HEADER TRANSFERASE 03-MAR-16 5FXW TITLE CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY IN TITLE 2 COMPLEX WITH FUMARATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEMETHYLASE UTY; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: JMJC DOMAIN, RESIDUES 878-1347; COMPND 5 SYNONYM: UBIQUITOUSLY-TRANSCRIBED TPR PROTEIN ON THE Y CHROMOSOME, COMPND 6 UBIQUITOUSLY-TRANSCRIBED Y CHROMOSOME TETRATRICOPEPTIDE REPEAT COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS TRANSFERASE, TCA INTERMEDIATE EXPDTA X-RAY DIFFRACTION AUTHOR R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN REVDAT 5 10-JAN-24 5FXW 1 REMARK REVDAT 4 15-NOV-23 5FXW 1 LINK ATOM REVDAT 3 24-JAN-18 5FXW 1 JRNL REVDAT 2 14-JUN-17 5FXW 1 ATOM REVDAT 1 16-MAR-16 5FXW 0 JRNL AUTH R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA, JRNL AUTH 2 F.VON DELFT,C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE JRNL TITL 2 DEMETHYLASE UTY IN COMPLEX WITH FUMARATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 69283 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3412 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.7387 - 6.0261 1.00 2982 150 0.1421 0.1614 REMARK 3 2 6.0261 - 4.7840 1.00 2857 149 0.1440 0.1640 REMARK 3 3 4.7840 - 4.1795 1.00 2812 165 0.1308 0.1991 REMARK 3 4 4.1795 - 3.7975 0.98 2788 129 0.1575 0.2061 REMARK 3 5 3.7975 - 3.5253 0.99 2751 146 0.1810 0.2282 REMARK 3 6 3.5253 - 3.3175 0.99 2798 125 0.1891 0.2544 REMARK 3 7 3.3175 - 3.1514 1.00 2791 134 0.1837 0.2202 REMARK 3 8 3.1514 - 3.0142 1.00 2787 139 0.1898 0.2642 REMARK 3 9 3.0142 - 2.8982 1.00 2767 156 0.1986 0.2585 REMARK 3 10 2.8982 - 2.7982 1.00 2779 148 0.1870 0.2697 REMARK 3 11 2.7982 - 2.7107 1.00 2763 137 0.1951 0.2662 REMARK 3 12 2.7107 - 2.6332 1.00 2754 132 0.2268 0.2666 REMARK 3 13 2.6332 - 2.5639 1.00 2774 152 0.2059 0.2751 REMARK 3 14 2.5639 - 2.5013 1.00 2772 119 0.2053 0.2647 REMARK 3 15 2.5013 - 2.4445 1.00 2761 121 0.2111 0.2863 REMARK 3 16 2.4445 - 2.3925 1.00 2760 146 0.2224 0.3047 REMARK 3 17 2.3925 - 2.3446 1.00 2750 166 0.2398 0.3105 REMARK 3 18 2.3446 - 2.3004 1.00 2710 146 0.2540 0.3113 REMARK 3 19 2.3004 - 2.2593 0.94 2572 143 0.2866 0.3105 REMARK 3 20 2.2593 - 2.2210 0.80 2199 116 0.4365 0.6060 REMARK 3 21 2.2210 - 2.1851 1.00 2712 171 0.2927 0.3330 REMARK 3 22 2.1851 - 2.1515 1.00 2742 129 0.3045 0.3576 REMARK 3 23 2.1515 - 2.1199 1.00 2749 153 0.3028 0.3908 REMARK 3 24 2.1199 - 2.0900 1.00 2741 140 0.3329 0.3490 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DISORDERED SIDE CHAINS WERE REMOVED REMARK 4 REMARK 4 5FXW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1290066349. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96862 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69482 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 54.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 1.