HEADER PROTEIN BINDING 17-DEC-15 5FRG TITLE THE NMR STRUCTURE OF THE CDC42-INTERACTING REGION OF TOCA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMIN-BINDING PROTEIN 1-LIKE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HOMOLOGY REGION 1, UNP RESIDUES 330-426; COMPND 5 SYNONYM: TOCA1, TRANSDUCER OF CDC42-DEPENDENT ACTIN ASSEMBLY PROTEIN COMPND 6 1, TOCA-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; SOURCE 3 ORGANISM_COMMON: WESTERN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8364; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS PROTEIN BINDING, FORMIN-BINDING PROTEIN LIKE-1, LIPID-BINDING, CDC42, KEYWDS 2 CYTOSKELETON, ENDOCYTOSIS, HR1, REM, MEMBRANE, PLASMA MEMBRANE, RHO KEYWDS 3 FAMILY, SMALL G PROTEINS EXPDTA SOLUTION NMR NUMMDL 35 AUTHOR J.R.WATSON,D.NIETLISPACH,D.OWEN,H.R.MOTT REVDAT 5 14-JUN-23 5FRG 1 REMARK REVDAT 4 23-OCT-19 5FRG 1 REMARK ATOM REVDAT 3 06-JUL-16 5FRG 1 JRNL REVDAT 2 18-MAY-16 5FRG 1 JRNL REVDAT 1 04-MAY-16 5FRG 0 JRNL AUTH J.R.WATSON,H.M.FOX,D.NIETLISPACH,J.L.GALLOP,D.OWEN,H.R.MOTT JRNL TITL INVESTIGATION OF THE INTERACTION BETWEEN CDC42 AND ITS JRNL TITL 2 EFFECTOR TOCA1: HANDOVER OF CDC42 TO THE ACTIN REGULATOR JRNL TITL 3 N-WASP IS FACILITATED BY DIFFERENTIAL BINDING AFFINITIES. JRNL REF J.BIOL.CHEM. V. 291 13875 2016 JRNL REFN ISSN 0021-9258 JRNL PMID 27129201 JRNL DOI 10.1074/JBC.M116.724294 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA2.3; CNS1.2 CNS1.2 REMARK 3 AUTHORS : W.RIEPING,M.HABECK,B.BARDIAUX,A.BERNARD,T.E. REMARK 3 MALLIAVIN,M.NILGES; A.T.BRUNGER,P.D.ADAMS, REMARK 3 G.M.CLORE, W.L.DELANO,P.GROS,R.W.GROSSE-KUNSTLEVE, REMARK 3 J.S.JIANG, J.KUSZEWSKI,M.NILGES,N.S.PANNU,R.J.READ, REMARK 3 L.M.RICE, T.SIMONSON,G.L.WARREN. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1290065851. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0; 298.0 REMARK 210 PH : 7.4; 7.4 REMARK 210 IONIC STRENGTH : 0.15; 0.15 REMARK 210 PRESSURE : 1.0 ATM; 1.0 ATM REMARK 210 SAMPLE CONTENTS : 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15NHSQC; HN(CO)CA; HN(CO)CACB; REMARK 210 HNCA; HNCACB; HNCO; 15NHSQCNOESY; REMARK 210 NOESY13CHSQC; HCCHTOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.3, CCPNMR ANALYSIS 2.3, REMARK 210 AZARA, CNS 1.2 REMARK 210 METHOD USED : ARIA2.3; CNS 1.2 REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 35 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N TOCA1 HR1 DOMAIN REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 406 HZ1 LYS A 409 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 336 -90.27 -137.88 REMARK 500 1 PRO A 381 -2.99 -54.97 REMARK 500 1 ARG A 424 -159.51 61.98 REMARK 500 2 LEU A 325 -80.04 65.65 REMARK 500 2 HIS A 328 -44.33 -160.63 REMARK 500 2 MET A 329 -76.71 68.78 REMARK 500 2 LYS A 330 -65.45 -173.56 REMARK 500 2 PRO A 332 -72.71 -65.42 REMARK 500 3 