SER GLU TRP THR SER CYS SER THR SER CYS GLY ASN SEQRES 37 A 500 GLY ILE GLN GLN ARG GLY ARG SER CYS ASP SER LEU ASN SEQRES 38 A 500 ASN ARG CYS GLU GLY SER SER VAL GLN THR ARG THR CYS SEQRES 39 A 500 HIS ILE GLN GLU CYS ASP SEQRES 1 B 500 MET HIS PHE PHE PRO ILE GLN LEU LEU VAL LEU PHE PHE SEQRES 2 B 500 ALA GLU LYS ILE ALA PHE ALA GLU ASN SER ASP GLN THR SEQRES 3 B 500 VAL SER ARG VAL ASP SER ASN ARG TYR SER VAL ALA ALA SEQRES 4 B 500 GLU LYS LYS PHE LEU LEU TYR ASP VAL ASN PHE GLY GLU SEQRES 5 B 500 GLY PHE ASN LEU ARG ARG ASP VAL TYR MET ARG VAL ALA SEQRES 6 B 500 ASN THR VAL ARG SER LEU ARG ASP SER GLY GLU ASN TYR SEQRES 7 B 500 ILE LEU VAL LEU PRO PRO TRP GLY ARG LEU HIS HIS TRP SEQRES 8 B 500 LYS ARG MET GLU VAL ALA LEU SER TRP ARG LEU PHE PHE SEQRES 9 B 500 ASP LEU GLU SER LEU ASN ARG PHE ILE PRO VAL ILE GLU SEQRES 10 B 500 PHE GLU ASP PHE LEU ASP GLU ASN ARG PRO ILE ASP GLN SEQRES 11 B 500 VAL ILE TYR LEU GLN HIS TYR ALA GLU GLY TRP GLY THR SEQRES 12 B 500 GLU TYR VAL ARG LYS PHE GLU LYS ARG SER CYS LEU PRO SEQRES 13 B 500 PRO ALA GLU SER HIS TYR LYS GLN VAL GLU GLU PHE LYS SEQRES 14 B 500 TRP LYS GLY TRP PHE TYR SER TYR GLU ASP VAL TYR SER SEQRES 15 B 500 ARG ASN PHE GLN CYS VAL SER ILE GLN GLY ASP SER GLY SEQRES 16 B 500 THR LEU LYS ASP LEU LEU LYS HIS SER ASN PHE SER GLU SEQRES 17 B 500 SER THR SER ILE MET VAL ASP ARG ALA GLU THR ILE LEU SEQRES 18 B 500 HIS GLU HIS TYR GLY GLU VAL ASP TYR TRP LYS ALA ARG SEQRES 19 B 500 ARG SER MET ARG TYR SER ASN ASP LEU VAL ASP VAL ALA SEQRES 20 B 500 ASP ALA PHE ARG LYS LYS TYR LEU ASP SER ASP ASP LYS SEQRES 21 B 500 ARG ASP LYS THR LYS LEU VAL ASP ASP TRP THR LYS GLU SEQRES 22 B 500 LYS PRO ARG ARG THR ALA ILE GLY GLY PRO TYR LEU GLY SEQRES 23 B 500 ILE HIS TRP ARG ARG ARG ASP PHE LEU TYR ALA LYS LYS SEQRES 24 B 500 ALA GLN LEU PRO THR ILE PRO GLY THR ALA LYS ILE LEU SEQRES 25 B 500 GLN ASP LEU CYS LYS LYS LEU ASP LEU GLN LYS ILE TYR SEQRES 26 B 500 LEU ALA THR ASP ALA PRO ASP GLN GLU VAL ASP GLU LEU SEQRES 27 B 500 LYS ALA LEU LEU ASN GLY GLU LEU GLU VAL TYR ARG PHE SEQRES 28 B 500 THR ASP THR GLN LYS LEU ASN ASP GLY GLN ILE ALA ILE SEQRES 29 B 500 ILE ASP GLN TYR LEU CYS ALA HIS ALA ALA TYR PHE ILE SEQRES 30 B 500 GLY SER TYR GLU SER THR PHE THR PHE ARG ILE GLN GLU SEQRES 31 B 500 ASP ARG GLU ILE ILE GLY PHE PRO ILE SER THR THR PHE SEQRES 32 B 500 ASN ARG LEU CYS PRO ASP THR GLU PRO THR CYS GLU GLN SEQRES 33 B 500 PRO ALA LYS TRP LYS ILE VAL TYR SER SER SER SER GLY SEQRES 34 B 500 GLY GLY GLY SER GLY GLY GLY GLY SER GLY GLY GLY GLY SEQRES 35 B 500 GLY SER SER GLY SER SER ALA ASP ASP GLY TRP SER PRO SEQRES 36 B 500 TRP SER GLU TRP THR SER CYS SER THR SER CYS GLY ASN SEQRES 37 B 500 GLY ILE GLN GLN ARG GLY ARG SER CYS ASP SER LEU ASN SEQRES 38 B 500 ASN ARG CYS GLU GLY SER SER VAL GLN THR ARG THR CYS SEQRES 39 B 500 HIS ILE GLN GLU CYS ASP MODRES 5FOE ASN A 205 ASN GLYCOSYLATION SITE MODRES 5FOE ASN B 205 ASN GLYCOSYLATION SITE HET NAG A1427 14 HET GDP A1428 28 HET EDO A1429 4 HET EDO A1430 4 HET EDO A1431 4 HET EDO A1432 4 HET EDO A1433 4 HET GDP B1426 28 HET NAG B1427 14 HET EDO B1428 4 HET EDO B1429 4 HET EDO B1430 4 HET EDO B1431 4 HET EDO B1432 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 GDP 2(C10 H15 N5 O11 P2) FORMUL 5 EDO 10(C2 H6 O2) FORMUL 17 HOH *531(H2 O) HELIX 1 1 GLY A 53 SER A 74 1 22 HELIX 2 2 SER A 99 PHE A 103 5 5 HELIX 3 3 ASP A 105 ILE A 113 1 9 HELIX 4 4 PHE A 118 GLU A 124 1 7 HELIX 5 5 PRO A 157 TYR A 162 1 6 HELIX 6 6 TRP A 173 TYR A 177 5 5 HELIX 7 7 ASP A 193 HIS A 203 1 11 HELIX 8 8 SER A 204 SER A 207 5 4 HELIX 9 9 ARG A 216 ILE A 220 5 5 HELIX 10 10 GLU A 227 SER A 236 1 10 HELIX 11 11 SER A 240 ASP A 256 1 17 HELIX 12 12 ASP A 258 LYS A 263 1 6 HELIX 13 13 ASP A 269 GLU A 273 5 5 HELIX 14 14 ARG A 291 ALA A 297 5 7 HELIX 15 15 LYS A 298 LEU A 302 5 5 HELIX 16 16 THR A 304 ASP A 320 1 17 HELIX 17 17 PRO A 331 LEU A 341 1 11 HELIX 18 18 ASN A 358 HIS A 372 1 15 HELIX 19 19 SER A 382 GLY A 396 1 15 HELIX 20 20 PRO A 398 THR A 402 5 5 HELIX 21 21 GLY B 53 SER B 74 1 22 HELIX 22 22 SER B 99 PHE B 103 5 5 HELIX 23 23 ASP B 105 ARG B 111 1 7 HELIX 24 24 PHE B 118 ASP B 123 1 6 HELIX 25 25 PRO B 157 TYR B 162 1 6 HELIX 26 26 TRP B 173 TYR B 177 5 5 HELIX 27 27 ASP B 193 LYS B 202 1 10 HELIX 28 28 HIS B 203 SER B 207 5 5 HELIX 29 29 ARG B 216 ILE B 220 5 5 HELIX 30 30 GLU B 227 SER B 236 1 10 HELIX 31 31 SER B 240 ASP B 256 1 17 HELIX 32 32 ASP B 258 LYS B 263 1 6 HELIX 33 33 ASP B 269 GLU B 273 5 5 HELIX 34 34 ARG B 292 LYS B 298 1 7 HELIX 35 35 LYS B 299 LEU B 302 5 4 HELIX 36 36 THR B 304 ASP B 320 1 17 HELIX 37 37 PRO B 331 ALA B 340 1 10 HELIX 38 38 ASN B 358 HIS B 372 1 15 HELIX 39 39 SER B 382 GLY B 396 1 15 HELIX 40 40 PRO B 398 THR B 402 5 5 SHEET 1 AA 6 VAL A 115 GLU A 117 0 SHEET 2 AA 6 ASN A 77 LEU A 82 1 O LEU A 80 N ILE A 116 SHEET 3 AA 6 LYS A 41 TYR A 46 1 O LYS A 42 N ILE A 79 SHEET 4 AA 6 SER A 211 VAL A 214 1 O ILE A 212 N LEU A 45 SHEET 5 AA 6 GLN A 130 ILE A 132 1 O GLN A 130 N MET A 213 SHEET 6 AA 6 PHE A 185 GLN A 186 1 N GLN A 186 O VAL A 131 SHEET 1 AB 2 LYS A 148 LYS A 151 0 SHEET 2 AB 2 VAL A 188 GLN A 191 -1 O SER A 189 N GLU A 150 SHEET 1 AC 2 LYS A 163 GLU A 166 0 SHEET 2 AC 2 LYS A 169 LYS A 171 -1 O LYS A 169 N VAL A 165 SHEET 1 AD 4 GLU A 347 TYR A 349 0 SHEET 2 AD 4 LYS A 323 THR A 328 1 O ILE A 324 N TYR A 349 SHEET 3 AD 4 GLY A 282 TRP A 289 1 O LEU A 285 N TYR A 325 SHEET 4 AD 4 ALA A 373 ILE A 377 1 N ALA A 374 O TYR A 284 SHEET 1 AE 2 ASN A1020 GLY A1026 0 SHEET 2 AE 2 VAL A1041 HIS A1047 -1 O GLN A1042 N ARG A1025 SHEET 1 BA 7 VAL B 115 GLU B 117 0 SHEET 2 BA 7 TYR B 78 LEU B 82 1 O LEU B 80 N ILE B 116 SHEET 3 BA 7 LYS B 42 TYR B 46 1 O LYS B 42 N ILE B 79 SHEET 4 BA 7 SER B 211 ASP B 215 1 O ILE B 212 N LEU B 45 SHEET 5 BA 7 GLN B 130 GLN B 135 1 O GLN B 130 N MET B 213 SHEET 6 BA 7 PHE B 185 GLN B 191 1 O GLN B 186 N TYR B 133 SHEET 7 BA 7 LYS B 148 LYS B 151 -1 O LYS B 148 N GLN B 191 SHEET 1 BB 2 LYS B 163 GLU B 166 0 SHEET 2 BB 2 LYS B 169 LYS B 171 -1 O LYS B 169 N VAL B 165 SHEET 1 BC 4 GLU B 347 TYR B 349 0 SHEET 2 BC 4 LYS B 323 THR B 328 1 O ILE B 324 N TYR B 349 SHEET 3 BC 4 GLY B 282 TRP B 289 1 O LEU B 285 N TYR B 325 SHEET 4 BC 4 ALA B 373 ILE B 377 1 N ALA B 374 O TYR B 284 SHEET 1 BD 2 ASN B1020 GLY B1026 0 SHEET 2 BD 2 VAL B1041 HIS B1047 -1 O GLN B1042 N ARG B1025 SSBOND 1 CYS A 154 CYS A 187 1555 1555 2.07 SSBOND 2 CYS A 407 CYS A 414 1555 1555 2.06 SSBOND 3 CYS A 1014 CYS A 1046 1555 1555 2.07 SSBOND 4 CYS A 1018 CYS A 1051 1555 1555 2.06 SSBOND 5 CYS A 1029 CYS A 1036 1555 1555 2.04 SSBOND 6 CYS B 154 CYS B 187 1555 1555 2.06 SSBOND 7 CYS B 407 CYS B 414 1555 1555 2.07 SSBOND 8 CYS B 1014 CYS B 1046 1555 1555 2.07 SSBOND 9 CYS B 1018 CYS B 1051 1555 1555 2.04 SSBOND 10 CYS B 1029 CYS B 1036 1555 1555 2.04 LINK ND2 ASN A 205 C1 NAG A1427 1555 1555 1.43 LINK ND2 ASN B 205 C1 NAG B1427 1555 1555 1.45 CISPEP 1 PRO A 156 PRO A 157 0 1.11 CRYST1 88.026 67.447 90.411 90.00 116.07 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011360 0.000000 0.005558 0.00000 SCALE2 0.000000 0.014826 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012313 0.00000 MTRIX1 1 -0.997400 -0.072150 0.009094 26.31000 1 MTRIX2 1 -0.071260 0.994500 0.076190 -5.70100 1 MTRIX3 1 -0.014540 0.075340 -0.997100 38.02000 1