HEADER HYDROLASE 12-DEC-15 5FQM TITLE LAST COMMON ANCESTOR OF GRAM NEGATIVE BACTERIA (GNCA) CLASS A BETA- TITLE 2 LACTAMASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GNCA BETA LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET24; SOURCE 9 OTHER_DETAILS: RESURRECTED SEQUENCE, ANCESTRAL RECONSTRUCTED KEYWDS HYDROLASE, PRECAMBRIAN, RESURRECTED BETA-LACTAMASE, GNCA EXPDTA X-RAY DIFFRACTION AUTHOR S.MARTINEZ RODRIGUEZ,J.A.GAVIRA,V.A.RISSO,J.M.SANCHEZ RUIZ REVDAT 3 10-JAN-24 5FQM 1 REMARK REVDAT 2 26-JUL-17 5FQM 1 REVDAT 1 18-JAN-17 5FQM 0 JRNL AUTH V.A.RISSO,S.MARTINEZ-RODRIGUEZ,A.M.CANDEL,D.M.KRUGER, JRNL AUTH 2 D.PANTOJA-UCEDA,M.ORTEGA-MUNOZ,F.SANTOYO-GONZALEZ, JRNL AUTH 3 E.A.GAUCHER,S.C.L.KAMERLIN,M.BRUIX,J.A.GAVIRA, JRNL AUTH 4 J.M.SANCHEZ-RUIZ JRNL TITL DE NOVO ACTIVE SITES FOR RESURRECTED PRECAMBRIAN ENZYMES. JRNL REF NAT COMMUN V. 8 16113 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28719578 JRNL DOI 10.1038/NCOMMS16113 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 59484 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 3112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.0725 - 4.1926 1.00 2877 135 0.1777 0.1856 REMARK 3 2 4.1926 - 3.3320 0.85 2397 158 0.1486 0.1756 REMARK 3 3 3.3320 - 2.9121 1.00 2799 163 0.1688 0.2128 REMARK 3 4 2.9121 - 2.6464 0.90 2542 140 0.1703 0.2102 REMARK 3 5 2.6464 - 2.4570 1.00 2853 107 0.1736 0.1660 REMARK 3 6 2.4570 - 2.3123 1.00 2746 214 0.1729 0.1758 REMARK 3 7 2.3123 - 2.1967 0.80 2233 138 0.1714 0.1777 REMARK 3 8 2.1967 - 2.1011 0.99 2749 215 0.1643 0.2104 REMARK 3 9 2.1011 - 2.0203 0.79 2246 83 0.1663 0.1848 REMARK 3 10 2.0203 - 1.9506 1.00 2264 88 0.1654 0.1692 REMARK 3 11 1.9506 - 1.8897 0.60 1375 76 0.1685 0.1759 REMARK 3 12 1.8897 - 1.8357 0.99 2518 115 0.1771 0.1854 REMARK 3 13 1.8357 - 1.7874 1.00 2824 140 0.1750 0.1908 REMARK 3 14 1.7874 - 1.7438 0.99 2749 173 0.1842 0.2193 REMARK 3 15 1.7438 - 1.7042 1.00 2820 117 0.1895 0.2233 REMARK 3 16 1.7042 - 1.6679 0.99 2790 148 0.1951 0.2490 REMARK 3 17 1.6679 - 1.6346 1.00 2785 176 0.2033 0.2552 REMARK 3 18 1.6346 - 1.6038 1.00 2769 167 0.2125 0.2360 REMARK 3 19 1.6038 - 1.5751 0.99 2789 153 0.2272 0.2453 REMARK 3 20 1.5751 - 1.5484 0.99 2739 151 0.2561 0.2954 REMARK 3 21 1.5484 - 1.5235 0.62 1735 87 0.2483 0.2713 REMARK 3 22 1.5235 - 1.5000 0.99 2773 168 0.2555 0.2744 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2227 REMARK 3 ANGLE : 1.390 3027 REMARK 3 CHIRALITY : 0.057 337 REMARK 3 PLANARITY : 0.007 401 REMARK 3 DIHEDRAL : 15.316 842 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5920 25.2182 -7.1410 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.1035 REMARK 3 T33: 0.1552 T12: 0.0247 REMARK 3 T13: -0.0561 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.1312 L22: 0.1352 REMARK 3 L33: 0.1611 L12: 0.0740 REMARK 3 L13: -0.1863 L23: -0.0159 REMARK 