LEU A 325 -52.77 71.70 REMARK 500 3 MET A 329 -75.07 -147.99 REMARK 500 3 LYS A 330 -52.58 -134.39 REMARK 500 3 PRO A 332 90.52 -67.58 REMARK 500 3 ASP A 336 -64.74 -168.01 REMARK 500 3 PHE A 337 14.30 51.22 REMARK 500 3 PRO A 381 -3.05 -54.53 REMARK 500 4 GLU A 335 35.60 -146.74 REMARK 500 4 ASP A 336 -138.57 -98.61 REMARK 500 5 HIS A 328 -69.56 -98.87 REMARK 500 5 ALA A 333 46.08 -75.48 REMARK 500 5 GLU A 335 -73.25 74.58 REMARK 500 5 ASP A 336 -58.37 68.92 REMARK 500 5 PRO A 381 -3.61 -53.55 REMARK 500 5 LYS A 420 -92.90 -84.81 REMARK 500 5 GLN A 423 91.07 63.34 REMARK 500 6 SER A 327 -84.18 65.01 REMARK 500 6 HIS A 328 93.30 58.87 REMARK 500 6 LYS A 330 116.75 66.28 REMARK 500 6 GLU A 335 -103.24 55.83 REMARK 500 6 ASP A 336 -76.09 60.87 REMARK 500 6 ARG A 424 61.95 -118.80 REMARK 500 7 ALA A 333 72.42 -109.60 REMARK 500 7 GLU A 335 -86.19 65.53 REMARK 500 7 ASP A 336 -74.31 67.18 REMARK 500 7 ARG A 424 71.54 -158.96 REMARK 500 8 MET A 329 -72.46 70.47 REMARK 500 8 ALA A 333 61.42 -158.99 REMARK 500 8 SER A 425 -151.31 57.25 REMARK 500 9 ASP A 336 -83.25 69.25 REMARK 500 9 PRO A 381 -3.87 -52.83 REMARK 500 9 SER A 425 -170.72 58.02 REMARK 500 10 HIS A 328 -81.02 -78.70 REMARK 500 10 PRO A 381 -5.18 -57.89 REMARK 500 11 PRO A 332 30.77 -88.70 REMARK 500 11 ASP A 336 -53.58 68.71 REMARK 500 11 ARG A 424 48.26 -89.51 REMARK 500 12 PRO A 324 43.25 -77.07 REMARK 500 12 LYS A 330 59.83 -147.53 REMARK 500 12 ALA A 333 73.97 -110.76 REMARK 500 12 ASP A 336 -78.38 61.53 REMARK 500 12 PRO A 381 -2.98 -53.36 REMARK 500 REMARK 500 THIS ENTRY HAS 146 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25945 RELATED DB: BMRB DBREF 5FRG A 330 426 UNP Q6GUF4 FBP1L_XENTR 330 426 SEQADV 5FRG GLY A 323 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG PRO A 324 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG LEU A 325 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG GLY A 326 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG SER A 327 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG HIS A 328 UNP Q6GUF4 EXPRESSION TAG SEQADV 5FRG MET A 329 UNP Q6GUF4 EXPRESSION TAG SEQRES 1 A 104 GLY PRO LEU GLY SER HIS MET LYS GLY PRO ALA LEU GLU SEQRES 2 A 104 ASP PHE SER HIS LEU PRO PRO GLU GLN ARG ARG LYS ARG SEQRES 3 A 104 LEU GLN GLN ARG ILE ASP GLU LEU SER ARG GLU LEU GLN SEQRES 4 A 104 LYS GLU MET ASP GLN LYS ASP ALA LEU ASN LYS MET LYS SEQRES 5 A 104 ASP VAL TYR GLU LYS ASN PRO GLN MET GLY ASP PRO SER SEQRES 6 A 104 SER LEU HIS PRO LYS ILE ALA GLU THR THR SER ASN ILE SEQRES 7 A 104 GLU ARG LEU ARG MET GLU ILE HIS LYS ASN GLU ALA TRP SEQRES 8 A 104 LEU SER GLU VAL GLU GLY LYS VAL SER GLN ARG SER GLU HELIX 1 1 PRO A 342 LYS A 379 1 38 HELIX 2 2 PRO A 381 MET A 383 5 3 HELIX 3 3 PRO A 386 LEU A 389 5 4 HELIX 4 4 LEU A 389 GLU A 418 1 30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1