data_5GJ2 # _entry.id 5GJ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5GJ2 WWPDB D_1300000859 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2017-10-11 _pdbx_database_PDB_obs_spr.pdb_id 5Y8B _pdbx_database_PDB_obs_spr.replace_pdb_id 5GJ2 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5GIZ PDB . unspecified 5GJ0 PDB . unspecified 5GJ1 PDB . unspecified 5GJ3 PDB . # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GJ2 _pdbx_database_status.recvd_initial_deposition_date 2016-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rahman, M.M.' 1 'Naoe, Y.' 2 'Nakamura, N.' 3 'Shiro, Y.' 4 'Sugimoto, H.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'to be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural Basis for Cature and Transfer of Heme by Periplasmic Heme-Binding Proteins in Bacterial Heme Acquisition System' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Naoe, Y.' 1 primary 'Nakamura, N.' 2 primary 'Rahman, M.M.' 3 primary 'Doi, A.' 4 primary 'Nakamura, H.' 5 primary 'Shiro, Y.' 6 primary 'Sugimoto, H.' 7 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5GJ2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.039 _cell.length_a_esd ? _cell.length_b 71.039 _cell.length_b_esd ? _cell.length_c 78.206 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GJ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Periplasmic binding protein' 28246.318 1 ? ? 'heme binding domain, UNP residues 96-360' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'periplasmic heme-binding protein RhuT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLA QIRAAGVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAG RNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDD LYLLGMGPRTGQALTDLTIAFYDAAQGSRP ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLA QIRAAGVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAG RNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDD LYLLGMGPRTGQALTDLTIAFYDAAQGSRP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier A5UZ69_ROSS1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLU n 1 7 ARG n 1 8 ILE n 1 9 VAL n 1 10 SER n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 ASP n 1 15 ILE n 1 16 THR n 1 17 GLU n 1 18 ILE n 1 19 ILE n 1 20 PHE n 1 21 ALA n 1 22 LEU n 1 23 GLY n 1 24 MET n 1 25 GLY n 1 26 GLU n 1 27 TYR n 1 28 VAL n 1 29 VAL n 1 30 GLY n 1 31 VAL n 1 32 ASP n 1 33 SER n 1 34 SER n 1 35 ALA n 1 36 THR n 1 37 TYR n 1 38 PRO n 1 39 PRO n 1 40 GLU n 1 41 ARG n 1 42 THR n 1 43 LYS n 1 44 MET n 1 45 LEU n 1 46 PRO n 1 47 ASN n 1 48 ILE n 1 49 GLY n 1 50 TYR n 1 51 GLN n 1 52 ARG n 1 53 ARG n 1 54 LEU n 1 55 SER n 1 56 ALA n 1 57 GLU n 1 58 GLY n 1 59 ILE n 1 60 LEU n 1 61 SER n 1 62 LEU n 1 63 ASN n 1 64 PRO n 1 65 THR n 1 66 LEU n 1 67 VAL n 1 68 ILE n 1 69 GLY n 1 70 ASP n 1 71 GLU n 1 72 ALA n 1 73 ALA n 1 74 GLY n 1 75 PRO n 1 76 PRO n 1 77 GLU n 1 78 THR n 1 79 LEU n 1 80 ALA n 1 81 GLN n 1 82 ILE n 1 83 ARG n 1 84 ALA n 1 85 ALA n 1 86 GLY n 1 87 VAL n 1 88 PRO n 1 89 LEU n 1 90 ALA n 1 91 ILE n 1 92 THR n 1 93 ALA n 1 94 ASP n 1 95 PRO n 1 96 PRO n 1 97 SER n 1 98 LEU n 1 99 ASP n 1 100 ALA n 1 101 PRO n 1 102 GLN n 1 103 GLN n 1 104 LYS n 1 105 ILE n 1 106 ARG n 1 107 PHE n 1 108 VAL n 1 109 ALA n 1 110 GLN n 1 111 ALA n 1 112 LEU n 1 113 GLY n 1 114 ILE n 1 115 PRO n 1 116 GLN n 1 117 ARG n 1 118 GLY n 1 119 GLU n 1 120 ARG n 1 121 LEU n 1 122 ALA n 1 123 ALA n 1 124 GLN n 1 125 VAL n 1 126 GLU n 1 127 ALA n 1 128 GLU n 1 129 ILE n 1 130 ALA n 1 131 ALA n 1 132 ALA n 1 133 ARG n 1 134 ASP n 1 135 LEU n 1 136 