HEADER CHAPERONE 20-JUN-16 5GHU TITLE CRYSTAL STRUCTURE OF YADV CHAPERONE AT 1.63 ANGSTROM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE FIMBRIAL CHAPERONE YADV; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: ECPD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CODONPLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS CU CHAPERONE, FIMBRIAE, PILIN, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR N.K.PANDEY,N.S.BHAVESH REVDAT 3 08-NOV-23 5GHU 1 REMARK REVDAT 2 22-JUL-20 5GHU 1 TITLE COMPND JRNL REVDAT 1 28-JUN-17 5GHU 0 JRNL AUTH N.K.PANDEY,G.VERMA,G.S.KUSHWAHA,M.SUAR,N.S.BHAVESH JRNL TITL CRYSTAL STRUCTURE OF THE USHER CHAPERONE YADV REVEALS A JRNL TITL 2 MONOMER WITH THE PROLINE LOCK IN CLOSED CONFORMATION JRNL TITL 3 SUGGESTIVE OF AN INTERMEDIATE STATE. JRNL REF FEBS LETT. 2020 JRNL REFN ISSN 0014-5793 JRNL PMID 32649775 JRNL DOI 10.1002/1873-3468.13883 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 36961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.0107 - 3.8265 1.00 2877 152 0.1608 0.1651 REMARK 3 2 3.8265 - 3.0397 1.00 2785 127 0.1652 0.2005 REMARK 3 3 3.0397 - 2.6562 1.00 2735 148 0.1764 0.1775 REMARK 3 4 2.6562 - 2.4137 1.00 2696 160 0.1793 0.1961 REMARK 3 5 2.4137 - 2.2409 1.00 2711 156 0.1729 0.1984 REMARK 3 6 2.2409 - 2.1089 1.00 2722 111 0.1735 0.2022 REMARK 3 7 2.1089 - 2.0033 1.00 2679 142 0.1559 0.1756 REMARK 3 8 2.0033 - 1.9162 1.00 2670 159 0.1587 0.2136 REMARK 3 9 1.9162 - 1.8425 0.99 2689 129 0.1663 0.1593 REMARK 3 10 1.8425 - 1.7789 0.99 2675 138 0.1599 0.1991 REMARK 3 11 1.7789 - 1.7233 0.98 2624 124 0.1692 0.1812 REMARK 3 12 1.7233 - 1.6741 0.98 2640 139 0.1736 0.2121 REMARK 3 13 1.6741 - 1.6300 0.99 2624 149 0.1952 0.2479 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 1626 REMARK 3 ANGLE : 1.590 2205 REMARK 3 CHIRALITY : 0.087 245 REMARK 3 PLANARITY : 0.010 283 REMARK 3 DIHEDRAL : 12.584 597 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6024 54.8081 14.2463 REMARK 3 T TENSOR REMARK 3 T11: 0.4585 T22: 0.1937 REMARK 3 T33: 0.2304 T12: -0.0124 REMARK 3 T13: 0.0029 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 0.6290 L22: 2.6153 REMARK 3 L33: 1.7644 L12: -0.7140 REMARK 3 L13: -0.2052 L23: -0.0394 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: -0.1084 S13: 0.1278 REMARK 3 S21: 0.1169 S22: 0.0873 S23: -0.0526 REMARK 3 S31: -0.7851 S32: 0.0801 S33: -0.0624 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5209 29.8616 17.6974 REMARK 3 T TENSOR REMARK 3 T11: 0.1587 T22: 0.2100 REMARK 3 T33: 0.2043 T12: 0.0009 REMARK 3 T13: -0.0093 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.8511 L22: 1.0220 REMARK 3 L33: 1.5284 L12: 0.0638 REMARK 3 L13: 0.5615 L23: -0.2468 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: -0.2207 S13: -0.1076 REMARK 3 S21: -0.0230 S22: 0.0515 S23: 0.1375 REMARK 3 S31: 0.0540 S32: -0.2132 S33: -0.0556 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 3 UNMODELLED BLOBS AT SYMMETRY REMARK 3 POSITIONS REMARK 4 REMARK 4 5GHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1300000799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 - 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5417 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36961 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 78.838 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.51100 REMARK 200 R SYM FOR SHELL (I) : 0.51100 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3ME0, 1KLF, 3F65 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 ACETATE, 0.3 M SODIUM FORMATE, 30% PEG 400, PH 4.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.92000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 22.92000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.14000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.78000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.14000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.78000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.92000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.14000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.78000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 22.92000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.14000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.78000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 42 REMARK 465 ASN A 43 REMARK 465 ALA A 44 REMARK 465 GLU A 45 REMARK 465 PRO A 46 REMARK 465 GLY A 47 