HEADER TRANSFERASE 12-FEB-16 5FWD TITLE CRYSTAL STRUCTURE OF MUS MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE 2 TITLE 2 WITH CP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGININE N-METHYLTRANSFERASE 2; COMPND 3 CHAIN: A; COMPND 4 EC: 2.1.1.125; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PDEST20 KEYWDS TRANSFERASE, S-ADENOSYL-L-METHIONINE EXPDTA X-RAY DIFFRACTION AUTHOR V.CURA,N.TROFFER-CHARLIER,N.MARECHAL,L.BONNEFOND,J.CAVARELLI REVDAT 3 10-JAN-24 5FWD 1 REMARK LINK REVDAT 2 24-APR-19 5FWD 1 SOURCE REVDAT 1 01-MAR-17 5FWD 0 JRNL AUTH V.CURA,N.MARECHAL,N.TROFFER-CHARLIER,J.M.STRUB, JRNL AUTH 2 M.J.VAN HAREN,N.I.MARTIN,S.CIANFERANI,L.BONNEFOND, JRNL AUTH 3 J.CAVARELLI JRNL TITL STRUCTURAL STUDIES OF PROTEIN ARGININE METHYLTRANSFERASE 2 JRNL TITL 2 REVEAL ITS INTERACTIONS WITH POTENTIAL SUBSTRATES AND JRNL TITL 3 INHIBITORS. JRNL REF FEBS J. V. 284 77 2017 JRNL REFN ISSN 1742-464X JRNL PMID 27879050 JRNL DOI 10.1111/FEBS.13953 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 34075 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2733 - 4.5773 0.99 2832 155 0.1606 0.1701 REMARK 3 2 4.5773 - 3.6337 1.00 2740 141 0.1411 0.1603 REMARK 3 3 3.6337 - 3.1746 1.00 2688 140 0.1707 0.1978 REMARK 3 4 3.1746 - 2.8844 1.00 2697 161 0.1986 0.2173 REMARK 3 5 2.8844 - 2.6777 1.00 2713 126 0.2002 0.2236 REMARK 3 6 2.6777 - 2.5198 1.00 2688 132 0.2065 0.2194 REMARK 3 7 2.5198 - 2.3936 1.00 2687 139 0.2156 0.2670 REMARK 3 8 2.3936 - 2.2895 1.00 2657 150 0.2316 0.2742 REMARK 3 9 2.2895 - 2.2013 1.00 2660 143 0.2448 0.2865 REMARK 3 10 2.2013 - 2.1254 1.00 2667 139 0.2584 0.2801 REMARK 3 11 2.1254 - 2.0589 1.00 2687 145 0.2728 0.3020 REMARK 3 12 2.0589 - 2.0001 1.00 2649 139 0.2840 0.2886 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 44.80 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2857 REMARK 3 ANGLE : 0.699 3873 REMARK 3 CHIRALITY : 0.032 433 REMARK 3 PLANARITY : 0.003 498 REMARK 3 DIHEDRAL : 12.888 1038 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5050 13.1848 -22.8641 REMARK 3 T TENSOR REMARK 3 T11: 0.2006 T22: 0.1973 REMARK 3 T33: 0.2234 T12: 0.0003 REMARK 3 T13: -0.0001 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.8385 L22: 2.0889 REMARK 3 L33: 1.1969 L12: -0.0708 REMARK 3 L13: 0.0900 L23: -0.2542 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: -0.0119 S13: 0.1435 REMARK 3 S21: 0.0878 S22: -0.0043 S23: -0.0144 REMARK 3 S31: -0.1261 S32: 0.1033 S33: 0.0522 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3876 -15.9422 -2.0098 REMARK 3 T TENSOR REMARK 3 T11: 0.3097 T22: 0.2424 REMARK 3 T33: 0.3448 T12: 0.0313 REMARK 3 T13: 0.0393 T23: -0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.7545 L22: 0.7728 REMARK 3 L33: 8.4304 L12: 0.5737 REMARK 3 L13: -2.0707 L23: -2.7456 REMARK 3 S TENSOR REMARK 3 S11: -0.1364 S12: -0.1104 S13: 0.0267 REMARK 3 S21: -0.0699 S22: -0.0667 S23: -0.1472 REMARK 3 S31: 0.4389 S32: 0.1342 S33: 0.2008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3283 -10.5719 -21.1242 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.3108 REMARK 3 T33: 0.2865 T12: 0.0425 REMARK 3 T13: 0.0585 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.3693 L22: 2.2514 REMARK 3 L33: 0.3407 L12: -0.1841 REMARK 3 L13: 0.4199 L23: -0.6394 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: 0.1132 S13: -0.1099 REMARK 3 S21: -0.1770 S22: -0.0885 S23: -0.0945 REMARK 3 S31: 0.1893 S32: 0.1110 S33: 0.1101 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 427 THROUGH 445 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6698 -23.7877 -14.8739 REMARK 3 T TENSOR REMARK 3 T11: 0.2635 T22: 0.2209 REMARK 3 T33: 0.1175 T12: -0.0053 REMARK 3 T13: 0.0171 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 6.3139 L22: 3.0117 REMARK 3 L33: 3.1422 L12: 0.0890 REMARK 3 L13: -1.5400 L23: 0.7587 REMARK 3 S TENSOR REMARK 3 S11: -0.4059 S12: 0.3741 S13: -1.1670 REMARK 3 S21: 0.6043 S22: -0.0869 S23: 0.9303 REMARK 3 S31: 0.2429 S32: -0.0275 S33: 0.4674 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1290066219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 1.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5FUB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG6000, 100 MM HEPES PH7, 100MM REMARK 280 CACL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.04250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.04250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.98200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.26000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.98200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.26000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.04250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.98200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.26000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.04250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.98200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.26000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A1460 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2110 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2267 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 CYS A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 SER A 12 REMARK 465 GLN A 13 REMARK 465 VAL A 14 REMARK 465 ILE A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 GLU A 20 REMARK 465 ASP A 21 REMARK 465 PRO A 22 REMARK 465 VAL A 23 REMARK 465 ASP A 24 REMARK 465 TYR A 25 REMARK 465 GLY A 26 REMARK 465 CYS A 27 REMARK 465 GLU A 28 REMARK 465 MET A 29 REMARK 465 GLN A 30 REMARK 465 LEU A 31 REMARK 465 LEU A 32 REMARK 465 GLN A 33 REMARK 465 ASP A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 GLN A 37 REMARK 465 LEU A 38 REMARK 465 GLN A 39 REMARK 465 LEU A 40 REMARK 465 GLN A 41 REMARK 465 LEU A 42 REMARK 465 GLN A 43 REMARK 465 PRO A 44 REMARK 465 GLU A 45 REMARK 465 GLU A 46 REMARK 465 PHE A 47 REMARK 465 VAL A 48 REMARK 465 ALA A 49 REMARK 465 ILE A 50 