ALA n 1 137 ARG n 1 138 ARG n 1 139 ILE n 1 140 THR n 1 141 ASN n 1 142 PRO n 1 143 PRO n 1 144 HIS n 1 145 VAL n 1 146 LEU n 1 147 PHE n 1 148 LEU n 1 149 TYR n 1 150 LEU n 1 151 ARG n 1 152 GLY n 1 153 THR n 1 154 ASP n 1 155 VAL n 1 156 GLN n 1 157 GLN n 1 158 VAL n 1 159 ALA n 1 160 GLY n 1 161 ARG n 1 162 ASN n 1 163 THR n 1 164 ALA n 1 165 VAL n 1 166 ASP n 1 167 VAL n 1 168 MET n 1 169 ILE n 1 170 ALA n 1 171 ALA n 1 172 ALA n 1 173 GLY n 1 174 GLY n 1 175 ILE n 1 176 ASN n 1 177 ALA n 1 178 ALA n 1 179 ALA n 1 180 ASP n 1 181 ALA n 1 182 GLY n 1 183 ILE n 1 184 VAL n 1 185 GLU n 1 186 PHE n 1 187 LYS n 1 188 PRO n 1 189 LEU n 1 190 SER n 1 191 PRO n 1 192 GLU n 1 193 VAL n 1 194 VAL n 1 195 ILE n 1 196 ALA n 1 197 ALA n 1 198 GLN n 1 199 PRO n 1 200 ASP n 1 201 VAL n 1 202 LEU n 1 203 LEU n 1 204 VAL n 1 205 LEU n 1 206 ASP n 1 207 LYS n 1 208 GLY n 1 209 LEU n 1 210 GLU n 1 211 SER n 1 212 VAL n 1 213 GLY n 1 214 GLY n 1 215 VAL n 1 216 ASP n 1 217 GLY n 1 218 LEU n 1 219 LEU n 1 220 LYS n 1 221 ILE n 1 222 PRO n 1 223 GLY n 1 224 LEU n 1 225 ALA n 1 226 ASP n 1 227 THR n 1 228 PRO n 1 229 ALA n 1 230 GLY n 1 231 ARG n 1 232 GLN n 1 233 ARG n 1 234 ARG n 1 235 ILE n 1 236 ILE n 1 237 ALA n 1 238 LEU n 1 239 ASP n 1 240 ASP n 1 241 LEU n 1 242 TYR n 1 243 LEU n 1 244 LEU n 1 245 GLY n 1 246 MET n 1 247 GLY n 1 248 PRO n 1 249 ARG n 1 250 THR n 1 251 GLY n 1 252 GLN n 1 253 ALA n 1 254 LEU n 1 255 THR n 1 256 ASP n 1 257 LEU n 1 258 THR n 1 259 ILE n 1 260 ALA n 1 261 PHE n 1 262 TYR n 1 263 ASP n 1 264 ALA n 1 265 ALA n 1 266 GLN n 1 267 GLY n 1 268 SER n 1 269 ARG n 1 270 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 270 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RoseRS_3565 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RS-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Roseiflexus sp. RS-1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 357808 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A5UZ69_ROSS1 _struct_ref.pdbx_db_accession A5UZ69 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLAQIRAA GVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAGRNTAV DVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDDLYLLG MGPRTGQALTDLTIAFYDAAQGSRP ; _struct_ref.pdbx_align_begin 96 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GJ2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 270 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A5UZ69 _struct_ref_seq.db_align_beg 96 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 360 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 96 _struct_ref_seq.pdbx_auth_seq_align_end 360 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GJ2 GLY A 1 ? UNP A5UZ69 ? ? 'expression tag' 91 1 1 5GJ2 PRO A 2 ? UNP A5UZ69 ? ? 'expression tag' 92 2 1 5GJ2 LEU A 3 ? UNP A5UZ69 ? ? 'expression tag' 93 3 1 5GJ2 GLY A 4 ? UNP A5UZ69 ? ? 'expression tag' 94 4 1 5GJ2 SER A 5 ? UNP A5UZ69 ? ? 'expression tag' 95 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GJ2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '9% PEG 400, 0.2 M MgCl2, 50 mM glycine' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GJ2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.400 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9202 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.600 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 26.500 _reflns.pdbx_netI_over_sigmaI 8.700 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.400 2.440 ? ? ? ? ? ? ? 94.500 ? ? ? ? 0.501 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 1 1 ? ? 