HEADER HYDROLASE 02-JUN-16 5G5R TITLE CBS DOMAIN TANDEM OF SITE-2 PROTEASE FROM ARCHAEOGLOBUS FULGIDUS IN TITLE 2 COMPLEX WITH LLAMA NANOBODY - APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SITE-2 PROTEASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: REGULATORY DOMAIN, RESIDUES 236-362; COMPND 5 EC: 3.4.24.85; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: C-TERMINAL STREPII-TAG; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NANOBODY; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: NB330 SELECTED FROM LLAMA GLAMA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 ATCC: 49558; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET-DERIVATIVE PSTREP-1; SOURCE 11 OTHER_DETAILS: DSM4304 GENOMIC DNA; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 14 ORGANISM_COMMON: LLAMA; SOURCE 15 ORGANISM_TAXID: 9844; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 19 EXPRESSION_SYSTEM_VARIANT: WK6; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PHEN6 KEYWDS HYDROLASE, METALLOPROTEASE, SITE-2 PROTEASE, REGULATORY DOMAIN, KEYWDS 2 NUCLEOTIDE-BINDING, CBS DOMAIN, CAMELID ANTIBODY, NANOBODY EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHACHERL,U.BAUMANN REVDAT 3 10-JAN-24 5G5R 1 REMARK REVDAT 2 19-JUL-17 5G5R 1 REVDAT 1 24-MAY-17 5G5R 0 JRNL AUTH M.SCHACHERL,M.GOMPERT,E.PARDON,T.LAMKEMEYER,J.STEYAERT, JRNL AUTH 2 U.BAUMANN JRNL TITL CRYSTALLOGRAPHIC AND BIOCHEMICAL CHARACTERIZATION OF THE JRNL TITL 2 DIMERIC ARCHITECTURE OF SITE-2 PROTEASE. JRNL REF BIOCHIM. BIOPHYS. ACTA V.1859 1859 2017 JRNL REFN ISSN 0006-3002 JRNL PMID 28502790 JRNL DOI 10.1016/J.BBAMEM.2017.05.006 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 11381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 569 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9860 - 3.8094 1.00 2870 151 0.1780 0.2041 REMARK 3 2 3.8094 - 3.0239 1.00 2697 142 0.2158 0.2841 REMARK 3 3 3.0239 - 2.6417 1.00 2623 138 0.2617 0.3204 REMARK 3 4 2.6417 - 2.4002 0.99 2622 138 0.2768 0.3155 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1890 REMARK 3 ANGLE : 0.443 2561 REMARK 3 CHIRALITY : 0.043 290 REMARK 3 PLANARITY : 0.003 329 REMARK 3 DIHEDRAL : 12.348 1124 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8453 -12.9447 -6.7166 REMARK 3 T TENSOR REMARK 3 T11: 0.4388 T22: 0.3402 REMARK 3 T33: 0.4201 T12: 0.0015 REMARK 3 T13: -0.0208 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 2.8001 L22: 2.8028 REMARK 3 L33: 5.5821 L12: -0.2623 REMARK 3 L13: 0.5522 L23: -0.4289 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0393 S13: 0.0086 REMARK 3 S21: 0.0750 S22: 0.1217 S23: -0.1022 REMARK 3 S31: 0.0583 S32: 0.3446 S33: -0.0772 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0044 -18.2284 -19.1484 REMARK 3 T TENSOR REMARK 3 T11: 0.7131 T22: 0.9641 REMARK 3 T33: 0.6525 T12: 0.0215 REMARK 3 T13: 0.2329 T23: 0.0702 REMARK 3 L TENSOR REMARK 3 L11: 2.6200 L22: 5.5026 REMARK 3 L33: 2.1569 L12: -3.3677 REMARK 3 L13: 0.2700 L23: 1.1548 REMARK 3 S TENSOR REMARK 3 S11: -0.2070 S12: 1.4692 S13: -0.6381 REMARK 3 S21: -1.5791 S22: -0.5786 S23: -1.0464 REMARK 3 S31: 0.7714 S32: 1.4539 S33: 0.0184 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5022 -20.4991 2.4403 REMARK 3 T TENSOR REMARK 3 T11: 0.5265 T22: 0.5492 REMARK 3 T33: 0.4673 T12: 0.0706 REMARK 3 T13: 0.0012 T23: 0.1058 REMARK 3 L TENSOR REMARK 3 L11: 1.2781 L22: 3.1938 REMARK 3 L33: 7.5526 L12: 0.3689 REMARK 3 L13: -0.3434 L23: 4.0971 REMARK 3 S TENSOR REMARK 3 S11: 0.1756 S12: -0.2460 S13: -0.3882 REMARK 3 S21: 0.3534 S22: 0.0210 S23: -0.1357 REMARK 3 S31: 1.9030 S32: 0.3968 S33: 0.1706 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 309 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5060 -15.1343 7.0116 REMARK 3 T TENSOR REMARK 3 T11: 0.6231 T22: 0.4714 REMARK 3 T33: 0.4558 T12: 0.0067 REMARK 3 T13: -0.0033 T23: 0.1060 REMARK 3 L TENSOR REMARK 3 L11: 1.9387 L22: 4.0575 REMARK 3 L33: 5.1972 L12: 0.2248 REMARK 3 L13: 3.0484 L23: 0.0442 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.6257 S13: -0.3146 REMARK 3 S21: -0.1483 S22: -0.1900 S23: -0.1330 REMARK 3 S31: -0.0309 S32: 0.6235 S33: 0.2373 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2658 -2.1019 11.8428 REMARK 3 T TENSOR REMARK 3 T11: 0.4809 T22: 0.5882 REMARK 3 T33: 0.6419 T12: -0.0966 REMARK 3 T13: -0.0313 T23: 0.0860 REMARK 3 L TENSOR REMARK 3 L11: 1.8284 L22: 5.4607 REMARK 3 L33: 3.1933 L12: 0.9988 REMARK 3 L13: 1.3042 L23: 1.9225 REMARK 3 S TENSOR REMARK 3 S11: 0.3005 S12: -0.2981 S13: 0.2677 REMARK 3 S21: 0.1810 S22: -0.5210 S23: -0.8473 REMARK 3 S31: -0.0733 S32: 0.2084 S33: 0.1485 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6721 -2.2273 -4.4887 REMARK 3 T TENSOR REMARK 3 T11: 0.7183 T22: 0.6990 REMARK 3 T33: 0.6000 T12: 0.1303 REMARK 3 T13: -0.0015 T23: -0.1829 REMARK 3 L TENSOR REMARK 3 L11: 6.7325 L22: 3.7979 REMARK 3 L33: 6.8032 L12: 5.3274 REMARK 3 L13: 0.0561 L23: 0.4221 REMARK 3 S TENSOR REMARK 3 S11: 0.3510 S12: -0.2414 S13: 1.0990 REMARK 3 S21: -0.6077 S22: -0.3760 S23: 1.5425 REMARK 3 S31: -1.6050 S32: 0.1332 S33: -0.1274 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.4142 -11.7665 -7.7658 REMARK 3 T TENSOR REMARK 3 T11: 0.5247 T22: 0.4850 REMARK 3 T33: 0.6355 T12: -0.0105 REMARK 3 T13: 0.0044 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 3.1071 L22: 4.2298 REMARK 3 L33: 3.7314 L12: 2.4326 REMARK 3 L13: -0.6282 L23: -0.1118 REMARK 3 S TENSOR REMARK 3 S11: -0.6575 S12: 0.6450 S13: 0.2416 REMARK 3 S21: -0.2120 S22: 0.4952 S23: 0.0971 REMARK 3 S31: -0.3460 S32: -0.3666 S33: 0.2258 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6607 -15.3911 -2.7770 REMARK 3 T TENSOR REMARK 3 T11: 0.4249 T22: 0.3259 REMARK 3 T33: 0.3567 T12: -0.1269 REMARK 3 T13: -0.0460 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 9.2497 L22: 5.4512 REMARK 3 L33: 8.8063 L12: -0.4020 REMARK 3 L13: -1.6793 L23: 1.1614 REMARK 3 S TENSOR REMARK 3 S11: 0.2337 S12: -0.7144 S13: -0.0023 REMARK 3 S21: 0.4251 S22: -0.3327 S23: -0.0766 REMARK 3 S31: 0.1242 S32: 0.1127 S33: 0.1063 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.9089 -20.6344 -9.9421 REMARK 3 T TENSOR REMARK 3 T11: 0.4907 T22: 0.3690 REMARK 3 T33: 0.4765 T12: -0.0760 REMARK 3 T13: 0.0159 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 3.5506 L22: 1.8566 REMARK 3 L33: 7.1128 L12: -0.6134 REMARK 3 L13: 0.2685 L23: -1.1102 REMARK 3 S TENSOR REMARK 3 S11: 0.1995 S12: 0.2029 S13: -0.0276 REMARK 3 S21: 0.3069 S22: -0.4440 S23: 0.3110 REMARK 3 S31: 0.1441 S32: -0.1441 S33: 0.0999 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.6341 -16.1452 -6.0488 REMARK 3 T TENSOR REMARK 3 T11: 0.5144 T22: 0.3356 REMARK 3 T33: 0.4857 T12: -0.0406 REMARK 3 T13: -0.0000 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 2.8737 L22: 3.5043 REMARK 3 L33: 4.3547 L12: 2.0024 REMARK 3 L13: -0.6889 L23: 1.0529 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: 0.1366 S13: 0.1307 REMARK 3 S21: 0.3461 S22: -0.0577 S23: 0.2801 REMARK 3 S31: -0.0545 S32: -0.2052 S33: 0.0903 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3242 -7.6533 -2.0240 REMARK 3 T TENSOR REMARK 3 T11: 0.4698 T22: 0.2670 REMARK 3 T33: 0.3817 T12: -0.0340 REMARK 3 T13: -0.0851 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 5.5115 L22: 9.4698 REMARK 3 L33: 6.9876 L12: 0.0048 REMARK 3 L13: -3.4670 L23: 3.1459 REMARK 3 S TENSOR REMARK 3 S11: 0.1911 S12: 0.2942 S13: 1.0867 REMARK 3 S21: 0.5125 S22: -0.1270 S23: 0.5489 REMARK 3 S31: -0.3658 S32: -0.0650 S33: -0.2306 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.8171 -23.7471 1.0963 REMARK 3 T TENSOR REMARK 3 T11: 0.5989 T22: 0.5016 REMARK 3 T33: 0.8878 T12: -0.1435 REMARK 3 T13: 0.2104 T23: -0.0728 REMARK 3 L TENSOR REMARK 3 L11: 2.4545 L22: 3.8369 REMARK 3 L33: 3.0111 L12: 1.2484 REMARK 3 L13: -1.3435 L23: -3.5338 REMARK 3 S TENSOR REMARK 3 S11: 0.2553 S12: 0.5150 S13: -0.3198 REMARK 3 S21: 0.4584 S22: 0.0189 S23: 1.3401 REMARK 3 S31: 0.4063 S32: 0.0915 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ONE ROUND OF REFINEMENT USING BUSTER REMARK 3 -TNT REMARK 4 REMARK 4 5G5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1290066933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97962 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PLIATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11381 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 45.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.160 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.69 REMARK 200 R MERGE FOR SHELL (I) : 0.88000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 4FHB AND 3KPB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: WITH 0.14 M BIS-TRIS PH 6.0, 0.28 M REMARK 280 (NH4)2SO4 AND 19% PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.60000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.20000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 98.40000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 164.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.80000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.60000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 131.20000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 164.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 98.40000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 32.80000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 32.80000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2016 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2014 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 357 REMARK 465 LYS A 358 REMARK 465 ARG A 359 REMARK 465 GLY A 360 REMARK 465 SER A 361 REMARK 465 SER A 362 REMARK 465 LEU A 363 REMARK 465 GLU A 364 REMARK 465 TRP A 365 REMARK 465 SER A 366 REMARK 465 HIS A 367 REMARK 465 PRO A 368 REMARK 465 GLN A 369 REMARK 465 PHE A 370 REMARK 465 GLU A 371 REMARK 465 LYS A 372 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 351 -174.78 -64.71 REMARK 500 GLU A 352 -2.60 61.70 REMARK 500 ASN B 30 79.37 -151.11 REMARK 500 VAL B 48 -63.23 -100.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1357 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1358 REMARK 999 REMARK 999 SEQUENCE REMARK 999 D236-S362 DBREF 5G5R A 236 362 UNP O29915 O29915_ARCFU 236 362 DBREF 5G5R B 1 123 PDB 5G5R 5G5R 1 123 SEQADV 5G5R MET A 235 UNP O29915 EXPRESSION TAG SEQADV 5G5R LEU A 363 UNP O29915 EXPRESSION TAG SEQADV 5G5R GLU A 364 UNP O29915 EXPRESSION TAG SEQADV 5G5R TRP A 365 UNP O29915 EXPRESSION TAG SEQADV 5G5R SER A 366 UNP O29915 EXPRESSION TAG SEQADV 5G5R HIS A 367 UNP O29915 EXPRESSION TAG SEQADV 5G5R PRO A 368 UNP O29915 EXPRESSION TAG SEQADV 5G5R GLN A 369 UNP O29915 EXPRESSION TAG SEQADV 5G5R PHE A 370 UNP O29915 EXPRESSION TAG SEQADV 5G5R GLU A 371 UNP O29915 EXPRESSION TAG SEQADV 5G5R LYS A 372 UNP O29915 EXPRESSION TAG SEQRES 1 A 138 MET ASP VAL MET ASN THR GLU VAL VAL THR VAL THR PRO SEQRES 2 A 138 GLU MET THR VAL SER GLU VAL ILE ASP LEU ILE LEU LYS SEQRES 3 A 138 THR LYS HIS LEU GLY PHE PRO VAL VAL GLU GLY GLU ARG SEQRES 4 A 138 LEU VAL GLY ILE ILE THR LEU HIS ASP ILE ILE GLY VAL SEQRES 5 A 138 GLU PRO GLU GLU ARG VAL GLY ASN ILE MET SER ARG GLU SEQRES 6 A 138 VAL VAL ALA VAL SER PRO ASN GLN SER ALA PHE GLU ALA SEQRES 7 A 138 PHE LYS ILE MET SER GLU MET GLY ILE GLY ARG LEU PRO SEQRES 8 A 138 VAL VAL GLU HIS GLY ARG VAL VAL GLY ILE VAL SER ARG SEQRES 9 A 138 SER ASP LEU MET ARG ILE LYS GLU ILE LEU GLU ALA LEU SEQRES 10 A 138 GLU VAL MET GLY TRP ARG LYS ARG GLY SER SER LEU GLU SEQRES 11 A 138 TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 123 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 123 SER GLY PHE ASN ASN ASN ALA MET GLY TRP TYR ARG GLN SEQRES 4 B 123 ALA PRO GLY LYS GLN ARG GLU LEU VAL ALA ALA ILE THR SEQRES 5 B 123 SER PHE GLY SER THR ASN TYR ALA ASP SER VAL LYS GLY SEQRES 6 B 123 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 B 123 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 B 123 VAL TYR TYR CYS THR ALA GLY TRP GLY ALA THR PRO ARG SEQRES 9 B 123 SER TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 10 B 123 HIS HIS HIS HIS HIS HIS HET SO4 A1357 5 HET SO4 A1358 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *31(H2 O) HELIX 1 1 THR A 250 LYS A 262 1 13 HELIX 2 2 HIS A 281 ILE A 284 5 4 HELIX 3 3 VAL A 292 ILE A 295 5 4 HELIX 4 4 SER A 308 GLY A 320 1 13 HELIX 5 5 ARG A 338 LEU A 351 1 14 HELIX 6 6 ASP B 61 VAL B 63 5 3 HELIX 7 7 LYS B 86 THR B 90 5 5 SHEET 1 AA 2 GLY A 265 GLU A 270 0 SHEET 2 AA 2 ARG A 273 THR A 279 -1 O ARG A 273 N GLU A 270 SHEET 1 AB 2 ARG A 323 GLU A 328 0 SHEET 2 AB 2 ARG A 331 SER A 337 -1 O ARG A 331 N GLU A 328 SHEET 1 BA 4 GLN B 3 SER B 7 0 SHEET 2 BA 4 LEU B 18 SER B 25 -1 O SER B 21 N SER B 7 SHEET 3 BA 4 THR B 77 MET B 82 -1 O VAL B 78 N CYS B 22 SHEET 4 BA 4 PHE B 67 ASP B 72 -1 O THR B 68 N GLN B 81 SHEET 1 BB 4 LEU B 11 VAL B 12 0 SHEET 2 BB 4 THR B 111 VAL B 115 1 O THR B 114 N VAL B 12 SHEET 3 BB 4 ALA B 91 GLY B 98 -1 O ALA B 91 N VAL B 113 SHEET 4 BB 4 TYR B 106 TRP B 107 -1 O TYR B 106 N ALA B 97 SHEET 1 BC 6 LEU B 11 VAL B 12 0 SHEET 2 BC 6 THR B 111 VAL B 115 1 O THR B 114 N VAL B 12 SHEET 3 BC 6 ALA B 91 GLY B 98 -1 O ALA B 91 N VAL B 113 SHEET 4 BC 6 ALA B 33 GLN B 39 -1 O ALA B 33 N GLY B 98 SHEET 5 BC 6 ARG B 45 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 BC 6 THR B 57 TYR B 59 -1 O ASN B 58 N ALA B 50 SHEET 1 BD 2 TYR B 106 TRP B 107 0 SHEET 2 BD 2 ALA B 91 GLY B 98 -1 O ALA B 97 N TYR B 106 SSBOND 1 CYS B 22 CYS B 95 1555 1555 2.03 SITE 1 AC1 5 HIS A 263 LEU A 264 GLY A 322 ARG A 323 SITE 2 AC1 5 ARG A 343 SITE 1 AC2 6 ARG A 273 ARG A 331 HOH A2017 ASP B 61 SITE 2 AC2 6 HIS B 119 HIS B 120 CRYST1 68.440 68.440 196.800 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014611 0.008436 0.000000 0.00000 SCALE2 0.000000 0.016872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005081 0.00000