HEADER TRANSFERASE, SUGAR BINDING PROTEIN/SUBST16-JUN-16 5GGI TITLE CRYSTAL STRUCTURE OF HUMAN PROTEIN O-MANNOSE BETA-1,2-N- TITLE 2 ACETYLGLUCOSAMINYLTRANSFERASE IN COMPLEX WITH MN, UDP AND MANNOSYL- TITLE 3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN O-LINKED-MANNOSE BETA-1,2-N- COMPND 3 ACETYLGLUCOSAMINYLTRANSFERASE 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 92-660; COMPND 6 SYNONYM: POMGNT1,UDP-GLCNAC:ALPHA-D-MANNOSIDE BETA-1,2-N- COMPND 7 ACETYLGLUCOSAMINYLTRANSFERASE I.2,GNT I.2; COMPND 8 EC: 2.4.1.-; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: MANNOSYL-PEPTIDE; COMPND 12 CHAIN: F, G; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POMGNT1, MGAT1.2, UNQ746/PRO1475; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK-293T; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS GLYCOSYLTRANSFEREASE, O-MANNOSYLATION, ALPHA-DYSTROGLYCAN, KEYWDS 2 TRANSFERASE, SUGAR BINDING PROTEIN-SUBSTRATE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.KUWABARA,T.SENDA,R.KATO REVDAT 6 20-MAR-24 5GGI 1 SOURCE REVDAT 5 08-NOV-23 5GGI 1 HETSYN REVDAT 4 29-JUL-20 5GGI 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 26-FEB-20 5GGI 1 JRNL REMARK REVDAT 2 31-AUG-16 5GGI 1 JRNL REVDAT 1 10-AUG-16 5GGI 0 JRNL AUTH N.KUWABARA,H.MANYA,T.YAMADA,H.TATENO,M.KANAGAWA,K.KOBAYASHI, JRNL AUTH 2 K.AKASAKA-MANYA,Y.HIROSE,M.MIZUNO,M.IKEGUCHI,T.TODA, JRNL AUTH 3 J.HIRABAYASHI,T.SENDA,T.ENDO,R.KATO JRNL TITL CARBOHYDRATE-BINDING DOMAIN OF THE POMGNT1 STEM REGION JRNL TITL 2 MODULATES O-MANNOSYLATION SITES OF ALPHA-DYSTROGLYCAN JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 9280 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27493216 JRNL DOI 10.1073/PNAS.1525545113 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2341 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3790 - 6.6792 1.00 2791 170 0.2056 0.2303 REMARK 3 2 6.6792 - 5.3039 1.00 2699 131 0.1872 0.1840 REMARK 3 3 5.3039 - 4.6342 1.00 2678 125 0.1662 0.1881 REMARK 3 4 4.6342 - 4.2108 1.00 2627 135 0.1591 0.1963 REMARK 3 5 4.2108 - 3.9091 1.00 2644 141 0.1721 0.2102 REMARK 3 6 3.9091 - 3.6788 1.00 2595 148 0.1777 0.2306 REMARK 3 7 3.6788 - 3.4946 1.00 2589 148 0.1891 0.2493 REMARK 3 8 3.4946 - 3.3425 1.00 2589 140 0.2071 0.2679 REMARK 3 9 3.3425 - 3.2139 1.00 2609 131 0.2222 0.2705 REMARK 3 10 3.2139 - 3.1030 1.00 2574 138 0.2175 0.2762 REMARK 3 11 3.1030 - 3.0060 1.00 2613 125 0.2196 0.2572 REMARK 3 12 3.0060 - 2.9201 1.00 2595 128 0.2224 0.2793 REMARK 3 13 2.9201 - 2.8432 1.00 2581 136 0.2212 0.2736 REMARK 3 14 2.8432 - 2.7739 1.00 2559 153 0.2454 0.3216 REMARK 3 15 2.7739 - 2.7108 1.00 2558 123 0.2740 0.3440 REMARK 3 16 2.7108 - 2.6531 1.00 2603 141 0.3119 0.3880 REMARK 3 17 2.6531 - 2.6001 1.00 2583 128 0.3654 0.4242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 8085 REMARK 3 ANGLE : 0.784 11024 REMARK 3 CHIRALITY : 0.048 1181 REMARK 3 PLANARITY : 0.006 1416 REMARK 3 DIHEDRAL : 16.122 4867 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0011 145.6449 4.4231 REMARK 3 T TENSOR REMARK 3 T11: 0.5946 T22: 1.1699 REMARK 3 T33: 0.7717 T12: 0.2520 REMARK 3 T13: 0.1038 T23: 0.2834 REMARK 3 L TENSOR REMARK 3 L11: 3.5646 L22: 6.8751 REMARK 3 L33: 5.0043 L12: -0.1023 REMARK 3 L13: -0.3787 L23: 0.3690 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: -0.1286 S13: -0.7112 REMARK 3 S21: -0.0403 S22: -0.5941 S23: -0.6929 REMARK 3 S31: 0.6565 S32: 1.5787 S33: 0.6128 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 551 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3332 152.3258 17.5874 REMARK 3 T TENSOR REMARK 3 T11: 0.2351 T22: 0.2871 REMARK 3 T33: 0.2895 T12: 0.0043 REMARK 3 T13: -0.0548 T23: 0.0412 REMARK 3 L TENSOR REMARK 3 L11: 1.6042 L22: 2.1547 REMARK 3 L33: 2.5762 L12: 0.4420 REMARK 3 L13: -0.6554 L23: -0.7320 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: -0.1466 S13: -0.1498 REMARK 3 S21: 0.0550 S22: -0.1046 S23: -0.0909 REMARK 3 S31: -0.0284 S32: 0.1692 S33: 0.0969 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 552 THROUGH 647 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7240 146.8302 42.9715 REMARK 3 T TENSOR REMARK 3 T11: 0.2970 T22: 0.3382 REMARK 3 T33: 0.2823 T12: 0.0133 REMARK 3 T13: 0.0282 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 4.8813 L22: 4.2220 REMARK 3 L33: 5.7776 L12: 1.0847 REMARK 3 L13: -1.5964 L23: 0.0450 REMARK 3 S TENSOR REMARK 3 S11: 0.1234 S12: -0.3740 S13: 0.1486 REMARK 3 S21: 0.4382 S22: -0.1797 S23: -0.0478 REMARK 3 S31: -0.1020 S32: 0.2020 S33: 0.0491 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 259 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8597 126.9359 27.4621 REMARK 3 T TENSOR REMARK 3 T11: 0.3342 T22: 0.3721 REMARK 3 T33: 0.3529 T12: 0.0100 REMARK 3 T13: 0.0080 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 4.5781 L22: 3.8526 REMARK 3 L33: 4.1534 L12: -1.7113 REMARK 3 L13: 2.0423 L23: -0.8622 REMARK 3 S TENSOR REMARK 3 S11: 0.2029 S12: 0.3561 S13: -0.2772 REMARK 3 S21: -0.2790 S22: -0.0481 S23: 0.3556 REMARK 3 S31: 0.4003 S32: 0.2584 S33: -0.1013 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 260 THROUGH 647 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.1773 140.0388 64.1744 REMARK 3 T TENSOR REMARK 3 T11: 0.3030 T22: 0.3605 REMARK 3 T33: 0.3101 T12: 0.0432 REMARK 3 T13: -0.0168 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.8988 L22: 3.1554 REMARK 3 L33: 2.0966 L12: -0.2363 REMARK 3 L13: 0.0433 L23: 1.2386 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.0139 S13: 0.0300 REMARK 3 S21: -0.0895 S22: -0.1225 S23: 0.2613 REMARK 3 S31: -0.1290 S32: -0.0139 S33: 0.0923 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7611 145.6110 31.5116 REMARK 3 T TENSOR REMARK 3 T11: 0.8521 T22: 1.0059 REMARK 3 T33: 0.8080 T12: -0.0103 REMARK 3 T13: 0.0987 T23: 0.1716 REMARK 3 L TENSOR REMARK 3 L11: 6.9356 L22: 8.0356 REMARK 3 L33: 2.0033 L12: 3.2897 REMARK 3 L13: 2.5608 L23: -0.4046 REMARK 3 S TENSOR REMARK 3 S11: -0.3148 S12: -1.1066 S13: -1.0720 REMARK 3 S21: 0.9447 S22: -0.7104 S23: -1.3108 REMARK 3 S31: -0.0741 S32: 0.6930 S33: 0.9362 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9825 139.5331 61.0359 REMARK 3 T TENSOR REMARK 3 T11: 0.7223 T22: 1.3657 REMARK 3 T33: 1.8283 T12: -0.0985 REMARK 3 T13: -0.2121 T23: 0.3908 REMARK 3 L TENSOR REMARK 3 L11: 4.1922 L22: 7.1950 REMARK 3 L33: 6.9917 L12: 5.4941 REMARK 3 L13: -5.4169 L23: -7.0871 REMARK 3 S TENSOR REMARK 3 S11: -0.1048 S12: -0.2973 S13: 0.0045 REMARK 3 S21: -0.3469 S22: -0.2781 S23: -0.8056 REMARK 3 S31: -0.0045 S32: 1.1515 S33: 0.3423 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GGI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1300000737. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6-6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46907 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 46.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.20 REMARK 200 R MERGE (I) : 0.33800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.80 REMARK 200 R MERGE FOR SHELL (I) : 1.08500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GGG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAKPO4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.26950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.43250 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.26950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.43250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 92 REMARK 465 SER A 93 REMARK 465 GLY A 94 REMARK 465 PRO A 95 REMARK 465 ARG A 96 REMARK 465 ARG A 97 REMARK 465 VAL A 98 REMARK 465 LEU A 99 REMARK 465 ASP A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 VAL A 103 REMARK 465 TYR A 104 REMARK 465 SER A 105 REMARK 465 SER A 106 REMARK 465 ARG A 107 REMARK 465 SER A 108 REMARK 465 LYS A 109 REMARK 465 VAL A 110 REMARK 465 TYR A 111 REMARK 465 VAL A 112 REMARK 465 ALA A 113 REMARK 465 VAL A 114 REMARK 465 ASP A 115 REMARK 465 GLY A 116 REMARK 465 THR A 117 REMARK 465 THR A 118 REMARK 465 VAL A 119 REMARK 465 LEU A 120 REMARK 465 GLU A 121 REMARK 465 ASP A 122 REMARK 465 GLU A 123 REMARK 465 ALA A 124 REMARK 465 ARG A 125 REMARK 465 GLU A 126 REMARK 465 GLN A 127 REMARK 465 GLY A 128 REMARK 465 ARG A 129 REMARK 465 GLY A 130 REMARK 465 ILE A 131 REMARK 465 HIS A 132 REMARK 465 VAL A 133 REMARK 465 ILE A 134 REMARK 465 VAL A 135 REMARK 465 LEU A 136 REMARK 465 ASN A 137 REMARK 465 GLN A 138 REMARK 465 ALA A 139 REMARK 465 THR A 140 REMARK 465 GLY A 141 REMARK 465 HIS A 142 REMARK 465 VAL A 143 REMARK 465 MET A 144 REMARK 465 ALA A 145 REMARK 465 LYS A 146 REMARK 465 ARG A 147 REMARK 465 VAL A 148 REMARK 465 PHE A 149 REMARK 465 ASP A 150 REMARK 465 THR A 151 REMARK 465 TYR A 152 REMARK 465 SER A 153 REMARK 465 PRO A 154 REMARK 465 HIS A 155 REMARK 465 GLU A 156 REMARK 465 ASP A 157 REMARK 465 GLU A 158 REMARK 465 ALA A 159 REMARK 465 MET A 160 REMARK 465 VAL A 161 REMARK 465 LEU A 162 REMARK 465 PHE A 163 REMARK 465 LEU A 164 REMARK 465 ASN A 165 REMARK 465 MET A 166 REMARK 465 VAL A 167 REMARK 465 ALA A 168 REMARK 465 PRO A 169 REMARK 465 GLY A 170 REMARK 465 ARG A 171 REMARK 465 VAL A 172 REMARK 465 LEU A 173 REMARK 465 ILE A 174 REMARK 465 CYS A 175 REMARK 465 THR A 176 REMARK 465 VAL A 177 REMARK 465 LYS A 178 REMARK 465 ASP A 179 REMARK 465 GLU A 180 REMARK 465 GLY A 181 REMARK 465 SER A 182 REMARK 465 PHE A 183 REMARK 465 HIS A 184 REMARK 465 LEU A 185 REMARK 465 LYS A 186 REMARK 465 ASP A 187 REMARK 465 THR A 188 REMARK 465 ALA A 189 REMARK 465 LYS A 190 REMARK 465 ALA A 191 REMARK 465 LEU A 192 REMARK 465 LEU A 193 REMARK 465 ARG A 194 REMARK 465 SER A 195 REMARK 465 LEU A 196 REMARK 465 GLY A 197 REMARK 465 SER A 198 REMARK 465 GLN A 199 REMARK 465 ALA A 200 REMARK 465 GLY A 201 REMARK 465 PRO A 202 REMARK 465 ALA A 203 REMARK 465 LEU A 204 REMARK 465 GLY A 205 REMARK 465 TRP A 206 REMARK 465 ARG A 207 REMARK 465 ASP A 208 REMARK 465 THR A 209 REMARK 465 TRP A 210 REMARK 