HEADER DE NOVO PROTEIN 01-DEC-15 5GAJ TITLE SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED PLOOP2X3_50 FOLD PROTEIN, TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET OR258 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DE NOVO DESIGNED PROTEIN OR258; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, PSI-BIOLOGY, DE NOVO KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,J.CASTELLLANOS,R.KOGA,N.KOGA,R.XIAO,K.PEDERSON,H.JANJUA, AUTHOR 2 E.KOHAN,T.B.ACTON,G.KORNHABER,J.EVERETT,D.BAKER,G.T.MONTELIONE, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 15-MAY-24 5GAJ 1 REMARK REVDAT 2 14-JUN-23 5GAJ 1 COMPND REMARK REVDAT 1 06-JAN-16 5GAJ 0 JRNL AUTH G.LIU,G.T.MONTELIONE JRNL TITL SOLUTION NMR STRUCTURE DE NOVO DESIGNED PLOOP2X3_50 FOLD JRNL TITL 2 PROTEIN, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) JRNL TITL 3 TARGET OR258 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GAJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1001300020. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 115 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.89 MM [U-13C; U-15N] OR258, 5 REMARK 210 MM DTT, 100 MM SODIUM CHLORIDE, REMARK 210 10 MM TRIS-HCL, 0.02 % SODIUM REMARK 210 AZIDE, 90% H2O/10% D2O; 0.89 MM REMARK 210 [5%-13C; U-15N] OR258, 5 MM DTT, REMARK 210 100 MM SODIUM CHLORIDE, 10 MM REMARK 210 TRIS-HCL, 0.02 % SODIUM AZIDE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D SIMUTALNEOUS 13C-AROMATIC, REMARK 210 13C-ALIPHATIC, 15N EDITED 1H-1H REMARK 210 NOESY; 3D 1H-13C NOESY AROMATIC; REMARK 210 3D HNCACB; 3D CCH-TOCSY; 2D 1H- REMARK 210 15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC METHYL REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, AUTOASSIGN, XEASY REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 111 126.33 -175.86 REMARK 500 2 SER A 25 -72.57 -75.21 REMARK 500 3 ASP A 86 -165.89 -179.37 REMARK 500 3 ASN A 111 148.24 168.71 REMARK 500 3 HIS A 129 19.62 58.67 REMARK 500 3 HIS A 131 42.92 -87.16 REMARK 500 4 SER A 25 -79.40 -73.12 REMARK 500 4 ASN A 111 -168.76 -178.08 REMARK 500 5 ALA A 61 -161.65 -116.70 REMARK 500 5 ASP A 86 -175.36 179.36 REMARK 500 5 ASN A 111 108.79 -175.05 REMARK 500 5 HIS A 129 -40.37 74.74 REMARK 500 5 HIS A 130 109.68 -49.91 REMARK 500 6 ASP A 88 155.00 177.71 REMARK 500 7 ASN A 111 177.05 170.13 REMARK 500 8 ASP A 26 113.20 -161.41 REMARK 500 8 ASP A 86 164.85 179.56 REMARK 500 8 ASN A 111 138.36 98.32 REMARK 500 8 HIS A 132 93.80 -60.11 REMARK 500 9 ASP A 86 147.40 -179.22 REMARK 500 9 ASN A 111 147.41 167.45 REMARK 500 10 SER A 25 -75.77 -95.67 REMARK 500 10 ALA A 61 160.90 74.99 REMARK 500 10 HIS A 132 -77.66 -90.21 REMARK 500 10 HIS A 133 159.01 176.28 REMARK 500 11 ASN A 111 158.27 161.24 REMARK 500 11 HIS A 130 96.66 -69.10 REMARK 500 11 HIS A 131 91.28 -55.95 REMARK 500 12 ASN A 111 176.89 163.96 REMARK 500 12 HIS A 129 22.35 44.64 REMARK 500 13 ASP A 26 115.66 -171.27 REMARK 500 13 ASP A 86 172.84 176.37 REMARK 500 13 ASP A 88 44.01 -90.32 REMARK 500 13 ASN A 111 137.08 88.89 REMARK 500 13 HIS A 129 100.27 -59.69 REMARK 500 14 SER A 25 -72.93 -90.44 REMARK 500 14 ASP A 86 -168.77 -169.89 REMARK 500 14 ASN A 111 144.62 93.85 REMARK 500 14 HIS A 129 42.48 -103.05 REMARK 500 15 ASN A 111 112.62 177.08 REMARK 500 15 HIS A 129 -41.20 73.76 REMARK 500 15 HIS A 132 2.83 -165.11 REMARK 500 16 ASP A 26 119.50 -169.09 REMARK 500 16 ASP A 86 -165.47 -164.43 REMARK 500 16 ASN A 111 -172.73 170.88 REMARK 500 17 THR A 109 127.60 -170.14 REMARK 500 17 HIS A 129 -49.86 71.04 REMARK 500 18 ASN A 111 125.31 -175.27 REMARK 500 18 GLU A 128 22.44 -79.34 REMARK 500 19 SER A 25 -74.92 -79.47 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30000 RELATED DB: BMRB REMARK 900 RELATED ID: NESG-OR258 RELATED DB: TARGETTRACK DBREF 5GAJ A 1 134 PDB 5GAJ 5GAJ 1 134 SEQRES 1 A 134 MET GLY THR VAL VAL ILE VAL VAL SER ARG ASP GLU ARG SEQRES 2 A 134 ILE LEU GLU GLU LEU LEU GLU VAL VAL LEU LYS SER ASP SEQRES 3 A 134 PRO ASN VAL LYS THR VAL ARG THR ASP ASP LYS GLU LYS SEQRES 4 A 134 VAL LYS GLU GLU ILE GLU LYS ALA ARG LYS GLN GLY ARG SEQRES 5 A 134 PRO ILE VAL ILE PHE ILE ARG GLY ALA THR GLU GLU VAL SEQRES 6 A 134 VAL ARG ASP ILE VAL GLU TYR ALA GLN LYS GLU GLY LEU SEQRES 7 A 134 ARG VAL LEU VAL ILE MET VAL ASP GLN ASP GLN GLU GLU SEQRES 8 A 134 LEU GLU ARG ILE TYR GLU GLN LEU LYS LYS ASP GLY VAL SEQRES 9 A 134 ASP VAL ARG VAL THR ASP ASN GLU ASP GLU ALA LYS LYS SEQRES 10 A 134 ARG LEU LYS GLU LEU LEU GLU LYS VAL LEU GLU HIS HIS SEQRES 11 A 134 HIS HIS HIS HIS HELIX 1 AA1 ASP A 11 ASP A 26 1 16 HELIX 2 AA2 ASP A 36 GLY A 51 1 16 HELIX 3 AA3 THR A 62 GLU A 76 1 15 HELIX 4 AA4 ASP A 88 GLY A 103 1 16 HELIX 5 AA5 ASN A 111 HIS A 129 1 19 SHEET 1 AA1 5 LYS A 30 VAL A 32 0 SHEET 2 AA1 5 PRO A 53 ARG A 59 1 O VAL A 55 N VAL A 32 SHEET 3 AA1 5 THR A 3 SER A 9 1 N VAL A 5 O ILE A 56 SHEET 4 AA1 5 ARG A 79 VAL A 85 1 O ILE A 83 N VAL A 8 SHEET 5 AA1 5 ASP A 105 THR A 109 1 O ASP A 105 N VAL A 82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.001000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.001000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001000 0.00000 MODEL 1