2.440 2.490 ? ? ? ? ? ? ? 99.100 ? ? ? ? 0.485 ? ? ? ? ? ? ? ? 8.900 ? ? ? ? ? ? ? 2 1 ? ? 2.490 2.530 ? ? ? ? ? ? ? 98.300 ? ? ? ? 0.425 ? ? ? ? ? ? ? ? 10.100 ? ? ? ? ? ? ? 3 1 ? ? 2.530 2.590 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.386 ? ? ? ? ? ? ? ? 11.600 ? ? ? ? ? ? ? 4 1 ? ? 2.590 2.640 ? ? ? ? ? ? ? 98.900 ? ? ? ? 0.363 ? ? ? ? ? ? ? ? 12.600 ? ? ? ? ? ? ? 5 1 ? ? 2.640 2.700 ? ? ? ? ? ? ? 98.900 ? ? ? ? 0.346 ? ? ? ? ? ? ? ? 13.200 ? ? ? ? ? ? ? 6 1 ? ? 2.700 2.770 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.288 ? ? ? ? ? ? ? ? 13.500 ? ? ? ? ? ? ? 7 1 ? ? 2.770 2.850 ? ? ? ? ? ? ? 99.400 ? ? ? ? 0.259 ? ? ? ? ? ? ? ? 13.700 ? ? ? ? ? ? ? 8 1 ? ? 2.850 2.930 ? ? ? ? ? ? ? 99.300 ? ? ? ? 0.229 ? ? ? ? ? ? ? ? 13.600 ? ? ? ? ? ? ? 9 1 ? ? 2.930 3.020 ? ? ? ? ? ? ? 99.300 ? ? ? ? 0.186 ? ? ? ? ? ? ? ? 13.700 ? ? ? ? ? ? ? 10 1 ? ? 3.020 3.130 ? ? ? ? ? ? ? 99.600 ? ? ? ? 0.170 ? ? ? ? ? ? ? ? 13.700 ? ? ? ? ? ? ? 11 1 ? ? 3.130 3.260 ? ? ? ? ? ? ? 99.600 ? ? ? ? 0.135 ? ? ? ? ? ? ? ? 13.600 ? ? ? ? ? ? ? 12 1 ? ? 3.260 3.410 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 13.600 ? ? ? ? ? ? ? 13 1 ? ? 3.410 3.580 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.087 ? ? ? ? ? ? ? ? 13.500 ? ? ? ? ? ? ? 14 1 ? ? 3.580 3.810 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 13.600 ? ? ? ? ? ? ? 15 1 ? ? 3.810 4.100 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 13.300 ? ? ? ? ? ? ? 16 1 ? ? 4.100 4.520 ? ? ? ? ? ? ? 99.600 ? ? ? ? 0.050 ? ? ? ? ? ? ? ? 13.500 ? ? ? ? ? ? ? 17 1 ? ? 4.520 5.170 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.049 ? ? ? ? ? ? ? ? 13.200 ? ? ? ? ? ? ? 18 1 ? ? 5.170 6.510 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.052 ? ? ? ? ? ? ? ? 13.000 ? ? ? ? ? ? ? 19 1 ? ? 6.510 50.000 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.032 ? ? ? ? ? ? ? ? 12.000 ? ? ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] -0.1200 _refine.aniso_B[1][2] -0.1200 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.1200 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.3800 _refine.B_iso_max 87.370 _refine.B_iso_mean 34.3460 _refine.B_iso_min 11.630 _refine.correlation_coeff_Fo_to_Fc 0.9470 _refine.correlation_coeff_Fo_to_Fc_free 0.9050 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GJ2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4000 _refine.ls_d_res_low 48.4000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8719 _refine.ls_number_reflns_R_free 447 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.0900 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1892 _refine.ls_R_factor_R_free 0.2553 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1857 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5GJ3 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.7290 _refine.pdbx_overall_ESU_R_Free 0.2990 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.6360 _refine.overall_SU_ML 0.2050 _refine.overall_SU_R_Cruickshank_DPI 0.7289 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.4000 _refine_hist.d_res_low 48.4000 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 1986 _refine_hist.pdbx_number_residues_total 263 _refine_hist.pdbx_B_iso_mean_ligand 47.64 _refine_hist.pdbx_B_iso_mean_solvent 34.19 _refine_hist.pdbx_number_atoms_protein 1939 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 1969 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.313 2.000 2685 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.374 5.000 262 