REMARK 465 ALA A 51 REMARK 465 ASP A 52 REMARK 465 TYR A 53 REMARK 465 THR A 54 REMARK 465 ALA A 55 REMARK 465 THR A 56 REMARK 465 ASP A 57 REMARK 465 GLU A 58 REMARK 465 THR A 59 REMARK 465 GLN A 60 REMARK 465 LEU A 61 REMARK 465 SER A 62 REMARK 465 PHE A 63 REMARK 465 LEU A 64 REMARK 465 ARG A 65 REMARK 465 GLY A 66 REMARK 465 GLU A 67 REMARK 465 LYS A 68 REMARK 465 ILE A 69 REMARK 465 LEU A 70 REMARK 465 ILE A 71 REMARK 465 LEU A 72 REMARK 465 ARG A 73 REMARK 465 GLN A 74 REMARK 465 THR A 75 REMARK 465 THR A 76 REMARK 465 ALA A 77 REMARK 465 ASP A 78 REMARK 465 TRP A 79 REMARK 465 TRP A 80 REMARK 465 TRP A 81 REMARK 465 GLY A 82 REMARK 465 GLU A 83 REMARK 465 ARG A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 CYS A 87 REMARK 465 CYS A 88 REMARK 465 GLY A 89 REMARK 465 TYR A 90 REMARK 465 ILE A 91 REMARK 465 PRO A 92 REMARK 465 ALA A 93 REMARK 465 ASN A 94 REMARK 465 HIS A 95 REMARK 465 LEU A 96 REMARK 465 GLY A 97 REMARK 465 LYS A 98 REMARK 465 GLN A 99 REMARK 465 LEU A 100 REMARK 465 GLU A 101 REMARK 465 GLU A 102 REMARK 465 TYR A 103 REMARK 465 ASP A 104 REMARK 465 PRO A 105 REMARK 465 GLU A 106 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2119 O HOH A 2246 1.85 REMARK 500 O HOH A 2083 O HOH A 2084 1.86 REMARK 500 OH TYR A 270 O HOH A 2157 1.88 REMARK 500 O HOH A 2123 O HOH A 2228 1.89 REMARK 500 O HOH A 2252 O HOH A 2257 1.94 REMARK 500 O HOH A 2065 O HOH A 2066 1.96 REMARK 500 O HOH A 2004 O HOH A 2005 1.98 REMARK 500 O HOH A 2134 O HOH A 2142 2.05 REMARK 500 O HOH A 2084 O HOH A 2144 2.08 REMARK 500 O HOH A 2002 O HOH A 2036 2.12 REMARK 500 OE2 GLU A 332 O HOH A 2195 2.14 REMARK 500 OH TYR A 240 O HOH A 2102 2.15 REMARK 500 OD1 ASP A 107 O HOH A 2005 2.16 REMARK 500 O PHE A 276 O HOH A 2159 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 229 -51.26 69.91 REMARK 500 GLU A 232 -31.35 82.28 REMARK 500 ALA A 266 55.85 -144.96 REMARK 500 ASN A 279 59.70 -143.42 REMARK 500 LYS A 383 -135.38 51.99 REMARK 500 VAL A 412 -63.22 -106.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2138 DISTANCE = 6.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1455 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 196 O REMARK 620 2 ASP A 199 OD2 140.9 REMARK 620 3 ASP A 199 OD1 86.3 55.0 REMARK 620 4 HOH A2087 O 72.1 141.2 140.8 REMARK 620 5 HOH A2089 O 101.5 84.1 88.2 65.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1460 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2037 O REMARK 620 2 HOH A2037 O 154.9 REMARK 620 3 HOH A2040 O 127.2 75.4 REMARK 620 4 HOH A2040 O 75.5 127.4 70.