REMARK 465 SER A 48 REMARK 465 ILE A 49 REMARK 465 LYS A 98 REMARK 465 PRO A 99 REMARK 465 ASP A 100 REMARK 465 ALA A 101 REMARK 465 GLU A 102 REMARK 465 LYS A 103 REMARK 465 VAL A 104 REMARK 465 ALA A 105 REMARK 465 ASN A 106 REMARK 465 GLN A 107 REMARK 465 SER A 108 REMARK 465 GLU A 146 REMARK 465 GLY A 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 109 CG CD1 CD2 REMARK 470 LEU A 110 CG CD1 CD2 REMARK 470 LEU A 112 CG CD1 CD2 REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 ASN A 196 CG OD1 ND2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 ARG A 221 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 405 O HOH A 579 1.88 REMARK 500 O HOH A 418 O HOH A 476 1.98 REMARK 500 O HOH A 549 O HOH A 632 2.01 REMARK 500 O HOH A 534 O HOH A 571 2.01 REMARK 500 O HOH A 613 O HOH A 620 2.10 REMARK 500 O HOH A 630 O HOH A 634 2.10 REMARK 500 O HOH A 529 O HOH A 573 2.13 REMARK 500 O HOH A 580 O HOH A 586 2.14 REMARK 500 O GLY A 144 O HOH A 401 2.16 REMARK 500 O HOH A 601 O HOH A 643 2.17 REMARK 500 O HOH A 402 O HOH A 540 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 570 O HOH A 582 6554 2.00 REMARK 500 O HOH A 598 O HOH A 601 6554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 9 NE - CZ - NH1 ANGL. DEV. = -8.9 DEGREES REMARK 500 ARG A 9 NE - CZ - NH2 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 648 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 649 DISTANCE = 6.91 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 305 DBREF 5GHU A 2 222 UNP P33128 YADV_ECOLI 26 246 SEQADV 5GHU MET A 1 UNP P33128 EXPRESSION TAG SEQRES 1 A 222 MET ASP ILE VAL ILE SER GLY THR ARG VAL ILE TYR LYS SEQRES 2 A 222 SER ASP GLN LYS SER VAL ASN VAL ARG LEU GLU ASN LYS SEQRES 3 A 222 GLY ASN ASN PRO LEU LEU VAL GLN SER TRP LEU ASP THR SEQRES 4 A 222 GLY ASP ASP ASN ALA GLU PRO GLY SER ILE THR VAL PRO SEQRES 5 A 222 PHE THR ALA THR PRO PRO VAL SER ARG ILE ASP ALA LYS SEQRES 6 A 222 ARG GLY GLN THR ILE LYS LEU MET TYR THR ALA SER THR SEQRES 7 A 222 SER LEU PRO LYS ASP ARG GLU SER VAL PHE TRP PHE ASN SEQRES 8 A 222 VAL LEU GLU VAL PRO PRO LYS PRO ASP ALA GLU LYS VAL SEQRES 9 A 222 ALA ASN GLN SER LEU LEU GLN LEU ALA PHE ARG THR ARG SEQRES 10 A 222 ILE LYS LEU PHE TYR ARG PRO ASP GLY LEU LYS GLY ASN SEQRES 11 A 222 PRO SER GLU ALA PRO LEU ALA LEU LYS TRP PHE TRP SER SEQRES 12 A 222 GLY SER GLU GLY LYS ALA SER LEU ARG VAL THR ASN PRO SEQRES 13 A 222 THR PRO TYR TYR VAL SER PHE SER SER GLY ASP LEU GLU SEQRES 14 A 222 ALA SER GLY LYS ARG TYR PRO ILE ASP VAL LYS MET ILE SEQRES 15 A 222 ALA PRO PHE SER ASP GLU VAL MET LYS VAL ASN GLY LEU SEQRES 16 A 222 ASN GLY LYS ALA ASN SER ALA LYS VAL HIS PHE TYR ALA SEQRES 17 A 222 ILE ASN ASP PHE GLY GLY ALA ILE GLU GLY ASN ALA ARG SEQRES 18 A 222 LEU HET CL A 301 1 HET ACT A 302 7 HET ACT A 303 7 HET FMT A 304 5 HET PGE A 305 24 HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM FMT FORMIC ACID HETNAM PGE TRIETHYLENE GLYCOL FORMUL 2 CL CL 1- FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 5 FMT C H2 O2 FORMUL 6 PGE C6 H14 O4 FORMUL 7 HOH *249(H2 O) HELIX 1 AA1 ASN A 130 SER A 132 5 3 HELIX 2 AA2 GLU A 133 LEU A 138 1 6 SHEET 1 AA1 4 ILE A 3 ILE A 5 0 SHEET 2 AA1 4 VAL A 19 ASN A 25 -1 O GLU A 24 N VAL A 4 SHEET 3 AA1 4 GLY A 67 TYR A 74 -1 O LEU A 72 N VAL A 19 SHEET 4 AA1 4 PHE A 53 THR A 56 -1 N THR A 56 O LYS A 71 SHEET 1 AA2 5 ARG A 9 LYS A 13 0 SHEET 2 AA2 5 PHE A 114 ARG A 123 1 O PHE A 121 N TYR A 12 SHEET 3 AA2 5 SER A 86 VAL A 95 -1 N SER A 86 O TYR A 122 SHEET 4 AA2 5 LEU A 31 ASP A 38 -1 N TRP A 36 O ASN A 91 SHEET 5 AA2 5 VAL A 59 ILE A 62 -1 O SER A 60 N VAL A 33 SHEET 1 AA3 3 LYS A 139 SER A 143 0 SHEET 2 AA3 3 SER A 150 ASN A 155 -1 O ARG A 152 N PHE A 141 SHEET 3 AA3 3 SER A 186 LYS A 191 -1 O SER A 186 N ASN A 155 SHEET 1 AA4 4 LYS A 173 PRO A 176 0 SHEET 2 AA4 4 PHE A 163 ALA A 170 -1 N LEU A 168 O TYR A 175 SHEET 3 AA4 4 LYS A 203 ILE A 209 -1 O TYR A 207 N SER A 164 SHEET 4 AA4 4 ALA A 215 ARG A 221 -1 O ALA A 220 N VAL A 204 CISPEP 1 THR A 56 PRO A 57 0 -3.08 CISPEP 2 THR A 56 PRO A 57 0 1.38 CISPEP 3 GLY A 144 SER A 145 0 1.23 SITE 1 AC1 3 ARG A 9 LYS A 119 ILE A 209 SITE 1 AC2 1 HOH A 426 SITE 1 AC3 1 GLN A 34 SITE 1 AC4 4 ASP A 83 PHE A 212 HOH A 405 HOH A 413 CRYST1 100.280 127.560 45.840 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009972 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007839 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021815 0.00000