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.384 24.103 78 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.279 15.000 314 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 21.423 15.000 17 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.081 0.200 321 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.022 1494 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4040 _refine_ls_shell.d_res_low 2.4660 _refine_ls_shell.number_reflns_all 626 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_R_work 591 _refine_ls_shell.percent_reflns_obs 92.0600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4150 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2300 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5GJ2 _struct.title 'Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in apo form' _struct.pdbx_descriptor 'Periplasmic binding protein' _struct.pdbx_model_details 'Periplasmic heme-binding protein RhuT in ABC heme transporter system' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GJ2 _struct_keywords.text 'metal transport, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? LEU A 22 ? ASN A 102 LEU A 112 1 ? 11 HELX_P HELX_P2 AA2 MET A 24 ? GLU A 26 ? MET A 114 GLU A 116 5 ? 3 HELX_P HELX_P3 AA3 PRO A 38 ? LYS A 43 ? PRO A 128 LYS A 133 1 ? 6 HELX_P HELX_P4 AA4 SER A 55 ? SER A 61 ? SER A 145 SER A 151 1 ? 7 HELX_P HELX_P5 AA5 PRO A 75 ? ALA A 85 ? PRO A 165 ALA A 175 1 ? 11 HELX_P HELX_P6 AA6 ASP A 99 ? LEU A 112 ? ASP A 189 LEU A 202 1 ? 14 HELX_P HELX_P7 AA7 ILE A 114 ? ALA A 136 ? ILE A 204 ALA A 226 1 ? 23 HELX_P HELX_P8 AA8 ARG A 137 ? ILE A 139 ? ARG A 227 ILE A 229 5 ? 3 HELX_P HELX_P9 AA9 THR A 163 ? ALA A 172 ? THR A 253 ALA A 262 1 ? 10 HELX_P HELX_P10 AB1 ALA A 177 ? ALA A 181 ? ALA A 267 ALA A 271 1 ? 5 HELX_P HELX_P11 AB2 SER A 190 ? GLN A 198 ? SER A 280 GLN A 288 1 ? 9 HELX_P HELX_P12 AB3 ASP A 206 ? VAL A 212 ? ASP A 296 VAL A 302 1 ? 7 HELX_P HELX_P13 AB4 GLY A 213 ? LEU A 219 ? GLY A 303 LEU A 309 1 ? 7 HELX_P HELX_P14 AB5 THR A 227 ? GLN A 232 ? THR A 317 GLN A 322 1 ? 6 HELX_P HELX_P15 AB6 ASP A 239 ? GLY A 245 ? ASP A 329 GLY A 335 1 ? 7 HELX_P HELX_P16 AB7 ARG A 249 ? GLN A 266 ? ARG A 339 GLN A 356 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 14 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 104 A MG 401 1_555 ? ? ? ? ? ? ? 2.940 ? metalc2 metalc ? ? A ASP 14 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 104 A MG 401 1_555 ? ? ? ? ? ? ? 2.337 ? metalc3 metalc ? ? A ASP 70 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 160 A MG 401 1_555 ? ? ? ? ? ? ? 2.237 ? metalc4 metalc ? ? A ASP 94 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 184 A MG 401 1_555 ? ? ? ? ? ? ? 2.047 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 401 A HOH 515 1_555 ? ? ? ? ? ? ? 2.200 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 37 A . ? TYR 127 A PRO 38 A ? PRO 128 A 1 -0.20 2 GLY 74 A . ? GLY 164 A PRO 75 A ? PRO 165 A 1 4.50 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 28 ? GLY A 30 ? VAL A 118 GLY A 120 AA1 2 ILE A 8 ? SER A 10 ? ILE A 98 SER A 100 AA1 3 LEU A 66 ? ASP A 70 ? LEU A 156 ASP A 160 AA1 4 LEU A 89 ? THR A 92 ? LEU A 179 THR A 182 AA2 1 ILE A 175 ? ASN A 176 ? ILE A 265 ASN A 266 AA2 2 HIS A 144 ? ARG A 151 ? HIS A 234 ARG A 241 AA2 3 VAL A 155 ? ALA A 159 ? VAL A 245 ALA A 249 AA2 4 PHE A 186 ? PRO A 188 ? PHE A 276 PRO A 278 AA3 1 ILE A 175 ? ASN A 176 ? ILE A 265 ASN A 266 AA3 2 HIS A 144 ? ARG A 151 ? HIS A 234 ARG A 241 AA3 3 VAL A 201 ? LEU A 205 ? VAL A 291 LEU A 295 AA3 4 ILE A 235 ? LEU A 238 ? ILE