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GJV A 1446 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1452 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1453 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1454 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1455 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1460 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FWA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A METHYLTRANSFERASE REMARK 999 REMARK 999 SEQUENCE REMARK 999 G0 COMES FROM THE TEV CLEAVAGE SITE. MUTATION R445W DBREF 5FWD A 1 445 UNP Q3UKX1 Q3UKX1_MOUSE 1 445 SEQADV 5FWD GLY A 0 UNP Q3UKX1 EXPRESSION TAG SEQADV 5FWD TRP A 445 UNP Q3UKX1 ARG 445 ENGINEERED MUTATION SEQRES 1 A 446 GLY MET GLU ALA PRO GLY GLU GLY PRO CYS SER GLU SER SEQRES 2 A 446 GLN VAL ILE PRO VAL LEU GLU GLU ASP PRO VAL ASP TYR SEQRES 3 A 446 GLY CYS GLU MET GLN LEU LEU GLN ASP GLY ALA GLN LEU SEQRES 4 A 446 GLN LEU GLN LEU GLN PRO GLU GLU PHE VAL ALA ILE ALA SEQRES 5 A 446 ASP TYR THR ALA THR ASP GLU THR GLN LEU SER PHE LEU SEQRES 6 A 446 ARG GLY GLU LYS ILE LEU ILE LEU ARG GLN THR THR ALA SEQRES 7 A 446 ASP TRP TRP TRP GLY GLU ARG ALA GLY CYS CYS GLY TYR SEQRES 8 A 446 ILE PRO ALA ASN HIS LEU GLY LYS GLN LEU GLU GLU TYR SEQRES 9 A 446 ASP PRO GLU ASP THR TRP GLN ASP GLU GLU TYR PHE ASP SEQRES 10 A 446 SER TYR GLY THR LEU LYS LEU HIS LEU GLU MET LEU ALA SEQRES 11 A 446 ASP GLN PRO ARG THR THR LYS TYR HIS SER VAL ILE LEU SEQRES 12 A 446 GLN ASN LYS GLU SER LEU LYS ASP LYS VAL ILE LEU ASP SEQRES 13 A 446 VAL GLY CYS GLY THR GLY ILE ILE SER LEU PHE CYS ALA SEQRES 14 A 446 HIS HIS ALA ARG PRO LYS ALA VAL TYR ALA VAL GLU ALA SEQRES 15 A 446 SER ASP MET ALA GLN HIS THR SER GLN LEU VAL LEU GLN SEQRES 16 A 446 ASN GLY PHE ALA ASP THR ILE THR VAL PHE GLN GLN LYS SEQRES 17 A 446 VAL GLU ASP VAL VAL LEU PRO GLU LYS VAL ASP VAL LEU SEQRES 18 A 446 VAL SER GLU TRP MET GLY THR CYS LEU LEU PHE GLU PHE SEQRES 19 A 446 MET ILE GLU SER ILE LEU TYR ALA ARG ASP THR TRP LEU SEQRES 20 A 446 LYS GLY ASP GLY ILE ILE TRP PRO THR THR ALA ALA LEU SEQRES 21 A 446 HIS LEU VAL PRO CYS SER ALA GLU LYS ASP TYR HIS SER SEQRES 22 A 446 LYS VAL LEU PHE TRP ASP ASN ALA TYR GLU PHE ASN LEU SEQRES 23 A 446 SER ALA LEU LYS SER LEU ALA ILE LYS GLU PHE PHE SER SEQRES 24 A 446 ARG PRO LYS SER ASN HIS ILE LEU LYS PRO GLU ASP CYS SEQRES 25 A 446 LEU SER GLU PRO CYS THR ILE LEU GLN LEU ASP MET ARG SEQRES 26 A 446 THR VAL GLN VAL PRO ASP LEU GLU THR MET ARG GLY GLU SEQRES 27 A 446 LEU ARG PHE ASP ILE GLN LYS ALA GLY THR LEU HIS GLY SEQRES 28 A 446 PHE THR ALA TRP PHE SER VAL TYR PHE GLN SER LEU GLU SEQRES 29 A 446 GLU GLY GLN PRO GLN GLN VAL LEU SER THR GLY PRO LEU SEQRES 30 A 446 HIS PRO THR THR HIS TRP LYS GLN THR LEU PHE MET MET SEQRES 31 A 446 ASP ASP PRO VAL PRO VAL HIS THR GLY ASP VAL VAL THR SEQRES 32 A 446 GLY SER VAL VAL LEU GLN ARG ASN PRO VAL TRP ARG ARG SEQRES 33 A 446 HIS MET SER VAL SER LEU SER TRP VAL VAL THR SER ALA SEQRES 34 A 446 LEU ASP PRO THR SER GLN ARG VAL GLY GLU LYS VAL PHE SEQRES 35 A 446 PRO ILE TRP TRP HET GJV A1446 24 HET PG4 A1447 13 HET EDO A1448 4 HET EDO A1449 4 HET EDO A1450 4 HET EDO A1451 4 HET EDO A1452 4 HET EDO A1453 4 HET CL A1454 1 HET CA A1455 1 HET CA A1460 1 HETNAM GJV 9-(7-{[AMINO(IMINIO)METHYL]AMINO}-5,6,7-TRIDEOXY-BETA- HETNAM 2 GJV D-RIBO-HEPTOFURANOSYL)-9H-PURIN-6-AMINE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GJV C13 H21 N8 O3 