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DIMPLE REMARK 200 STARTING MODEL: PDB ENTRY 3ZLI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.8 -- 0.25M REMARK 280 TRIMETHYLAMINE N-OXIDE -- 15% PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.31500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.10500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.10500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.31500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 877 REMARK 465 LEU A 878 REMARK 465 PRO A 879 REMARK 465 THR A 1002 REMARK 465 GLN A 1003 REMARK 465 HIS A 1004 REMARK 465 LYS A 1005 REMARK 465 ASP A 1006 REMARK 465 HIS A 1007 REMARK 465 SER A 1008 REMARK 465 ASP A 1009 REMARK 465 ASN A 1010 REMARK 465 GLU A 1011 REMARK 465 SER A 1012 REMARK 465 THR A 1013 REMARK 465 SER A 1014 REMARK 465 SER A 1015 REMARK 465 GLU A 1016 REMARK 465 ASN A 1017 REMARK 465 SER A 1018 REMARK 465 GLY A 1019 REMARK 465 ARG A 1020 REMARK 465 ARG A 1021 REMARK 465 ARG A 1022 REMARK 465 SER A 1345 REMARK 465 SER A 1346 REMARK 465 SER A 1347 REMARK 465 ALA A 1348 REMARK 465 GLU A 1349 REMARK 465 ASN A 1350 REMARK 465 LEU A 1351 REMARK 465 TYR A 1352 REMARK 465 PHE A 1353 REMARK 465 GLN A 1354 REMARK 465 MET B 877 REMARK 465 LEU B 878 REMARK 465 PRO B 879 REMARK 465 LYS B 880 REMARK 465 LYS B 1000 REMARK 465 ARG B 1001 REMARK 465 THR B 1002 REMARK 465 GLN B 1003 REMARK 465 HIS B 1004 REMARK 465 LYS B 1005 REMARK 465 ASP B 1006 REMARK 465 HIS B 1007 REMARK 465 SER B 1008 REMARK 465 ASP B 1009 REMARK 465 ASN B 1010 REMARK 465 GLU B 1011 REMARK 465 SER B 1012 REMARK 465 THR B 1013 REMARK 465 SER B 1014 REMARK 465 SER B 1015 REMARK 465 GLU B 1016 REMARK 465 ASN B 1017 REMARK 465 SER B 1018 REMARK 465 GLY B 1019 REMARK 465 ARG B 1020 REMARK 465 ARG B 1021 REMARK 465 ARG B 1022 REMARK 465 LYS B 1023 REMARK 465 GLY B 1024 REMARK 465 SER B 1345 REMARK 465 SER B 1346 REMARK 465 SER B 1347 REMARK 465 ALA B 1348 REMARK 465 GLU B 1349 REMARK 465 ASN B 1350 REMARK 465 LEU B 1351 REMARK 465 TYR B 1352 REMARK 465 PHE B 1353 REMARK 465 GLN B 1354 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 880 CG CD CE NZ REMARK 470 ASP A 881 CG OD1 OD2 REMARK 470 LYS A 882 CG CD CE NZ REMARK 470 LYS A 911 CE NZ REMARK 470 LYS A 934 CD CE NZ REMARK 470 GLU A 938 CG CD OE1 OE2 REMARK 470 LYS A 965 CE NZ REMARK 470 GLU A 971 CG CD OE1 OE2 REMARK 470 GLU A 996 CG CD OE1 OE2 REMARK 470 GLU A 999 CG CD OE1 OE2 REMARK 470 ARG A1001 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1041 CD CE NZ REMARK 470 LYS A1130 CG CD CE NZ REMARK 470 LYS A1234 CG CD CE NZ REMARK 470 GLU A1237 CG CD OE1 OE2 REMARK 470 LYS A1248 CE NZ REMARK 470 ASP A1272 CG OD1 OD2 REMARK 470 LYS A1299 CE NZ REMARK 470 LYS A1314 CG CD CE NZ REMARK 470 GLU A1328 CG CD OE1 OE2 REMARK 470 ASP A1329 CG OD1 OD2 REMARK 470 LYS B 882 CD CE NZ REMARK 470 GLU B 893 CG CD OE1 OE2 REMARK 470 LYS B 895 CG CD CE NZ REMARK 470 ARG B 896 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 900 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 925 CE NZ REMARK 470 LYS B 934 CE NZ REMARK 470 GLU B 938 CD OE1 OE2 REMARK 470 LYS B 965 CE NZ REMARK 470 GLU B 971 CG CD OE1 OE2 REMARK 470 ARG B 974 