A 325 LEU A 328 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 29 ? O VAL A 119 N ILE A 8 ? N ILE A 98 AA1 2 3 N VAL A 9 ? N VAL A 99 O LEU A 66 ? O LEU A 156 AA1 3 4 N VAL A 67 ? N VAL A 157 O ALA A 90 ? O ALA A 180 AA2 1 2 O ILE A 175 ? O ILE A 265 N VAL A 145 ? N VAL A 235 AA2 2 3 N TYR A 149 ? N TYR A 239 O GLN A 157 ? O GLN A 247 AA2 3 4 N VAL A 158 ? N VAL A 248 O LYS A 187 ? O LYS A 277 AA3 1 2 O ILE A 175 ? O ILE A 265 N VAL A 145 ? N VAL A 235 AA3 2 3 N LEU A 146 ? N LEU A 236 O LEU A 203 ? O LEU A 293 AA3 3 4 N LEU A 202 ? N LEU A 292 O ILE A 236 ? O ILE A 326 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue MG A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 14 ? ASP A 104 . ? 1_555 ? 2 AC1 4 ASP A 70 ? ASP A 160 . ? 1_555 ? 3 AC1 4 ASP A 94 ? ASP A 184 . ? 1_555 ? 4 AC1 4 HOH C . ? HOH A 515 . ? 1_555 ? # _atom_sites.entry_id 5GJ2 _atom_sites.fract_transf_matrix[1][1] 0.014077 _atom_sites.fract_transf_matrix[1][2] 0.008127 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016254 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012787 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 91 ? ? ? A . n A 1 2 PRO 2 92 ? ? ? A . n A 1 3 LEU 3 93 ? ? ? A . n A 1 4 GLY 4 94 94 GLY GLY A . n A 1 5 SER 5 95 95 SER SER A . n A 1 6 GLU 6 96 96 GLU GLU A . n A 1 7 ARG 7 97 97 ARG ARG A . n A 1 8 ILE 8 98 98 ILE ILE A . n A 1 9 VAL 9 99 99 VAL VAL A . n A 1 10 SER 10 100 100 SER SER A . n A 1 11 LEU 11 101 101 LEU LEU A . n A 1 12 ASN 12 102 102 ASN ASN A . n A 1 13 GLY 13 103 103 GLY GLY A . n A 1 14 ASP 14 104 104 ASP ASP A . n A 1 15 ILE 15 105 105 ILE ILE A . n A 1 16 THR 16 106 106 THR THR A . n A 1 17 GLU 17 107 107 GLU GLU A . n A 1 18 ILE 18 108 108 ILE ILE A . n A 1 19 ILE 19 109 109 ILE ILE A . n A 1 20 PHE 20 110 110 PHE PHE A . n A 1 21 ALA 21 111 111 ALA ALA A . n A 1 22 LEU 22 112 112 LEU LEU A . n A 1 23 GLY 23 113 113 GLY GLY A . n A 1 24 MET 24 114 114 MET MET A . n A 1 25 GLY 25 115 115 GLY GLY A . n A 1 26 GLU 26 116 116 GLU GLU A . n A 1 27 TYR 27 117 117 TYR TYR A . n A 1 28 VAL 28 118 118 VAL VAL A . n A 1 29 VAL 29 119 119 VAL VAL A . n A 1 30 GLY 30 120 120 GLY GLY A . n A 1 31 VAL 31 121 121 VAL VAL A . n A 1 32 ASP 32 122 122 ASP ASP A . n A 1 33 SER 33 123 123 SER SER A . n A 1 34 SER 34 124 124 SER SER A . n A 1 35 ALA 35 125 125 ALA ALA A . n A 1 36 THR 36 126 126 THR THR A . n A 1 37 TYR 37 127 127 TYR TYR A . n A 1 38 PRO 38 128 128 PRO PRO A . n A 1 39 PRO 39 129 129 PRO PRO A . n A 1 40 GLU 40 130 130 GLU GLU A . n A 1 41 ARG 41 131 131 ARG ARG A . n A 1 42 THR 42 132 132 THR THR A . n A 1 43 LYS 43 133 133 LYS LYS A . n A 1 44 MET 44 134 134 MET MET A . n A 1 45 LEU 45 135 135 LEU LEU A . n A 1 46 PRO 46 136 136 PRO PRO A . n A 1 47 ASN 47 137 137 ASN ASN A . n A 1 48 ILE 48 138 138 ILE ILE A . n A 1 49 GLY 49 139 139 GLY GLY A . n A 1 50 TYR 50 140 140 TYR TYR A . n A 1 51 GLN 51 141 141 GLN GLN A . n A 1 52 ARG 52 142 142 ARG ARG A . n A 1 53 ARG 53 143 143 ARG ARG A . n A 1 54 LEU 54 144 144 LEU LEU A . n A 1 55 SER 55 145 145 SER SER A . n A 1 56 ALA 56 146 146 ALA ALA A . n A 1 57 GLU 57 147 147 GLU GLU A . n A 1 58 GLY 58 148 148 GLY GLY A . n A 1 59 ILE 59 149 149 ILE ILE A . n A 1 60 LEU 60 150 150 LEU LEU A . n A 1 61 SER 61 151 151 SER SER A . n A 1 62 LEU 62 152 152 LEU LEU A . n A 1 63 ASN 63 153 153 ASN ASN A . n A 1 64 PRO 64 154 154 PRO PRO A . n A 1 65 THR 65 155 155 THR THR A . n A 1 66 LEU 66 156 156 LEU LEU A . n A 1 67 VAL 67 157 157 VAL VAL A . n A 1 68 ILE 68 158 158 ILE ILE A . n A 1 69 GLY 69 159 159 GLY GLY A . n A 