1+ FORMUL 3 PG4 C8 H18 O5 FORMUL 4 EDO 6(C2 H6 O2) FORMUL 10 CL CL 1- FORMUL 11 CA 2(CA 2+) FORMUL 13 HOH *268(H2 O) HELIX 1 1 GLN A 110 TYR A 118 1 9 HELIX 2 2 THR A 120 ALA A 129 1 10 HELIX 3 3 ASP A 130 ASN A 144 1 15 HELIX 4 4 GLY A 161 ALA A 171 1 11 HELIX 5 5 ASP A 183 ASN A 195 1 13 HELIX 6 6 MET A 234 TRP A 245 1 12 HELIX 7 7 ALA A 266 VAL A 274 1 9 HELIX 8 8 LEU A 275 ASP A 278 5 4 HELIX 9 9 LEU A 285 ALA A 287 5 3 HELIX 10 10 LEU A 288 SER A 298 1 11 HELIX 11 11 LYS A 307 ASP A 310 5 4 HELIX 12 12 GLN A 327 LEU A 331 5 5 SHEET 1 AA 5 ILE A 201 PHE A 204 0 SHEET 2 AA 5 ALA A 175 VAL A 179 1 O VAL A 176 N THR A 202 SHEET 3 AA 5 VAL A 152 VAL A 156 1 O ILE A 153 N TYR A 177 SHEET 4 AA 5 VAL A 217 SER A 222 1 N ASP A 218 O VAL A 152 SHEET 5 AA 5 LEU A 246 TRP A 253 1 N LYS A 247 O VAL A 217 SHEET 1 AB 4 LYS A 301 HIS A 304 0 SHEET 2 AB 4 GLN A 384 VAL A 395 -1 O GLN A 384 N HIS A 304 SHEET 3 AB 4 GLY A 346 PHE A 359 -1 O GLY A 346 N VAL A 395 SHEET 4 AB 4 GLN A 369 SER A 372 -1 O GLN A 369 N PHE A 359 SHEET 1 AC 5 LYS A 301 HIS A 304 0 SHEET 2 AC 5 GLN A 384 VAL A 395 -1 O GLN A 384 N HIS A 304 SHEET 3 AC 5 GLY A 346 PHE A 359 -1 O GLY A 346 N VAL A 395 SHEET 4 AC 5 THR A 256 CYS A 264 -1 O THR A 256 N TYR A 358 SHEET 5 AC 5 CYS A 316 ASP A 322 -1 O CYS A 316 N LEU A 261 SHEET 1 AD 2 GLN A 369 SER A 372 0 SHEET 2 AD 2 GLY A 346 PHE A 359 -1 O VAL A 357 N LEU A 371 SHEET 1 AE 4 THR A 333 ASP A 341 0 SHEET 2 AE 4 VAL A 400 ARG A 409 -1 O VAL A 401 N PHE A 340 SHEET 3 AE 4 MET A 417 THR A 426 -1 O SER A 418 N GLN A 408 SHEET 4 AE 4 GLN A 434 ILE A 443 -1 O ARG A 435 N VAL A 425 LINK O GLY A 196 CA CA A1455 1555 1555 2.73 LINK OD2 ASP A 199 CA CA A1455 1555 1555 2.40 LINK OD1 ASP A 199 CA CA A1455 1555 1555 2.36 LINK CA CA A1455 O HOH A2087 1555 1555 2.70 LINK CA CA A1455 O HOH A2089 1555 1555 2.33 LINK CA CA A1460 O HOH A2037 1555 3554 2.34 LINK CA CA A1460 O HOH A2037 1555 1555 2.34 LINK CA CA A1460 O HOH A2040 1555 1555 2.59 LINK CA CA A1460 O HOH A2040 1555 3554 2.59 CISPEP 1 TRP A 253 PRO A 254 0 -0.55 CISPEP 2 ILE A 443 TRP A 444 0 0.52 SITE 1 AC1 18 PHE A 115 TYR A 118 HIS A 124 GLY A 157 SITE 2 AC1 18 GLU A 180 ALA A 181 GLN A 206 LYS A 207 SITE 3 AC1 18 VAL A 208 GLU A 209 GLU A 223 TRP A 224 SITE 4 AC1 18 MET A 225 GLU A 232 MET A 234 SER A 237 SITE 5 AC1 18 HOH A2022 HOH A2132 SITE 1 AC2 6 ASP A 150 LYS A 151 ASP A 249 LEU A 362 SITE 2 AC2 6 HOH A2045 HOH A2117 SITE 1 AC3 1 ARG A 299 SITE 1 AC4 2 PRO A 375 HIS A 377 SITE 1 AC5 2 TYR A 114 HOH A2265 SITE 1 AC6 3 LEU A 376 HIS A 377 EDO A1452 SITE 1 AC7 3 HIS A 377 EDO A1451 HOH A2206 SITE 1 AC8 3 LEU A 319 THR A 333 ARG A 335 SITE 1 AC9 4 GLY A 374 PRO A 375 LEU A 376 HIS A 377 SITE 1 BC1 4 GLY A 196 ASP A 199 HOH A2087 HOH A2089 SITE 1 BC2 2 HOH A2037 HOH A2040 CRYST1 65.964 114.520 132.085 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015160 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008732 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007571 0.00000