3 S TENSOR REMARK 3 S11: 0.0380 S12: 0.0226 S13: 0.0136 REMARK 3 S21: -0.2764 S22: -0.0030 S23: 0.1268 REMARK 3 S31: -0.1462 S32: -0.0585 S33: 0.0758 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6141 10.4674 6.5647 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.1701 REMARK 3 T33: 0.1016 T12: 0.0661 REMARK 3 T13: -0.0081 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.3053 L22: 0.2579 REMARK 3 L33: 0.1222 L12: 0.2460 REMARK 3 L13: -0.0842 L23: 0.0530 REMARK 3 S TENSOR REMARK 3 S11: -0.1323 S12: -0.1677 S13: 0.0099 REMARK 3 S21: 0.1137 S22: 0.1290 S23: -0.0544 REMARK 3 S31: 0.0562 S32: 0.1377 S33: 0.0067 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1739 15.1488 -0.8701 REMARK 3 T TENSOR REMARK 3 T11: 0.1080 T22: 0.0913 REMARK 3 T33: 0.0904 T12: 0.0068 REMARK 3 T13: 0.0057 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.4545 L22: 0.5211 REMARK 3 L33: 0.3578 L12: -0.2077 REMARK 3 L13: -0.2269 L23: 0.2722 REMARK 3 S TENSOR REMARK 3 S11: -0.0333 S12: -0.0475 S13: -0.0149 REMARK 3 S21: -0.0155 S22: 0.0083 S23: -0.0118 REMARK 3 S31: 0.0281 S32: 0.0330 S33: -0.0020 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9791 21.7045 1.0731 REMARK 3 T TENSOR REMARK 3 T11: 0.0993 T22: 0.1069 REMARK 3 T33: 0.1384 T12: 0.0008 REMARK 3 T13: -0.0039 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 0.1140 L22: 0.1900 REMARK 3 L33: 0.2582 L12: -0.1006 REMARK 3 L13: -0.0916 L23: -0.1288 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: 0.0230 S13: 0.0302 REMARK 3 S21: -0.0672 S22: -0.0179 S23: 0.1517 REMARK 3 S31: -0.0473 S32: -0.1091 S33: 0.1410 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1290065758. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.02 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59525 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 21.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4B88 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M NH4SO4, 0.1M TRIS-HCL PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.11500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 47.11500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.79000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.39500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.11500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.18500 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.11500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.11500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.79000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 47.11500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 70.18500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 47.11500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.39500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2032 O HOH A 2079 1.84 REMARK 500 O HOH A 2095 O