1 70 ASP 70 160 160 ASP ASP A . n A 1 71 GLU 71 161 161 GLU GLU A . n A 1 72 ALA 72 162 162 ALA ALA A . n A 1 73 ALA 73 163 163 ALA ALA A . n A 1 74 GLY 74 164 164 GLY GLY A . n A 1 75 PRO 75 165 165 PRO PRO A . n A 1 76 PRO 76 166 166 PRO PRO A . n A 1 77 GLU 77 167 167 GLU GLU A . n A 1 78 THR 78 168 168 THR THR A . n A 1 79 LEU 79 169 169 LEU LEU A . n A 1 80 ALA 80 170 170 ALA ALA A . n A 1 81 GLN 81 171 171 GLN GLN A . n A 1 82 ILE 82 172 172 ILE ILE A . n A 1 83 ARG 83 173 173 ARG ARG A . n A 1 84 ALA 84 174 174 ALA ALA A . n A 1 85 ALA 85 175 175 ALA ALA A . n A 1 86 GLY 86 176 176 GLY GLY A . n A 1 87 VAL 87 177 177 VAL VAL A . n A 1 88 PRO 88 178 178 PRO PRO A . n A 1 89 LEU 89 179 179 LEU LEU A . n A 1 90 ALA 90 180 180 ALA ALA A . n A 1 91 ILE 91 181 181 ILE ILE A . n A 1 92 THR 92 182 182 THR THR A . n A 1 93 ALA 93 183 183 ALA ALA A . n A 1 94 ASP 94 184 184 ASP ASP A . n A 1 95 PRO 95 185 185 PRO PRO A . n A 1 96 PRO 96 186 186 PRO PRO A . n A 1 97 SER 97 187 187 SER SER A . n A 1 98 LEU 98 188 188 LEU LEU A . n A 1 99 ASP 99 189 189 ASP ASP A . n A 1 100 ALA 100 190 190 ALA ALA A . n A 1 101 PRO 101 191 191 PRO PRO A . n A 1 102 GLN 102 192 192 GLN GLN A . n A 1 103 GLN 103 193 193 GLN GLN A . n A 1 104 LYS 104 194 194 LYS LYS A . n A 1 105 ILE 105 195 195 ILE ILE A . n A 1 106 ARG 106 196 196 ARG ARG A . n A 1 107 PHE 107 197 197 PHE PHE A . n A 1 108 VAL 108 198 198 VAL VAL A . n A 1 109 ALA 109 199 199 ALA ALA A . n A 1 110 GLN 110 200 200 GLN GLN A . n A 1 111 ALA 111 201 201 ALA ALA A . n A 1 112 LEU 112 202 202 LEU LEU A . n A 1 113 GLY 113 203 203 GLY GLY A . n A 1 114 ILE 114 204 204 ILE ILE A . n A 1 115 PRO 115 205 205 PRO PRO A . n A 1 116 GLN 116 206 206 GLN GLN A . n A 1 117 ARG 117 207 207 ARG ARG A . n A 1 118 GLY 118 208 208 GLY GLY A . n A 1 119 GLU 119 209 209 GLU GLU A . n A 1 120 ARG 120 210 210 ARG ARG A . n A 1 121 LEU 121 211 211 LEU LEU A . n A 1 122 ALA 122 212 212 ALA ALA A . n A 1 123 ALA 123 213 213 ALA ALA A . n A 1 124 GLN 124 214 214 GLN GLN A . n A 1 125 VAL 125 215 215 VAL VAL A . n A 1 126 GLU 126 216 216 GLU GLU A . n A 1 127 ALA 127 217 217 ALA ALA A . n A 1 128 GLU 128 218 218 GLU GLU A . n A 1 129 ILE 129 219 219 ILE ILE A . n A 1 130 ALA 130 220 220 ALA ALA A . n A 1 131 ALA 131 221 221 ALA ALA A . n A 1 132 ALA 132 222 222 ALA ALA A . n A 1 133 ARG 133 223 223 ARG ARG A . n A 1 134 ASP 134 224 224 ASP ASP A . n A 1 135 LEU 135 225 225 LEU LEU A . n A 1 136 ALA 136 226 226 ALA ALA A . n A 1 137 ARG 137 227 227 ARG ARG A . n A 1 138 ARG 138 228 228 ARG ARG A . n A 1 139 ILE 139 229 229 ILE ILE A . n A 1 140 THR 140 230 230 THR THR A . n A 1 141 ASN 141 231 231 ASN ASN A . n A 1 142 PRO 142 232 232 PRO PRO A . n A 1 143 PRO 143 233 233 PRO PRO A . n A 1 144 HIS 144 234 234 HIS HIS A . n A 1 145 VAL 145 235 235 VAL VAL A . n A 1 146 LEU 146 236 236 LEU LEU A . n A 1 147 PHE 147 237 237 PHE PHE A . n A 1 148 LEU 148 238 238 LEU LEU A . n A 1 149 TYR 149 239 239 TYR TYR A . n A 1 150 LEU 150 240 240 LEU LEU A . n A 1 151 ARG 151 241 241 ARG ARG A . n A 1 152 GLY 152 242 242 GLY GLY A . n A 1 153 THR 153 243 243 THR THR A . n A 1 154 ASP 154 244 244 ASP ASP A . n A 1 155 VAL 155 245 245 VAL VAL A . n A 1 156 GLN 156 246 246 GLN GLN A . n A 1 157 GLN 157 247 247 GLN GLN A . n A 1 158 VAL 158 248 248 VAL VAL A . n A 1 159 ALA 159 249 249 ALA ALA A . n A 1 160 GLY 160 250 250 GLY GLY A . n A 1 161 ARG 161 251 251 ARG ARG A . n A 1 162 ASN 162 252 252 ASN ASN A . n A 1 163 THR 163 253 253 THR THR A . n A 1 164 ALA 164 254 254 ALA ALA A . n A 1 165 VAL 165 