465 ALA A 211 REMARK 465 PHE A 212 REMARK 465 VAL A 213 REMARK 465 GLY A 214 REMARK 465 ARG A 215 REMARK 465 LYS A 216 REMARK 465 GLY A 217 REMARK 465 GLY A 218 REMARK 465 PRO A 219 REMARK 465 VAL A 220 REMARK 465 PHE A 221 REMARK 465 GLY A 222 REMARK 465 GLU A 223 REMARK 465 LYS A 224 REMARK 465 HIS A 225 REMARK 465 SER A 226 REMARK 465 LYS A 227 REMARK 465 SER A 228 REMARK 465 PRO A 229 REMARK 465 ALA A 230 REMARK 465 LEU A 231 REMARK 465 SER A 232 REMARK 465 SER A 233 REMARK 465 TRP A 234 REMARK 465 GLY A 235 REMARK 465 ASP A 236 REMARK 465 PRO A 237 REMARK 465 VAL A 238 REMARK 465 LEU A 239 REMARK 465 LEU A 240 REMARK 465 LYS A 241 REMARK 465 THR A 242 REMARK 465 ASP A 243 REMARK 465 VAL A 244 REMARK 465 PRO A 245 REMARK 465 LEU A 246 REMARK 465 SER A 247 REMARK 465 SER A 248 REMARK 465 ALA A 249 REMARK 465 GLU A 250 REMARK 465 GLU A 251 REMARK 465 ALA A 252 REMARK 465 GLU A 253 REMARK 465 PRO A 648 REMARK 465 LYS A 649 REMARK 465 GLU A 650 REMARK 465 GLU A 651 REMARK 465 GLY A 652 REMARK 465 ALA A 653 REMARK 465 PRO A 654 REMARK 465 GLY A 655 REMARK 465 ALA A 656 REMARK 465 PRO A 657 REMARK 465 GLU A 658 REMARK 465 GLN A 659 REMARK 465 THR A 660 REMARK 465 LEU A 661 REMARK 465 GLU A 662 REMARK 465 LEU A 663 REMARK 465 GLU A 664 REMARK 465 VAL A 665 REMARK 465 LEU A 666 REMARK 465 PHE A 667 REMARK 465 GLN A 668 REMARK 465 GLY A 669 REMARK 465 GLY B 92 REMARK 465 SER B 93 REMARK 465 GLY B 94 REMARK 465 PRO B 95 REMARK 465 ARG B 96 REMARK 465 PRO B 648 REMARK 465 LYS B 649 REMARK 465 GLU B 650 REMARK 465 GLU B 651 REMARK 465 GLY B 652 REMARK 465 ALA B 653 REMARK 465 PRO B 654 REMARK 465 GLY B 655 REMARK 465 ALA B 656 REMARK 465 PRO B 657 REMARK 465 GLU B 658 REMARK 465 GLN B 659 REMARK 465 THR B 660 REMARK 465 LEU B 661 REMARK 465 GLU B 662 REMARK 465 LEU B 663 REMARK 465 GLU B 664 REMARK 465 VAL B 665 REMARK 465 LEU B 666 REMARK 465 PHE B 667 REMARK 465 GLN B 668 REMARK 465 GLY B 669 REMARK 465 NH2 F 10 REMARK 465 ACE G 0 REMARK 465 VAL G 6 REMARK 465 ALA G 7 REMARK 465 ALA G 8 REMARK 465 PRO G 9 REMARK 465 NH2 G 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 250 CG CD OE1 OE2 REMARK 470 GLU B 251 CG CD OE1 OE2 REMARK 470 LYS B 617 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS B 254 NH2 ARG B 266 2.11 REMARK 500 OD1 ASP B 122 NE2 GLN B 127 2.16 REMARK 500 NZ LYS A 387 OE2 GLU A 414 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 258 89.62 -68.91 REMARK 500 CYS A 281 -79.53 -69.07 REMARK 500 ASP A 296 77.39 52.77 REMARK 500 ASN A 310 70.33 -104.83 REMARK 500 SER A 362 -164.56 66.73 REMARK 500 LYS A 364 -134.29 53.96 REMARK 500 GLU A 435 -40.86 -141.60 REMARK 500 GLU A 461 -52.90 -120.19 REMARK 500 ASP A 569 89.58 -68.92 REMARK 500 ILE A 599 -164.70 -129.06 REMARK 500 HIS B 155 -6.43 68.98 REMARK 500 ASP B 179 -75.84 69.80 REMARK 500 SER B 232 5.58 -69.12 REMARK 500 ALA B 252 -4.24 67.00 REMARK 500 ASN B 310 69.39 -115.92 REMARK 500 TYR B 340 47.43 -103.04 REMARK 500 SER B 362 -141.36 55.60 REMARK 500 ILE B 363 129.27 -170.06 REMARK 500 LYS B 364 -130.17 62.69 REMARK 500 GLU B 435 -82.21 -150.59 REMARK 500 GLU B 444 55.79 -93.26 REMARK 500 GLU B 461 -61.85 -123.19 REMARK 500 MET B 581 89.53 -150.06 REMARK 500 ILE B 599 -161.10 -128.