CD NE CZ NH1 NH2 REMARK 470 LYS B 981 CE NZ REMARK 470 GLU B 996 CD OE1 OE2 REMARK 470 GLU B 999 CG CD OE1 OE2 REMARK 470 LYS B1044 CE NZ REMARK 470 LYS B1234 CG CD CE NZ REMARK 470 GLU B1328 CG CD OE1 OE2 REMARK 470 GLN B1332 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1672 O HOH A 1730 2.09 REMARK 500 O HOH A 1631 O HOH A 1686 2.12 REMARK 500 O HOH A 1712 O HOH A 1757 2.13 REMARK 500 O HOH B 1752 O HOH B 1756 2.14 REMARK 500 O HOH B 1515 O HOH B 1757 2.15 REMARK 500 O2 EDO A 1410 O HOH A 1501 2.18 REMARK 500 OE1 GLN A 1332 NE2 GLN A 1336 2.18 REMARK 500 NZ LYS B 1130 O HOH B 1501 2.19 REMARK 500 O HOH A 1527 O HOH A 1703 2.19 REMARK 500 O HOH A 1520 O HOH A 1775 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 955 -122.77 48.21 REMARK 500 SER A 972 68.94 -150.06 REMARK 500 LYS A1000 -154.02 69.10 REMARK 500 ASN A1287 -72.28 71.85 REMARK 500 ALA B 955 -119.68 49.63 REMARK 500 ASN B1287 -72.79 72.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1093 NE2 REMARK 620 2 GLU A1095 OE2 91.2 REMARK 620 3 HIS A1173 NE2 84.5 87.2 REMARK 620 4 FUM A1403 OXT 90.9 176.4 95.9 REMARK 620 5 HOH A1501 O 87.2 81.7 166.0 95.5 REMARK 620 6 HOH A1518 O 171.0 92.2 104.0 85.3 85.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1278 SG REMARK 620 2 CYS A1281 SG 111.3 REMARK 620 3 CYS A1305 SG 112.8 112.1 REMARK 620 4 CYS A1308 SG 107.4 108.1 104.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1093 NE2 REMARK 620 2 GLU B1095 OE2 88.6 REMARK 620 3 HIS B1173 NE2 81.2 83.1 REMARK 620 4 FUM B1403 O 92.5 178.2 95.7 REMARK 620 5 HOH B1511 O 88.9 85.3 164.9 96.1 REMARK 620 6 HOH B1535 O 175.3 90.2 103.2 88.8 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1278 SG REMARK 620 2 CYS B1281 SG 111.2 REMARK 620 3 CYS B1305 SG 113.6 109.6 REMARK 620 4 CYS B1308 SG 108.0 111.3 102.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FUM A 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FUM B 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FXV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH N05859B REMARK 900 RELATED ID: 5FXX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH OXALOACETATE REMARK 900 RELATED ID: 5FXZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH CITRATE REMARK 900 RELATED ID: 5FY0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH L-MALATE REMARK 900 RELATED ID: 5FY1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH N08619B REMARK 900 RELATED ID: 5FY4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH SUCCINATE REMARK 900 RELATED ID: 5FY5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH FUMARATE REMARK 900 RELATED ID: 5FY7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH SUCCINATE REMARK 900 RELATED ID: 5FY8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN JMJD2A IN COMPLEX WITH D- THREO- REMARK 900 ISOCITRATE REMARK 900 RELATED ID: 5FY9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH PYRUVATE REMARK 900 RELATED ID: 5FYB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH MC1648 DBREF 5FXW A 878 1347 UNP