255 255 VAL VAL A . n A 1 166 ASP 166 256 256 ASP ASP A . n A 1 167 VAL 167 257 257 VAL VAL A . n A 1 168 MET 168 258 258 MET MET A . n A 1 169 ILE 169 259 259 ILE ILE A . n A 1 170 ALA 170 260 260 ALA ALA A . n A 1 171 ALA 171 261 261 ALA ALA A . n A 1 172 ALA 172 262 262 ALA ALA A . n A 1 173 GLY 173 263 263 GLY GLY A . n A 1 174 GLY 174 264 264 GLY GLY A . n A 1 175 ILE 175 265 265 ILE ILE A . n A 1 176 ASN 176 266 266 ASN ASN A . n A 1 177 ALA 177 267 267 ALA ALA A . n A 1 178 ALA 178 268 268 ALA ALA A . n A 1 179 ALA 179 269 269 ALA ALA A . n A 1 180 ASP 180 270 270 ASP ASP A . n A 1 181 ALA 181 271 271 ALA ALA A . n A 1 182 GLY 182 272 272 GLY GLY A . n A 1 183 ILE 183 273 273 ILE ILE A . n A 1 184 VAL 184 274 274 VAL VAL A . n A 1 185 GLU 185 275 275 GLU GLU A . n A 1 186 PHE 186 276 276 PHE PHE A . n A 1 187 LYS 187 277 277 LYS LYS A . n A 1 188 PRO 188 278 278 PRO PRO A . n A 1 189 LEU 189 279 279 LEU LEU A . n A 1 190 SER 190 280 280 SER SER A . n A 1 191 PRO 191 281 281 PRO PRO A . n A 1 192 GLU 192 282 282 GLU GLU A . n A 1 193 VAL 193 283 283 VAL VAL A . n A 1 194 VAL 194 284 284 VAL VAL A . n A 1 195 ILE 195 285 285 ILE ILE A . n A 1 196 ALA 196 286 286 ALA ALA A . n A 1 197 ALA 197 287 287 ALA ALA A . n A 1 198 GLN 198 288 288 GLN GLN A . n A 1 199 PRO 199 289 289 PRO PRO A . n A 1 200 ASP 200 290 290 ASP ASP A . n A 1 201 VAL 201 291 291 VAL VAL A . n A 1 202 LEU 202 292 292 LEU LEU A . n A 1 203 LEU 203 293 293 LEU LEU A . n A 1 204 VAL 204 294 294 VAL VAL A . n A 1 205 LEU 205 295 295 LEU LEU A . n A 1 206 ASP 206 296 296 ASP ASP A . n A 1 207 LYS 207 297 297 LYS LYS A . n A 1 208 GLY 208 298 298 GLY GLY A . n A 1 209 LEU 209 299 299 LEU LEU A . n A 1 210 GLU 210 300 300 GLU GLU A . n A 1 211 SER 211 301 301 SER SER A . n A 1 212 VAL 212 302 302 VAL VAL A . n A 1 213 GLY 213 303 303 GLY GLY A . n A 1 214 GLY 214 304 304 GLY GLY A . n A 1 215 VAL 215 305 305 VAL VAL A . n A 1 216 ASP 216 306 306 ASP ASP A . n A 1 217 GLY 217 307 307 GLY GLY A . n A 1 218 LEU 218 308 308 LEU LEU A . n A 1 219 LEU 219 309 309 LEU LEU A . n A 1 220 LYS 220 310 310 LYS LYS A . n A 1 221 ILE 221 311 311 ILE ILE A . n A 1 222 PRO 222 312 312 PRO PRO A . n A 1 223 GLY 223 313 313 GLY GLY A . n A 1 224 LEU 224 314 314 LEU LEU A . n A 1 225 ALA 225 315 315 ALA ALA A . n A 1 226 ASP 226 316 316 ASP ASP A . n A 1 227 THR 227 317 317 THR THR A . n A 1 228 PRO 228 318 318 PRO PRO A . n A 1 229 ALA 229 319 319 ALA ALA A . n A 1 230 GLY 230 320 320 GLY GLY A . n A 1 231 ARG 231 321 321 ARG ARG A . n A 1 232 GLN 232 322 322 GLN GLN A . n A 1 233 ARG 233 323 323 ARG ARG A . n A 1 234 ARG 234 324 324 ARG ARG A . n A 1 235 ILE 235 325 325 ILE ILE A . n A 1 236 ILE 236 326 326 ILE ILE A . n A 1 237 ALA 237 327 327 ALA ALA A . n A 1 238 LEU 238 328 328 LEU LEU A . n A 1 239 ASP 239 329 329 ASP ASP A . n A 1 240 ASP 240 330 330 ASP ASP A . n A 1 241 LEU 241 331 331 LEU LEU A . n A 1 242 TYR 242 332 332 TYR TYR A . n A 1 243 LEU 243 333 333 LEU LEU A . n A 1 244 LEU 244 334 334 LEU LEU A . n A 1 245 GLY 245 335 335 GLY GLY A . n A 1 246 MET 246 336 336 MET MET A . n A 1 247 GLY 247 337 337 GLY GLY A . n A 1 248 PRO 248 338 338 PRO PRO A . n A 1 249 ARG 249 339 339 ARG ARG A . n A 1 250 THR 250 340 340 THR THR A . n A 1 251 GLY 251 341 341 GLY GLY A . n A 1 252 GLN 252 342 342 GLN GLN A . n A 1 253 ALA 253 343 343 ALA ALA A . n A 1 254 LEU 254 344 344 LEU LEU A . n A 1 255 THR 255 345 345 THR THR A . n A 1 256 ASP 256 346 346 ASP ASP A . n A 1 257 LEU 257 347 347 LEU LEU A . n A 1 258 THR 258 348 348 THR THR A . n A 1 259 