data_5G25 # _entry.id 5G25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5G25 PDBE EBI-66022 WWPDB D_1290066022 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5G23 unspecified 'TYPE IV-LIKE PILIN TTHA1219 FROM THERMUS THERMOPHILUS' PDB 5G24 unspecified 'TYPE IV-LIKE PILIN TTHA1219 FROM THERMUS THERMOPHILUS' PDB 5G2F unspecified 'TYPE IV-LIKE COMPETENCE PILIN TTHA1222 FROM THERMUS THERMOPHILUS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5G25 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2016-04-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Karuppiah, V.' 1 'Derrick, J.P.' 2 # _citation.id primary _citation.title 'Structures of Type Iv Pilins from Thermus Thermophilus Demonstrate Similarities with Type II Secretion System Pseudopilins' _citation.journal_abbrev J.Struct.Biol. _citation.journal_volume 196 _citation.page_first 375 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27612581 _citation.pdbx_database_id_DOI 10.1016/J.JSB.2016.08.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Karuppiah, V.' 1 primary 'Thistlethwaite, A.' 2 primary 'Derrick, J.P.' 3 # _cell.entry_id 5G25 _cell.length_a 156.590 _cell.length_b 156.590 _cell.length_c 156.590 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G25 _symmetry.space_group_name_H-M 'F 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TYPE-IV LIKE COMPETENCE PILIN TTHA1218' 10710.224 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 12 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAGQQGRELQTVVREMENFMERLRQDPQGIPALCNGALALGGKQGTCTAIPCNVAQDGGLACPTAGDVRAFQVVLRVEEK RLETVVYRPLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAGQQGRELQTVVREMENFMERLRQDPQGIPALCNGALALGGKQGTCTAIPCNVAQDGGLACPTAGDVRAFQVVLRVEEK RLETVVYRPLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLY n 1 4 GLN n 1 5 GLN n 1 6 GLY n 1 7 ARG n 1 8 GLU n 1 9 LEU n 1 10 GLN n 1 11 THR n 1 12 VAL n 1 13 VAL n 1 14 ARG n 1 15 GLU n 1 16 MET n 1 17 GLU n 1 18 ASN n 1 19 PHE n 1 20 MET n 1 21 GLU n 1 22 ARG n 1 23 LEU n 1 24 ARG n 1 25 GLN n 1 26 ASP n 1 27 PRO n 1 28 GLN n 1 29 GLY n 1 30 ILE n 1 31 PRO n 1 32 ALA n 1 33 LEU n 1 34 CYS n 1 35 ASN n 1 36 GLY n 1 37 ALA n 1 38 LEU n 1 39 ALA n 1 40 LEU n 1 41 GLY n 1 42 GLY n 1 43 LYS n 1 44 GLN n 1 45 GLY n 1 46 THR n 1 47 CYS n 1 48 THR n 1 49 ALA n 1 50 ILE n 1 51 PRO n 1 52 CYS n 1 53 ASN n 1 54 VAL n 1 55 ALA n 1 56 GLN n 1 57 ASP n 1 58 GLY n 1 59 GLY n 1 60 LEU n 1 61 ALA n 1 62 CYS n 1 63 PRO n 1 64 THR n 1 65 ALA n 1 66 GLY n 1 67 ASP n 1 68 VAL n 1 69 ARG n 1 70 ALA n 1 71 PHE n 1 72 GLN n 1 73 VAL n 1 74 VAL n 1 75 LEU n 1 76 ARG n 1 77 VAL n 1 78 GLU n 1 79 GLU n 1 80 LYS n 1 81 ARG n 1 82 LEU n 1 83 GLU n 1 84 THR n 1 85 VAL n 1 86 VAL n 1 87 TYR n 1 88 ARG n 1 89 PRO n 1 90 LEU n 1 91 GLU n 1 92 HIS n 1 93 HIS n 1 94 HIS n 1 95 HIS n 1 96 HIS n 1 97 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMUS THERMOPHILUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'T7 EXPRESS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET22B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5SIZ6_THET8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q5SIZ6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5G25 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 89 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5SIZ6 _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 123 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 36 _struct_ref_seq.pdbx_auth_seq_align_end 123 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5G25 MET A 1 ? UNP Q5SIZ6 ? ? 'expression tag' 35 1 1 5G25 LEU A 90 ? UNP Q5SIZ6 ? ? 