O14607 UTY_HUMAN 878 1347 DBREF 5FXW B 878 1347 UNP O14607 UTY_HUMAN 878 1347 SEQADV 5FXW MET A 877 UNP O14607 EXPRESSION TAG SEQADV 5FXW ALA A 1348 UNP O14607 EXPRESSION TAG SEQADV 5FXW GLU A 1349 UNP O14607 EXPRESSION TAG SEQADV 5FXW ASN A 1350 UNP O14607 EXPRESSION TAG SEQADV 5FXW LEU A 1351 UNP O14607 EXPRESSION TAG SEQADV 5FXW TYR A 1352 UNP O14607 EXPRESSION TAG SEQADV 5FXW PHE A 1353 UNP O14607 EXPRESSION TAG SEQADV 5FXW GLN A 1354 UNP O14607 EXPRESSION TAG SEQADV 5FXW MET B 877 UNP O14607 EXPRESSION TAG SEQADV 5FXW ALA B 1348 UNP O14607 EXPRESSION TAG SEQADV 5FXW GLU B 1349 UNP O14607 EXPRESSION TAG SEQADV 5FXW ASN B 1350 UNP O14607 EXPRESSION TAG SEQADV 5FXW LEU B 1351 UNP O14607 EXPRESSION TAG SEQADV 5FXW TYR B 1352 UNP O14607 EXPRESSION TAG SEQADV 5FXW PHE B 1353 UNP O14607 EXPRESSION TAG SEQADV 5FXW GLN B 1354 UNP O14607 EXPRESSION TAG SEQRES 1 A 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 A 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 A 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 A 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 A 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 A 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 A 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 A 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 A 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 A 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 A 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 A 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 A 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 A 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 A 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 A 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 A 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 A 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 A 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 A 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 A 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 A 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 A 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 A 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 A 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 A 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 A 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 A 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 A 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 A 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 A 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 A 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 A 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 A 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 A 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 A 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 A 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN SEQRES 1 B 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 B 