HEADER TRANSFERASE 03-MAR-16 5FXZ TITLE CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY IN TITLE 2 COMPLEX WITH CITRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEMETHYLASE UTY; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: JMJC DOMAIN, RESIDUES 878-1347; COMPND 5 SYNONYM: UBIQUITOUSLY-TRANSCRIBED TPR PROTEIN ON THE Y CHROMOSOME, U COMPND 6 BIQUITOUSLY-TRANSCRIBED Y CHROMOSOME TETRATRICOPEPTIDE REPEAT COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS TRANSFERASE, TCA INTERMEDIATE EXPDTA X-RAY DIFFRACTION AUTHOR R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN REVDAT 3 10-JAN-24 5FXZ 1 REMARK LINK REVDAT 2 24-JAN-18 5FXZ 1 JRNL REVDAT 1 16-MAR-16 5FXZ 0 JRNL AUTH R.NOWAK,T.KROJER,C.JOHANSSON,C.GILEADI,K.KUPINSKA, JRNL AUTH 2 F.VON DELFT,C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE JRNL TITL 2 DEMETHYLASE UTY IN COMPLEX WITH CITRATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 85791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 72.7788 - 6.1512 0.99 2929 149 0.1511 0.1701 REMARK 3 2 6.1512 - 4.8827 1.00 2814 145 0.1444 0.1641 REMARK 3 3 4.8827 - 4.2656 1.00 2744 163 0.1246 0.1687 REMARK 3 4 4.2656 - 3.8756 1.00 2784 126 0.1389 0.1607 REMARK 3 5 3.8756 - 3.5978 1.00 2735 148 0.1589 0.2060 REMARK 3 6 3.5978 - 3.3857 1.00 2775 123 0.1810 0.2081 REMARK 3 7 3.3857 - 3.2161 1.00 2724 136 0.1823 0.2212 REMARK 3 8 3.2161 - 3.0761 1.00 2728 131 0.1862 0.2362 REMARK 3 9 3.0761 - 2.9577 1.00 2705 159 0.1935 0.2528 REMARK 3 10 2.9577 - 2.8556 1.00 2730 137 0.1976 0.2466 REMARK 3 11 2.8556 - 2.7663 1.00 2724 139 0.1942 0.2478 REMARK 3 12 2.7663 - 2.6873 1.00 2704 131 0.2044 0.2666 REMARK 3 13 2.6873 - 2.6165 1.00 2693 150 0.1982 0.2833 REMARK 3 14 2.6165 - 2.5527 1.00 2733 127 0.2021 0.2369 REMARK 3 15 2.5527 - 2.4946 1.00 2738 110 0.1970 0.2711 REMARK 3 16 2.4946 - 2.4416 1.00 2697 141 0.2066 0.2852 REMARK 3 17 2.4416 - 2.3927 1.00 2696 155 0.2227 0.2959 REMARK 3 18 2.3927 - 2.3476 1.00 2676 151 0.2191 0.2955 REMARK 3 19 2.3476 - 2.3056 1.00 2694 150 0.2275 0.2752 REMARK 3 20 2.3056 - 2.2665 1.00 2686 147 0.2205 0.2657 REMARK 3 21 2.2665 - 2.2300 1.00 2658 149 0.2287 0.3452 REMARK 3 22 2.2300 - 2.1957 1.00 2714 150 0.2391 0.2803 REMARK 3 23 2.1957 - 2.1634 1.00 2688 139 0.2450 0.2634 REMARK 3 24 2.1634 - 2.1329 1.00 2663 135 0.2549 0.3248 REMARK 3 25 2.1329 - 2.1041 1.00 2691 142 0.2836 0.3312 REMARK 3 26 2.1041 - 2.0767 1.00 2712 145 0.2856 0.3493 REMARK 3 27 2.0767 - 2.0508 1.00 2709 123 0.2956 0.3337 REMARK 3 28 2.0508 - 2.0261 1.00 2667 130 0.2963 0.3470 REMARK 3 29 2.0261 - 2.0025 1.00 2685 160 0.3177 0.3358 REMARK 3 30 2.0025 - 1.9800 1.00 2669 135 0.3425 0.3622 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DISORDERED SIDE CHAINS WERE REMOVED. REMARK 4 REMARK 4 5FXZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1290066351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85893 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 72.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 1.