HEADER ISOMERASE 08-APR-16 5G2I TITLE S. ENTERICA HISA MUTANT DUP13-15(VVR) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO) COMPND 3 METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE COMPND 6 RIBOTIDE ISOMERASE; COMPND 7 EC: 5.3.1.16; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: [DUP13-15(VVR)] SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA; SOURCE 3 ORGANISM_TAXID: 28901; SOURCE 4 GENE: HISA, AIY46_13150, AL463_17045, CQW68_13095, D3346_17640, SOURCE 5 D3Q81_15095, EAW95_14430, FJR52_10950, GCH85_22590, NCTC6385_02080, SOURCE 6 ND68_15100; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PEXP5-CT KEYWDS ISOMERASE, HISA, PROTEIN EVOLUTION, IAD MODEL, TRPF EXPDTA X-RAY DIFFRACTION AUTHOR X.GUO,A.SODERHOLM,M.NEWTON,J.NASVALL,F.DUARTE,D.ANDERSSON,W.PATRICK, AUTHOR 2 M.SELMER REVDAT 5 10-JAN-24 5G2I 1 COMPND SOURCE REMARK DBREF REVDAT 5 2 1 SEQADV SHEET LINK ATOM REVDAT 4 23-AUG-17 5G2I 1 REMARK REVDAT 3 10-MAY-17 5G2I 1 JRNL REVDAT 2 26-APR-17 5G2I 1 JRNL REVDAT 1 19-APR-17 5G2I 0 JRNL AUTH M.S.NEWTON,X.GUO,A.SODERHOLM,J.NASVALL,P.LUNDSTROM, JRNL AUTH 2 D.I.ANDERSSON,M.SELMER,W.M.PATRICK JRNL TITL STRUCTURAL AND FUNCTIONAL INNOVATIONS IN THE REAL-TIME JRNL TITL 2 EVOLUTION OF NEW ( BETA ALPHA )8 BARREL ENZYMES. JRNL REF PROC. NATL. ACAD. SCI. V. 114 4727 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28416687 JRNL DOI 10.1073/PNAS.1618552114 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 35934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1797 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2023 - 3.7642 1.00 2861 151 0.1778 0.1855 REMARK 3 2 3.7642 - 2.9879 1.00 2703 143 0.1763 0.1962 REMARK 3 3 2.9879 - 2.6103 1.00 2669 140 0.1930 0.2373 REMARK 3 4 2.6103 - 2.3716 1.00 2653 140 0.1796 0.2168 REMARK 3 5 2.3716 - 2.2016 0.99 2601 136 0.1841 0.2050 REMARK 3 6 2.2016 - 2.0718 1.00 2606 138 0.1754 0.2014 REMARK 3 7 2.0718 - 1.9681 1.00 2601 137 0.1824 0.2037 REMARK 3 8 1.9681 - 1.8824 0.98 2530 133 0.2160 0.2559 REMARK 3 9 1.8824 - 1.8099 1.00 2604 137 0.1918 0.2211 REMARK 3 10 1.8099 - 1.7475 1.00 2590 136 0.1757 0.2077 REMARK 3 11 1.7475 - 1.6928 1.00 2564 135 0.1810 0.1901 REMARK 3 12 1.6928 - 1.6444 1.00 2608 137 0.1903 0.2267 REMARK 3 13 1.6444 - 1.6011 1.00 2547 134 0.2113 0.2692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1863 REMARK 3 ANGLE : 1.061 2564 REMARK 3 CHIRALITY : 0.040 312 REMARK 3 PLANARITY : 0.005 331 REMARK 3 DIHEDRAL : 12.064 696 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:14) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2881 42.8755 52.1058 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.1242 REMARK 3 T33: 0.2195 T12: 0.0091 REMARK 3 T13: -0.0034 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 7.2228 L22: 3.5543 REMARK 3 L33: 4.2291 L12: -1.6533 REMARK 3 L13: -2.5559 L23: 1.0675 REMARK 3 S TENSOR REMARK 3 S11: -0.3378 S12: 0.0084 S13: -0.2457 REMARK 3 S21: 0.1061 S22: 0.1216 S23: -0.5290 REMARK 3 S31: 0.4658 S32: 0.2968 S33: 0.2042 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 15:29) REMARK 3 ORIGIN FOR THE GROUP (A): 37.8715 33.4699 53.2882 REMARK 3 T TENSOR REMARK 3 T11: 0.5634 T22: 0.3553 REMARK 3 T33: 0.8168 T12: 0.0849 REMARK 3 T13: 0.0419 T23: 0.0938 REMARK 3 L TENSOR REMARK 3 L11: 7.2107 L22: 5.8928 REMARK 3 L33: 8.9129 L12: -0.0696 REMARK 3 L13: 1.1688 L23: -1.7850 REMARK 3 S