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 B 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 B 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 B 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 B 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 B 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 B 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 B 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 B 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 B 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 B 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 B 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 B 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 B 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 B 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 B 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 B 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 B 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 B 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 B 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 B 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 B 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 B 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 B 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 B 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 B 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 B 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 B 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 B 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 B 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 B 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 B 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 B 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 B 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 B 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 B 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN HET ZN A1401 1 HET MN A1402 1 HET FUM A1403 8 HET EDO A1404 4 HET EDO A1405 4 HET EDO A1406 4 HET EDO A1407 4 HET EDO A1408 4 HET EDO A1409 4 HET EDO A1410 4 HET ZN B1401 1 HET MN B1402 1 HET FUM B1403 8 HET EDO B1404 4 HET EDO B1405 4 HET EDO B1406 4 HET EDO B1407 4 HET EDO B1408 4 HET EDO B1409 4 HET EDO B1410 4 HET EDO B1411 4 HETNAM ZN ZINC ION HETNAM MN MANGANESE (II) ION HETNAM FUM FUMARIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MN 2(MN 2+) FORMUL 5 FUM 2(C4 H4 O4) FORMUL 6 EDO 15(C2 H6 O2) FORMUL 24 HOH *587(H2 O) HELIX 1 AA1 LYS A 880 ASN A 884 5 5 HELIX 2 AA2 ASN A 894 PHE A 900 1 7 HELIX 3 AA3 PHE A 900 ASN A 909 1 10 HELIX 4 AA4 GLY A 919 LYS A 925 1 7 HELIX 5 AA5 ASP A 927 PHE A 931 5 5 HELIX 6 AA6 SER A 932 ASN A 941 1 10 HELIX 7 AA7 ILE A 979 ASN A 998 1 20 HELIX 8 AA8 TRP A 1043 LEU A 1050 1 8 HELIX 9 AA9 THR A 1051 LEU A 1053 5 3 HELIX 10 AB1 PRO A 1054 ARG A 1058 5 5 HELIX 11 AB2 ASN A 1064 VAL A 1069 1 6 HELIX 12 AB3 GLU A 1095 PHE A 1099 5 5 HELIX 13 AB4 PRO A 1117 ASP A 1119 5 3 HELIX 14 