'expression tag' 124 2 1 5G25 GLU A 91 ? UNP Q5SIZ6 ? ? 'expression tag' 125 3 1 5G25 HIS A 92 ? UNP Q5SIZ6 ? ? 'expression tag' 126 4 1 5G25 HIS A 93 ? UNP Q5SIZ6 ? ? 'expression tag' 127 5 1 5G25 HIS A 94 ? UNP Q5SIZ6 ? ? 'expression tag' 128 6 1 5G25 HIS A 95 ? UNP Q5SIZ6 ? ? 'expression tag' 129 7 1 5G25 HIS A 96 ? UNP Q5SIZ6 ? ? 'expression tag' 130 8 1 5G25 HIS A 97 ? UNP Q5SIZ6 ? ? 'expression tag' 131 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5G25 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.73 _exptl_crystal.density_percent_sol 67.06 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES PH 7.0 1M SUCCINIC ACID 1% PEG 2000 MME' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 77 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 ? ? 2012-10-01 ? 2 ? ? ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9000 1.0 2 0.9700 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'DIAMOND BEAMLINE I02' Diamond I02 0.9000 ? 2 SYNCHROTRON 'DIAMOND BEAMLINE I04' Diamond I04 0.9700 ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5G25 _reflns.observed_criterion_sigma_I 3.6 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 55.36 _reflns.d_resolution_high 2.30 _reflns.number_obs 7765 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.36 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.75 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.60 _reflns_shell.pdbx_redundancy 12.2 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5G25 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7380 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 90.41 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.77 _refine.ls_R_factor_obs 0.20962 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20828 _refine.ls_R_factor_R_free 0.23690 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 356 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 56.233 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.177 _refine.pdbx_overall_ESU_R_Free 0.163 _refine.overall_SU_ML 0.111 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.483 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 619 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 637 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 90.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.019 ? 633 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 625 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.384 1.993 ? 856 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.656 3.000 ? 1432 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.471 5.000 ? 81 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.556 24.138 ? 29 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.963 15.000 ? 108 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.361 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.073 0.200 ? 99 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 723 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 136 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 4.412 5.164 ? 327 'X-RAY DIFFRACTION' ? r_mcbond_other 4.417 5.144 ? 326 'X-RAY DIFFRACTION' ? r_mcangle_it 5.924 7.699 ? 407 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 6.035 5.992 ? 306 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.302 _refine_ls_shell.d_res_low 2.362 _refine_ls_shell.number_reflns_R_work 528 _refine_ls_shell.R_factor_R_work 0.225 _refine_ls_shell.percent_reflns_obs 99.82 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5G25 _struct.title 'Type IV-like pilin TTHA1218 from Thermus thermophilus' _struct.pdbx_descriptor 'TYPE-IV LIKE COMPETENCE PILIN TTHA1218' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5G25 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'STRUCTURAL PROTEIN, NATURAL COMPETENCE, TYPE IV PILUS, DNA UPTAKE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 10 ? GLN A 25 ? GLN A 44 GLN A 59 1 ? 16 HELX_P HELX_P2 2 ASP A 26 ? GLN A 28 ? ASP A 60 GLN A 62 5 ? 3 HELX_P HELX_P3 3 GLY A 29 ? CYS A 34 ? GLY A 63 CYS A 68 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 68 A CYS 81 1_555 ? ? ? ? ? ? ? 2.033 ? disulf2 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 62 SG ? ? A CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? 2.040 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id CYS _struct_mon_prot_cis.label_seq_id 62 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id CYS _struct_mon_prot_cis.auth_seq_id 96 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 63 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 97 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 4 ? AD ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 36 ? LEU A 40 ? GLY A 70 LEU A 74 AA 2 LYS A 43 ? VAL A 54 ? LYS A 77 VAL A 88 AB 1 LEU A 60 ? ALA A 61 ? LEU A 94 ALA A 95 AB 2 LYS A 43 ? VAL A 54 ? LYS A 77 VAL A 88 AC 1 LYS A 80 ? TYR A 87 ? LYS A 114 TYR A 121 AC 2 ALA A 70 ? VAL A 77 ? ALA A 104 VAL A 111 AC 3 LYS A 43 ? VAL A 54 ? LYS A 77 VAL A 88 AC 4 LEU A 60 ? ALA A 61 ? LEU A 94 ALA A 95 AD 1 LYS A 80 ? TYR A 87 ? LYS A 114 TYR A 121 AD 2 ALA A 70 ? VAL A 77 ? ALA A 104 VAL A 111 AD 3 LYS A 43 ? VAL A 54 ? LYS A 77 VAL A 88 AD 4 GLY A 36 ? LEU A 40 ? GLY A 70 LEU A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 40 ? N LEU A 74 O LYS A 43 ? O LYS A 77 AB 1 2 N ALA A 61 ? N ALA A 95 O ASN A 53 ? O ASN A 87 AC 1 2 N VAL A 86 ? N VAL A 120 O PHE A 71 ? O PHE A 105 AC 2 3 N ARG A 76 ? N ARG A 110 O THR A 46 ? O THR A 80 AC 3 4 N ASN A 53 ? N ASN A 87 O ALA A 61 ? O ALA A 95 AD 1 2 N VAL A 86 ? N VAL A 120 O PHE A 71 ? O PHE A 105 AD 2 3 N ARG A 76 ? N ARG A 110 O THR A 46 ? O THR A 80 AD 3 4 N CYS A 47 ? N CYS A 81 O GLY A 36 ? O GLY A 70 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 1126' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ALA A 32 ? ALA A 66 . ? 1_555 ? 2 AC1 7 ALA A 32 ? ALA A 66 . ? 54_555 ? 3 AC1 7 LEU A 33 ? LEU A 67 . ? 54_555 ? 4 AC1 7 ASN A 35 ? ASN A 69 . ? 54_555 ? 5 AC1 7 ASN A 35 ? ASN A 69 . ? 1_555 ? 6 AC1 7 GLY A 36 ? GLY A 70 . ? 54_555 ? 7 AC1 7 ALA A 37 ? ALA A 71 . ? 54_555 ? # _database_PDB_matrix.entry_id 5G25 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5G25 _atom_sites.fract_transf_matrix[1][1] 0.006386 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006386 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006386 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 35 ? ? ? A . n A 1 2 ALA 2 36 ? ? ? A . n A 1 3 GLY 3 37 ? ? ? A . n A 1 4 GLN 4 38 ? ? ? A . n A 1 5 GLN 5 39 ? ? ? A . n A 1 6 GLY 6 40 ? ? ? A . n A 1 7 ARG 7 41 ? ? ? A . n A 1 8 GLU 8 42 ? ? ? A . n A 1 9 LEU 9 43 ? ? ? A . n A 1 10 GLN 10 44 44 GLN GLN A . n A 1 11 THR 11 45 45 THR THR A . n A 1 12 VAL 12 46 46 VAL VAL A . n A 1 13 VAL 13 47 47 VAL VAL A . n A 1 14 ARG 14 48 48 ARG ARG A . n A 1 15 GLU 15 49 49 GLU GLU A . n A 1 16 MET 16 50 50 MET MET A . n A 1 17 GLU 17 51 51 GLU GLU A . n A 1 18 ASN 18 52 52 ASN ASN A . n A 1 19 PHE 19 53 53 PHE PHE A . n A 1 20 MET 20 54 54 MET MET A . n A 1 21 GLU 21 55 55 GLU GLU A . n A 1 22 ARG 22 56 56 ARG ARG A . n A 1 23 LEU 23 57 57 LEU LEU A . n A 1 24 ARG 24 58 58 ARG ARG A . n A 1 25 GLN 25 59 59 GLN GLN A . n A 1 26 ASP 26 60 60 ASP ASP A . n A 1 27 PRO 27 61 61 PRO PRO A . n A 1 28 GLN 28 62 62 GLN GLN A . n A 1 29 GLY 29 63 63 GLY GLY A . n A 1 30 ILE 30 64 64 ILE ILE A . n A 1 31 PRO 31 65 65 PRO PRO A . n A 1 32 ALA 32 66 66 ALA ALA A . n A 1 33 LEU 33 67 67 LEU LEU A . n A 1 34 CYS 34 68 68 CYS CYS A . n A 1 35 ASN 35 69 69 ASN ASN A . n A 1 36 GLY 36 70 70 GLY GLY A . n A 1 37 ALA 37 71 71 ALA ALA A . n A 1 38 LEU 38 72 72 LEU LEU A . n A 1 39 ALA 39 73 73 ALA ALA A . n A 1 40 LEU 40 74 74 LEU LEU A . n A 1 41 GLY 41 75 75 GLY GLY A . n A 1 42 GLY 42 76 76 GLY GLY A . n A 1 43 LYS 43 77 77 LYS LYS A . n A 1 44 GLN 44 78 78 GLN GLN A . n A 1 45 GLY 45 79 79 GLY GLY A . n A 1 46 THR 46 80 80 THR THR A . n A 1 47 CYS 47 81 81 CYS CYS A . n A 1 48 THR 48 82 82 THR THR A . n A 1 49 ALA 49 83 83 ALA ALA A . n A 1 50 ILE 50 84 84 ILE ILE A . n A 1 51 PRO 51 85 85 PRO PRO A . n A 1 52 CYS 52 86 86 CYS CYS A . n A 1 53 ASN 53 87 87 ASN ASN A . n A 1 54 VAL 54 88 88 VAL VAL A . n A 1 55 ALA 55 89 89 ALA ALA A . n A 1 56 GLN 56 90 90 GLN GLN A . n A 1 57 ASP 57 91 91 ASP ASP A . n A 1 58 GLY 58 92 92 GLY GLY A . n A 1 59 GLY 59 93 93 GLY GLY A . n A 1 60 LEU 60 94 94 LEU LEU A . n A 1 61 ALA 61 95 95 ALA ALA A . n A 1 62 CYS 62 96 96 CYS CYS A . n A 1 63 PRO 63 97 97 PRO PRO A . n A 1 64 THR 64 98 98 THR THR A . n A 1 65 ALA 65 99 99 ALA ALA A . n A 1 66 GLY 66 100 100 GLY GLY A . n A 1 67 ASP 67 101 101 ASP ASP A . n A 1 68 VAL 68 102 102 VAL VAL A . n A 1 69 ARG 69 103 103 ARG ARG A . n A 1 70 ALA 70 104 104 ALA ALA A . n A 1 71 PHE 71 105 105 PHE PHE A . n A 1 72 GLN 72 106 106 GLN GLN A . n A 1 73 VAL 73 107 107 VAL VAL A . n A 1 74 VAL 74 108 108 VAL VAL A . n A 1 75 LEU 75 109 109 LEU LEU A . n A 1 76 ARG 76 110 110 ARG ARG A . n A 1 77 VAL 77 111 111 VAL VAL A . n A 1 78 GLU 78 112 112 GLU GLU A . n A 1 79 GLU 79 113 113 GLU GLU A . n A 1 80 LYS 80 114 114 LYS LYS A . n A 1 81 ARG 81 115 115 ARG ARG A . n A 1 82 LEU 82 116 116 LEU LEU A . n A 1 83 GLU 83 117 117 GLU GLU A . n A 1 84 THR 84 118 118 THR THR A . n A 1 85 VAL 85 119 119 VAL VAL A . n A 1 86 VAL 86 120 120 VAL VAL A . n A 1 87 TYR 87 121 121 TYR TYR A . n A 1 88 ARG 88 122 122 ARG ARG A . n A 1 89 PRO 89 123 123 PRO PRO A . n A 1 90 LEU 90 124 124 LEU LEU A . n A 1 91 GLU 91 125 125 GLU GLU A . n A 1 92 HIS 92 126 ? ? ? A . n A 1 93 HIS 93 127 ? ? ? A . n A 1 94 HIS 94 128 ? ? ? A . n A 1 95 HIS 95 129 ? ? ? A . n A 1 96 HIS 96 130 ? ? ? A . n A 1 97 HIS 97 131 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 1126 1126 GOL GOL A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-14 2 'Structure model' 1 1 2016-09-28 3 'Structure model' 1 2 2016-12-07 4 'Structure model' 1 3 2017-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category refine # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_refine.pdbx_method_to_determine_struct' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.8.0124 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 69 ? ? -152.15 53.89 2 1 GLU A 112 ? ? 54.85 -129.70 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 35 ? A MET 1 2 1 Y 1 A ALA 36 ? A ALA 2 3 1 Y 1 A GLY 37 ? A GLY 3 4 1 Y 1 A GLN 38 ? A GLN 4 5 1 Y 1 A GLN 39 ? A GLN 5 6 1 Y 1 A GLY 40 ? A GLY 6 7 1 Y 1 A ARG 41 ? A ARG 7 8 1 Y 1 A GLU 42 ? A GLU 8 9 1 Y 1 A LEU 43 ? A LEU 9 10 1 Y 1 A HIS 126 ? A HIS 92 11 1 Y 1 A HIS 127 ? A HIS 93 12 1 Y 1 A HIS 128 ? A HIS 94 13 1 Y 1 A HIS 129 ? A HIS 95 14 1 Y 1 A HIS 130 ? A HIS 96 15 1 Y 1 A HIS 131 ? A HIS 97 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #