data_5GGO # _entry.id 5GGO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GGO pdb_00005ggo 10.2210/pdb5ggo/pdb WWPDB D_1300000742 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5GGF PDB . unspecified 5GGG PDB . unspecified 5GGI PDB . unspecified 5GGJ PDB . unspecified 5GGK PDB . unspecified 5GGL PDB . unspecified 5GGN PDB . unspecified 5GGP PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GGO _pdbx_database_status.recvd_initial_deposition_date 2016-06-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuwabara, N.' 1 'Senda, T.' 2 'Kato, R.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first 9280 _citation.page_last 9285 _citation.title 'Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1525545113 _citation.pdbx_database_id_PubMed 27493216 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuwabara, N.' 1 ? primary 'Manya, H.' 2 ? primary 'Yamada, T.' 3 ? primary 'Tateno, H.' 4 ? primary 'Kanagawa, M.' 5 ? primary 'Kobayashi, K.' 6 ? primary 'Akasaka-Manya, K.' 7 ? primary 'Hirose, Y.' 8 ? primary 'Mizuno, M.' 9 ? primary 'Ikeguchi, M.' 10 ? primary 'Toda, T.' 11 ? primary 'Hirabayashi, J.' 12 ? primary 'Senda, T.' 13 ? primary 'Endo, T.' 14 ? primary 'Kato, R.' 15 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5GGO _cell.details ? _cell.formula_units_Z ? _cell.length_a 70.016 _cell.length_a_esd ? _cell.length_b 89.705 _cell.length_b_esd ? _cell.length_c 53.358 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GGO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1' 17623.020 2 2.4.1.- ? 'UNP residues 97-250' ? 2 branched man '2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside' 545.494 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 364 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'POMGnT1,UDP-GlcNAc:alpha-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I.2,GnT I.2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSGSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNM VAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDVPL SSAE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSGSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNM VAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDVPL SSAE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLY n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 ARG n 1 11 ARG n 1 12 VAL n 1 13 LEU n 1 14 ASP n 1 15 VAL n 1 16 GLU n 1 17 VAL n 1 18 TYR n 1 19 SER n 1 20 SER n 1 21 ARG n 1 22 SER n 1 23 LYS n 1 24 VAL n 1 25 TYR n 1 26 VAL n 1 27 ALA n 1 28 VAL n 1 29 ASP n 1 30 GLY n 1 31 THR n 1 32 THR n 1 33 VAL n 1 34 LEU n 1 35 GLU n 1 36 ASP n 1 37 GLU n 1 38 ALA n 1 39 ARG n 1 40 GLU n 1 41 GLN n 1 42 GLY n 1 43 ARG n 1 44 GLY n 1 45 ILE n 1 46 HIS n 1 47 VAL n 1 48 ILE n 1 49 VAL n 1 50 LEU n 1 51 ASN n 1 52 GLN n 1 53 ALA n 1 54 THR n 1 55 GLY n 1 56 HIS n 1 57 VAL n 1 58 MET n 1 59 ALA n 1 60 LYS n 1 61 ARG n 1 62 VAL n 1 63 PHE n 1 64 ASP n 1 65 THR n 1 66 TYR n 1 67 SER n 1 68 PRO n 1 69 HIS n 1 70 GLU n 1 71 ASP n 1 72 GLU n 1 73 ALA n 1 74 MET n 1 75 VAL n 1 76 LEU n 1 77 PHE n 1 78 LEU n 1 79 ASN n 1 80 MET n 1 81 VAL n 1 82 ALA n 1 83 PRO n 1 84 GLY n 1 85 ARG n 1 86 VAL n 1 87 LEU n 1 88 ILE n 1 89 CYS n 1 90 THR n 1 91 VAL n 1 92 LYS n 1 93 ASP n 1 94 GLU n 1 95 GLY n 1 96 SER n 1 97 PHE n 1 98 HIS n 1 99 LEU n 1 100 LYS n 1 101 ASP n 1 102 THR n 1 103 ALA n 1 104 LYS n 1 105 ALA n 1 106 LEU n 1 107 LEU n 1 108 ARG n 1 109 SER n 1 110 LEU n 1 111 GLY n 1 112 SER n 1 113 GLN n 1 114 ALA n 1 115 GLY n 1 116 PRO n 1 117 ALA n 1 118 LEU n 1 119 GLY n 1 120 TRP n 1 121 ARG n 1 122 ASP n 1 123 THR n 1 124 TRP n 1 125 ALA n 1 126 PHE n 1 127 VAL n 1 128 GLY n 1 129 ARG n 1 130 LYS n 1 131 GLY n 1 132 GLY n 1 133 PRO n 1 134 VAL n 1 135 PHE n 1 136 GLY n 1 137 GLU n 1 138 LYS n 1 139 HIS n 1 140 SER n 1 141 LYS n 1 142 SER n 1 143 PRO n 1 144 ALA n 1 145 LEU n 1 146 SER n 1 147 SER n 1 148 TRP n 1 149 GLY n 1 150 ASP n 1 151 PRO n 1 152 VAL n 1 153 LEU n 1 154 LEU n 1 155 LYS n 1 156 THR n 1 157 ASP n 1 158 VAL n 1 159 PRO n 1 160 LEU n 1 161 SER n 1 162 SER n 1 163 ALA n 1 164 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 164 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POMGNT1, MGAT1.2, UNQ746/PRO1475' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PMGT1_HUMAN _struct_ref.pdbx_db_accession Q8WZA1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGR VLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDVPLSSAE ; _struct_ref.pdbx_align_begin 92 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5GGO A 6 ? 164 ? Q8WZA1 92 ? 250 ? 92 250 2 1 5GGO B 6 ? 164 ? Q8WZA1 92 ? 250 ? 92 250 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GGO GLY A 1 ? UNP Q8WZA1 ? ? 'expression tag' 87 1 1 5GGO PRO A 2 ? UNP Q8WZA1 ? ? 'expression tag' 88 2 1 5GGO LEU A 3 ? UNP Q8WZA1 ? ? 'expression tag' 89 3 1 5GGO GLY A 4 ? UNP Q8WZA1 ? ? 'expression tag' 90 4 1 5GGO SER A 5 ? UNP Q8WZA1 ? ? 'expression tag' 91 5 2 5GGO GLY B 1 ? UNP Q8WZA1 ? ? 'expression tag' 87 6 2 5GGO PRO B 2 ? UNP Q8WZA1 ? ? 'expression tag' 88 7 2 5GGO LEU B 3 ? UNP Q8WZA1 ? ? 'expression tag' 89 8 2 5GGO GLY B 4 ? UNP Q8WZA1 ? ? 'expression tag' 90 9 2 5GGO SER B 5 ? UNP Q8WZA1 ? ? 'expression tag' 91 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEC D-saccharide n '4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside' ;N-[(2S,3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(4-nitrophenoxy)oxan-3-yl]ethanamide; 4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucoside; 4-nitrophenyl 2-acetamido-2-deoxy-D-glucoside; 4-nitrophenyl 2-acetamido-2-deoxy-glucoside ; 'C14 H18 N2 O8' 342.301 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NGA 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-galactopyranose ;N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GGO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Tris-HCl, PEG-6000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE BL15A1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL15A1 _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GGO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 45.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 54584 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.50 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.901 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GGO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.502 _refine.ls_d_res_low 27.827 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 54322 _refine.ls_number_reflns_R_free 3808 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.78 _refine.ls_percent_reflns_R_free 3.68 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1764 _refine.ls_R_factor_R_free 0.2081 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1752 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5GGG _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.20 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.17 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2288 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 80 _refine_hist.number_atoms_solvent 364 _refine_hist.number_atoms_total 2732 _refine_hist.d_res_high 1.502 _refine_hist.d_res_low 27.827 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 ? 2421 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.628 ? 3292 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.103 ? 871 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.082 ? 386 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 412 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5015 1.5205 . . 137 3613 96.00 . . . 0.3071 . 0.2889 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5205 1.5405 . . 137 3662 100.00 . . . 0.3116 . 0.2698 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5405 1.5616 . . 143 3714 100.00 . . . 0.3229 . 0.2622 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5616 1.5839 . . 138 3663 100.00 . . . 0.2686 . 0.2464 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5839 1.6076 . . 146 3705 100.00 . . . 0.2737 . 0.2432 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6076 1.6327 . . 142 3737 100.00 . . . 0.2861 . 0.2344 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6327 1.6595 . . 141 3696 100.00 . . . 0.2802 . 0.2304 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6595 1.6881 . . 137 3617 100.00 . . . 0.2360 . 0.2182 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6881 1.7188 . . 144 3789 100.00 . . . 0.2393 . 0.2054 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7188 1.7518 . . 137 3677 100.00 . . . 0.1804 . 0.1919 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7518 1.7876 . . 141 3669 100.00 . . . 0.2157 . 0.1981 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7876 1.8264 . . 139 3724 100.00 . . . 0.2465 . 0.1883 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8264 1.8689 . . 142 3680 100.00 . . . 0.2060 . 0.1790 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8689 1.9156 . . 138 3703 100.00 . . . 0.2197 . 0.1807 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9156 1.9674 . . 147 3713 100.00 . . . 0.2040 . 0.1810 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9674 2.0253 . . 141 3690 100.00 . . . 0.2235 . 0.1785 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0253 2.0906 . . 142 3681 100.00 . . . 0.2319 . 0.1733 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0906 2.1653 . . 140 3687 100.00 . . . 0.2190 . 0.1713 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1653 2.2520 . . 145 3702 100.00 . . . 0.2260 . 0.1728 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2520 2.3544 . . 144 3690 100.00 . . . 0.2098 . 0.1672 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3544 2.4785 . . 141 3686 100.00 . . . 0.2140 . 0.1663 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4785 2.6337 . . 144 3715 100.00 . . . 0.1974 . 0.1726 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6337 2.8368 . . 135 3701 100.00 . . . 0.1841 . 0.1701 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8368 3.1220 . . 142 3701 100.00 . . . 0.1790 . 0.1652 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1220 3.5729 . . 141 3688 100.00 . . . 0.1782 . 0.1545 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5729 4.4984 . . 138 3686 100.00 . . . 0.1600 . 0.1454 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4984 27.8313 . . 146 3680 99.00 . . . 0.2156 . 0.1569 . . . . . . . . . . # _struct.entry_id 5GGO _struct.title ;Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GGO _struct_keywords.text 'glycosyltransferease, O-mannosylation, alpha-dystroglycan, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 69 ? VAL A 81 ? HIS A 155 VAL A 167 1 ? 13 HELX_P HELX_P2 AA2 LYS A 100 ? LEU A 110 ? LYS A 186 LEU A 196 1 ? 11 HELX_P HELX_P3 AA3 ALA A 114 ? LEU A 118 ? ALA A 200 LEU A 204 5 ? 5 HELX_P HELX_P4 AA4 HIS B 69 ? VAL B 81 ? HIS B 155 VAL B 167 1 ? 13 HELX_P HELX_P5 AA5 LYS B 100 ? LEU B 110 ? LYS B 186 LEU B 196 1 ? 11 HELX_P HELX_P6 AA6 ALA B 114 ? LEU B 118 ? ALA B 200 LEU B 204 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C LEC . O3 ? ? ? 1_555 C NGA . C1 ? ? C LEC 1 C NGA 2 1_555 ? ? ? ? ? ? ? 1.400 ? ? covale2 covale both ? D LEC . O3 ? ? ? 1_555 D NGA . C1 ? ? D LEC 1 D NGA 2 1_555 ? ? ? ? ? ? ? 1.440 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 132 A . ? GLY 218 A PRO 133 A ? PRO 219 A 1 -6.04 2 GLY 132 B . ? GLY 218 B PRO 133 B ? PRO 219 B 1 1.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 31 ? ASP A 36 ? THR A 117 ASP A 122 AA1 2 VAL A 24 ? VAL A 28 ? VAL A 110 VAL A 114 AA1 3 VAL A 12 ? SER A 19 ? VAL A 98 SER A 105 AA1 4 VAL A 152 ? PRO A 159 ? VAL A 238 PRO A 245 AA2 1 VAL A 57 ? PHE A 63 ? VAL A 143 PHE A 149 AA2 2 GLY A 44 ? LEU A 50 ? GLY A 130 LEU A 136 AA2 3 VAL A 86 ? LYS A 92 ? VAL A 172 LYS A 178 AA2 4 THR A 123 ? ARG A 129 ? THR A 209 ARG A 215 AA2 5 VAL A 134 ? SER A 140 ? VAL A 220 SER A 226 AA3 1 THR B 31 ? ASP B 36 ? THR B 117 ASP B 122 AA3 2 VAL B 24 ? VAL B 28 ? VAL B 110 VAL B 114 AA3 3 LEU B 13 ? SER B 19 ? LEU B 99 SER B 105 AA3 4 VAL B 152 ? VAL B 158 ? VAL B 238 VAL B 244 AA4 1 VAL B 57 ? PHE B 63 ? VAL B 143 PHE B 149 AA4 2 GLY B 44 ? LEU B 50 ? GLY B 130 LEU B 136 AA4 3 VAL B 86 ? LYS B 92 ? VAL B 172 LYS B 178 AA4 4 THR B 123 ? ARG B 129 ? THR B 209 ARG B 215 AA4 5 VAL B 134 ? SER B 140 ? VAL B 220 SER B 226 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ASP A 36 ? O ASP A 122 N VAL A 24 ? N VAL A 110 AA1 2 3 O TYR A 25 ? O TYR A 111 N TYR A 18 ? N TYR A 104 AA1 3 4 N VAL A 15 ? N VAL A 101 O THR A 156 ? O THR A 242 AA2 1 2 O MET A 58 ? O MET A 144 N VAL A 49 ? N VAL A 135 AA2 2 3 N HIS A 46 ? N HIS A 132 O THR A 90 ? O THR A 176 AA2 3 4 N LEU A 87 ? N LEU A 173 O GLY A 128 ? O GLY A 214 AA2 4 5 N ALA A 125 ? N ALA A 211 O LYS A 138 ? O LYS A 224 AA3 1 2 O VAL B 33 ? O VAL B 119 N VAL B 26 ? N VAL B 112 AA3 2 3 O TYR B 25 ? O TYR B 111 N TYR B 18 ? N TYR B 104 AA3 3 4 N LEU B 13 ? N LEU B 99 O VAL B 158 ? O VAL B 244 AA4 1 2 O MET B 58 ? O MET B 144 N VAL B 49 ? N VAL B 135 AA4 2 3 N HIS B 46 ? N HIS B 132 O THR B 90 ? O THR B 176 AA4 3 4 N LEU B 87 ? N LEU B 173 O GLY B 128 ? O GLY B 214 AA4 4 5 N ALA B 125 ? N ALA B 211 O LYS B 138 ? O LYS B 224 # _atom_sites.entry_id 5GGO _atom_sites.fract_transf_matrix[1][1] 0.014282 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011148 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018741 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 87 ? ? ? A . n A 1 2 PRO 2 88 ? ? ? A . n A 1 3 LEU 3 89 ? ? ? A . n A 1 4 GLY 4 90 ? ? ? A . n A 1 5 SER 5 91 ? ? ? A . n A 1 6 GLY 6 92 ? ? ? A . n A 1 7 SER 7 93 ? ? ? A . n A 1 8 GLY 8 94 ? ? ? A . n A 1 9 PRO 9 95 ? ? ? A . n A 1 10 ARG 10 96 ? ? ? A . n A 1 11 ARG 11 97 97 ARG ARG A . n A 1 12 VAL 12 98 98 VAL VAL A . n A 1 13 LEU 13 99 99 LEU LEU A . n A 1 14 ASP 14 100 100 ASP ASP A . n A 1 15 VAL 15 101 101 VAL VAL A . n A 1 16 GLU 16 102 102 GLU GLU A . n A 1 17 VAL 17 103 103 VAL VAL A . n A 1 18 TYR 18 104 104 TYR TYR A . n A 1 19 SER 19 105 105 SER SER A . n A 1 20 SER 20 106 106 SER SER A . n A 1 21 ARG 21 107 107 ARG ARG A . n A 1 22 SER 22 108 108 SER SER A . n A 1 23 LYS 23 109 109 LYS LYS A . n A 1 24 VAL 24 110 110 VAL VAL A . n A 1 25 TYR 25 111 111 TYR TYR A . n A 1 26 VAL 26 112 112 VAL VAL A . n A 1 27 ALA 27 113 113 ALA ALA A . n A 1 28 VAL 28 114 114 VAL VAL A . n A 1 29 ASP 29 115 115 ASP ASP A . n A 1 30 GLY 30 116 116 GLY GLY A . n A 1 31 THR 31 117 117 THR THR A . n A 1 32 THR 32 118 118 THR THR A . n A 1 33 VAL 33 119 119 VAL VAL A . n A 1 34 LEU 34 120 120 LEU LEU A . n A 1 35 GLU 35 121 121 GLU GLU A . n A 1 36 ASP 36 122 122 ASP ASP A . n A 1 37 GLU 37 123 123 GLU GLU A . n A 1 38 ALA 38 124 124 ALA ALA A . n A 1 39 ARG 39 125 125 ARG ARG A . n A 1 40 GLU 40 126 126 GLU GLU A . n A 1 41 GLN 41 127 127 GLN GLN A . n A 1 42 GLY 42 128 128 GLY GLY A . n A 1 43 ARG 43 129 129 ARG ARG A . n A 1 44 GLY 44 130 130 GLY GLY A . n A 1 45 ILE 45 131 131 ILE ILE A . n A 1 46 HIS 46 132 132 HIS HIS A . n A 1 47 VAL 47 133 133 VAL VAL A . n A 1 48 ILE 48 134 134 ILE ILE A . n A 1 49 VAL 49 135 135 VAL VAL A . n A 1 50 LEU 50 136 136 LEU LEU A . n A 1 51 ASN 51 137 137 ASN ASN A . n A 1 52 GLN 52 138 138 GLN GLN A . n A 1 53 ALA 53 139 139 ALA ALA A . n A 1 54 THR 54 140 140 THR THR A . n A 1 55 GLY 55 141 141 GLY GLY A . n A 1 56 HIS 56 142 142 HIS HIS A . n A 1 57 VAL 57 143 143 VAL VAL A . n A 1 58 MET 58 144 144 MET MET A . n A 1 59 ALA 59 145 145 ALA ALA A . n A 1 60 LYS 60 146 146 LYS LYS A . n A 1 61 ARG 61 147 147 ARG ARG A . n A 1 62 VAL 62 148 148 VAL VAL A . n A 1 63 PHE 63 149 149 PHE PHE A . n A 1 64 ASP 64 150 150 ASP ASP A . n A 1 65 THR 65 151 151 THR THR A . n A 1 66 TYR 66 152 152 TYR TYR A . n A 1 67 SER 67 153 153 SER SER A . n A 1 68 PRO 68 154 154 PRO PRO A . n A 1 69 HIS 69 155 155 HIS HIS A . n A 1 70 GLU 70 156 156 GLU GLU A . n A 1 71 ASP 71 157 157 ASP ASP A . n A 1 72 GLU 72 158 158 GLU GLU A . n A 1 73 ALA 73 159 159 ALA ALA A . n A 1 74 MET 74 160 160 MET MET A . n A 1 75 VAL 75 161 161 VAL VAL A . n A 1 76 LEU 76 162 162 LEU LEU A . n A 1 77 PHE 77 163 163 PHE PHE A . n A 1 78 LEU 78 164 164 LEU LEU A . n A 1 79 ASN 79 165 165 ASN ASN A . n A 1 80 MET 80 166 166 MET MET A . n A 1 81 VAL 81 167 167 VAL VAL A . n A 1 82 ALA 82 168 168 ALA ALA A . n A 1 83 PRO 83 169 169 PRO PRO A . n A 1 84 GLY 84 170 170 GLY GLY A . n A 1 85 ARG 85 171 171 ARG ARG A . n A 1 86 VAL 86 172 172 VAL VAL A . n A 1 87 LEU 87 173 173 LEU LEU A . n A 1 88 ILE 88 174 174 ILE ILE A . n A 1 89 CYS 89 175 175 CYS CYS A . n A 1 90 THR 90 176 176 THR THR A . n A 1 91 VAL 91 177 177 VAL VAL A . n A 1 92 LYS 92 178 178 LYS LYS A . n A 1 93 ASP 93 179 179 ASP ASP A . n A 1 94 GLU 94 180 180 GLU GLU A . n A 1 95 GLY 95 181 181 GLY GLY A . n A 1 96 SER 96 182 182 SER SER A . n A 1 97 PHE 97 183 183 PHE PHE A . n A 1 98 HIS 98 184 184 HIS HIS A . n A 1 99 LEU 99 185 185 LEU LEU A . n A 1 100 LYS 100 186 186 LYS LYS A . n A 1 101 ASP 101 187 187 ASP ASP A . n A 1 102 THR 102 188 188 THR THR A . n A 1 103 ALA 103 189 189 ALA ALA A . n A 1 104 LYS 104 190 190 LYS LYS A . n A 1 105 ALA 105 191 191 ALA ALA A . n A 1 106 LEU 106 192 192 LEU LEU A . n A 1 107 LEU 107 193 193 LEU LEU A . n A 1 108 ARG 108 194 194 ARG ARG A . n A 1 109 SER 109 195 195 SER SER A . n A 1 110 LEU 110 196 196 LEU LEU A . n A 1 111 GLY 111 197 197 GLY GLY A . n A 1 112 SER 112 198 198 SER SER A . n A 1 113 GLN 113 199 199 GLN GLN A . n A 1 114 ALA 114 200 200 ALA ALA A . n A 1 115 GLY 115 201 201 GLY GLY A . n A 1 116 PRO 116 202 202 PRO PRO A . n A 1 117 ALA 117 203 203 ALA ALA A . n A 1 118 LEU 118 204 204 LEU LEU A . n A 1 119 GLY 119 205 205 GLY GLY A . n A 1 120 TRP 120 206 206 TRP TRP A . n A 1 121 ARG 121 207 207 ARG ARG A . n A 1 122 ASP 122 208 208 ASP ASP A . n A 1 123 THR 123 209 209 THR THR A . n A 1 124 TRP 124 210 210 TRP TRP A . n A 1 125 ALA 125 211 211 ALA ALA A . n A 1 126 PHE 126 212 212 PHE PHE A . n A 1 127 VAL 127 213 213 VAL VAL A . n A 1 128 GLY 128 214 214 GLY GLY A . n A 1 129 ARG 129 215 215 ARG ARG A . n A 1 130 LYS 130 216 216 LYS LYS A . n A 1 131 GLY 131 217 217 GLY GLY A . n A 1 132 GLY 132 218 218 GLY GLY A . n A 1 133 PRO 133 219 219 PRO PRO A . n A 1 134 VAL 134 220 220 VAL VAL A . n A 1 135 PHE 135 221 221 PHE PHE A . n A 1 136 GLY 136 222 222 GLY GLY A . n A 1 137 GLU 137 223 223 GLU GLU A . n A 1 138 LYS 138 224 224 LYS LYS A . n A 1 139 HIS 139 225 225 HIS HIS A . n A 1 140 SER 140 226 226 SER SER A . n A 1 141 LYS 141 227 227 LYS LYS A . n A 1 142 SER 142 228 228 SER SER A . n A 1 143 PRO 143 229 229 PRO PRO A . n A 1 144 ALA 144 230 230 ALA ALA A . n A 1 145 LEU 145 231 231 LEU LEU A . n A 1 146 SER 146 232 232 SER SER A . n A 1 147 SER 147 233 233 SER SER A . n A 1 148 TRP 148 234 234 TRP TRP A . n A 1 149 GLY 149 235 235 GLY GLY A . n A 1 150 ASP 150 236 236 ASP ASP A . n A 1 151 PRO 151 237 237 PRO PRO A . n A 1 152 VAL 152 238 238 VAL VAL A . n A 1 153 LEU 153 239 239 LEU LEU A . n A 1 154 LEU 154 240 240 LEU LEU A . n A 1 155 LYS 155 241 241 LYS LYS A . n A 1 156 THR 156 242 242 THR THR A . n A 1 157 ASP 157 243 243 ASP ASP A . n A 1 158 VAL 158 244 244 VAL VAL A . n A 1 159 PRO 159 245 245 PRO PRO A . n A 1 160 LEU 160 246 246 LEU LEU A . n A 1 161 SER 161 247 247 SER SER A . n A 1 162 SER 162 248 248 SER SER A . n A 1 163 ALA 163 249 249 ALA ALA A . n A 1 164 GLU 164 250 ? ? ? A . n B 1 1 GLY 1 87 ? ? ? B . n B 1 2 PRO 2 88 ? ? ? B . n B 1 3 LEU 3 89 ? ? ? B . n B 1 4 GLY 4 90 ? ? ? B . n B 1 5 SER 5 91 ? ? ? B . n B 1 6 GLY 6 92 ? ? ? B . n B 1 7 SER 7 93 ? ? ? B . n B 1 8 GLY 8 94 ? ? ? B . n B 1 9 PRO 9 95 ? ? ? B . n B 1 10 ARG 10 96 ? ? ? B . n B 1 11 ARG 11 97 ? ? ? B . n B 1 12 VAL 12 98 98 VAL VAL B . n B 1 13 LEU 13 99 99 LEU LEU B . n B 1 14 ASP 14 100 100 ASP ASP B . n B 1 15 VAL 15 101 101 VAL VAL B . n B 1 16 GLU 16 102 102 GLU GLU B . n B 1 17 VAL 17 103 103 VAL VAL B . n B 1 18 TYR 18 104 104 TYR TYR B . n B 1 19 SER 19 105 105 SER SER B . n B 1 20 SER 20 106 106 SER SER B . n B 1 21 ARG 21 107 107 ARG ARG B . n B 1 22 SER 22 108 108 SER SER B . n B 1 23 LYS 23 109 109 LYS LYS B . n B 1 24 VAL 24 110 110 VAL VAL B . n B 1 25 TYR 25 111 111 TYR TYR B . n B 1 26 VAL 26 112 112 VAL VAL B . n B 1 27 ALA 27 113 113 ALA ALA B . n B 1 28 VAL 28 114 114 VAL VAL B . n B 1 29 ASP 29 115 115 ASP ASP B . n B 1 30 GLY 30 116 116 GLY GLY B . n B 1 31 THR 31 117 117 THR THR B . n B 1 32 THR 32 118 118 THR THR B . n B 1 33 VAL 33 119 119 VAL VAL B . n B 1 34 LEU 34 120 120 LEU LEU B . n B 1 35 GLU 35 121 121 GLU GLU B . n B 1 36 ASP 36 122 122 ASP ASP B . n B 1 37 GLU 37 123 123 GLU GLU B . n B 1 38 ALA 38 124 124 ALA ALA B . n B 1 39 ARG 39 125 125 ARG ARG B . n B 1 40 GLU 40 126 126 GLU GLU B . n B 1 41 GLN 41 127 127 GLN GLN B . n B 1 42 GLY 42 128 128 GLY GLY B . n B 1 43 ARG 43 129 129 ARG ARG B . n B 1 44 GLY 44 130 130 GLY GLY B . n B 1 45 ILE 45 131 131 ILE ILE B . n B 1 46 HIS 46 132 132 HIS HIS B . n B 1 47 VAL 47 133 133 VAL VAL B . n B 1 48 ILE 48 134 134 ILE ILE B . n B 1 49 VAL 49 135 135 VAL VAL B . n B 1 50 LEU 50 136 136 LEU LEU B . n B 1 51 ASN 51 137 137 ASN ASN B . n B 1 52 GLN 52 138 138 GLN GLN B . n B 1 53 ALA 53 139 139 ALA ALA B . n B 1 54 THR 54 140 140 THR THR B . n B 1 55 GLY 55 141 141 GLY GLY B . n B 1 56 HIS 56 142 142 HIS HIS B . n B 1 57 VAL 57 143 143 VAL VAL B . n B 1 58 MET 58 144 144 MET MET B . n B 1 59 ALA 59 145 145 ALA ALA B . n B 1 60 LYS 60 146 146 LYS LYS B . n B 1 61 ARG 61 147 147 ARG ARG B . n B 1 62 VAL 62 148 148 VAL VAL B . n B 1 63 PHE 63 149 149 PHE PHE B . n B 1 64 ASP 64 150 150 ASP ASP B . n B 1 65 THR 65 151 151 THR THR B . n B 1 66 TYR 66 152 152 TYR TYR B . n B 1 67 SER 67 153 153 SER SER B . n B 1 68 PRO 68 154 154 PRO PRO B . n B 1 69 HIS 69 155 155 HIS HIS B . n B 1 70 GLU 70 156 156 GLU GLU B . n B 1 71 ASP 71 157 157 ASP ASP B . n B 1 72 GLU 72 158 158 GLU GLU B . n B 1 73 ALA 73 159 159 ALA ALA B . n B 1 74 MET 74 160 160 MET MET B . n B 1 75 VAL 75 161 161 VAL VAL B . n B 1 76 LEU 76 162 162 LEU LEU B . n B 1 77 PHE 77 163 163 PHE PHE B . n B 1 78 LEU 78 164 164 LEU LEU B . n B 1 79 ASN 79 165 165 ASN ASN B . n B 1 80 MET 80 166 166 MET MET B . n B 1 81 VAL 81 167 167 VAL VAL B . n B 1 82 ALA 82 168 168 ALA ALA B . n B 1 83 PRO 83 169 169 PRO PRO B . n B 1 84 GLY 84 170 170 GLY GLY B . n B 1 85 ARG 85 171 171 ARG ARG B . n B 1 86 VAL 86 172 172 VAL VAL B . n B 1 87 LEU 87 173 173 LEU LEU B . n B 1 88 ILE 88 174 174 ILE ILE B . n B 1 89 CYS 89 175 175 CYS CYS B . n B 1 90 THR 90 176 176 THR THR B . n B 1 91 VAL 91 177 177 VAL VAL B . n B 1 92 LYS 92 178 178 LYS LYS B . n B 1 93 ASP 93 179 179 ASP ASP B . n B 1 94 GLU 94 180 180 GLU GLU B . n B 1 95 GLY 95 181 181 GLY GLY B . n B 1 96 SER 96 182 182 SER SER B . n B 1 97 PHE 97 183 183 PHE PHE B . n B 1 98 HIS 98 184 184 HIS HIS B . n B 1 99 LEU 99 185 185 LEU LEU B . n B 1 100 LYS 100 186 186 LYS LYS B . n B 1 101 ASP 101 187 187 ASP ASP B . n B 1 102 THR 102 188 188 THR THR B . n B 1 103 ALA 103 189 189 ALA ALA B . n B 1 104 LYS 104 190 190 LYS LYS B . n B 1 105 ALA 105 191 191 ALA ALA B . n B 1 106 LEU 106 192 192 LEU LEU B . n B 1 107 LEU 107 193 193 LEU LEU B . n B 1 108 ARG 108 194 194 ARG ARG B . n B 1 109 SER 109 195 195 SER SER B . n B 1 110 LEU 110 196 196 LEU LEU B . n B 1 111 GLY 111 197 197 GLY GLY B . n B 1 112 SER 112 198 198 SER SER B . n B 1 113 GLN 113 199 199 GLN GLN B . n B 1 114 ALA 114 200 200 ALA ALA B . n B 1 115 GLY 115 201 201 GLY GLY B . n B 1 116 PRO 116 202 202 PRO PRO B . n B 1 117 ALA 117 203 203 ALA ALA B . n B 1 118 LEU 118 204 204 LEU LEU B . n B 1 119 GLY 119 205 205 GLY GLY B . n B 1 120 TRP 120 206 206 TRP TRP B . n B 1 121 ARG 121 207 207 ARG ARG B . n B 1 122 ASP 122 208 208 ASP ASP B . n B 1 123 THR 123 209 209 THR THR B . n B 1 124 TRP 124 210 210 TRP TRP B . n B 1 125 ALA 125 211 211 ALA ALA B . n B 1 126 PHE 126 212 212 PHE PHE B . n B 1 127 VAL 127 213 213 VAL VAL B . n B 1 128 GLY 128 214 214 GLY GLY B . n B 1 129 ARG 129 215 215 ARG ARG B . n B 1 130 LYS 130 216 216 LYS LYS B . n B 1 131 GLY 131 217 217 GLY GLY B . n B 1 132 GLY 132 218 218 GLY GLY B . n B 1 133 PRO 133 219 219 PRO PRO B . n B 1 134 VAL 134 220 220 VAL VAL B . n B 1 135 PHE 135 221 221 PHE PHE B . n B 1 136 GLY 136 222 222 GLY GLY B . n B 1 137 GLU 137 223 223 GLU GLU B . n B 1 138 LYS 138 224 224 LYS LYS B . n B 1 139 HIS 139 225 225 HIS HIS B . n B 1 140 SER 140 226 226 SER SER B . n B 1 141 LYS 141 227 227 LYS LYS B . n B 1 142 SER 142 228 228 SER SER B . n B 1 143 PRO 143 229 229 PRO PRO B . n B 1 144 ALA 144 230 230 ALA ALA B . n B 1 145 LEU 145 231 231 LEU LEU B . n B 1 146 SER 146 232 232 SER SER B . n B 1 147 SER 147 233 233 SER SER B . n B 1 148 TRP 148 234 234 TRP TRP B . n B 1 149 GLY 149 235 235 GLY GLY B . n B 1 150 ASP 150 236 236 ASP ASP B . n B 1 151 PRO 151 237 237 PRO PRO B . n B 1 152 VAL 152 238 238 VAL VAL B . n B 1 153 LEU 153 239 239 LEU LEU B . n B 1 154 LEU 154 240 240 LEU LEU B . n B 1 155 LYS 155 241 241 LYS LYS B . n B 1 156 THR 156 242 242 THR THR B . n B 1 157 ASP 157 243 243 ASP ASP B . n B 1 158 VAL 158 244 244 VAL VAL B . n B 1 159 PRO 159 245 245 PRO PRO B . n B 1 160 LEU 160 246 246 LEU LEU B . n B 1 161 SER 161 247 247 SER SER B . n B 1 162 SER 162 248 248 SER SER B . n B 1 163 ALA 163 249 ? ? ? B . n B 1 164 GLU 164 250 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EDO 1 303 1 EDO EDO B . F 4 HOH 1 401 264 HOH HOH A . F 4 HOH 2 402 175 HOH HOH A . F 4 HOH 3 403 144 HOH HOH A . F 4 HOH 4 404 84 HOH HOH A . F 4 HOH 5 405 13 HOH HOH A . F 4 HOH 6 406 153 HOH HOH A . F 4 HOH 7 407 47 HOH HOH A . F 4 HOH 8 408 155 HOH HOH A . F 4 HOH 9 409 212 HOH HOH A . F 4 HOH 10 410 151 HOH HOH A . F 4 HOH 11 411 297 HOH HOH A . F 4 HOH 12 412 342 HOH HOH A . F 4 HOH 13 413 85 HOH HOH A . F 4 HOH 14 414 148 HOH HOH A . F 4 HOH 15 415 379 HOH HOH A . F 4 HOH 16 416 45 HOH HOH A . F 4 HOH 17 417 202 HOH HOH A . F 4 HOH 18 418 81 HOH HOH A . F 4 HOH 19 419 307 HOH HOH A . F 4 HOH 20 420 137 HOH HOH A . F 4 HOH 21 421 130 HOH HOH A . F 4 HOH 22 422 215 HOH HOH A . F 4 HOH 23 423 207 HOH HOH A . F 4 HOH 24 424 78 HOH HOH A . F 4 HOH 25 425 216 HOH HOH A . F 4 HOH 26 426 185 HOH HOH A . F 4 HOH 27 427 17 HOH HOH A . F 4 HOH 28 428 18 HOH HOH A . F 4 HOH 29 429 75 HOH HOH A . F 4 HOH 30 430 278 HOH HOH A . F 4 HOH 31 431 222 HOH HOH A . F 4 HOH 32 432 289 HOH HOH A . F 4 HOH 33 433 211 HOH HOH A . F 4 HOH 34 434 280 HOH HOH A . F 4 HOH 35 435 341 HOH HOH A . F 4 HOH 36 436 52 HOH HOH A . F 4 HOH 37 437 183 HOH HOH A . F 4 HOH 38 438 318 HOH HOH A . F 4 HOH 39 439 36 HOH HOH A . F 4 HOH 40 440 174 HOH HOH A . F 4 HOH 41 441 24 HOH HOH A . F 4 HOH 42 442 260 HOH HOH A . F 4 HOH 43 443 46 HOH HOH A . F 4 HOH 44 444 68 HOH HOH A . F 4 HOH 45 445 234 HOH HOH A . F 4 HOH 46 446 28 HOH HOH A . F 4 HOH 47 447 169 HOH HOH A . F 4 HOH 48 448 283 HOH HOH A . F 4 HOH 49 449 263 HOH HOH A . F 4 HOH 50 450 136 HOH HOH A . F 4 HOH 51 451 55 HOH HOH A . F 4 HOH 52 452 188 HOH HOH A . F 4 HOH 53 453 223 HOH HOH A . F 4 HOH 54 454 71 HOH HOH A . F 4 HOH 55 455 88 HOH HOH A . F 4 HOH 56 456 238 HOH HOH A . F 4 HOH 57 457 141 HOH HOH A . F 4 HOH 58 458 290 HOH HOH A . F 4 HOH 59 459 29 HOH HOH A . F 4 HOH 60 460 39 HOH HOH A . F 4 HOH 61 461 110 HOH HOH A . F 4 HOH 62 462 270 HOH HOH A . F 4 HOH 63 463 4 HOH HOH A . F 4 HOH 64 464 89 HOH HOH A . F 4 HOH 65 465 61 HOH HOH A . F 4 HOH 66 466 32 HOH HOH A . F 4 HOH 67 467 203 HOH HOH A . F 4 HOH 68 468 63 HOH HOH A . F 4 HOH 69 469 23 HOH HOH A . F 4 HOH 70 470 44 HOH HOH A . F 4 HOH 71 471 48 HOH HOH A . F 4 HOH 72 472 101 HOH HOH A . F 4 HOH 73 473 164 HOH HOH A . F 4 HOH 74 474 82 HOH HOH A . F 4 HOH 75 475 259 HOH HOH A . F 4 HOH 76 476 41 HOH HOH A . F 4 HOH 77 477 56 HOH HOH A . F 4 HOH 78 478 165 HOH HOH A . F 4 HOH 79 479 54 HOH HOH A . F 4 HOH 80 480 292 HOH HOH A . F 4 HOH 81 481 80 HOH HOH A . F 4 HOH 82 482 179 HOH HOH A . F 4 HOH 83 483 265 HOH HOH A . F 4 HOH 84 484 73 HOH HOH A . F 4 HOH 85 485 268 HOH HOH A . F 4 HOH 86 486 128 HOH HOH A . F 4 HOH 87 487 127 HOH HOH A . F 4 HOH 88 488 83 HOH HOH A . F 4 HOH 89 489 135 HOH HOH A . F 4 HOH 90 490 65 HOH HOH A . F 4 HOH 91 491 149 HOH HOH A . F 4 HOH 92 492 59 HOH HOH A . F 4 HOH 93 493 103 HOH HOH A . F 4 HOH 94 494 232 HOH HOH A . F 4 HOH 95 495 27 HOH HOH A . F 4 HOH 96 496 21 HOH HOH A . F 4 HOH 97 497 348 HOH HOH A . F 4 HOH 98 498 317 HOH HOH A . F 4 HOH 99 499 99 HOH HOH A . F 4 HOH 100 500 98 HOH HOH A . F 4 HOH 101 501 309 HOH HOH A . F 4 HOH 102 502 181 HOH HOH A . F 4 HOH 103 503 224 HOH HOH A . F 4 HOH 104 504 325 HOH HOH A . F 4 HOH 105 505 152 HOH HOH A . F 4 HOH 106 506 156 HOH HOH A . F 4 HOH 107 507 100 HOH HOH A . F 4 HOH 108 508 377 HOH HOH A . F 4 HOH 109 509 365 HOH HOH A . F 4 HOH 110 510 64 HOH HOH A . F 4 HOH 111 511 11 HOH HOH A . F 4 HOH 112 512 359 HOH HOH A . F 4 HOH 113 513 187 HOH HOH A . F 4 HOH 114 514 384 HOH HOH A . F 4 HOH 115 515 267 HOH HOH A . F 4 HOH 116 516 42 HOH HOH A . F 4 HOH 117 517 204 HOH HOH A . F 4 HOH 118 518 271 HOH HOH A . F 4 HOH 119 519 104 HOH HOH A . F 4 HOH 120 520 193 HOH HOH A . F 4 HOH 121 521 319 HOH HOH A . F 4 HOH 122 522 236 HOH HOH A . F 4 HOH 123 523 351 HOH HOH A . F 4 HOH 124 524 252 HOH HOH A . F 4 HOH 125 525 134 HOH HOH A . F 4 HOH 126 526 248 HOH HOH A . F 4 HOH 127 527 258 HOH HOH A . F 4 HOH 128 528 62 HOH HOH A . F 4 HOH 129 529 274 HOH HOH A . F 4 HOH 130 530 138 HOH HOH A . F 4 HOH 131 531 331 HOH HOH A . F 4 HOH 132 532 275 HOH HOH A . F 4 HOH 133 533 345 HOH HOH A . F 4 HOH 134 534 244 HOH HOH A . F 4 HOH 135 535 350 HOH HOH A . F 4 HOH 136 536 167 HOH HOH A . F 4 HOH 137 537 132 HOH HOH A . F 4 HOH 138 538 176 HOH HOH A . F 4 HOH 139 539 133 HOH HOH A . F 4 HOH 140 540 237 HOH HOH A . F 4 HOH 141 541 281 HOH HOH A . F 4 HOH 142 542 158 HOH HOH A . F 4 HOH 143 543 301 HOH HOH A . F 4 HOH 144 544 358 HOH HOH A . F 4 HOH 145 545 314 HOH HOH A . F 4 HOH 146 546 285 HOH HOH A . F 4 HOH 147 547 368 HOH HOH A . F 4 HOH 148 548 356 HOH HOH A . F 4 HOH 149 549 287 HOH HOH A . F 4 HOH 150 550 206 HOH HOH A . F 4 HOH 151 551 142 HOH HOH A . F 4 HOH 152 552 230 HOH HOH A . F 4 HOH 153 553 299 HOH HOH A . F 4 HOH 154 554 357 HOH HOH A . F 4 HOH 155 555 105 HOH HOH A . F 4 HOH 156 556 5 HOH HOH A . F 4 HOH 157 557 266 HOH HOH A . F 4 HOH 158 558 296 HOH HOH A . F 4 HOH 159 559 373 HOH HOH A . F 4 HOH 160 560 293 HOH HOH A . F 4 HOH 161 561 246 HOH HOH A . F 4 HOH 162 562 249 HOH HOH A . F 4 HOH 163 563 306 HOH HOH A . F 4 HOH 164 564 324 HOH HOH A . F 4 HOH 165 565 380 HOH HOH A . F 4 HOH 166 566 95 HOH HOH A . F 4 HOH 167 567 294 HOH HOH A . F 4 HOH 168 568 102 HOH HOH A . F 4 HOH 169 569 303 HOH HOH A . F 4 HOH 170 570 91 HOH HOH A . F 4 HOH 171 571 228 HOH HOH A . F 4 HOH 172 572 72 HOH HOH A . F 4 HOH 173 573 205 HOH HOH A . F 4 HOH 174 574 86 HOH HOH A . F 4 HOH 175 575 243 HOH HOH A . F 4 HOH 176 576 364 HOH HOH A . F 4 HOH 177 577 298 HOH HOH A . F 4 HOH 178 578 300 HOH HOH A . F 4 HOH 179 579 200 HOH HOH A . F 4 HOH 180 580 334 HOH HOH A . F 4 HOH 181 581 120 HOH HOH A . F 4 HOH 182 582 277 HOH HOH A . F 4 HOH 183 583 123 HOH HOH A . F 4 HOH 184 584 378 HOH HOH A . F 4 HOH 185 585 370 HOH HOH A . F 4 HOH 186 586 366 HOH HOH A . G 4 HOH 1 401 255 HOH HOH B . G 4 HOH 2 402 251 HOH HOH B . G 4 HOH 3 403 310 HOH HOH B . G 4 HOH 4 404 208 HOH HOH B . G 4 HOH 5 405 182 HOH HOH B . G 4 HOH 6 406 382 HOH HOH B . G 4 HOH 7 407 118 HOH HOH B . G 4 HOH 8 408 320 HOH HOH B . G 4 HOH 9 409 210 HOH HOH B . G 4 HOH 10 410 115 HOH HOH B . G 4 HOH 11 411 66 HOH HOH B . G 4 HOH 12 412 245 HOH HOH B . G 4 HOH 13 413 67 HOH HOH B . G 4 HOH 14 414 196 HOH HOH B . G 4 HOH 15 415 93 HOH HOH B . G 4 HOH 16 416 235 HOH HOH B . G 4 HOH 17 417 305 HOH HOH B . G 4 HOH 18 418 10 HOH HOH B . G 4 HOH 19 419 126 HOH HOH B . G 4 HOH 20 420 92 HOH HOH B . G 4 HOH 21 421 60 HOH HOH B . G 4 HOH 22 422 197 HOH HOH B . G 4 HOH 23 423 192 HOH HOH B . G 4 HOH 24 424 315 HOH HOH B . G 4 HOH 25 425 213 HOH HOH B . G 4 HOH 26 426 227 HOH HOH B . G 4 HOH 27 427 361 HOH HOH B . G 4 HOH 28 428 3 HOH HOH B . G 4 HOH 29 429 9 HOH HOH B . G 4 HOH 30 430 225 HOH HOH B . G 4 HOH 31 431 26 HOH HOH B . G 4 HOH 32 432 383 HOH HOH B . G 4 HOH 33 433 116 HOH HOH B . G 4 HOH 34 434 145 HOH HOH B . G 4 HOH 35 435 226 HOH HOH B . G 4 HOH 36 436 109 HOH HOH B . G 4 HOH 37 437 58 HOH HOH B . G 4 HOH 38 438 220 HOH HOH B . G 4 HOH 39 439 194 HOH HOH B . G 4 HOH 40 440 321 HOH HOH B . G 4 HOH 41 441 22 HOH HOH B . G 4 HOH 42 442 19 HOH HOH B . G 4 HOH 43 443 354 HOH HOH B . G 4 HOH 44 444 338 HOH HOH B . G 4 HOH 45 445 31 HOH HOH B . G 4 HOH 46 446 1 HOH HOH B . G 4 HOH 47 447 160 HOH HOH B . G 4 HOH 48 448 335 HOH HOH B . G 4 HOH 49 449 332 HOH HOH B . G 4 HOH 50 450 53 HOH HOH B . G 4 HOH 51 451 70 HOH HOH B . G 4 HOH 52 452 2 HOH HOH B . G 4 HOH 53 453 49 HOH HOH B . G 4 HOH 54 454 69 HOH HOH B . G 4 HOH 55 455 295 HOH HOH B . G 4 HOH 56 456 231 HOH HOH B . G 4 HOH 57 457 30 HOH HOH B . G 4 HOH 58 458 51 HOH HOH B . G 4 HOH 59 459 94 HOH HOH B . G 4 HOH 60 460 233 HOH HOH B . G 4 HOH 61 461 117 HOH HOH B . G 4 HOH 62 462 34 HOH HOH B . G 4 HOH 63 463 7 HOH HOH B . G 4 HOH 64 464 124 HOH HOH B . G 4 HOH 65 465 168 HOH HOH B . G 4 HOH 66 466 139 HOH HOH B . G 4 HOH 67 467 198 HOH HOH B . G 4 HOH 68 468 286 HOH HOH B . G 4 HOH 69 469 6 HOH HOH B . G 4 HOH 70 470 38 HOH HOH B . G 4 HOH 71 471 367 HOH HOH B . G 4 HOH 72 472 90 HOH HOH B . G 4 HOH 73 473 119 HOH HOH B . G 4 HOH 74 474 178 HOH HOH B . G 4 HOH 75 475 257 HOH HOH B . G 4 HOH 76 476 37 HOH HOH B . G 4 HOH 77 477 201 HOH HOH B . G 4 HOH 78 478 284 HOH HOH B . G 4 HOH 79 479 15 HOH HOH B . G 4 HOH 80 480 12 HOH HOH B . G 4 HOH 81 481 173 HOH HOH B . G 4 HOH 82 482 97 HOH HOH B . G 4 HOH 83 483 108 HOH HOH B . G 4 HOH 84 484 20 HOH HOH B . G 4 HOH 85 485 106 HOH HOH B . G 4 HOH 86 486 189 HOH HOH B . G 4 HOH 87 487 33 HOH HOH B . G 4 HOH 88 488 291 HOH HOH B . G 4 HOH 89 489 159 HOH HOH B . G 4 HOH 90 490 25 HOH HOH B . G 4 HOH 91 491 269 HOH HOH B . G 4 HOH 92 492 171 HOH HOH B . G 4 HOH 93 493 239 HOH HOH B . G 4 HOH 94 494 40 HOH HOH B . G 4 HOH 95 495 166 HOH HOH B . G 4 HOH 96 496 186 HOH HOH B . G 4 HOH 97 497 77 HOH HOH B . G 4 HOH 98 498 79 HOH HOH B . G 4 HOH 99 499 50 HOH HOH B . G 4 HOH 100 500 311 HOH HOH B . G 4 HOH 101 501 163 HOH HOH B . G 4 HOH 102 502 112 HOH HOH B . G 4 HOH 103 503 157 HOH HOH B . G 4 HOH 104 504 121 HOH HOH B . G 4 HOH 105 505 107 HOH HOH B . G 4 HOH 106 506 8 HOH HOH B . G 4 HOH 107 507 242 HOH HOH B . G 4 HOH 108 508 180 HOH HOH B . G 4 HOH 109 509 333 HOH HOH B . G 4 HOH 110 510 16 HOH HOH B . G 4 HOH 111 511 276 HOH HOH B . G 4 HOH 112 512 76 HOH HOH B . G 4 HOH 113 513 114 HOH HOH B . G 4 HOH 114 514 154 HOH HOH B . G 4 HOH 115 515 308 HOH HOH B . G 4 HOH 116 516 140 HOH HOH B . G 4 HOH 117 517 218 HOH HOH B . G 4 HOH 118 518 316 HOH HOH B . G 4 HOH 119 519 352 HOH HOH B . G 4 HOH 120 520 57 HOH HOH B . G 4 HOH 121 521 254 HOH HOH B . G 4 HOH 122 522 96 HOH HOH B . G 4 HOH 123 523 209 HOH HOH B . G 4 HOH 124 524 353 HOH HOH B . G 4 HOH 125 525 161 HOH HOH B . G 4 HOH 126 526 337 HOH HOH B . G 4 HOH 127 527 177 HOH HOH B . G 4 HOH 128 528 355 HOH HOH B . G 4 HOH 129 529 172 HOH HOH B . G 4 HOH 130 530 170 HOH HOH B . G 4 HOH 131 531 87 HOH HOH B . G 4 HOH 132 532 279 HOH HOH B . G 4 HOH 133 533 241 HOH HOH B . G 4 HOH 134 534 304 HOH HOH B . G 4 HOH 135 535 372 HOH HOH B . G 4 HOH 136 536 129 HOH HOH B . G 4 HOH 137 537 363 HOH HOH B . G 4 HOH 138 538 336 HOH HOH B . G 4 HOH 139 539 217 HOH HOH B . G 4 HOH 140 540 250 HOH HOH B . G 4 HOH 141 541 113 HOH HOH B . G 4 HOH 142 542 214 HOH HOH B . G 4 HOH 143 543 256 HOH HOH B . G 4 HOH 144 544 191 HOH HOH B . G 4 HOH 145 545 344 HOH HOH B . G 4 HOH 146 546 122 HOH HOH B . G 4 HOH 147 547 302 HOH HOH B . G 4 HOH 148 548 312 HOH HOH B . G 4 HOH 149 549 74 HOH HOH B . G 4 HOH 150 550 272 HOH HOH B . G 4 HOH 151 551 125 HOH HOH B . G 4 HOH 152 552 327 HOH HOH B . G 4 HOH 153 553 376 HOH HOH B . G 4 HOH 154 554 362 HOH HOH B . G 4 HOH 155 555 240 HOH HOH B . G 4 HOH 156 556 43 HOH HOH B . G 4 HOH 157 557 184 HOH HOH B . G 4 HOH 158 558 247 HOH HOH B . G 4 HOH 159 559 14 HOH HOH B . G 4 HOH 160 560 147 HOH HOH B . G 4 HOH 161 561 162 HOH HOH B . G 4 HOH 162 562 146 HOH HOH B . G 4 HOH 163 563 360 HOH HOH B . G 4 HOH 164 564 339 HOH HOH B . G 4 HOH 165 565 340 HOH HOH B . G 4 HOH 166 566 374 HOH HOH B . G 4 HOH 167 567 282 HOH HOH B . G 4 HOH 168 568 229 HOH HOH B . G 4 HOH 169 569 253 HOH HOH B . G 4 HOH 170 570 347 HOH HOH B . G 4 HOH 171 571 35 HOH HOH B . G 4 HOH 172 572 322 HOH HOH B . G 4 HOH 173 573 143 HOH HOH B . G 4 HOH 174 574 346 HOH HOH B . G 4 HOH 175 575 288 HOH HOH B . G 4 HOH 176 576 190 HOH HOH B . G 4 HOH 177 577 313 HOH HOH B . G 4 HOH 178 578 330 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 577 ? F HOH . 2 1 A HOH 583 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-10 2 'Structure model' 1 1 2016-08-31 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' citation 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' pdbx_struct_oper_list 15 3 'Structure model' pdbx_struct_special_symmetry 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' chem_comp_atom 22 4 'Structure model' chem_comp_bond 23 4 'Structure model' database_2 24 4 'Structure model' pdbx_initial_refinement_model 25 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_chem_comp.mon_nstd_flag' 6 3 'Structure model' '_chem_comp.name' 7 3 'Structure model' '_chem_comp.type' 8 3 'Structure model' '_citation.journal_id_CSD' 9 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 10 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 11 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_chem_comp.pdbx_synonyms' 19 4 'Structure model' '_database_2.pdbx_DOI' 20 4 'Structure model' '_database_2.pdbx_database_accession' 21 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 573 ? ? O B HOH 576 ? ? 1.99 2 1 O A HOH 407 ? ? O A HOH 549 ? ? 2.07 3 1 O A HOH 586 ? ? O B HOH 578 ? ? 2.09 4 1 OH A TYR 152 ? ? O A HOH 401 ? ? 2.09 5 1 O A HOH 553 ? ? O B HOH 500 ? ? 2.13 6 1 O A HOH 549 ? ? O A HOH 559 ? ? 2.14 7 1 O A HOH 437 ? ? O A HOH 533 ? ? 2.14 8 1 O B HOH 480 ? ? O B HOH 491 ? ? 2.15 9 1 OG1 A THR 117 ? ? O A HOH 402 ? ? 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 PRO _pdbx_validate_rmsd_angle.auth_seq_id_1 169 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLY _pdbx_validate_rmsd_angle.auth_seq_id_2 170 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 GLY _pdbx_validate_rmsd_angle.auth_seq_id_3 170 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 108.34 _pdbx_validate_rmsd_angle.angle_target_value 122.30 _pdbx_validate_rmsd_angle.angle_deviation -13.96 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 155 ? ? 83.63 -17.59 2 1 ASP A 179 ? ? 72.19 -75.94 3 1 HIS B 155 ? ? 83.65 -11.87 4 1 ASP B 179 ? ? 73.35 -72.25 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 586 ? 7.22 . 2 1 O ? B HOH 576 ? 5.84 . 3 1 O ? B HOH 577 ? 6.32 . 4 1 O ? B HOH 578 ? 6.73 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 97 ? CG ? A ARG 11 CG 2 1 Y 1 A ARG 97 ? CD ? A ARG 11 CD 3 1 Y 1 A ARG 97 ? NE ? A ARG 11 NE 4 1 Y 1 A ARG 97 ? CZ ? A ARG 11 CZ 5 1 Y 1 A ARG 97 ? NH1 ? A ARG 11 NH1 6 1 Y 1 A ARG 97 ? NH2 ? A ARG 11 NH2 7 1 Y 1 A ARG 125 ? CG ? A ARG 39 CG 8 1 Y 1 A ARG 125 ? CD ? A ARG 39 CD 9 1 Y 1 A ARG 125 ? NE ? A ARG 39 NE 10 1 Y 1 A ARG 125 ? CZ ? A ARG 39 CZ 11 1 Y 1 A ARG 125 ? NH1 ? A ARG 39 NH1 12 1 Y 1 A ARG 125 ? NH2 ? A ARG 39 NH2 13 1 Y 1 A GLU 126 ? CG ? A GLU 40 CG 14 1 Y 1 A GLU 126 ? CD ? A GLU 40 CD 15 1 Y 1 A GLU 126 ? OE1 ? A GLU 40 OE1 16 1 Y 1 A GLU 126 ? OE2 ? A GLU 40 OE2 17 1 Y 1 A GLN 127 ? CG ? A GLN 41 CG 18 1 Y 1 A GLN 127 ? CD ? A GLN 41 CD 19 1 Y 1 A GLN 127 ? OE1 ? A GLN 41 OE1 20 1 Y 1 A GLN 127 ? NE2 ? A GLN 41 NE2 21 1 Y 1 B ARG 125 ? CG ? B ARG 39 CG 22 1 Y 1 B ARG 125 ? CD ? B ARG 39 CD 23 1 Y 1 B ARG 125 ? NE ? B ARG 39 NE 24 1 Y 1 B ARG 125 ? CZ ? B ARG 39 CZ 25 1 Y 1 B ARG 125 ? NH1 ? B ARG 39 NH1 26 1 Y 1 B ARG 125 ? NH2 ? B ARG 39 NH2 27 1 Y 1 B GLU 126 ? CG ? B GLU 40 CG 28 1 Y 1 B GLU 126 ? CD ? B GLU 40 CD 29 1 Y 1 B GLU 126 ? OE1 ? B GLU 40 OE1 30 1 Y 1 B GLU 126 ? OE2 ? B GLU 40 OE2 31 1 Y 1 B GLN 127 ? CG ? B GLN 41 CG 32 1 Y 1 B GLN 127 ? CD ? B GLN 41 CD 33 1 Y 1 B GLN 127 ? OE1 ? B GLN 41 OE1 34 1 Y 1 B GLN 127 ? NE2 ? B GLN 41 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 87 ? A GLY 1 2 1 Y 1 A PRO 88 ? A PRO 2 3 1 Y 1 A LEU 89 ? A LEU 3 4 1 Y 1 A GLY 90 ? A GLY 4 5 1 Y 1 A SER 91 ? A SER 5 6 1 Y 1 A GLY 92 ? A GLY 6 7 1 Y 1 A SER 93 ? A SER 7 8 1 Y 1 A GLY 94 ? A GLY 8 9 1 Y 1 A PRO 95 ? A PRO 9 10 1 Y 1 A ARG 96 ? A ARG 10 11 1 Y 1 A GLU 250 ? A GLU 164 12 1 Y 1 B GLY 87 ? B GLY 1 13 1 Y 1 B PRO 88 ? B PRO 2 14 1 Y 1 B LEU 89 ? B LEU 3 15 1 Y 1 B GLY 90 ? B GLY 4 16 1 Y 1 B SER 91 ? B SER 5 17 1 Y 1 B GLY 92 ? B GLY 6 18 1 Y 1 B SER 93 ? B SER 7 19 1 Y 1 B GLY 94 ? B GLY 8 20 1 Y 1 B PRO 95 ? B PRO 9 21 1 Y 1 B ARG 96 ? B ARG 10 22 1 Y 1 B ARG 97 ? B ARG 11 23 1 Y 1 B ALA 249 ? B ALA 163 24 1 Y 1 B GLU 250 ? B GLU 164 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEC C8 C N N 193 LEC C7 C N N 194 LEC O7 O N N 195 LEC N2 N N N 196 LEC C2 C N R 197 LEC C3 C N R 198 LEC O3 O N N 199 LEC C4 C N S 200 LEC O4 O N N 201 LEC C5 C N R 202 LEC C6 C N N 203 LEC O6 O N N 204 LEC O5 O N N 205 LEC C1 C N S 206 LEC O1 O N N 207 LEC "C1'" C Y N 208 LEC "C2'" C Y N 209 LEC "C3'" C Y N 210 LEC "C4'" C Y N 211 LEC "N1'" N N N 212 LEC "O2'" O N N 213 LEC "O1'" O N N 214 LEC "C5'" C Y N 215 LEC "C6'" C Y N 216 LEC H81 H N N 217 LEC H82 H N N 218 LEC H83 H N N 219 LEC HN2 H N N 220 LEC H2 H N N 221 LEC H3 H N N 222 LEC HO3 H N N 223 LEC H4 H N N 224 LEC HO4 H N N 225 LEC H5 H N N 226 LEC H61 H N N 227 LEC H62 H N N 228 LEC HO6 H N N 229 LEC H1 H N N 230 LEC "H2'" H N N 231 LEC "H3'" H N N 232 LEC "H5'" H N N 233 LEC "H6'" H N N 234 LEU N N N N 235 LEU CA C N S 236 LEU C C N N 237 LEU O O N N 238 LEU CB C N N 239 LEU CG C N N 240 LEU CD1 C N N 241 LEU CD2 C N N 242 LEU OXT O N N 243 LEU H H N N 244 LEU H2 H N N 245 LEU HA H N N 246 LEU HB2 H N N 247 LEU HB3 H N N 248 LEU HG H N N 249 LEU HD11 H N N 250 LEU HD12 H N N 251 LEU HD13 H N N 252 LEU HD21 H N N 253 LEU HD22 H N N 254 LEU HD23 H N N 255 LEU HXT H N N 256 LYS N N N N 257 LYS CA C N S 258 LYS C C N N 259 LYS O O N N 260 LYS CB C N N 261 LYS CG C N N 262 LYS CD C N N 263 LYS CE C N N 264 LYS NZ N N N 265 LYS OXT O N N 266 LYS H H N N 267 LYS H2 H N N 268 LYS HA H N N 269 LYS HB2 H N N 270 LYS HB3 H N N 271 LYS HG2 H N N 272 LYS HG3 H N N 273 LYS HD2 H N N 274 LYS HD3 H N N 275 LYS HE2 H N N 276 LYS HE3 H N N 277 LYS HZ1 H N N 278 LYS HZ2 H N N 279 LYS HZ3 H N N 280 LYS HXT H N N 281 MET N N N N 282 MET CA C N S 283 MET C C N N 284 MET O O N N 285 MET CB C N N 286 MET CG C N N 287 MET SD S N N 288 MET CE C N N 289 MET OXT O N N 290 MET H H N N 291 MET H2 H N N 292 MET HA H N N 293 MET HB2 H N N 294 MET HB3 H N N 295 MET HG2 H N N 296 MET HG3 H N N 297 MET HE1 H N N 298 MET HE2 H N N 299 MET HE3 H N N 300 MET HXT H N N 301 NGA C1 C N R 302 NGA C2 C N R 303 NGA C3 C N R 304 NGA C4 C N R 305 NGA C5 C N R 306 NGA C6 C N N 307 NGA C7 C N N 308 NGA C8 C N N 309 NGA N2 N N N 310 NGA O1 O N N 311 NGA O3 O N N 312 NGA O4 O N N 313 NGA O5 O N N 314 NGA O6 O N N 315 NGA O7 O N N 316 NGA H1 H N N 317 NGA H2 H N N 318 NGA H3 H N N 319 NGA H4 H N N 320 NGA H5 H N N 321 NGA H61 H N N 322 NGA H62 H N N 323 NGA H81 H N N 324 NGA H82 H N N 325 NGA H83 H N N 326 NGA HN2 H N N 327 NGA HO1 H N N 328 NGA HO3 H N N 329 NGA HO4 H N N 330 NGA HO6 H N N 331 PHE N N N N 332 PHE CA C N S 333 PHE C C N N 334 PHE O O N N 335 PHE CB C N N 336 PHE CG C Y N 337 PHE CD1 C Y N 338 PHE CD2 C Y N 339 PHE CE1 C Y N 340 PHE CE2 C Y N 341 PHE CZ C Y N 342 PHE OXT O N N 343 PHE H H N N 344 PHE H2 H N N 345 PHE HA H N N 346 PHE HB2 H N N 347 PHE HB3 H N N 348 PHE HD1 H N N 349 PHE HD2 H N N 350 PHE HE1 H N N 351 PHE HE2 H N N 352 PHE HZ H N N 353 PHE HXT H N N 354 PRO N N N N 355 PRO CA C N S 356 PRO C C N N 357 PRO O O N N 358 PRO CB C N N 359 PRO CG C N N 360 PRO CD C N N 361 PRO OXT O N N 362 PRO H H N N 363 PRO HA H N N 364 PRO HB2 H N N 365 PRO HB3 H N N 366 PRO HG2 H N N 367 PRO HG3 H N N 368 PRO HD2 H N N 369 PRO HD3 H N N 370 PRO HXT H N N 371 SER N N N N 372 SER CA C N S 373 SER C C N N 374 SER O O N N 375 SER CB C N N 376 SER OG O N N 377 SER OXT O N N 378 SER H H N N 379 SER H2 H N N 380 SER HA H N N 381 SER HB2 H N N 382 SER HB3 H N N 383 SER HG H N N 384 SER HXT H N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEC C8 C7 sing N N 182 LEC C7 O7 doub N N 183 LEC C7 N2 sing N N 184 LEC N2 C2 sing N N 185 LEC C2 C3 sing N N 186 LEC C2 C1 sing N N 187 LEC C3 O3 sing N N 188 LEC C3 C4 sing N N 189 LEC C4 O4 sing N N 190 LEC C4 C5 sing N N 191 LEC C5 C6 sing N N 192 LEC C5 O5 sing N N 193 LEC C6 O6 sing N N 194 LEC O5 C1 sing N N 195 LEC C1 O1 sing N N 196 LEC O1 "C1'" sing N N 197 LEC "C1'" "C2'" doub Y N 198 LEC "C1'" "C6'" sing Y N 199 LEC "C2'" "C3'" sing Y N 200 LEC "C3'" "C4'" doub Y N 201 LEC "C4'" "N1'" sing N N 202 LEC "C4'" "C5'" sing Y N 203 LEC "N1'" "O2'" sing N N 204 LEC "N1'" "O1'" doub N N 205 LEC "C5'" "C6'" doub Y N 206 LEC C8 H81 sing N N 207 LEC C8 H82 sing N N 208 LEC C8 H83 sing N N 209 LEC N2 HN2 sing N N 210 LEC C2 H2 sing N N 211 LEC C3 H3 sing N N 212 LEC O3 HO3 sing N N 213 LEC C4 H4 sing N N 214 LEC O4 HO4 sing N N 215 LEC C5 H5 sing N N 216 LEC C6 H61 sing N N 217 LEC C6 H62 sing N N 218 LEC O6 HO6 sing N N 219 LEC C1 H1 sing N N 220 LEC "C2'" "H2'" sing N N 221 LEC "C3'" "H3'" sing N N 222 LEC "C5'" "H5'" sing N N 223 LEC "C6'" "H6'" sing N N 224 LEU N CA sing N N 225 LEU N H sing N N 226 LEU N H2 sing N N 227 LEU CA C sing N N 228 LEU CA CB sing N N 229 LEU CA HA sing N N 230 LEU C O doub N N 231 LEU C OXT sing N N 232 LEU CB CG sing N N 233 LEU CB HB2 sing N N 234 LEU CB HB3 sing N N 235 LEU CG CD1 sing N N 236 LEU CG CD2 sing N N 237 LEU CG HG sing N N 238 LEU CD1 HD11 sing N N 239 LEU CD1 HD12 sing N N 240 LEU CD1 HD13 sing N N 241 LEU CD2 HD21 sing N N 242 LEU CD2 HD22 sing N N 243 LEU CD2 HD23 sing N N 244 LEU OXT HXT sing N N 245 LYS N CA sing N N 246 LYS N H sing N N 247 LYS N H2 sing N N 248 LYS CA C sing N N 249 LYS CA CB sing N N 250 LYS CA HA sing N N 251 LYS C O doub N N 252 LYS C OXT sing N N 253 LYS CB CG sing N N 254 LYS CB HB2 sing N N 255 LYS CB HB3 sing N N 256 LYS CG CD sing N N 257 LYS CG HG2 sing N N 258 LYS CG HG3 sing N N 259 LYS CD CE sing N N 260 LYS CD HD2 sing N N 261 LYS CD HD3 sing N N 262 LYS CE NZ sing N N 263 LYS CE HE2 sing N N 264 LYS CE HE3 sing N N 265 LYS NZ HZ1 sing N N 266 LYS NZ HZ2 sing N N 267 LYS NZ HZ3 sing N N 268 LYS OXT HXT sing N N 269 MET N CA sing N N 270 MET N H sing N N 271 MET N H2 sing N N 272 MET CA C sing N N 273 MET CA CB sing N N 274 MET CA HA sing N N 275 MET C O doub N N 276 MET C OXT sing N N 277 MET CB CG sing N N 278 MET CB HB2 sing N N 279 MET CB HB3 sing N N 280 MET CG SD sing N N 281 MET CG HG2 sing N N 282 MET CG HG3 sing N N 283 MET SD CE sing N N 284 MET CE HE1 sing N N 285 MET CE HE2 sing N N 286 MET CE HE3 sing N N 287 MET OXT HXT sing N N 288 NGA C1 C2 sing N N 289 NGA C1 O1 sing N N 290 NGA C1 O5 sing N N 291 NGA C1 H1 sing N N 292 NGA C2 C3 sing N N 293 NGA C2 N2 sing N N 294 NGA C2 H2 sing N N 295 NGA C3 C4 sing N N 296 NGA C3 O3 sing N N 297 NGA C3 H3 sing N N 298 NGA C4 C5 sing N N 299 NGA C4 O4 sing N N 300 NGA C4 H4 sing N N 301 NGA C5 C6 sing N N 302 NGA C5 O5 sing N N 303 NGA C5 H5 sing N N 304 NGA C6 O6 sing N N 305 NGA C6 H61 sing N N 306 NGA C6 H62 sing N N 307 NGA C7 C8 sing N N 308 NGA C7 N2 sing N N 309 NGA C7 O7 doub N N 310 NGA C8 H81 sing N N 311 NGA C8 H82 sing N N 312 NGA C8 H83 sing N N 313 NGA N2 HN2 sing N N 314 NGA O1 HO1 sing N N 315 NGA O3 HO3 sing N N 316 NGA O4 HO4 sing N N 317 NGA O6 HO6 sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PRO N CA sing N N 342 PRO N CD sing N N 343 PRO N H sing N N 344 PRO CA C sing N N 345 PRO CA CB sing N N 346 PRO CA HA sing N N 347 PRO C O doub N N 348 PRO C OXT sing N N 349 PRO CB CG sing N N 350 PRO CB HB2 sing N N 351 PRO CB HB3 sing N N 352 PRO CG CD sing N N 353 PRO CG HG2 sing N N 354 PRO CG HG3 sing N N 355 PRO CD HD2 sing N N 356 PRO CD HD3 sing N N 357 PRO OXT HXT sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal JSPS Japan 26840029 1 JSPS Japan 16K07284 2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 LEC 1 C LEC 1 C LEC 1 n C 2 NGA 2 C NGA 2 C NGA 2 n D 2 LEC 1 D LEC 1 C LEC 3 n D 2 NGA 2 D NGA 2 C NGA 4 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NGA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAcb NGA 'COMMON NAME' GMML 1.0 N-acetyl-b-D-galactopyranosamine NGA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpNAc NGA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_1*O(C^EC^ZC^EC^EC^ZC^E$3)/6NO/9=O_2*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][<C6N1O2>]{[(1+1)][b-D-GlcpNAc]{[(3+1)][b-D-GalpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NGA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 LEC _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 LEC 1 n 2 NGA 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5GGG _pdbx_initial_refinement_model.details ? #