AB5 TYR A 1120 ASN A 1131 1 12 HELIX 15 AB6 ASN A 1143 ALA A 1150 1 8 HELIX 16 AB7 THR A 1192 LYS A 1209 1 18 HELIX 17 AB8 PRO A 1216 ILE A 1228 1 13 HELIX 18 AB9 ASP A 1232 ALA A 1260 1 29 HELIX 19 AC1 ASN A 1293 GLN A 1298 1 6 HELIX 20 AC2 CYS A 1305 SER A 1313 1 9 HELIX 21 AC3 LYS A 1326 PHE A 1337 1 12 HELIX 22 AC4 ASN B 894 PHE B 899 1 6 HELIX 23 AC5 PHE B 900 ASN B 909 1 10 HELIX 24 AC6 GLY B 919 LYS B 925 1 7 HELIX 25 AC7 ASP B 927 PHE B 931 5 5 HELIX 26 AC8 SER B 932 ASN B 940 1 9 HELIX 27 AC9 ILE B 979 ASN B 998 1 20 HELIX 28 AD1 TRP B 1043 THR B 1051 1 9 HELIX 29 AD2 LYS B 1052 LEU B 1053 5 2 HELIX 30 AD3 PRO B 1054 ARG B 1058 5 5 HELIX 31 AD4 ASN B 1064 HIS B 1068 5 5 HELIX 32 AD5 GLU B 1095 PHE B 1099 5 5 HELIX 33 AD6 PRO B 1117 ASP B 1119 5 3 HELIX 34 AD7 TYR B 1120 ASN B 1131 1 12 HELIX 35 AD8 ASN B 1143 ALA B 1150 1 8 HELIX 36 AD9 THR B 1192 LYS B 1209 1 18 HELIX 37 AE1 PRO B 1216 ILE B 1228 1 13 HELIX 38 AE2 ASP B 1232 ALA B 1260 1 29 HELIX 39 AE3 ASN B 1293 GLN B 1298 1 6 HELIX 40 AE4 CYS B 1305 SER B 1313 1 9 HELIX 41 AE5 LYS B 1326 GLN B 1336 1 11 SHEET 1 AA1 9 SER A 889 TYR A 891 0 SHEET 2 AA1 9 VAL A 914 ARG A 918 1 O ARG A 918 N ILE A 890 SHEET 3 AA1 9 LEU A1164 ILE A1167 -1 O TRP A1166 N THR A 915 SHEET 4 AA1 9 CYS A1100 PRO A1108 -1 N ASN A1103 O VAL A1165 SHEET 5 AA1 9 CYS A1181 VAL A1188 -1 O ASN A1182 N ILE A1106 SHEET 6 AA1 9 GLN A1080 LYS A1084 -1 N TYR A1082 O ASN A1183 SHEET 7 AA1 9 THR A1028 ASP A1036 -1 N ILE A1035 O LEU A1081 SHEET 8 AA1 9 MET A 944 LEU A 951 -1 N GLU A 946 O THR A1033 SHEET 9 AA1 9 SER A 972 THR A 978 -1 O THR A 977 N VAL A 945 SHEET 1 AA2 4 ARG A1089 HIS A1093 0 SHEET 2 AA2 4 VAL A1172 ALA A1177 -1 O VAL A1175 N THR A1090 SHEET 3 AA2 4 CYS A1111 VAL A1116 -1 N GLU A1112 O GLN A1176 SHEET 4 AA2 4 TYR A1155 GLN A1159 -1 O GLN A1159 N CYS A1111 SHEET 1 AA3 3 VAL A1264 TRP A1266 0 SHEET 2 AA3 3 PHE A1319 GLU A1323 1 O VAL A1321 N ILE A1265 SHEET 3 AA3 3 LEU A1288 THR A1292 -1 N VAL A1291 O VAL A1320 SHEET 1 AA4 2 HIS A1276 TYR A1277 0 SHEET 2 AA4 2 GLU A1284 VAL A1285 -1 O VAL A1285 N HIS A1276 SHEET 1 AA5 9 SER B 889 TYR B 891 0 SHEET 2 AA5 9 VAL B 914 ARG B 918 1 O ARG B 918 N ILE B 890 SHEET 3 AA5 9 LEU B1164 ILE B1167 -1 O TRP B1166 N THR B 915 SHEET 4 AA5 9 CYS B1100 PRO B1108 -1 N ASN B1103 O VAL B1165 SHEET 5 AA5 9 CYS B1181 VAL B1188 -1 O ASN B1182 N ILE B1106 SHEET 6 AA5 9 GLN B1080 LYS B1084 -1 N GLN B1080 O ALA B1185 SHEET 7 AA5 9 THR B1028 ASP B1036 -1 N ILE B1035 O LEU B1081 SHEET 8 AA5 9 MET B 944 LEU B 951 -1 N GLU B 946 O THR B1033 SHEET 9 AA5 9 SER B 972 THR B 978 -1 O ASN B 973 N THR B 949 SHEET 1 AA6 4 ARG B1089 HIS B1093 0 SHEET 2 AA6 4 VAL B1172 ALA B1177 -1 O VAL B1175 N THR B1090 SHEET 3 AA6 4 CYS B1111 VAL B1116 -1 N GLU B1112 O GLN B1176 SHEET 4 AA6 4 TYR B1155 GLN B1159 -1 O GLN B1159 N CYS B1111 SHEET 1 AA7 3 VAL B1264 TRP B1266 0 SHEET 2 AA7 3 PHE B1319 GLU B1323 1 O VAL B1321 N ILE B1265 SHEET 3 AA7 3 LEU B1288 THR B1292 -1 N VAL B1291 O VAL B1320 SHEET 1 AA8 2 HIS B1276 TYR B1277 0 SHEET 2 AA8 2 GLU B1284 VAL B1285 -1 O VAL B1285 N HIS B1276 LINK NE2 HIS A1093 MN MN A1402 1555 1555 2.33 LINK OE2 GLU A1095 MN MN A1402 1555 1555 2.09 LINK NE2 HIS A1173 MN MN A1402 1555 1555 2.21 LINK SG CYS A1278 ZN ZN A1401 1555 1555 2.23 LINK SG CYS A1281 ZN ZN A1401 1555 1555 2.37 LINK SG CYS A1305 ZN ZN A1401 1555 1555 2.29 LINK SG CYS A1308 ZN ZN A1401 1555 1555 2.38 LINK MN MN A1402 OXT FUM A1403 1555 1555 1.99 LINK MN MN A1402 O HOH A1501 1555 1555 1.94 LINK MN MN A1402 O HOH A1518 1555 1555 2.27 LINK NE2 HIS B1093 MN MN B1402 1555 1555 2.31 LINK OE2 GLU B1095 MN MN B1402 1555 1555 2.17 LINK NE2 HIS B1173 MN MN B1402 1555 1555 2.33 LINK SG CYS B1278 ZN ZN B1401 1555 1555 2.31 LINK SG CYS B1281 ZN ZN B1401 1555 1555 2.37 LINK SG CYS B1305 ZN ZN B1401 1555 1555 2.28 LINK SG CYS B1308 ZN ZN B1401 1555 1555 2.43 LINK MN MN B1402 O FUM B1403 1555 1555 2.02 LINK MN MN B1402 O HOH B1511 1555 1555 2.00 LINK MN MN B1402 O HOH B1535 1555 1555 2.36 CISPEP 1 GLY A 1024 PRO A 1025 0 -3.67 CISPEP 2 GLY A 1107 PRO A 1108 0 5.90 CISPEP 3 GLY B 1107 PRO B 1108 0 6.38 SITE 1 AC1 4 CYS A1278 CYS A1281 CYS A1305 CYS A1308 SITE 1 AC2 7 HIS A1093 GLU A1095 HIS A1173 FUM A1403 SITE 2 AC2 7 EDO A1410 HOH A1501 HOH A1518 SITE 1 AC3 10 LYS A1084 THR A1090 HIS A1093 ASN A1103 SITE 2 AC3 10 HIS A1173 ASN A1183 MN A1402 HOH A1501 SITE 3 AC3 10 HOH A1518 HOH A1666 SITE 1 AC4 8 SER A 932 THR A 933 GLN A 986 PRO A1108 SITE 2 AC4 8 ASN A1182 EDO A1405 EDO A1409 HOH A1689 SITE 1 AC5 3 TRP A1180 EDO A1404 HOH A1510 SITE 1 AC6 2 ARG A1156 GLU B 999 SITE 1 AC7 5 HIS A1267 GLU A1273 HIS A1276 TYR A1301 SITE 2 AC7 5 VAL A1303 SITE 1 AC8 8 GLY A 919 ALA A 921 GLY A 922 PRO A1161 SITE 2 AC8 8 GLY A1162 ASP A1163 HOH A1507 HOH A1670 SITE 1 AC9 4 LEU A 928 GLY A 929 SER A 932 EDO A1404 SITE 1 AD1 9 GLY A1075 GLN A1080 TYR A1082 GLU A1095 SITE 2 AD1 9 SER A1101 TRP A1186 ASN A1187 MN A1402 SITE 3 AD1 9 HOH A1501 SITE 1 AD2 4 CYS B1278 CYS B1281 CYS B1305 CYS B1308 SITE 1 AD3 6 HIS B1093 GLU B1095 HIS B1173 FUM B1403 SITE 2 AD3 6 HOH B1511 HOH B1535 SITE 1 AD4 10 LYS B1084 THR B1090 HIS B1093 ASN B1103 SITE 2 AD4 10 HIS B1173 ASN B1183 MN B1402 HOH B1511 SITE 3 AD4 10 HOH B1535 HOH B1677 SITE 1 AD5 6 ILE B 967 TRP B 968 ARG B 969 ASN B1131 SITE 2 AD5 6 LEU B1133 HOH B1706 SITE 1 AD6 5 LYS A 895 VAL B1123 ASP B1126 PHE B1127 SITE 2 AD6 5 HOH B1650 SITE 1 AD7 5 PHE B 990 PRO B1108 TRP B1180 EDO B1407 SITE 2 AD7 5 HOH B1525 SITE 1 AD8 6 SER B 932 THR B 933 GLN B 986 ASN B1182 SITE 2 AD8 6 EDO B1406 HOH B1716 SITE 1 AD9 6 LEU B1050 THR B1051 ARG B1058 VAL B1059 SITE 2 AD9 6 VAL B1060 HOH B1621 SITE 1 AE1 5 ASP B1036 ASP B1039 LYS B1042 HOH B1566 SITE 2 AE1 5 HOH B1607 SITE 1 AE2 4 LYS B1207 SER B1210 CYS B1281 HOH B1612 SITE 1 AE3 11 GLY B1075 GLN B1080 TYR B1082 GLU B1095 SITE 2 AE3 11 SER B1101 ALA B1185 TRP B1186 ASN B1187 SITE 3 AE3 11 HOH B1511 HOH B1572 HOH B1601 CRYST1 90.630 109.440 118.210 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011034 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008460 0.00000