HOH A 2194 1.95 REMARK 500 O HOH A 2063 O HOH A 2152 1.96 REMARK 500 O HOH A 2087 O HOH A 2095 1.97 REMARK 500 OE1 GLU A 124 O HOH A 2163 1.99 REMARK 500 O HOH A 2080 O HOH A 2082 2.03 REMARK 500 O HOH A 2158 O HOH A 2159 2.04 REMARK 500 O HOH A 2090 O HOH A 2187 2.05 REMARK 500 O HOH A 2144 O HOH A 2148 2.05 REMARK 500 O HOH A 2218 O HOH A 2219 2.05 REMARK 500 O HOH A 2065 O HOH A 2066 2.05 REMARK 500 O HOH A 2126 O HOH A 2257 2.08 REMARK 500 O HOH A 2042 O HOH A 2046 2.09 REMARK 500 OD2 ASP A 176 O HOH A 2190 2.10 REMARK 500 O HOH A 2261 O HOH A 2262 2.10 REMARK 500 O3 GOL A 1301 O HOH A 2220 2.13 REMARK 500 O HOH A 2175 O HOH A 2176 2.13 REMARK 500 O HOH A 2001 O HOH A 2026 2.14 REMARK 500 OD1 ASP A 50 NH2 ARG A 256 2.16 REMARK 500 O HOH A 2099 O HOH A 2202 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2260 O HOH A 2307 6555 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 -140.05 48.82 REMARK 500 TYR A 105 71.67 30.52 REMARK 500 ARG A 220 -125.23 -108.80 REMARK 500 HIS A 291 60.03 -159.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 291 HIS A 292 127.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2133 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A2311 DISTANCE = 6.20 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1293 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1294 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1295 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1296 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1297 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1304 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THIS ENTRY IS RELEATED TO PDB ENTRIES REMARK 999 4UHU AND 4B88 DBREF 5FQM A 25 296 PDB 5FQM 5FQM 25 296 SEQRES 1 A 269 MET ALA ALA GLN LEU SER GLU GLN LEU ALA GLU LEU GLU SEQRES 2 A 269 LYS ARG SER GLY GLY ARG LEU GLY VAL ALA VAL LEU ASP SEQRES 3 A 269 THR ALA THR GLY ARG ARG ILE ALA TYR ARG GLY ASP GLU SEQRES 4 A 269 ARG PHE PRO MET CYS SER THR PHE LYS ALA LEU LEU ALA SEQRES 5 A 269 ALA ALA VAL LEU ALA ARG VAL ASP GLN GLY LYS GLU ARG SEQRES 6 A 269 LEU ASP ARG ARG ILE THR TYR GLY LYS GLU ASP LEU VAL SEQRES 7 A 269 ASP TYR SER PRO VAL THR GLU LYS HIS VAL GLY ASP GLY SEQRES 8 A 269 MET THR VAL ALA GLU LEU CYS GLU ALA ALA ILE THR LEU SEQRES 9 A 269 SER ASP ASN THR ALA ALA ASN LEU LEU LEU GLU ALA LEU SEQRES 10 A 269 GLY GLY PRO ALA ALA LEU THR ALA PHE LEU ARG SER ILE SEQRES 11 A 269 GLY ASP GLU VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 A 269 LEU ASN GLU ALA ALA PRO GLY ASP PRO ARG ASP THR THR SEQRES 13 A 269 THR PRO ALA ALA MET ALA ALA THR LEU ARG THR LEU LEU SEQRES 14 A 269 LEU GLY ASP ALA LEU SER PRO ALA SER ARG GLN GLN LEU SEQRES 15 A 269 VAL ASP TRP LEU VAL ALA ASN LYS THR GLY ASP LYS ARG SEQRES 16 A 269 LEU ARG ALA GLY LEU PRO ALA ASP TRP ARG VAL GLY ASP SEQRES 17 A 269 LYS THR GLY THR GLY GLY