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 850 DISTANCE = 8.63 ANGSTROMS REMARK 525 HOH A 851 DISTANCE = 9.13 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 395 OD2 REMARK 620 2 HIS A 500 NE2 79.0 REMARK 620 3 UDP A 701 O2A 103.7 155.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 395 OD2 REMARK 620 2 HIS B 500 NE2 70.2 REMARK 620 3 UDP B 701 O2A 107.0 123.4 REMARK 620 4 UDP B 701 O2B 153.7 90.5 68.2 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GGF RELATED DB: PDB REMARK 900 RELATED ID: 5GGG RELATED DB: PDB REMARK 900 RELATED ID: 5GGJ RELATED DB: PDB REMARK 900 RELATED ID: 5GGK RELATED DB: PDB REMARK 900 RELATED ID: 5GGL RELATED DB: PDB REMARK 900 RELATED ID: 5GGN RELATED DB: PDB REMARK 900 RELATED ID: 5GGO RELATED DB: PDB REMARK 900 RELATED ID: 5GGP RELATED DB: PDB DBREF 5GGI A 92 660 UNP Q8WZA1 PMGT1_HUMAN 92 660 DBREF 5GGI B 92 660 UNP Q8WZA1 PMGT1_HUMAN 92 660 DBREF 5GGI F 0 10 PDB 5GGI 5GGI 0 10 DBREF 5GGI G 0 10 PDB 5GGI 5GGI 0 10 SEQADV 5GGI VAL A 623 UNP Q8WZA1 MET 623 VARIANT SEQADV 5GGI LEU A 661 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLU A 662 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI LEU A 663 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLU A 664 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI VAL A 665 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI LEU A 666 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI PHE A 667 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLN A 668 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLY A 669 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI VAL B 623 UNP Q8WZA1 MET 623 VARIANT SEQADV 5GGI LEU B 661 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLU B 662 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI LEU B 663 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLU B 664 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI VAL B 665 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI LEU B 666 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI PHE B 667 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLN B 668 UNP Q8WZA1 EXPRESSION TAG SEQADV 5GGI GLY B 669 UNP Q8WZA1 EXPRESSION TAG SEQRES 1 A 578 GLY SER GLY PRO ARG ARG VAL LEU ASP VAL GLU VAL TYR SEQRES 2 A 578 SER SER ARG SER LYS VAL TYR VAL ALA VAL ASP GLY THR SEQRES 3 A 578 THR VAL LEU GLU ASP GLU ALA ARG GLU GLN GLY ARG GLY SEQRES 4 A 578 ILE HIS VAL ILE VAL LEU ASN GLN ALA THR GLY HIS VAL SEQRES 5 A 578 MET ALA LYS ARG VAL PHE ASP THR TYR SER PRO HIS GLU SEQRES 6 A 578 ASP GLU ALA MET VAL LEU PHE LEU ASN MET VAL ALA PRO SEQRES 7 A 578 GLY ARG VAL LEU ILE CYS THR VAL LYS ASP GLU GLY SER SEQRES 8 A 578 PHE HIS LEU LYS ASP THR ALA LYS ALA LEU LEU ARG SER SEQRES 9 A 578 LEU GLY SER GLN ALA GLY PRO ALA LEU GLY TRP ARG ASP SEQRES 10 A 578 THR TRP ALA PHE VAL GLY ARG LYS GLY GLY PRO VAL PHE SEQRES 11 A 578 GLY GLU LYS HIS SER LYS SER PRO ALA LEU SER SER TRP SEQRES 12 A 578 GLY ASP PRO VAL LEU LEU LYS THR ASP VAL PRO LEU SER SEQRES 13 A 578 SER ALA GLU GLU ALA GLU CYS HIS TRP ALA ASP THR GLU SEQRES 14 A 578 LEU ASN ARG ARG ARG ARG ARG PHE CYS SER LYS VAL GLU SEQRES 15 A 578 GLY TYR GLY SER VAL CYS SER CYS LYS ASP PRO THR PRO SEQRES 16 A 578 ILE GLU PHE SER PRO ASP PRO LEU PRO ASP ASN LYS VAL SEQRES 17 A 578 LEU ASN VAL PRO VAL ALA VAL ILE ALA GLY ASN ARG PRO SEQRES 18 A 578 ASN TYR LEU TYR ARG MET LEU ARG SER LEU LEU SER ALA SEQRES 19 A 578 GLN GLY VAL SER PRO GLN MET ILE THR VAL PHE ILE ASP SEQRES 20 A 578 GLY TYR TYR GLU GLU PRO MET ASP VAL VAL ALA LEU PHE SEQRES 21 A 578 GLY LEU ARG GLY ILE GLN HIS THR PRO ILE SER ILE LYS SEQRES 22 A 578 ASN ALA ARG VAL SER GLN HIS TYR LYS ALA SER LEU THR SEQRES 23 A 578 ALA THR PHE ASN LEU PHE PRO GLU ALA LYS PHE ALA VAL SEQRES 24 A 578 VAL LEU GLU GLU ASP LEU ASP ILE ALA VAL ASP PHE PHE SEQRES 25 A 578 SER PHE LEU SER GLN SER ILE HIS LEU LEU GLU GLU ASP SEQRES 26 A 578 ASP SER LEU TYR CYS ILE SER ALA TRP ASN ASP GLN GLY SEQRES 27 A 578 TYR GLU HIS THR ALA GLU ASP PRO ALA LEU LEU TYR ARG SEQRES 28 A 578 VAL GLU THR MET PRO GLY LEU GLY TRP VAL LEU ARG ARG SEQRES 29 A 578 SER LEU TYR LYS GLU GLU LEU GLU PRO LYS TRP PRO THR SEQRES 30 A 578 PRO GLU LYS LEU TRP ASP TRP ASP MET TRP MET ARG MET SEQRES 31 A 578 PRO GLU GLN ARG ARG GLY ARG GLU CYS ILE ILE PRO ASP SEQRES 32 A 578 VAL SER ARG SER TYR HIS PHE GLY ILE VAL GLY LEU ASN SEQRES 33 A 578 MET ASN GLY TYR PHE HIS GLU ALA TYR PHE LYS LYS HIS SEQRES 34 A 578 LYS PHE ASN THR VAL PRO GLY VAL GLN LEU ARG ASN VAL SEQRES 35 A 578 ASP SER LEU LYS LYS GLU ALA TYR GLU VAL GLU VAL HIS SEQRES 36 A 578 ARG LEU LEU SER GLU ALA GLU VAL LEU ASP HIS SER LYS SEQRES 37 A 578 ASN PRO CYS GLU ASP SER PHE LEU PRO ASP THR GLU GLY SEQRES 38 A 578 HIS THR TYR VAL ALA PHE ILE ARG MET GLU LYS ASP ASP SEQRES 39 A 578 ASP PHE THR THR TRP THR GLN LEU ALA LYS CYS LEU HIS SEQRES 40 A 578 ILE TRP ASP LEU ASP VAL ARG GLY ASN HIS ARG GLY LEU SEQRES 41 A 578 TRP ARG LEU PHE ARG LYS LYS ASN HIS PHE LEU VAL VAL SEQRES 42 A 578 GLY VAL PRO ALA SER PRO TYR SER VAL LYS LYS PRO PRO SEQRES 43 A 578 SER VAL THR PRO ILE PHE LEU GLU PRO PRO PRO LYS GLU SEQRES 44 A 578 GLU GLY ALA PRO GLY ALA PRO GLU GLN THR LEU GLU LEU SEQRES 45 A 578 GLU VAL LEU PHE GLN GLY SEQRES 1 B 578 GLY SER GLY PRO ARG ARG VAL LEU ASP VAL GLU VAL TYR SEQRES 2 B 578 SER SER ARG SER LYS VAL TYR VAL ALA VAL ASP GLY THR SEQRES 3 B 578 THR VAL LEU GLU ASP GLU ALA ARG GLU GLN GLY ARG GLY SEQRES 4 B 578 ILE HIS VAL ILE VAL LEU ASN GLN ALA THR GLY HIS VAL SEQRES 5 B 578 MET ALA LYS ARG VAL PHE ASP THR TYR SER PRO HIS GLU SEQRES 6 B 578 ASP GLU ALA MET VAL LEU PHE LEU ASN MET VAL ALA PRO SEQRES 7 B 578 GLY ARG VAL LEU ILE CYS THR VAL LYS ASP GLU GLY SER SEQRES 8 B 578 PHE HIS LEU LYS ASP THR ALA LYS ALA LEU LEU ARG SER SEQRES 9 B 578 LEU GLY SER GLN ALA GLY PRO ALA LEU GLY TRP ARG ASP SEQRES 10 B 578 THR TRP ALA PHE VAL GLY ARG LYS GLY GLY PRO VAL PHE SEQRES 11 B 578 GLY GLU LYS HIS SER LYS SER PRO ALA LEU SER SER TRP SEQRES 12 B 578 GLY ASP PRO VAL LEU LEU LYS THR ASP VAL PRO LEU SER SEQRES 13 B 578 SER ALA GLU GLU ALA GLU CYS HIS TRP ALA ASP THR GLU SEQRES 14 B 578 LEU ASN ARG ARG ARG ARG ARG PHE CYS SER LYS VAL GLU SEQRES 15 B 578 GLY TYR GLY SER VAL CYS SER CYS LYS ASP PRO THR PRO SEQRES 16 B 578 ILE GLU PHE SER PRO ASP PRO LEU PRO ASP ASN LYS VAL SEQRES 17 B 578 LEU ASN VAL PRO VAL ALA VAL ILE ALA GLY ASN ARG PRO SEQRES 18 B 578 ASN TYR LEU TYR ARG MET LEU ARG SER LEU LEU SER ALA SEQRES 19 B 578 GLN GLY VAL SER PRO GLN MET ILE THR VAL PHE ILE ASP SEQRES 20 B 578 GLY TYR TYR GLU GLU PRO MET ASP VAL VAL ALA LEU PHE SEQRES 21 B 578 GLY LEU ARG GLY ILE GLN HIS THR PRO ILE SER ILE LYS SEQRES 22 B 578 ASN ALA ARG VAL SER GLN HIS TYR LYS ALA SER LEU THR SEQRES 23 B 578 ALA THR PHE ASN LEU PHE PRO GLU ALA LYS PHE ALA VAL SEQRES 24 B 578 VAL LEU GLU GLU ASP LEU ASP ILE ALA VAL ASP PHE PHE SEQRES 25 B 578 SER PHE LEU SER GLN SER ILE HIS LEU LEU GLU GLU ASP SEQRES 26 B 578 ASP SER LEU TYR CYS ILE SER ALA TRP ASN ASP GLN GLY SEQRES 27 B 578 TYR GLU HIS THR ALA GLU ASP PRO ALA LEU LEU TYR ARG SEQRES 28 B 578 VAL GLU THR MET PRO GLY LEU GLY TRP VAL LEU ARG ARG SEQRES 29 B 578 SER LEU TYR LYS GLU GLU LEU GLU PRO LYS TRP PRO THR SEQRES 30 B 578 PRO GLU LYS LEU TRP ASP TRP ASP MET TRP MET ARG MET SEQRES 31 B 578 PRO GLU GLN ARG ARG GLY ARG GLU CYS ILE ILE PRO ASP SEQRES 32 B 578 VAL SER ARG SER TYR HIS PHE GLY ILE VAL GLY LEU ASN SEQRES 33 B 578 MET ASN GLY TYR PHE HIS GLU ALA TYR PHE LYS LYS HIS SEQRES 34 B 578 LYS PHE ASN THR VAL PRO GLY VAL GLN LEU ARG ASN VAL SEQRES 35 B 578 ASP SER LEU LYS LYS GLU ALA TYR GLU VAL GLU VAL HIS SEQRES 36 B 578 ARG LEU LEU SER GLU ALA GLU VAL LEU ASP HIS SER LYS SEQRES 37 B 578 ASN PRO CYS GLU ASP SER PHE LEU PRO ASP THR GLU GLY SEQRES 38 B 578 HIS THR TYR VAL ALA PHE ILE ARG MET GLU LYS ASP ASP SEQRES 39 B 578 ASP PHE THR THR TRP THR GLN LEU ALA LYS CYS LEU HIS SEQRES 40 B 578 ILE TRP ASP LEU ASP VAL ARG GLY ASN HIS ARG GLY LEU SEQRES 41 B 578 TRP ARG LEU PHE ARG LYS LYS ASN HIS PHE LEU VAL VAL SEQRES 42 B 578 GLY VAL PRO ALA SER PRO TYR SER VAL LYS LYS PRO PRO SEQRES 43 B 578 SER VAL THR PRO ILE PHE LEU GLU PRO PRO PRO LYS GLU SEQRES 44 B 578 GLU GLY ALA PRO GLY ALA PRO GLU GLN THR LEU GLU LEU SEQRES 45 B 578 GLU VAL LEU PHE GLN GLY SEQRES 1 F 11 ACE ALA ALA PRO THR PRO VAL ALA ALA PRO NH2 SEQRES 1 G 11 ACE ALA ALA PRO THR PRO VAL ALA ALA PRO NH2 HET ACE F 0 3 HET UDP A 701 25 HET MN A 702 1 HET PO4 A 703 5 HET UDP B 701 25 HET MN B 702 1 HET MAN F 101 11 HET MAN G 101 11 HETNAM ACE ACETYL GROUP HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM PO4 PHOSPHATE ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 ACE C2 H4 O FORMUL 5 UDP 2(C9 H14 N2 O12 P2) FORMUL 6 MN 2(MN 2+) FORMUL 7 PO4 O4 P 3- FORMUL 10 MAN 2(C6 H12 O6) FORMUL 12 HOH *101(H2 O) HELIX 1 AA1 THR A 259 SER A 270 1 12 HELIX 2 AA2 TYR A 275 CYS A 279 5 5 HELIX 3 AA3 ARG A 311 LEU A 323 1 13 HELIX 4 AA4 SER A 329 GLN A 331 5 3 HELIX 5 AA5 TYR A 341 GLY A 352 1 12 HELIX 6 AA6 ILE A 363 PHE A 383 1 21 HELIX 7 AA7 ASP A 401 ASP A 416 1 16 HELIX 8 AA8 ARG A 455 GLU A 461 1 7 HELIX 9 AA9 LEU A 462 TRP A 466 5 5 HELIX 10 AB1 ASP A 474 ARG A 480 1 7 HELIX 11 AB2 MET A 481 ARG A 486 1 6 HELIX 12 AB3 ASN A 509 PHE A 517 1 9 HELIX 13 AB4 ASN A 532 LEU A 536 5 5 HELIX 14 AB5 LYS A 537 ALA A 552 1 16 HELIX 15 AB6 GLU A 563 LEU A 567 5 5 HELIX 16 AB7 PHE A 587 HIS A 598 1 12 HELIX 17 AB8 SER A 629 LYS A 635 5 7 HELIX 18 AB9 HIS B 155 MET B 166 1 12 HELIX 19 AC1 LYS B 186 LEU B 196 1 11 HELIX 20 AC2 ALA B 200 LEU B 204 5 5 HELIX 21 AC3 THR B 259 SER B 270 1 12 HELIX 22 AC4 TYR B 275 CYS B 279 5 5 HELIX 23 AC5 ARG B 311 LEU B 323 1 13 HELIX 24 AC6 SER B 329 GLN B 331 5 3 HELIX 25 AC7 TYR B 341 PHE B 351 1 11 HELIX 26 AC8 LYS B 364 PHE B 383 1 20 HELIX 27 AC9 ASP B 401 ASP B 416 1 16 HELIX 28 AD1 ARG B 455 GLU B 461 1 7 HELIX 29 AD2 LEU B 462 TRP B 466 5 5 HELIX 30 AD3 ASP B 474 ARG B 480 1 7 HELIX 31 AD4 MET B 481 ARG B 486 1 6 HELIX 32 AD5 ASN B 509 PHE B 517 1 9 HELIX 33 AD6 ASN B 532 LEU B 536 5 5 HELIX 34 AD7 LYS B 537 ALA B 552 1 16 HELIX 35 AD8 GLU B 563 LEU B 567 5 5 HELIX 36 AD9 PHE B 587 LEU B 597 1 11 HELIX 37 AE1 SER B 629 LYS B 635 5 7 SHEET 1 AA1 8 ARG A 354 GLN A 357 0 SHEET 2 AA1 8 ILE A 333 ILE A 337 1 N VAL A 335 O ILE A 356 SHEET 3 AA1 8 VAL A 304 ALA A 308 1 N VAL A 306 O PHE A 336 SHEET 4 AA1 8 PHE A 388 GLU A 393 1 O VAL A 390 N ALA A 305 SHEET 5 AA1 8 TRP A 451 ARG A 454 -1 O LEU A 453 N ALA A 389 SHEET 6 AA1 8 LEU A 419 SER A 423 -1 N ILE A 422 O VAL A 452 SHEET 7 AA1 8 GLU A 489 PRO A 493 1 O GLU A 489 N TYR A 420 SHEET 8 AA1 8 LEU A 440 VAL A 443 -1 N TYR A 441 O ILE A 492 SHEET 1 AA2 2 LEU A 396 ILE A 398 0 SHEET 2 AA2 2 SER A 498 HIS A 500 -1 O TYR A 499 N ASP A 397 SHEET 1 AA3 4 GLU A 553 VAL A 554 0 SHEET 2 AA3 4 THR A 574 MET A 581 1 O THR A 574 N GLU A 553 SHEET 3 AA3 4 ASN A 619 PRO A 627 1 O VAL A 626 N MET A 581 SHEET 4 AA3 4 LEU A 611 ARG A 616 -1 N LEU A 614 O PHE A 621 SHEET 1 AA4 4 THR B 117 ASP B 122 0 SHEET 2 AA4 4 VAL B 110 VAL B 114 -1 N VAL B 114 O THR B 117 SHEET 3 AA4 4 VAL B 98 SER B 105 -1 N TYR B 104 O TYR B 111 SHEET 4 AA4 4 VAL B 238 PRO B 245 -1 O LEU B 240 N VAL B 103 SHEET 1 AA5 5 VAL B 143 PHE B 149 0 SHEET 2 AA5 5 GLY B 130 LEU B 136 -1 N VAL B 135 O MET B 144 SHEET 3 AA5 5 VAL B 172 LYS B 178 -1 O THR B 176 N HIS B 132 SHEET 4 AA5 5 THR B 209 ARG B 215 -1 O GLY B 214 N LEU B 173 SHEET 5 AA5 5 VAL B 220 SER B 226 -1 O GLY B 222 N VAL B 213 SHEET 1 AA6 8 ARG B 354 HIS B 358 0 SHEET 2 AA6 8 ILE B 333 ASP B 338 1 N VAL B 335 O ILE B 356 SHEET 3 AA6 8 VAL B 304 ALA B 308 1 N VAL B 306 O PHE B 336 SHEET 4 AA6 8 PHE B 388 GLU B 393 1 O VAL B 390 N ALA B 305 SHEET 5 AA6 8 TRP B 451 ARG B 454 -1 O LEU B 453 N ALA B 389 SHEET 6 AA6 8 LEU B 419 SER B 423 -1 N ILE B 422 O VAL B 452 SHEET 7 AA6 8 GLU B 489 PRO B 493 1 O GLU B 489 N TYR B 420 SHEET 8 AA6 8 LEU B 440 VAL B 443 -1 N TYR B 441 O ILE B 492 SHEET 1 AA7 2 LEU B 396 ILE B 398 0 SHEET 2 AA7 2 SER B 498 HIS B 500 -1 O TYR B 499 N ASP B 397 SHEET 1 AA8 5 GLU B 553 VAL B 554 0 SHEET 2 AA8 5 THR B 574 MET B 581 1 O THR B 574 N GLU B 553 SHEET 3 AA8 5 ASN B 619 PRO B 627 1 O VAL B 626 N MET B 581 SHEET 4 AA8 5 LEU B 611 ARG B 616 -1 N LEU B 614 O PHE B 621 SHEET 5 AA8 5 ASN B 607 HIS B 608 -1 N HIS B 608 O LEU B 611 SSBOND 1 CYS A 254 CYS A 281 1555 1555 2.26 SSBOND 2 CYS A 269 CYS A 279 1555 1555 2.03 SSBOND 3 CYS A 421 CYS A 490 1555 1555 2.04 SSBOND 4 CYS A 562 CYS A 596 1555 1555 2.03 SSBOND 5 CYS B 254 CYS B 281 1555 1555 2.02 SSBOND 6 CYS B 269 CYS B 279 1555 1555 2.07 SSBOND 7 CYS B 421 CYS B 490 1555 1555 2.04 SSBOND 8 CYS B 562 CYS B 596 1555 1555 2.03 LINK C ACE F 0 N ALA F 1 1555 1555 1.33 LINK OG1 THR F 4 C1 MAN F 101 1555 1555 1.45 LINK OG1 THR G 4 C1 MAN G 101 1555 1555 1.44 LINK OD2 ASP A 395 MN MN A 702 1555 1555 2.06 LINK NE2 HIS A 500 MN MN A 702 1555 1555 2.37 LINK O2A UDP A 701 MN MN A 702 1555 1555 1.94 LINK OD2 ASP B 395 MN MN B 702 1555 1555 1.94 LINK NE2 HIS B 500 MN MN B 702 1555 1555 2.62 LINK O2A UDP B 701 MN MN B 702 1555 1555 2.11 LINK O2B UDP B 701 MN MN B 702 1555 1555 2.75 CISPEP 1 VAL A 626 PRO A 627 0 -2.60 CISPEP 2 VAL B 626 PRO B 627 0 -1.42 CRYST1 68.162 126.539 172.865 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014671 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005785 0.00000