HEADER CARBOHYDRATE BINDING PROTEIN 23-MAY-16 5G5D TITLE CRYSTAL STRUCTURE OF THE COHSCAC2-XDOCCIPA TYPE II COMPLEX FROM TITLE 2 CLOSTRIDIUM THERMOCELLUM CAVEAT 5G5D VAL A 15 C-ALPHA IS PLANAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSOME ANCHORING PROTEIN COHESIN REGION; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SECOND COHESIN DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CELLULOSOMAL-SCAFFOLDING PROTEIN A; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: DOCKERIN DOMAIN; COMPND 10 SYNONYM: CELLULOSE-INTEGRATING PROTEIN A, CELLULOSOMAL GLYCOPROTEIN COMPND 11 S1/SL, COHESIN; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM THERMOCELLUM AD2; SOURCE 3 ORGANISM_TAXID: 1138384; SOURCE 4 ATCC: 27405; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 11 ORGANISM_TAXID: 203119; SOURCE 12 ATCC: 27405; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS CARBOHYDRATE BINDING PROTEIN, COHESIN-DOCKERIN COMPLEX, TYPE II KEYWDS 2 INTERACTION, SCAFFOLDIN, CELLULOSOME, C. THERMOCELLUM EXPDTA X-RAY DIFFRACTION AUTHOR A.L.CARVALHO,J.L.A BRAS,S.H.NAJMUDIN,B.A.PINHEIRO,C.M.G.A.FONTES REVDAT 2 10-JAN-24 5G5D 1 REMARK LINK REVDAT 1 05-APR-17 5G5D 0 JRNL AUTH J.L.BRAS,B.A.PINHEIRO,K.CAMERON,F.CUSKIN,A.VIEGAS, JRNL AUTH 2 S.NAJMUDIN,P.BULE,V.M.PIRES,M.J.ROMAO,E.A.BAYER,H.L.SPENCER, JRNL AUTH 3 S.SMITH,H.J.GILBERT,V.D.ALVES,A.L.CARVALHO,C.M.FONTES JRNL TITL DIVERSE SPECIFICITY OF CELLULOSOME ATTACHMENT TO THE JRNL TITL 2 BACTERIAL CELL SURFACE. JRNL REF SCI REP V. 6 38292 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27924829 JRNL DOI 10.1038/SREP38292 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 7968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.261 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.500 REMARK 3 FREE R VALUE TEST SET COUNT : 937 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 572 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2420 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.523 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.488 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 62.591 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.908 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.870 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2473 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2386 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3362 ; 1.221 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5492 ; 1.012 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 314 ; 6.302 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;36.780 ;25.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 413 ;15.470 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;11.704 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 401 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2783 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 522 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1262 ; 0.332 ; 4.796 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1261 ; 0.332 ; 4.794 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1574 ; 0.605 ; 7.192 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1575 ; 0.604 ; 7.194 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1211 ; 0.264 ; 4.854 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1211 ; 0.264 ; 4.854 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1789 ; 0.495 ; 7.259 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10000 ; 2.477 ;45.511 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9999 ; 2.477 ;45.507 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): -12.2590 -11.9060 -9.8840 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.4943 REMARK 3 T33: 0.1260 T12: -0.3349 REMARK 3 T13: 0.0886 T23: -0.1080 REMARK 3 L TENSOR REMARK 3 L11: 4.0385 L22: 3.0026 REMARK 3 L33: 6.1882 L12: -0.0427 REMARK 3 L13: 0.2731 L23: 0.8845 REMARK 3 S TENSOR REMARK 3 S11: -0.1900 S12: 0.0078 S13: -0.4173 REMARK 3 S21: 0.1438 S22: -0.0168 S23: 0.3368 REMARK 3 S31: 1.3836 S32: -1.3466 S33: 0.2068 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 27 B 163 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1020 -17.0250 -32.7350 REMARK 3 T TENSOR REMARK 3 T11: 0.3342 T22: 0.5495 REMARK 3 T33: 0.1378 T12: -0.1389 REMARK 3 T13: 0.0320 T23: -0.2638 REMARK 3 L TENSOR REMARK 3 L11: 5.1166 L22: 2.5863 REMARK 3 L33: 1.5690 L12: -2.2354 REMARK 3 L13: -1.0936 L23: 0.8681 REMARK 3 S TENSOR REMARK 3 S11: -0.1576 S12: 0.8340 S13: -0.4751 REMARK 3 S21: 0.1083 S22: 0.1464 S23: -0.0949 REMARK 3 S31: 0.5281 S32: -0.0313 S33: 0.0112 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5G5D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1290066850. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10000 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.890 REMARK 200 RESOLUTION RANGE LOW (A) : 90.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.19000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 1.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2BM3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CACL2 0.1M HEPES 7.5 25% PEG4K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.18000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.90250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.23350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.18000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.90250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.23350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.18000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.90250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.23350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.18000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 62.90250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.23350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 LEU A 164 REMARK 465 GLU A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LYS B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 ILE B 6 REMARK 465 GLU B 7 REMARK 465 GLN B 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 13 -66.55 -100.44 REMARK 500 VAL A 15 -164.03 -129.83 REMARK 500 SER A 32 -2.17 74.14 REMARK 500 ASN A 76 75.48 63.45 REMARK 500 CYS A 95 116.93 -168.64 REMARK 500 THR B 72 -11.60 81.33 REMARK 500 ASP B 86 86.66 -66.33 REMARK 500 ASP B 106 19.68 -140.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1165 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 104 O REMARK 620 2 ASP B 106 OD1 92.0 REMARK 620 3 SER B 108 O 135.7 82.2 REMARK 620 4 ASP B 113 OD1 80.6 167.1 110.5 REMARK 620 5 ASP B 113 OD2 127.2 137.9 79.0 46.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1164 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 135 OD1 REMARK 620 2 ASN B 137 OD1 73.7 REMARK 620 3 ASN B 139 OD1 98.9 71.5 REMARK 620 4 ALA B 141 O 91.9 161.0 99.4 REMARK 620 5 ASP B 146 OD2 103.2 116.2 157.8 78.6 REMARK 620 6 ASP B 146 OD1 91.0 70.0 135.4 123.7 46.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1165 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST 3 RESIDUES WERE INTRODUCED FROM THE VECTOR. THE REMARK 999 FIRST 4 AND LAST FIVE RESIDUES ARE NOT OBSERVED IN THE REMARK 999 ELECTRON DENSITY. REMARK 999 A 19 RESIDUE TAG WAS INTRODUCED IN THE N-TERMINAL. THE 25 REMARK 999 RESIDUES FROM THE N_TERMINAL ARE NOT OBSERVED IN ELECTRON REMARK 999 DENSITY AS WELL THE LAST C-TERMINAL RESIDUE. DBREF1 5G5D A 4 163 UNP A0A0U3TQ90_CLOTM DBREF2 5G5D A A0A0U3TQ90 205 364 DBREF 5G5D B 2 164 UNP Q06851 CIPA_CLOTH 1691 1853 SEQADV 5G5D MET A 1 UNP A0A0U3TQ9 INITIATING METHIONINE SEQADV 5G5D ALA A 2 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D SER A 3 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D LEU A 164 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D GLU A 165 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 166 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 167 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 168 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 169 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 170 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D HIS A 171 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5G5D MET B 1 UNP Q06851 EXPRESSION TAG SEQADV 5G5D LYS B 102 UNP Q06851 ASP 1791 CONFLICT