HIS GLY THR THR ASN ASP ILE SEQRES 18 A 269 ALA VAL ILE TRP PRO PRO GLY ARG ALA PRO ILE VAL VAL SEQRES 19 A 269 THR VAL TYR LEU THR GLU SER GLN VAL ASP ALA ASP ALA SEQRES 20 A 269 ARG ASP ALA VAL ILE ALA GLU VAL GLY ARG LEU VAL VAL SEQRES 21 A 269 GLU ALA PHE HIS HIS HIS HIS HIS HIS HET SO4 A1293 5 HET GOL A1294 6 HET GOL A1295 6 HET GOL A1296 6 HET GOL A1297 6 HET GOL A1298 6 HET GOL A1299 6 HET GOL A1300 6 HET GOL A1301 6 HET GOL A1302 6 HET GOL A1303 6 HET GOL A1304 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 O4 S 2- FORMUL 3 GOL 11(C3 H8 O3) FORMUL 14 HOH *311(H2 O) HELIX 1 1 GLN A 28 ARG A 39 1 12 HELIX 2 2 THR A 71 GLN A 86 1 16 HELIX 3 3 GLY A 98 LEU A 102 5 5 HELIX 4 4 VAL A 108 HIS A 112 5 5 HELIX 5 5 VAL A 119 LEU A 129 1 11 HELIX 6 6 ASP A 131 GLY A 143 1 13 HELIX 7 7 GLY A 144 ILE A 155 1 12 HELIX 8 8 PRO A 167 GLU A 171 5 5 HELIX 9 9 THR A 182 LEU A 195 1 14 HELIX 10 10 SER A 200 ALA A 213 1 14 HELIX 11 11 ARG A 220 LEU A 225 5 6 HELIX 12 12 ASP A 271 HIS A 292 1 22 SHEET 1 AA 5 ARG A 56 TYR A 60 0 SHEET 2 AA 5 ARG A 43 ASP A 50 -1 O VAL A 46 N TYR A 60 SHEET 3 AA 5 ILE A 259 THR A 266 -1 O VAL A 260 N LEU A 49 SHEET 4 AA 5 THR A 243 TRP A 251 -1 O THR A 244 N LEU A 265 SHEET 5 AA 5 ARG A 230 GLY A 238 -1 O ARG A 230 N TRP A 251 SHEET 1 AB 2 PHE A 66 PRO A 67 0 SHEET 2 AB 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AC 2 ARG A 94 ILE A 95 0 SHEET 2 AC 2 MET A 117 THR A 118 -1 O MET A 117 N ILE A 95 CISPEP 1 GLU A 166 PRO A 167 0 3.04 SITE 1 AC1 9 SER A 70 LYS A 88 SER A 130 THR A 235 SITE 2 AC1 9 GLY A 236 THR A 237 HOH A2088 HOH A2146 SITE 3 AC1 9 HOH A2169 SITE 1 AC2 9 GLN A 86 PHE A 151 SER A 154 ILE A 155 SITE 2 AC2 9 GLU A 171 HOH A2196 HOH A2197 HOH A2298 SITE 3 AC2 9 HOH A2299 SITE 1 AC3 4 LYS A 215 THR A 216 GLY A 217 ASP A 218 SITE 1 AC4 3 ARG A 161 GOL A1304 HOH A2302 SITE 1 AC5 7 ILE A 155 GLU A 171 ALA A 173 THR A 192 SITE 2 AC5 7 HIS A 241 HOH A2197 HOH A2303 SITE 1 AC6 10 ARG A 43 ARG A 65 PRO A 67 PRO A 174 SITE 2 AC6 10 GLY A 175 ASP A 176 HOH A2025 HOH A2201 SITE 3 AC6 10 HOH A2304 HOH A2305 SITE 1 AC7 6 ILE A 155 ASP A 157 ALA A 185 ALA A 188 SITE 2 AC7 6 THR A 189 THR A 192 SITE 1 AC8 7 ALA A 120 GLU A 124 GLN A 206 TRP A 210 SITE 2 AC8 7 ASP A 228 HOH A2163 HOH A2307 SITE 1 AC9 11 ASP A 197 SER A 200 PRO A 201 HIS A 241 SITE 2 AC9 11 GLY A 242 SER A 268 GLN A 269 HOH A2220 SITE 3 AC9 11 HOH A2266 HOH A2274 HOH A2308 SITE 1 BC1 10 LEU A 102 VAL A 103 ASP A 104 ALA A 146 SITE 2 BC1 10 ALA A 147 ALA A 150 PRO A 167 HOH A2179 SITE 3 BC1 10 HOH A2180 HOH A2309 SITE 1 BC2 7 ALA A 58 TYR A 60 ARG A 61 GLY A 62 SITE 2 BC2 7 HOH A2004 HOH A2005 HOH A2071 SITE 1 BC3 4 ARG A 153 ARG A 161 ASP A 163 GOL A1296 CRYST1 94.230 94.230 93.580 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010612 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010686 0.00000