HEADER OXIDOREDUCTASE 11-APR-16 5G2O TITLE YERSINIA PESTIS FABV VARIANT T276A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENR; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: FABV, YPO4104, Y4119, YP_4011; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM15B KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PSCHIBUL,J.KUPER,M.HIRSCHBECK,C.KISKER REVDAT 4 10-JAN-24 5G2O 1 REMARK REVDAT 3 25-SEP-19 5G2O 1 COMPND SOURCE DBREF SEQADV REVDAT 3 2 1 ATOM REVDAT 2 15-JUN-16 5G2O 1 JRNL REVDAT 1 25-MAY-16 5G2O 0 JRNL AUTH C.NECKLES,A.PSCHIBUL,C.LAI,M.HIRSCHBECK,J.KUPER,S.DAVOODI, JRNL AUTH 2 J.ZOU,N.LIU,P.PAN,S.SHAH,F.DARYAEE,G.R.BOMMINENI,C.LAI, JRNL AUTH 3 C.SIMMERLING,C.KISKER,P.J.TONGE JRNL TITL SELECTIVITY OF PYRIDONE- AND DIPHENYL ETHER-BASED INHIBITORS JRNL TITL 2 FOR THE YERSINIA PESTIS FABV ENOYL-ACP REDUCTASE. JRNL REF BIOCHEMISTRY V. 55 2992 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27136302 JRNL DOI 10.1021/ACS.BIOCHEM.5B01301 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 41171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6802 - 4.6842 1.00 2771 119 0.1598 0.1818 REMARK 3 2 4.6842 - 3.7186 1.00 2644 150 0.1345 0.1610 REMARK 3 3 3.7186 - 3.2487 1.00 2635 126 0.1626 0.1924 REMARK 3 4 3.2487 - 2.9517 1.00 2606 149 0.1794 0.2493 REMARK 3 5 2.9517 - 2.7402 1.00 2618 135 0.1861 0.2003 REMARK 3 6 2.7402 - 2.5786 1.00 2609 137 0.1765 0.2209 REMARK 3 7 2.5786 - 2.4495 1.00 2576 152 0.1795 0.2110 REMARK 3 8 2.4495 - 2.3429 1.00 2577 135 0.1834 0.2401 REMARK 3 9 2.3429 - 2.2527 1.00 2593 146 0.1932 0.2134 REMARK 3 10 2.2527 - 2.1750 1.00 2605 139 0.2040 0.2716 REMARK 3 11 2.1750 - 2.1070 1.00 2567 128 0.2109 0.2591 REMARK 3 12 2.1070 - 2.0467 1.00 2591 156 0.2256 0.2476 REMARK 3 13 2.0467 - 1.9929 1.00 2556 123 0.2465 0.2972 REMARK 3 14 1.9929 - 1.9442 1.00 2591 129 0.2762 0.2748 REMARK 3 15 1.9442 - 1.9000 1.00 2567 141 0.3020 0.3374 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3583 REMARK 3 ANGLE : 0.722 4871 REMARK 3 CHIRALITY : 0.046 538 REMARK 3 PLANARITY : 0.003 657 REMARK 3 DIHEDRAL : 11.705 2164 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -5 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4155 -38.8390 1.0188 REMARK 3 T TENSOR REMARK 3 T11: 0.1386 T22: 0.2420 REMARK 3 T33: 0.1416 T12: -0.0756 REMARK 3 T13: -0.0256 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 2.6866 L22: 1.5979 REMARK 3 L33: 2.1817 L12: 1.1078 REMARK 3 L13: 0.9028 L23: -0.0386 REMARK 3 S TENSOR REMARK 3 S11: 0.0134 S12: 0.0112 S13: 0.0314 REMARK 3 S21: 0.1409 S22: -0.0699 S23: -0.0081 REMARK 3 S31: -0.1949 S32: 0.3291 S33: 0.0201 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5865 -29.6112 -10.0023 REMARK 3 T TENSOR REMARK 3 T11: 0.3477 T22: 0.2983 REMARK 3 T33: 0.4252 T12: -0.0674 REMARK 3 T13: -0.1515 T23: 0.0926 REMARK 3 L TENSOR REMARK 3 L11: 3.0132 L22: 1.3093 REMARK 3 L33: 1.5954 L12: 1.5961 REMARK 3 L13: 0.7727 L23: -0.0120 REMARK 3 S TENSOR REMARK 3 S11: -0.4827 S12: 0.2126 S13: 0.7687 REMARK 3 S21: -0.1675 S22: 0.0961 S23: 0.4114 REMARK 3 S31: -0.5375 S32: -0.0629 S33: 0.0989 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6831 -38.3354 -17.0737 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.3250 REMARK 3 T33: 0.1630 T12: -0.0786 REMARK 3 T13: -0.0550 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.5393 L22: 2.5336 REMARK 3 L33: 1.2456 L12: 1.7662 REMARK 3 L13: -0.2455 L23: -0.2964 REMARK 3 S TENSOR REMARK 3 S11: -0.2129 S12: 0.3990 S13: 0.1668 REMARK 3 S21: -0.2354 S22: 0.2631 S23: 0.3332 REMARK 3 S31: -0.1207 S32: 0.1573 S33: -0.0754 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0454 -48.4525 -9.4983 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: 0.2560 REMARK 3 T33: 0.1642 T12: -0.0095 REMARK 3 T13: 0.0178 T23: -0.0587 REMARK 3 L TENSOR REMARK 3 L11: 2.3330 L22: 1.6893 REMARK 3 L33: 2.1681 L12: 1.0596 REMARK 3 L13: 0.7301 L23: 0.0164 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: 0.3679 S13: -0.2108 REMARK 3 S21: -0.1834 S22: 0.1457 S23: 0.0254 REMARK 3 S31: 0.1310 S32: 0.1376 S33: -0.0287 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5G2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-APR-16. REMARK 100 THE DEPOSITION ID IS D_1290066678. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918010 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41201 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 1.08000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4BKR REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM (NH4)2SO4 25-38% PEG 4000 100 REMARK 280 MM MES PH 5.5, PH 5.6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.12833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.25667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.25667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.12833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2317 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2041 O HOH A 2093 2.04 REMARK 500 O HOH A 2212 O HOH A 2213 2.08 REMARK 500 O HOH A 2016 O HOH A 2017 2.12 REMARK 500 O2A NAI A 1400 O HOH A 2221 2.13 REMARK 500 O HOH A 2080 O HOH A 2178 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2213 O HOH A 2213 6554 1.86 REMARK 500 O HOH A 2146 O HOH A 2147 6555 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 10 23.73 -140.95 REMARK 500 PHE A 10 -1.87 85.71 REMARK 500 GLU A 228 -150.43 -135.79 REMARK 500 HIS A 261 70.68 -100.80 REMARK 500 HIS A 323 74.83 -105.73 REMARK 500 ASP A 362 49.52 -99.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1402 DBREF 5G2O A 1 399 UNP Q8Z9U1 FABV_YERPE 1 399 SEQADV 5G2O ARG A -6 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O GLY A -5 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O SER A -4 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O HIS A -3 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O MET A -2 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O LEU A -1 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O GLU A 0 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5G2O ALA A 276 UNP Q8Z9U1 THR 276 ENGINEERED MUTATION SEQRES 1 A 406 ARG GLY SER HIS MET LEU GLU MET ILE ILE LYS PRO ARG SEQRES 2 A 406 VAL ARG GLY PHE ILE CYS VAL THR ALA HIS PRO THR GLY SEQRES 3 A 406 CYS GLU ALA ASN VAL LYS LYS GLN ILE ASP TYR VAL THR SEQRES 4 A 406 THR GLU GLY PRO ILE ALA ASN GLY PRO LYS ARG VAL LEU SEQRES 5 A 406 VAL ILE GLY ALA SER THR GLY TYR GLY LEU ALA ALA ARG SEQRES 6 A 406 ILE THR ALA ALA PHE GLY CYS GLY ALA ASP THR LEU GLY SEQRES 7 A 406 VAL PHE PHE GLU ARG PRO GLY GLU GLU GLY LYS PRO GLY SEQRES 8 A 406 THR SER GLY TRP TYR ASN SER ALA ALA PHE HIS LYS PHE SEQRES 9 A 406 ALA ALA GLN LYS GLY LEU TYR ALA LYS SER ILE ASN GLY SEQRES 10 A 406 ASP ALA PHE SER ASP GLU ILE LYS GLN LEU THR ILE ASP SEQRES 11 A 406 ALA ILE LYS GLN ASP LEU GLY GLN VAL ASP GLN VAL ILE SEQRES 12 A 406 TYR SER LEU ALA SER PRO ARG ARG THR HIS PRO LYS THR SEQRES 13 A 406 GLY GLU VAL PHE ASN SER ALA LEU LYS PRO ILE GLY ASN SEQRES 14 A 406 ALA VAL ASN LEU ARG GLY LEU ASP THR ASP LYS GLU VAL SEQRES 15 A 406 ILE LYS GLU SER VAL LEU GLN PRO ALA THR GLN SER GLU SEQRES 16 A 406 ILE ASP SER THR VAL ALA VAL MET GLY GLY GLU ASP TRP SEQRES 17 A 406 GLN MET TRP ILE ASP ALA LEU LEU ASP ALA GLY VAL LEU SEQRES 18 A 406 ALA GLU GLY ALA GLN THR THR ALA PHE THR TYR LEU GLY SEQRES 19 A 406 GLU LYS ILE THR HIS ASP ILE TYR TRP ASN GLY SER ILE SEQRES 20 A 406 GLY ALA ALA LYS LYS ASP LEU ASP GLN LYS VAL LEU ALA SEQRES 21 A 406 ILE ARG GLU SER LEU ALA ALA HIS GLY GLY GLY ASP ALA SEQRES 22 A 406 ARG VAL SER VAL LEU LYS ALA VAL VAL ALA GLN ALA SER SEQRES 23 A 406 SER ALA ILE PRO MET MET PRO LEU TYR LEU SER LEU LEU SEQRES 24 A 406 PHE LYS VAL MET LYS GLU LYS GLY THR HIS GLU GLY CYS SEQRES 25 A 406 ILE GLU GLN VAL TYR SER LEU TYR LYS ASP SER LEU CYS SEQRES 26 A 406 GLY ASP SER PRO HIS MET ASP GLN GLU GLY ARG LEU ARG SEQRES 27 A 406 ALA ASP TYR LYS GLU LEU ASP PRO GLU VAL GLN ASN GLN SEQRES 28 A 406 VAL GLN GLN LEU TRP ASP GLN VAL THR ASN ASP ASN ILE SEQRES 29 A 406 TYR GLN LEU THR ASP PHE VAL GLY TYR LYS SER GLU PHE SEQRES 30 A 406 LEU ASN LEU PHE GLY PHE GLY ILE ASP GLY VAL ASP TYR SEQRES 31 A 406 ASP ALA ASP VAL ASN PRO ASP VAL LYS ILE PRO ASN LEU SEQRES 32 A 406 ILE GLN GLY HET NAI A1400 73 HET DMS A1401 10 HET DMS A1402 10 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM DMS DIMETHYL SULFOXIDE HETSYN NAI NADH FORMUL 2 NAI C21 H29 N7 O14 P2 FORMUL 3 DMS 2(C2 H6 O S) FORMUL 5 HOH *325(H2 O) HELIX 1 1 HIS A 16 GLY A 35 1 20 HELIX 2 2 THR A 51 GLY A 66 1 16 HELIX 3 3 THR A 85 LYS A 101 1 17 HELIX 4 4 SER A 114 LEU A 129 1 16 HELIX 5 5 THR A 185 GLY A 197 1 13 HELIX 6 6 GLY A 198 GLY A 212 1 15 HELIX 7 7 GLU A 228 ILE A 230 5 3 HELIX 8 8 THR A 231 TRP A 236 1 6 HELIX 9 9 GLY A 238 ALA A 260 1 23 HELIX 10 10 ALA A 278 ILE A 282 5 5 HELIX 11 11 PRO A 283 GLY A 300 1 18 HELIX 12 12 GLY A 304 SER A 316 1 13 HELIX 13 13 ASP A 338 ASP A 350 1 13 HELIX 14 14 ASN A 356 THR A 361 1 6 HELIX 15 15 ASP A 362 PHE A 374 1 13 SHEET 1 AA 2 VAL A 7 ARG A 8 0 SHEET 2 AA 2 ILE A 11 CYS A 12 -1 O ILE A 11 N ARG A 8 SHEET 1 AB 8 ARG A 329 ARG A 331 0 SHEET 2 AB 8 ASP A 265 VAL A 270 1 O VAL A 268 N LEU A 330 SHEET 3 AB 8 LEU A 214 THR A 224 1 O ALA A 218 N ASP A 265 SHEET 4 AB 8 VAL A 132 TYR A 137 1 O VAL A 132 N ALA A 215 SHEET 5 AB 8 ARG A 43 ILE A 47 1 O ARG A 43 N ASP A 133 SHEET 6 AB 8 ASP A 68 PHE A 73 1 O ASP A 68 N VAL A 44 SHEET 7 AB 8 ALA A 105 ASN A 109 1 O LYS A 106 N GLY A 71 SHEET 8 AB 8 LEU A 396 GLN A 398 1 O ILE A 397 N ASN A 109 SHEET 1 AC 2 ARG A 143 THR A 145 0 SHEET 2 AC 2 VAL A 152 ASN A 154 -1 O PHE A 153 N ARG A 144 SHEET 1 AD 2 VAL A 164 ASP A 170 0 SHEET 2 AD 2 VAL A 175 LEU A 181 -1 O VAL A 175 N ASP A 170 CISPEP 1 ALA A 211 GLY A 212 0 -11.18 SITE 1 AC1 33 GLY A 48 ALA A 49 SER A 50 THR A 51 SITE 2 AC1 33 GLY A 52 TYR A 53 PHE A 73 PHE A 74 SITE 3 AC1 33 GLU A 75 GLY A 110 ASP A 111 ALA A 112 SITE 4 AC1 33 SER A 138 LEU A 139 ALA A 140 SER A 141 SITE 5 AC1 33 PHE A 223 THR A 224 TYR A 225 LEU A 271 SITE 6 AC1 33 LYS A 272 ALA A 273 VAL A 274 GLN A 277 SITE 7 AC1 33 DMS A1402 HOH A2150 HOH A2156 HOH A2216 SITE 8 AC1 33 HOH A2220 HOH A2221 HOH A2222 HOH A2323 SITE 9 AC1 33 HOH A2324 SITE 1 AC2 5 ASN A 372 GLY A 377 ILE A 378 ASP A 379 SITE 2 AC2 5 HOH A2325 SITE 1 AC3 3 TYR A 225 TYR A 235 NAI A1400 CRYST1 103.156 103.156 84.385 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009694 0.005597 0.000000 0.00000 SCALE2 0.000000 0.011194 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011850 0.00000