SEQRES 1 A 171 MET ALA SER ALA HIS ILE ALA LEU GLU LEU ASP LYS THR SEQRES 2 A 171 LYS VAL LYS VAL GLY ASP VAL ILE VAL ALA THR VAL LYS SEQRES 3 A 171 ALA LYS ASN MET THR SER MET ALA GLY ILE GLN VAL ASN SEQRES 4 A 171 ILE LYS TYR ASP PRO GLU VAL LEU GLN ALA ILE ASP PRO SEQRES 5 A 171 ALA THR GLY LYS PRO PHE THR LYS GLU THR LEU LEU VAL SEQRES 6 A 171 ASP PRO GLU LEU LEU SER ASN ARG GLU TYR ASN PRO LEU SEQRES 7 A 171 LEU THR ALA VAL ASN ASP ILE ASN SER GLY ILE ILE ASN SEQRES 8 A 171 TYR ALA SER CYS TYR VAL TYR TRP ASP SER TYR ARG GLU SEQRES 9 A 171 SER GLY VAL SER GLU SER THR GLY ILE ILE GLY LYS VAL SEQRES 10 A 171 GLY PHE LYS VAL LEU LYS ALA ALA ASN THR THR VAL LYS SEQRES 11 A 171 LEU GLU GLU THR ARG PHE THR PRO ASN SER ILE ASP GLY SEQRES 12 A 171 THR LEU VAL ILE ASP TRP TYR GLY GLN GLN ILE VAL GLY SEQRES 13 A 171 TYR LYS VAL ILE GLN PRO ASP LEU GLU HIS HIS HIS HIS SEQRES 14 A 171 HIS HIS SEQRES 1 B 164 MET ASN LYS PRO VAL ILE GLU GLY TYR LYS VAL SER GLY SEQRES 2 B 164 TYR ILE LEU PRO ASP PHE SER PHE ASP ALA THR VAL ALA SEQRES 3 B 164 PRO LEU VAL LYS ALA GLY PHE LYS VAL GLU ILE VAL GLY SEQRES 4 B 164 THR GLU LEU TYR ALA VAL THR ASP ALA ASN GLY TYR PHE SEQRES 5 B 164 GLU ILE THR GLY VAL PRO ALA ASN ALA SER GLY TYR THR SEQRES 6 B 164 LEU LYS ILE SER ARG ALA THR TYR LEU ASP ARG VAL ILE SEQRES 7 B 164 ALA ASN VAL VAL VAL THR GLY ASP THR SER VAL SER THR SEQRES 8 B 164 SER GLN ALA PRO ILE MET MET TRP VAL GLY LYS ILE VAL SEQRES 9 B 164 LYS ASP ASN SER ILE ASN LEU LEU ASP VAL ALA GLU VAL SEQRES 10 B 164 ILE ARG CYS PHE ASN ALA THR LYS GLY SER ALA ASN TYR SEQRES 11 B 164 VAL GLU GLU LEU ASP ILE ASN ARG ASN GLY ALA ILE ASN SEQRES 12 B 164 MET GLN ASP ILE MET ILE VAL HIS LYS HIS PHE GLY ALA SEQRES 13 B 164 THR SER SER ASP TYR ASP ALA GLN HET CA B1164 1 HET CA B1165 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) HELIX 1 1 ASN A 72 ASN A 76 5 5 HELIX 2 2 TYR A 98 SER A 105 1 8 HELIX 3 3 ASP B 22 THR B 24 5 3 HELIX 4 4 VAL B 25 ALA B 31 1 7 HELIX 5 5 ASN B 110 ARG B 119 1 10 HELIX 6 6 VAL B 131 ASP B 135 5 5 HELIX 7 7 ASN B 143 LYS B 152 1 10 HELIX 8 8 THR B 157 TYR B 161 5 5 SHEET 1 AA 5 LEU A 47 ILE A 50 0 SHEET 2 AA 5 GLY A 112 VAL A 121 -1 O GLY A 118 N ILE A 50 SHEET 3 AA 5 VAL A 20 LYS A 28 -1 N ILE A 21 O PHE A 119 SHEET 4 AA 5 HIS A 5 LEU A 10 -1 O HIS A 5 N LYS A 28 SHEET 5 AA 5 LYS A 158 ILE A 160 1 O LYS A 158 N ILE A 6 SHEET 1 AB 4 THR A 80 ALA A 81 0 SHEET 2 AB 4 ILE A 89 CYS A 95 -1 O ALA A 93 N THR A 80 SHEET 3 AB 4 MET A 33 LYS A 41 -1 O ILE A 36 N SER A 94 SHEET 4 AB 4 LYS A 130 LEU A 131 -1 O LYS A 130 N LYS A 41 SHEET 1 AC 4 THR A 80 ALA A 81 0 SHEET 2 AC 4 ILE A 89 CYS A 95 -1 O ALA A 93 N THR A 80 SHEET 3 AC 4 MET A 33 LYS A 41 -1 O ILE A 36 N SER A 94 SHEET 4 AC 4 THR A 144 ASP A 148 -1 O LEU A 145 N GLN A 37 SHEET 1 AD 2 LYS A 130 LEU A 131 0 SHEET 2 AD 2 MET A 33 LYS A 41 -1 O LYS A 41 N LYS A 130 SHEET 1 BA 4 TYR B 51 VAL B 57 0 SHEET 2 BA 4 TYR B 9 PRO B 17 -1 O TYR B 9 N VAL B 57 SHEET 3 BA 4 ILE B 96 LYS B 102 1 O ILE B 96 N LEU B 16 SHEET 4 BA 4 THR B 72 LEU B 74 -1 O THR B 72 N GLY B 101 SHEET 1 BB 4 TYR B 43 VAL B 45 0 SHEET 2 BB 4 LYS B 34 ILE B 37 -1 O VAL B 35 N ALA B 44 SHEET 3 BB 4 ASN B 60 SER B 69 -1 O LYS B 67 N GLU B 36 SHEET 4 BB 4 ARG B 76 VAL B 83 -1 O ARG B 76 N ILE B 68 SHEET 1 BC 2 ALA B 123 THR B 124 0 SHEET 2 BC 2 ALA B 141 ILE B 142 -1 N ILE B 142 O ALA B 123 LINK O VAL B 104 CA CA B1165 1555 1555 2.34 LINK OD1 ASP B 106 CA CA B1165 1555 1555 2.67 LINK O SER B 108 CA CA B1165 1555 1555 2.35 LINK OD1 ASP B 113 CA CA B1165 1555 1555 2.87 LINK OD2 ASP B 113 CA CA B1165 1555 1555 2.55 LINK OD1 ASP B 135 CA CA B1164 1555 1555 2.43 LINK OD1 ASN B 137 CA CA B1164 1555 1555 2.53 LINK OD1 ASN B 139 CA CA B1164 1555 1555 2.42 LINK O ALA B 141 CA CA B1164 1555 1555 2.10 LINK OD2 ASP B 146 CA CA B1164 1555 1555 2.87 LINK OD1 ASP B 146 CA CA B1164 1555 1555 2.71 SITE 1 AC1 5 ASP B 135 ASN B 137 ASN B 139 ALA B 141 SITE 2 AC1 5 ASP B 146 SITE 1 AC2 5 LYS B 102 VAL B 104 ASP B 106 SER B 108 SITE 2 AC2 5 ASP B 113 CRYST1 52.360 125.805 130.467 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019099 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007665 0.00000