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DIMPLE REMARK 200 STARTING MODEL: PDB ENTRY 3ZLI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.2 -- 25% PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.79000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.84000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.84000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.79000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 877 REMARK 465 LEU A 878 REMARK 465 PRO A 879 REMARK 465 THR A 1002 REMARK 465 GLN A 1003 REMARK 465 HIS A 1004 REMARK 465 LYS A 1005 REMARK 465 ASP A 1006 REMARK 465 HIS A 1007 REMARK 465 SER A 1008 REMARK 465 ASP A 1009 REMARK 465 ASN A 1010 REMARK 465 GLU A 1011 REMARK 465 SER A 1012 REMARK 465 THR A 1013 REMARK 465 SER A 1014 REMARK 465 SER A 1015 REMARK 465 GLU A 1016 REMARK 465 ASN A 1017 REMARK 465 SER A 1018 REMARK 465 GLY A 1019 REMARK 465 ARG A 1020 REMARK 465 ARG A 1021 REMARK 465 ARG A 1022 REMARK 465 SER A 1345 REMARK 465 SER A 1346 REMARK 465 SER A 1347 REMARK 465 ALA A 1348 REMARK 465 GLU A 1349 REMARK 465 ASN A 1350 REMARK 465 LEU A 1351 REMARK 465 TYR A 1352 REMARK 465 PHE A 1353 REMARK 465 GLN A 1354 REMARK 465 MET B 877 REMARK 465 LEU B 878 REMARK 465 PRO B 879 REMARK 465 LYS B 880 REMARK 465 LYS B 1000 REMARK 465 ARG B 1001 REMARK 465 THR B 1002 REMARK 465 GLN B 1003 REMARK 465 HIS B 1004 REMARK 465 LYS B 1005 REMARK 465 ASP B 1006 REMARK 465 HIS B 1007 REMARK 465 SER B 1008 REMARK 465 ASP B 1009 REMARK 465 ASN B 1010 REMARK 465 GLU B 1011 REMARK 465 SER B 1012 REMARK 465 THR B 1013 REMARK 465 SER B 1014 REMARK 465 SER B 1015 REMARK 465 GLU B 1016 REMARK 465 ASN B 1017 REMARK 465 SER B 1018 REMARK 465 GLY B 1019 REMARK 465 ARG B 1020 REMARK 465 ARG B 1021 REMARK 465 ARG B 1022 REMARK 465 LYS B 1023 REMARK 465 GLY B 1024 REMARK 465 SER B 1345 REMARK 465 SER B 1346 REMARK 465 SER B 1347 REMARK 465 ALA B 1348 REMARK 465 GLU B 1349 REMARK 465 ASN B 1350 REMARK 465 LEU B 1351 REMARK 465 TYR B 1352 REMARK 465 PHE B 1353 REMARK 465 GLN B 1354 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 880 CG CD CE NZ REMARK 470 ASP A 881 CG OD1 OD2 REMARK 470 LYS A 882 CG CD CE NZ REMARK 470 LYS A 911 CE NZ REMARK 470 LYS A 934 CD CE NZ REMARK 470 GLU A 938 CG CD OE1 OE2 REMARK 470 LYS A 965 CE NZ REMARK 470 GLU A 971 CG CD OE1 OE2 REMARK 470 GLU A 996 CG CD OE1 OE2 REMARK 470 GLU A 999 CG CD OE1 OE2 REMARK 470 ARG A1001 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1041 CD CE NZ REMARK 470 LYS A1130 CG CD CE NZ REMARK 470 LYS A1234 CG CD CE NZ REMARK 470 GLU A1237 CG CD OE1 OE2 REMARK 470 LYS A1248 CE NZ REMARK 470 ASP A1272 CG OD1 OD2 REMARK 470 LYS A1299 CE NZ REMARK 470 LYS A1314 CG CD CE NZ REMARK 470 GLU A1328 CG CD OE1 OE2 REMARK 470 ASP A1329 CG OD1 OD2 REMARK 470 LYS B 882 CD CE NZ REMARK 470 GLU B 893 CG CD OE1 OE2 REMARK 470 LYS B 895 CG CD CE NZ REMARK 470 LYS B 925 CE NZ REMARK 470 LYS B 934 CE NZ REMARK 470 GLU B 938 CD OE1 OE2 REMARK 470 LYS B 965 CE NZ REMARK 470 GLU B 971 CG CD OE1 OE2 REMARK 470 LYS B 981 CE NZ REMARK 470 GLU B 996 CD OE1 OE2 REMARK 470 GLU B 999 CG CD OE1 OE2 REMARK 470 LYS B1234 CG CD CE NZ REMARK 470 GLU B1328 CG CD OE1 OE2 REMARK 470 GLN B1332 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OA2 FLC B 2346 O HOH B 3139 1.88 REMARK 500 OG1 FLC B 2346 O HOH B 3152 1.90 REMARK 500 OA2 FLC A 2346 O HOH A 3160 1.92 REMARK 500 O HOH A 3013 O HOH B 3311 2.10 REMARK 500 OG2 FLC A 2346 O HOH A 3165 2.16 REMARK 500 O HOH B 3007 O HOH B 3310 2.17 REMARK 500 O HOH A 3204 O HOH A 3369 2.17 REMARK 500 O HOH A 3183 O HOH A 3184 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 940 74.04 -151.88 REMARK 500 ALA A 955 -120.20 45.52 REMARK 500 LYS A1000 -119.86 65.71 REMARK 500 ASN A1287 -69.72 74.08 REMARK 500 ASN B 940 72.55 -152.06 REMARK 500 ALA B 955 -119.63 45.89 REMARK 500 MET B1076 -60.80 -106.14 REMARK 500 ILE B1280 -60.19 -98.40 REMARK 500 ASN B1287 -69.75 74.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B3324 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH B3333 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B3348 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH B3349 DISTANCE = 5.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A2345 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1093 NE2 REMARK 620 2 GLU A1095 OE2 94.0 REMARK 620 3 HIS A1173 NE2 82.7 90.5 REMARK 620 4 FLC A2346 OB1 160.4 105.6 97.5 REMARK 620 5 FLC A2346 OHB 94.2 166.1 101.6 66.5 REMARK 620 6 HOH A3165 O 89.7 75.9 164.0 94.3 93.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A4002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1278 SG REMARK 620 2 CYS A1281 SG 109.3 REMARK 620 3 CYS A1305 SG 114.2 113.8 REMARK 620 4 CYS A1308 SG 107.4 109.8 101.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B2345 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1093 NE2 REMARK 620 2 GLU B1095 OE2 91.5 REMARK 620 3 HIS B1173 NE2 79.2 86.1 REMARK 620 4 FLC B2346 OG1 86.4 114.9 154.9 REMARK 620 5 FLC B2346 OB1 168.1 99.5 96.8 93.1 REMARK 620 6 FLC B2346 OHB 99.1 167.5 102.3 59.7 70.6 REMARK 620 7 HOH B3152 O 103.7 73.5 159.4 44.7 84.0 97.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1278 SG REMARK 620 2 CYS B1281 SG 109.5 REMARK 620 3 CYS B1305 SG 114.6 112.6 REMARK 620 4 CYS B1308 SG 107.4 111.5 100.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 4002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 4002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 2345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 2345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC B 2346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 2346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2347 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2347 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2349 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2349 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2353 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2353 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2354 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2355 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2354 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FXV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH N05859B REMARK 900 RELATED ID: 5FXW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH FUMARATE REMARK 900 RELATED ID: 5FXX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH OXALOACETATE REMARK 900 RELATED ID: 5FY0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH L-MALATE REMARK 900 RELATED ID: 5FY1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY REMARK 900 IN COMPLEX WITH N08619B REMARK 900 RELATED ID: 5FY4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JARID1B IN REMARK 900 COMPLEX WITH SUCCINATE DBREF 5FXZ A 878 1347 UNP O14607 UTY_HUMAN 878 1347 DBREF 5FXZ B 878 1347 UNP O14607 UTY_HUMAN 878 1347 SEQADV 5FXZ MET A 877 UNP O14607 EXPRESSION TAG SEQADV 5FXZ ALA A 1348 UNP O14607 EXPRESSION TAG SEQADV 5FXZ GLU A 1349 UNP O14607 EXPRESSION TAG SEQADV 5FXZ ASN A 1350 UNP O14607 EXPRESSION TAG SEQADV 5FXZ LEU A 1351 UNP O14607 EXPRESSION TAG SEQADV 5FXZ TYR A 1352 UNP O14607 EXPRESSION TAG SEQADV 5FXZ PHE A 1353 UNP O14607 EXPRESSION TAG SEQADV 5FXZ GLN A 1354 UNP O14607 EXPRESSION TAG SEQADV 5FXZ MET B 877 UNP O14607 EXPRESSION TAG SEQADV 5FXZ ALA B 1348 UNP O14607 EXPRESSION TAG SEQADV 5FXZ GLU B 1349 UNP O14607 EXPRESSION TAG SEQADV 5FXZ ASN B 1350 UNP O14607 EXPRESSION TAG SEQADV 5FXZ LEU B 1351 UNP O14607 EXPRESSION TAG SEQADV 5FXZ TYR B 1352 UNP O14607 EXPRESSION TAG SEQADV 5FXZ PHE B 1353 UNP O14607 EXPRESSION TAG SEQADV 5FXZ GLN B 1354 UNP O14607 EXPRESSION TAG SEQRES 1 A 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 A 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 A 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 A 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 A 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 A 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 A 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 A 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 A 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 A 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 A 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 A 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 A 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 A 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 A 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 A 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 A 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 A 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 A 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 A 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 A 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 A 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 A 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 A 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 A 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 A 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 A 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 A 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 A 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 A 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 A 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 A 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 A 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 A 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 A 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 A 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 A 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN SEQRES 1 B 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 B 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 B 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 B 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 B 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 B 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 B 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 B 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 B 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 B 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 B 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 B 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 B 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 B 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 B 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 B 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 B 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 B 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 B 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 B 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 B 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 B 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 B 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 B 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 B 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 B 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 B 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 B 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 B 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 B 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 B 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 B 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 B 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 B 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 B 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 B 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 B 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN HET MN A2345 1 HET FLC A2346 13 HET EDO A2347 4 HET EDO A2348 4 HET EDO A2349 4 HET EDO A2350 4 HET EDO A2351 4 HET EDO A2352 4 HET EDO A2353 4 HET EDO A2354 4 HET ZN A4002 1 HET MN B2345 1 HET FLC B2346 13 HET EDO B2347 4 HET EDO B2348 4 HET EDO B2349 4 HET EDO B2350 4 HET EDO B2351 4 HET EDO B2352 4 HET EDO B2353 4 HET EDO B2354 4 HET EDO B2355 4 HET ZN B4002 1 HETNAM MN MANGANESE (II) ION HETNAM FLC CITRATE ANION HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MN 2(MN 2+) FORMUL 4 FLC 2(C6 H5 O7 3-) FORMUL 5 EDO 17(C2 H6 O2) FORMUL 13 ZN 2(ZN 2+) FORMUL 26 HOH *721(H2 O) HELIX 1 1 LYS A 880 ASN A 884 5 5 HELIX 2 2 ASN A 894 PHE A 900 1 7 HELIX 3 3 PHE A 900 ASN A 909 1 10 HELIX 4 4 GLY A 919 LYS A 925 1 7 HELIX 5 5 ASP A 927 PHE A 931 5 5 HELIX 6 6 SER A 932 ASN A 940 1 9 HELIX 7 7 ILE A 979 ASN A 998 1 20 HELIX 8 8 TRP A 1043 LEU A 1050 1 8 HELIX 9 9 THR A 1051 LEU A 1053 5 3 HELIX 10 10 PRO A 1054 ARG A 1058 5 5 HELIX 11 11 GLU A 1095 PHE A 1099 5 5 HELIX 12 12 PRO A 1117 ASP A 1119 5 3 HELIX 13 13 TYR A 1120 LYS A 1130 1 11 HELIX 14 14 ASN A 1143 ALA A 1150 1 8 HELIX 15 15 THR A 1192 LYS A 1209 1 18 HELIX 16 16 PRO A 1216 ILE A 1228 1 13 HELIX 17 17 ASP A 1232 ALA A 1260 1 29 HELIX 18 18 ASN A 1293 GLN A 1298 1 6 HELIX 19 19 CYS A 1305 SER A 1313 1 9 HELIX 20 20 LYS A 1326 GLN A 1336 1 11 HELIX 21 21 ASN B 894 PHE B 899 1 6 HELIX 22 22 PRO B 901 ASN B 909 1 9 HELIX 23 23 GLY B 919 LYS B 925 1 7 HELIX 24 24 ASP B 927 PHE B 931 5 5 HELIX 25 25 SER B 932 ASN B 940 1 9 HELIX 26 26 ILE B 979 ASN B 998 1 20 HELIX 27 27 TRP B 1043 LEU B 1050 1 8 HELIX 28 28 THR B 1051 LEU B 1053 5 3 HELIX 29 29 PRO B 1054 ARG B 1058 5 5 HELIX 30 30 ASN B 1064 HIS B 1068 5 5 HELIX 31 31 GLU B 1095 PHE B 1099 5 5 HELIX 32 32 PRO B 1117 ASP B 1119 5 3 HELIX 33 33 TYR B 1120 ASN B 1131 1 12 HELIX 34 34 ASN B 1143 ALA B 1150 1 8 HELIX 35 35 THR B 1192 LYS B 1209 1 18 HELIX 36 36 PRO B 1216 ILE B 1228 1 13 HELIX 37 37 ASP B 1232 ALA B 1260 1 29 HELIX 38 38 ASN B 1293 GLN B 1298 1 6 HELIX 39 39 CYS B 1305 SER B 1313 1 9 HELIX 40 40 LYS B 1326 GLN B 1336 1 11 SHEET 1 AA 9 SER A 889 TYR A 891 0 SHEET 2 AA 9 VAL A 914 ARG A 918 1 O VAL A 916 N ILE A 890 SHEET 3 AA 9 LEU A1164 ILE A1167 -1 O LEU A1164 N ILE A 917 SHEET 4 AA 9 CYS A1100 PRO A1108 -1 O SER A1101 N ILE A1167 SHEET 5 AA 9 CYS A1181 VAL A1188 -1 O ASN A1182 N ILE A1106 SHEET 6 AA 9 GLN A1080 LYS A1084 -1 O GLN A1080 N ALA A1185 SHEET 7 AA 9 THR A1028 ASP A1036 -1 O GLY A1032 N MET A1083 SHEET 8 AA 9 MET A 944 LEU A 951 -1 O GLU A 946 N THR A1033 SHEET 9 AA 9 ASN A 973 THR A 978 -1 O ASN A 973 N THR A 949 SHEET 1 AB 4 ARG A1089 HIS A1093 0 SHEET 2 AB 4 VAL A1172 ALA A1177 -1 O HIS A1173 N HIS A1093 SHEET 3 AB 4 CYS A1111 VAL A1116 -1 O GLU A1112 N GLN A1176 SHEET 4 AB 4 TYR A1155 GLN A1159 -1 O TYR A1155 N VAL A1115 SHEET 1 AC 3 VAL A1264 TRP A1266 0 SHEET 2 AC 3 PHE A1319 GLU A1323 1 O VAL A1321 N ILE A1265 SHEET 3 AC 3 LEU A1288 THR A1292 -1 O LEU A1289 N LEU A1322 SHEET 1 AD 2 HIS A1276 TYR A1277 0 SHEET 2 AD 2 GLU A1284 VAL A1285 -1 O VAL A1285 N HIS A1276 SHEET 1 BA 9 SER B 889 TYR B 891 0 SHEET 2 BA 9 VAL B 914 ARG B 918 1 O VAL B 916 N ILE B 890 SHEET 3 BA 9 LEU B1164 ILE B1167 -1 O LEU B1164 N ILE B 917 SHEET 4 BA 9 CYS B1100 PRO B1108 -1 O SER B1101 N ILE B1167 SHEET 5 BA 9 CYS B1181 VAL B1188 -1 O ASN B1182 N ILE B1106 SHEET 6 BA 9 GLN B1080 LYS B1084 -1 O GLN B1080 N ALA B1185 SHEET 7 BA 9 THR B1028 ASP B1036 -1 O GLY B1032 N MET B1083 SHEET 8 BA 9 MET B 944 LEU B 951 -1 O GLU B 946 N THR B1033 SHEET 9 BA 9 ASN B 973 THR B 978 -1 O ASN B 973 N THR B 949 SHEET 1 BB 4 ARG B1089 HIS B1093 0 SHEET 2 BB 4 VAL B1172 ALA B1177 -1 O HIS B1173 N HIS B1093 SHEET 3 BB 4 CYS B1111 VAL B1116 -1 O GLU B1112 N GLN B1176 SHEET 4 BB 4 TYR B1155 GLN B1159 -1 O TYR B1155 N VAL B1115 SHEET 1 BC 3 VAL B1264 TRP B1266 0 SHEET 2 BC 3 PHE B1319 GLU B1323 1 O VAL B1321 N ILE B1265 SHEET 3 BC 3 LEU B1288 THR B1292 -1 O LEU B1289 N LEU B1322 SHEET 1 BD 2 HIS B1276 TYR B1277 0 SHEET 2 BD 2 GLU B1284 VAL B1285 -1 O VAL B1285 N HIS B1276 LINK NE2 HIS A1093 MN MN A2345 1555 1555 2.40 LINK OE2 GLU A1095 MN MN A2345 1555 1555 2.14 LINK NE2 HIS A1173 MN MN A2345 1555 1555 2.36 LINK SG CYS A1278 ZN ZN A4002 1555 1555 2.20 LINK SG CYS A1281 ZN ZN A4002 1555 1555 2.37 LINK SG CYS A1305 ZN ZN A4002 1555 1555 2.26 LINK SG CYS A1308 ZN ZN A4002 1555 1555 2.45 LINK MN MN A2345 OB1 FLC A2346 1555 1555 2.34 LINK MN MN A2345 OHB FLC A2346 1555 1555 2.45 LINK MN MN A2345 O HOH A3165 1555 1555 2.02 LINK NE2 HIS B1093 MN MN B2345 1555 1555 2.39 LINK OE2 GLU B1095 MN MN B2345 1555 1555 2.24 LINK NE2 HIS B1173 MN MN B2345 1555 1555 2.38 LINK SG CYS B1278 ZN ZN B4002 1555 1555 2.30 LINK SG CYS B1281 ZN ZN B4002 1555 1555 2.42 LINK SG CYS B1305 ZN ZN B4002 1555 1555 2.26 LINK SG CYS B1308 ZN ZN B4002 1555 1555 2.44 LINK MN MN B2345 OG1 FLC B2346 1555 1555 2.62 LINK MN MN B2345 OB1 FLC B2346 1555 1555 2.24 LINK MN MN B2345 OHB FLC B2346 1555 1555 2.28 LINK MN MN B2345 O HOH B3152 1555 1555 2.33 CISPEP 1 GLY A 1024 PRO A 1025 0 -7.84 CISPEP 2 GLY A 1107 PRO A 1108 0 5.96 CISPEP 3 GLY B 1107 PRO B 1108 0 5.47 SITE 1 AC1 4 CYS A1278 CYS A1281 CYS A1305 CYS A1308 SITE 1 AC2 4 CYS B1278 CYS B1281 CYS B1305 CYS B1308 SITE 1 AC3 5 HIS B1093 GLU B1095 HIS B1173 FLC B2346 SITE 2 AC3 5 HOH B3152 SITE 1 AC4 5 HIS A1093 GLU A1095 HIS A1173 FLC A2346 SITE 2 AC4 5 HOH A3165 SITE 1 AC5 14 TYR B1082 LYS B1084 THR B1090 HIS B1093 SITE 2 AC5 14 GLU B1095 SER B1101 ASN B1103 TRP B1113 SITE 3 AC5 14 HIS B1173 VAL B1175 ALA B1185 MN B2345 SITE 4 AC5 14 HOH B3139 HOH B3152 SITE 1 AC6 15 TYR A1082 LYS A1084 THR A1090 HIS A1093 SITE 2 AC6 15 GLU A1095 SER A1101 ASN A1103 TRP A1113 SITE 3 AC6 15 HIS A1173 VAL A1175 ALA A1185 MN A2345 SITE 4 AC6 15 EDO A2353 HOH A3160 HOH A3165 SITE 1 AC7 5 ILE B 967 TRP B 968 ARG B 969 LEU B1133 SITE 2 AC7 5 HOH B3341 SITE 1 AC8 7 SER A 932 THR A 933 GLN A 986 PRO A1108 SITE 2 AC8 7 ASN A1182 EDO A2348 EDO A2352 SITE 1 AC9 4 PHE A 990 TRP A1180 EDO A2347 HOH A3092 SITE 1 BC1 3 ARG A1156 HOH A3004 GLU B 999 SITE 1 BC2 4 HIS A1267 GLU A1273 HIS A1276 TYR A1301 SITE 1 BC3 9 GLY A 919 ALA A 921 GLY A 922 PRO A1161 SITE 2 BC3 9 GLY A1162 ASP A1163 HOH A3204 HOH A3369 SITE 3 BC3 9 HOH A3370 SITE 1 BC4 4 LYS A 895 VAL B1123 ASP B1126 PHE B1127 SITE 1 BC5 5 PHE B 990 PRO B1108 TRP B1180 EDO B2350 SITE 2 BC5 5 HOH B3091 SITE 1 BC6 8 SER B 932 THR B 933 GLN B 986 GLY B1107 SITE 2 BC6 8 PRO B1108 ASN B1182 EDO B2349 EDO B2355 SITE 1 BC7 6 LEU A 928 GLY A 929 SER A 932 ILE A1106 SITE 2 BC7 6 EDO A2347 HOH A3371 SITE 1 BC8 4 LEU B1050 ARG B1058 VAL B1059 VAL B1060 SITE 1 BC9 9 GLY A1075 GLN A1080 TYR A1082 GLU A1095 SITE 2 BC9 9 ALA A1185 TRP A1186 ASN A1187 FLC A2346 SITE 3 BC9 9 HOH A3165 SITE 1 CC1 5 HIS B 943 ASP B1036 ASP B1039 LYS B1042 SITE 2 CC1 5 HOH B3049 SITE 1 CC2 4 LYS B1207 CYS B1281 HOH B3207 HOH B3208 SITE 1 CC3 7 PRO B 910 PRO B 913 ASN B1168 ALA B1169 SITE 2 CC3 7 CYS B1194 LEU B1198 HOH B3165 SITE 1 CC4 5 LEU B 928 SER B 932 GLY B1107 PRO B1108 SITE 2 CC4 5 EDO B2350 SITE 1 CC5 5 THR A 908 ASN A1168 PRO A1190 THR A1192 SITE 2 CC5 5 CYS A1194 CRYST1 91.580 111.560 119.680 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010919 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008964 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008356 0.00000