TENSOR REMARK 3 S11: -0.4539 S12: -0.5644 S13: -1.4067 REMARK 3 S21: 0.3645 S22: -0.4711 S23: -1.4095 REMARK 3 S31: 0.5567 S32: 0.5409 S33: 0.9192 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 30:48) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6305 45.3467 47.8801 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1069 REMARK 3 T33: 0.1387 T12: -0.0187 REMARK 3 T13: 0.0081 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 3.2033 L22: 1.7690 REMARK 3 L33: 1.6577 L12: 1.8284 REMARK 3 L13: -0.0325 L23: -0.1237 REMARK 3 S TENSOR REMARK 3 S11: -0.1685 S12: 0.1787 S13: -0.2460 REMARK 3 S21: -0.1035 S22: 0.0509 S23: -0.0901 REMARK 3 S31: 0.2348 S32: 0.0029 S33: 0.1092 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 49:64) REMARK 3 ORIGIN FOR THE GROUP (A): 47.5205 46.7007 49.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.2615 REMARK 3 T33: 0.6573 T12: 0.0394 REMARK 3 T13: 0.0623 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 2.7094 L22: 2.2243 REMARK 3 L33: 4.1203 L12: -1.3292 REMARK 3 L13: -0.5574 L23: -0.0654 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: 0.0914 S13: -0.2150 REMARK 3 S21: -0.1780 S22: 0.2176 S23: -1.8397 REMARK 3 S31: -0.0522 S32: 0.6058 S33: -0.0624 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 65:82) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9498 51.9710 46.9572 REMARK 3 T TENSOR REMARK 3 T11: 0.1747 T22: 0.1327 REMARK 3 T33: 0.1482 T12: -0.0168 REMARK 3 T13: 0.0312 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 3.9328 L22: 3.1317 REMARK 3 L33: 3.9814 L12: -0.5823 REMARK 3 L13: 0.4643 L23: -0.1127 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: 0.0614 S13: -0.0560 REMARK 3 S21: -0.3513 S22: -0.0166 S23: -0.2326 REMARK 3 S31: 0.0205 S32: 0.1529 S33: -0.0004 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 83:96) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8466 58.1225 50.1491 REMARK 3 T TENSOR REMARK 3 T11: 0.1159 T22: 0.3000 REMARK 3 T33: 0.1429 T12: -0.0146 REMARK 3 T13: 0.0099 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 8.1257 L22: 4.4635 REMARK 3 L33: 7.3083 L12: -0.2471 REMARK 3 L13: 4.8462 L23: 1.5377 REMARK 3 S TENSOR REMARK 3 S11: -0.1570 S12: 0.0596 S13: 0.0658 REMARK 3 S21: -0.0360 S22: 0.0451 S23: -0.3905 REMARK 3 S31: -0.1950 S32: 1.1285 S33: 0.1204 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 97:115) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8131 59.2844 61.2811 REMARK 3 T TENSOR REMARK 3 T11: 0.1450 T22: 0.1350 REMARK 3 T33: 0.1794 T12: 0.0055 REMARK 3 T13: -0.0326 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.3597 L22: 1.8889 REMARK 3 L33: 3.4594 L12: -0.5098 REMARK 3 L13: 0.9796 L23: 0.3056 REMARK 3 S TENSOR REMARK 3 S11: -0.2048 S12: 0.0145 S13: 0.3496 REMARK 3 S21: 0.1041 S22: 0.1000 S23: -0.1035 REMARK 3 S31: -0.0841 S32: 0.0643 S33: 0.1265 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 116:128) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4935 62.5258 58.6864 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.1656 REMARK 3 T33: 0.1682 T12: -0.0243 REMARK 3 T13: -0.0547 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 3.7672 L22: 7.0612 REMARK 3 L33: 4.6403 L12: 1.1794 REMARK 3 L13: -0.4020 L23: -2.1419 REMARK 3 S TENSOR REMARK 3 S11: -0.1135 S12: 0.1050 S13: 0.2882 REMARK 3 S21: 0.1132 S22: 0.0660 S23: -0.0714 REMARK 3 S31: -0.3635 S32: -0.2454 S33: 0.0772 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 129:145) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8427 47.1166 75.4155 REMARK 3 T TENSOR REMARK 3 T11: 0.2770 T22: 0.1939 REMARK 3 T33: 0.1528 T12: 0.0661 REMARK 3 T13: -0.0098 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 5.9659 L22: 3.1290 REMARK 3 L33: 4.6962 L12: -0.1631 REMARK 3 L13: -2.0425 L23: 0.4785 REMARK 3 S TENSOR REMARK 3 S11: -0.2496 S12: -0.2134 S13: -0.3494 REMARK 3 S21: 0.6945 S22: 0.3881 S23: -0.0153 REMARK 3 S31: 0.5062 S32: -0.0116 S33: -0.1150 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 146:160) REMARK 3 ORIGIN FOR THE GROUP (A): 44.0973 55.6764 73.3625 REMARK 3 T TENSOR REMARK 3 T11: 0.1580 T22: 0.1632 REMARK 3 T33: 0.2046 T12: 0.0311 REMARK 3 T13: -0.0366 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 1.5695 L22: 4.0562 REMARK 3 L33: 0.5260 L12: -2.4613 REMARK 3 L13: 0.8600 L23: -1.2766 REMARK 3 S TENSOR REMARK 3 S11: -0.3220 S12: -0.2333 S13: 0.2765 REMARK 3 S21: 0.2775 S22: 0.3016 S23: -0.3513 REMARK 3 S31: -0.0188 S32: -0.0935 S33: 0.0173 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 161:174) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5346 55.9912 66.7597 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.1678 REMARK 3 T33: 0.1146 T12: -0.0270 REMARK 3 T13: -0.0149 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 4.2119 L22: 5.9598 REMARK 3 L33: 3.5168 L12: 1.0709 REMARK 3 L13: -0.0507 L23: -0.2908 REMARK 3 S TENSOR REMARK 3 S11: 0.0729 S12: -0.0587 S13: 0.0330 REMARK 3 S21: 0.0160 S22: 0.0231 S23: 0.5741 REMARK 3 S31: 0.1736 S32: -0.3432 S33: -0.1138 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 182:189) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7135 49.0474 75.2004 REMARK 3 T TENSOR REMARK 3 T11: 0.3573 T22: 0.3165 REMARK 3 T33: 0.2992 T12: -0.0266 REMARK 3 T13: -0.0463 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 2.7210 L22: 3.3803 REMARK 3 L33: 3.4097 L12: 2.9155 REMARK 3 L13: -3.0179 L23: -3.1537 REMARK 3 S TENSOR REMARK 3 S11: 0.2115 S12: -0.1029 S13: -0.7838 REMARK 3 S21: 0.4170 S22: -0.2384 S23: -0.2352 REMARK 3 S31: 1.0277 S32: -0.4551 S33: -0.0278 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 190:210) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0262 51.9960 68.8830 REMARK 3 T TENSOR REMARK 3 T11: 0.1907 T22: 0.1952 REMARK 3 T33: 0.1081 T12: -0.0253 REMARK 3 T13: -0.0336 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.4577 L22: 3.5812 REMARK 3 L33: 2.4987 L12: 0.4748 REMARK 3 L13: 0.4846 L23: 1.4175 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.1921 S13: -0.0710 REMARK 3 S21: 0.0806 S22: 0.0586 S23: 0.0076 REMARK 3 S31: 0.3018 S32: -0.3347 S33: -0.1095 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 211:220) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6402 50.1632 67.7005 REMARK 3 T TENSOR REMARK 3 T11: 0.2316 T22: 0.3583 REMARK 3 T33: 0.2081 T12: -0.0843 REMARK 3 T13: 0.0030 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.6696 L22: 4.2603 REMARK 3 L33: 6.0779 L12: 3.8357 REMARK 3 L13: -1.0674 L23: 0.1377 REMARK 3 S TENSOR REMARK 3 S11: 0.2976 S12: -0.6832 S13: 0.4857 REMARK 3 S21: 0.4682 S22: -0.2813 S23: 0.6175 REMARK 3 S31: 0.2322 S32: -0.6647 S33: -0.0683 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 221:232) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8237 39.8637 58.3851 REMARK 3 T TENSOR REMARK 3 T11: 0.1904 T22: 0.1777 REMARK 3 T33: 0.2412 T12: -0.0459 REMARK 3 T13: -0.0717 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 2.1130 L22: 8.9228 REMARK 3 L33: 3.1432 L12: 1.6740 REMARK 3 L13: -0.3468 L23: 4.3209 REMARK 3 S TENSOR REMARK 3 S11: 0.1099 S12: -0.0453 S13: -0.1750 REMARK 3 S21: 0.3597 S22: 0.0693 S23: -0.6739 REMARK 3 S31: 0.2922 S32: -0.0487 S33: -0.1510 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN A AND RESID 233:244) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2137 44.6943 58.1990 REMARK 3 T TENSOR REMARK 3 T11: 0.1900 T22: 0.1910 REMARK 3 T33: 0.1764 T12: -0.0846 REMARK 3 T13: 0.0068 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 4.4835 L22: 2.1241 REMARK 3 L33: 5.8233 L12: -1.4722 REMARK 3 L13: 0.3523 L23: 2.7228 REMARK 3 S TENSOR REMARK 3 S11: 0.1249 S12: -0.5374 S13: 0.2725 REMARK 3 S21: 0.5983 S22: -0.2110 S23: 0.0743 REMARK 3 S31: 0.0042 S32: -0.3281 S33: 0.1233 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5G2I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-APR-16. REMARK 100 THE DEPOSITION ID IS D_1290066286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35940 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 21.00 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 21.40 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5G1T REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5 0.8 M NAH2PO4 0.8 M REMARK 280 KH2PO4, PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.43000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.86000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.64500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 101.07500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.21500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.43000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 80.86000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 101.07500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.64500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 20.21500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2046 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 15C REMARK 465 LEU A 15D REMARK 465 HIS A 15E REMARK 465 GLN A 15F REMARK 465 GLY A 15G REMARK 465 ASP A 15H REMARK 465 TYR A 15I REMARK 465 ALA A 15J REMARK 465 ARG A 15K REMARK 465 ARG A 175 REMARK 465 ASP A 176 REMARK 465 GLY A 177 REMARK 465 THR A 178 REMARK 465 LEU A 179 REMARK 465 ALA A 180 REMARK 465 GLY A 181 REMARK 465 VAL A 245 REMARK 465 LYS A 246 REMARK 465 GLY A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 149 O HOH A 2084 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 54.92 -117.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1247 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 205 O REMARK 620 2 PO4 A1246 O3 123.3 REMARK 620 3 PO4 A1246 O3 123.8 13.1 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1247 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5G2H RELATED DB: PDB REMARK 900 S. ENTERICA HISA WITH MUTATION L169R DBREF1 5G2I A 1 245 UNP A0A630AQ07_SALER DBREF2 5G2I A A0A630AQ07 1 245 SEQADV 5G2I VAL A 15A UNP A0A630AQ0 INSERTION SEQADV 5G2I VAL A 15B UNP A0A630AQ0 INSERTION SEQADV 5G2I ARG A 15C UNP A0A630AQ0 INSERTION SEQADV 5G2I LYS A 246 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I GLY A 247 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 248 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 249 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 250 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 251 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 252 UNP A0A630AQ0 EXPRESSION TAG SEQADV 5G2I HIS A 253 UNP A0A630AQ0 EXPRESSION TAG SEQRES 1 A 256 MET ILE ILE PRO ALA LEU ASP LEU ILE ASP GLY THR VAL SEQRES 2 A 256 VAL ARG VAL VAL ARG LEU HIS GLN GLY ASP TYR ALA ARG SEQRES 3 A 256 GLN ARG ASP TYR GLY ASN ASP PRO LEU PRO ARG LEU GLN SEQRES 4 A 256 ASP TYR ALA ALA GLN GLY ALA GLY VAL LEU HIS LEU VAL SEQRES 5 A 256 ASP LEU THR GLY ALA LYS ASP PRO ALA LYS ARG GLN ILE SEQRES 6 A 256 PRO LEU ILE LYS THR LEU VAL ALA GLY VAL ASN VAL PRO SEQRES 7 A 256 VAL GLN VAL GLY GLY GLY VAL ARG THR GLU GLU ASP VAL SEQRES 8 A 256 ALA ALA LEU LEU LYS ALA GLY VAL ALA ARG VAL VAL ILE SEQRES 9 A 256 GLY SER THR ALA VAL LYS SER PRO ASP VAL VAL LYS GLY SEQRES 10 A 256 TRP PHE GLU ARG PHE GLY ALA GLN ALA LEU VAL LEU ALA SEQRES 11 A 256 LEU ASP VAL ARG ILE ASP GLU HIS GLY THR LYS GLN VAL SEQRES 12 A 256 ALA VAL SER GLY TRP GLN GLU ASN SER GLY VAL SER LEU SEQRES 13 A 256 GLU GLN LEU VAL GLU THR TYR LEU PRO VAL GLY LEU LYS SEQRES 14 A 256 HIS VAL LEU CYS THR ASP ILE SER ARG ASP GLY THR LEU SEQRES 15 A 256 ALA GLY SER ASN VAL SER LEU TYR GLU GLU VAL CYS ALA SEQRES 16 A 256 ARG TYR PRO GLN ILE ALA PHE GLN SER SER GLY GLY ILE SEQRES 17 A 256 GLY ASP ILE ASP ASP ILE ALA ALA LEU ARG GLY THR GLY SEQRES 18 A 256 VAL ARG GLY VAL ILE VAL GLY ARG ALA LEU LEU GLU GLY SEQRES 19 A 256 LYS PHE THR VAL LYS GLU ALA ILE GLN CYS TRP GLN ASN SEQRES 20 A 256 VAL LYS GLY HIS HIS HIS HIS HIS HIS HET PO4 A1245 5 HET PO4 A1246 10 HET NA A1247 1 HETNAM PO4 PHOSPHATE ION HETNAM NA SODIUM ION FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 NA NA 1+ FORMUL 5 HOH *124(H2 O) HELIX 1 1 ASP A 30 GLN A 41 1 12 HELIX 2 2 LEU A 51 ASP A 56 1 6 HELIX 3 3 PRO A 57 ARG A 60 5 4 HELIX 4 4 GLN A 61 GLY A 71 1 11 HELIX 5 5 THR A 84 ALA A 94 1 11 HELIX 6 6 GLY A 102 SER A 108 1 7 HELIX 7 7 SER A 108 GLY A 120 1 13 HELIX 8 8 SER A 152 LEU A 161 1 10 HELIX 9 9 PRO A 162 GLY A 164 5 3 HELIX 10 10 SER A 182 TYR A 194 1 13 HELIX 11 11 ASP A 207 ALA A 213 1 7 HELIX 12 12 GLY A 225 GLU A 230 1 6 HELIX 13 13 THR A 234 ASN A 244 1 11 SHEET 1 AA 7 ARG A 25 ASP A 26 0 SHEET 2 AA 7 THR A 12 ARG A 15 1 O ARG A 15 N ARG A 25 SHEET 3 AA 7 ILE A 2 ILE A 9 -1 O ASP A 7 N VAL A 14 SHEET 4 AA 7 GLY A 221 VAL A 224 1 O VAL A 222 N ILE A 3 SHEET 5 AA 7 ALA A 198 SER A 202 1 O SER A 201 N ILE A 223 SHEET 6 AA 7 HIS A 167 ASP A 172 1 O VAL A 168 N GLN A 200 SHEET 7 AA 7 LEU A 124 ILE A 132 1 O LEU A 126 N LEU A 169 SHEET 1 AB 2 ARG A 25 ASP A 26 0 SHEET 2 AB 2 LEU A 124 ILE A 132 1 O VAL A 125 N ILE A 101 LINK O ILE A 205 NA NA A1247 1555 1555 2.80 LINK O3 APO4 A1246 NA NA A1247 1555 1555 2.71 LINK O3 BPO4 A1246 NA NA A1247 1555 1555 2.39 SITE 1 AC1 6 GLY A 81 ARG A 83 GLY A 102 SER A 103 SITE 2 AC1 6 HOH A2047 HOH A2048 SITE 1 AC2 3 GLY A 225 ARG A 226 NA A1247 SITE 1 AC3 5 ILE A 205 GLY A 225 ARG A 226 ALA A 227 SITE 2 AC3 5 PO4 A1246 CRYST1 86.610 86.610 121.290 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011546 0.006666 0.000000 0.00000 SCALE2 0.000000 0.013332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008245 0.00000