ILE 259 349 349 ILE ILE A . n A 1 260 ALA 260 350 350 ALA ALA A . n A 1 261 PHE 261 351 351 PHE PHE A . n A 1 262 TYR 262 352 352 TYR TYR A . n A 1 263 ASP 263 353 353 ASP ASP A . n A 1 264 ALA 264 354 354 ALA ALA A . n A 1 265 ALA 265 355 355 ALA ALA A . n A 1 266 GLN 266 356 356 GLN GLN A . n A 1 267 GLY 267 357 ? ? ? A . n A 1 268 SER 268 358 ? ? ? A . n A 1 269 ARG 269 359 ? ? ? A . n A 1 270 PRO 270 360 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 401 361 MG MG A . C 3 HOH 1 501 401 HOH HOH A . C 3 HOH 2 502 411 HOH HOH A . C 3 HOH 3 503 441 HOH HOH A . C 3 HOH 4 504 409 HOH HOH A . C 3 HOH 5 505 442 HOH HOH A . C 3 HOH 6 506 403 HOH HOH A . C 3 HOH 7 507 415 HOH HOH A . C 3 HOH 8 508 439 HOH HOH A . C 3 HOH 9 509 428 HOH HOH A . C 3 HOH 10 510 421 HOH HOH A . C 3 HOH 11 511 416 HOH HOH A . C 3 HOH 12 512 420 HOH HOH A . C 3 HOH 13 513 406 HOH HOH A . C 3 HOH 14 514 426 HOH HOH A . C 3 HOH 15 515 424 HOH HOH A . C 3 HOH 16 516 408 HOH HOH A . C 3 HOH 17 517 434 HOH HOH A . C 3 HOH 18 518 418 HOH HOH A . C 3 HOH 19 519 431 HOH HOH A . C 3 HOH 20 520 404 HOH HOH A . C 3 HOH 21 521 446 HOH HOH A . C 3 HOH 22 522 427 HOH HOH A . C 3 HOH 23 523 417 HOH HOH A . C 3 HOH 24 524 433 HOH HOH A . C 3 HOH 25 525 438 HOH HOH A . C 3 HOH 26 526 430 HOH HOH A . C 3 HOH 27 527 410 HOH HOH A . C 3 HOH 28 528 405 HOH HOH A . C 3 HOH 29 529 435 HOH HOH A . C 3 HOH 30 530 440 HOH HOH A . C 3 HOH 31 531 412 HOH HOH A . C 3 HOH 32 532 437 HOH HOH A . C 3 HOH 33 533 432 HOH HOH A . C 3 HOH 34 534 425 HOH HOH A . C 3 HOH 35 535 414 HOH HOH A . C 3 HOH 36 536 419 HOH HOH A . C 3 HOH 37 537 413 HOH HOH A . C 3 HOH 38 538 436 HOH HOH A . C 3 HOH 39 539 422 HOH HOH A . C 3 HOH 40 540 402 HOH HOH A . C 3 HOH 41 541 443 HOH HOH A . C 3 HOH 42 542 429 HOH HOH A . C 3 HOH 43 543 423 HOH HOH A . C 3 HOH 44 544 445 HOH HOH A . C 3 HOH 45 545 444 HOH HOH A . C 3 HOH 46 546 407 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 110 ? 1 MORE -9 ? 1 'SSA (A^2)' 12120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 46.9 ? 2 OD1 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 76.9 ? 3 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 79.5 ? 4 OD1 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 132.5 ? 5 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 88.2 ? 6 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 81.0 ? 7 OD1 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? C HOH . ? A HOH 515 ? 1_555 81.6 ? 8 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? C HOH . ? A HOH 515 ? 1_555 127.1 ? 9 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? C HOH . ? A HOH 515 ? 1_555 77.9 ? 10 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? C HOH . ? A HOH 515 ? 1_555 133.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-28 2 'Structure model' 1 1 2017-10-11 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_PDB_obs_spr 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code' 2 2 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0029 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 275 ? ? 56.41 -144.54 2 1 GLN A 288 ? ? 37.60 56.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 91 ? A GLY 1 2 1 Y 1 A PRO 92 ? A PRO 2 3 1 Y 1 A LEU 93 ? A LEU 3 4 1 Y 1 A GLY 357 ? A GLY 267 5 1 Y 1 A SER 358 ? A SER 268 6 1 Y 1 A ARG 359 ? A ARG 269 7 1 Y 1 A PRO 360 ? A PRO 270 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal JSPS Japan JP24770110 1 JSPS Japan JP15H01655 2 JSPS Japan JP25121739 3 JSPS Japan JP23121531 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH #