HEADER HYDROLASE 07-JUL-16 5GKW TITLE CRYSTAL STRUCTURE OF SZ529 COMPLEX WITH (R,R)-CYCLOPENTANEDIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIMONENE-1,2-EPOXIDE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 2-149; COMPND 5 EC: 3.3.2.8; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS ERYTHROPOLIS; SOURCE 3 ORGANISM_TAXID: 1833; SOURCE 4 GENE: LIMA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET22B KEYWDS MUTANT R, R-SELECTIVITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.WU,Z.T.SUN,M.T.REETZ,J.H.ZHOU REVDAT 2 08-NOV-23 5GKW 1 REMARK REVDAT 1 12-JUL-17 5GKW 0 JRNL AUTH L.WU,Z.T.SUN,M.T.REETZ,J.H.ZHOU JRNL TITL CRYSTAL STRUCTURE OF SZ529 COMPLEX WITH JRNL TITL 2 (R,R)-CYCLOPENTANEDIOL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5691 - 4.1801 0.99 2861 165 0.1987 0.2276 REMARK 3 2 4.1801 - 3.3181 1.00 2756 140 0.2081 0.2520 REMARK 3 3 3.3181 - 2.8988 1.00 2720 145 0.2480 0.2923 REMARK 3 4 2.8988 - 2.6338 1.00 2727 128 0.2594 0.3046 REMARK 3 5 2.6338 - 2.4450 1.00 2712 111 0.2542 0.2742 REMARK 3 6 2.4450 - 2.3008 1.00 2693 138 0.2351 0.2677 REMARK 3 7 2.3008 - 2.1856 1.00 2671 145 0.2470 0.3185 REMARK 3 8 2.1856 - 2.0905 1.00 2639 136 0.2449 0.2511 REMARK 3 9 2.0905 - 2.0100 1.00 2673 140 0.2821 0.3336 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2063 REMARK 3 ANGLE : 1.343 2807 REMARK 3 CHIRALITY : 0.055 321 REMARK 3 PLANARITY : 0.008 363 REMARK 3 DIHEDRAL : 15.209 734 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -2.6343 81.2832 145.6554 REMARK 3 T TENSOR REMARK 3 T11: 0.7497 T22: 0.2798 REMARK 3 T33: 0.3114 T12: -0.0601 REMARK 3 T13: -0.0153 T23: 0.0782 REMARK 3 L TENSOR REMARK 3 L11: 1.1488 L22: 3.3341 REMARK 3 L33: 1.6889 L12: 0.2465 REMARK 3 L13: -0.0284 L23: -0.2376 REMARK 3 S TENSOR REMARK 3 S11: 0.2230 S12: -0.1671 S13: -0.2750 REMARK 3 S21: 1.4315 S22: -0.0445 S23: -0.0220 REMARK 3 S31: 0.0852 S32: -0.0849 S33: -0.0347 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GKW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1300000961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93911 REMARK 200 MONOCHROMATOR : SI III REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK 2.3.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26234 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : 0.11400 REMARK 200 FOR THE DATA SET : 12.3650 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.77200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9-1692 REMARK 200 STARTING MODEL: 5CF1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M SODIUM CITRATE, 0.1M HEPES PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 25.92800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.27050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.92800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.27050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 181.62300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 181.62300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 319 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 416 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 225 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 MET B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 ILE B 5 REMARK 465 ASP B 81 REMARK 465 ALA B 82 REMARK 465 ARG B 104 REMARK 465 ALA B 105 REMARK 465 LEU B 106 REMARK 465 PRO B 107 REMARK 465 THR B 108 REMARK 465 GLY B 109 REMARK 465 LYS B 110 REMARK 465 SER B 111 REMARK 465 TYR B 112 REMARK 465 ASN B 113 REMARK 465 PHE B 114 REMARK 465 PHE B 134 REMARK 465 ASP B 135 REMARK 465 LEU B 136 REMARK 465 ARG B 137 REMARK 465 GLU B 138 REMARK 465 PHE B 139 REMARK 465 GLU B 140 REMARK 465 GLU B 141 REMARK 465 ALA B 142 REMARK 465 VAL B 143 REMARK 465 ASP B 144 REMARK 465 LEU B 145 REMARK 465 PRO B 146 REMARK 465 LEU B 147 REMARK 465 ARG B 148 REMARK 465 GLY B 149 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 75 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 215 O HOH B 218 2.09 REMARK 500 O HOH A 393 O HOH A 398 2.15 REMARK 500 O HOH B 207 O HOH B 210 2.16 REMARK 500 O GLY B 73 OG1 THR B 76 2.17 REMARK 500 O THR B 85 O HOH B 201 2.19 REMARK 500 OE2 GLU B 25 OG SER B 90 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 25.12 -144.90 REMARK 500 ARG B 9 4.33 -61.71 REMARK 500 LYS B 13 -31.26 74.01 REMARK 500 ALA B 20 -73.88 -39.90 REMARK 500 SER B 21 8.02 83.99 REMARK 500 ASN B 38 9.26 58.61 REMARK 500 PRO B 57 34.20 -97.59 REMARK 500 LEU B 71 -70.58 -65.24 REMARK 500 VAL B 100 179.49 -57.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL B 100 ASP B 101 129.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 223 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B 224 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 225 DISTANCE = 9.18 ANGSTROMS REMARK 525 HOH B 226 DISTANCE = 9.76 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6VV A 201 DBREF 5GKW A 2 149 UNP Q9ZAG3 LIMA_RHOER 2 149 DBREF 5GKW B 2 149 UNP Q9ZAG3 LIMA_RHOER 2 149 SEQADV 5GKW MET A -5 UNP Q9ZAG3 INITIATING METHIONINE SEQADV 5GKW HIS A -4 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS A -3 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS A -2 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS A -1 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS A 0 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS A 1 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW VAL A 32 UNP Q9ZAG3 MET 32 ENGINEERED MUTATION SEQADV 5GKW VAL A 78 UNP Q9ZAG3 MET 78 ENGINEERED MUTATION SEQADV 5GKW VAL A 80 UNP Q9ZAG3 ILE 80 ENGINEERED MUTATION SEQADV 5GKW PHE A 114 UNP Q9ZAG3 LEU 114 ENGINEERED MUTATION SEQADV 5GKW MET B -5 UNP Q9ZAG3 INITIATING METHIONINE SEQADV 5GKW HIS B -4 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS B -3 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS B -2 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS B -1 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS B 0 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW HIS B 1 UNP Q9ZAG3 EXPRESSION TAG SEQADV 5GKW VAL B 32 UNP Q9ZAG3 MET 32 ENGINEERED MUTATION SEQADV 5GKW VAL B 78 UNP Q9ZAG3 MET 78 ENGINEERED MUTATION SEQADV 5GKW VAL B 80 UNP Q9ZAG3 ILE 80 ENGINEERED MUTATION SEQADV 5GKW PHE B 114 UNP Q9ZAG3 LEU 114 ENGINEERED MUTATION SEQRES 1 A 155 MET HIS HIS HIS HIS HIS HIS THR SER LYS ILE GLU GLN SEQRES 2 A 155 PRO ARG TRP ALA SER LYS ASP SER ALA ALA GLY ALA ALA SEQRES 3 A 155 SER THR PRO ASP GLU LYS ILE VAL LEU GLU PHE VAL ASP SEQRES 4 A 155 ALA LEU THR SER ASN ASP ALA ALA LYS LEU ILE GLU TYR SEQRES 5 A 155 PHE ALA GLU ASP THR MET TYR GLN ASN MET PRO LEU PRO SEQRES 6 A 155 PRO ALA TYR GLY ARG ASP ALA VAL GLU GLN THR LEU ALA SEQRES 7 A 155 GLY LEU PHE THR VAL VAL SER VAL ASP ALA VAL GLU THR SEQRES 8 A 155 PHE HIS ILE GLY SER SER ASN GLY LEU VAL TYR THR GLU SEQRES 9 A 155 ARG VAL ASP VAL LEU ARG ALA LEU PRO THR GLY LYS SER SEQRES 10 A 155 TYR ASN PHE SER ILE LEU GLY VAL PHE GLN LEU THR GLU SEQRES 11 A 155 GLY LYS ILE THR GLY TRP ARG ASP TYR PHE ASP LEU ARG SEQRES 12 A 155 GLU PHE GLU GLU ALA VAL ASP LEU PRO LEU ARG GLY SEQRES 1 B 155 MET HIS HIS HIS HIS HIS HIS THR SER LYS ILE GLU GLN SEQRES 2 B 155 PRO ARG TRP ALA SER LYS ASP SER ALA ALA GLY ALA ALA SEQRES 3 B 155 SER THR PRO ASP GLU LYS ILE VAL LEU GLU PHE VAL ASP SEQRES 4 B 155 ALA LEU THR SER ASN ASP ALA ALA LYS LEU ILE GLU TYR SEQRES 5 B 155 PHE ALA GLU ASP THR MET TYR GLN ASN MET PRO LEU PRO SEQRES 6 B 155 PRO ALA TYR GLY ARG ASP ALA VAL GLU GLN THR LEU ALA SEQRES 7 B 155 GLY LEU PHE THR VAL VAL SER VAL ASP ALA VAL GLU THR SEQRES 8 B 155 PHE HIS ILE GLY SER SER ASN GLY LEU VAL TYR THR GLU SEQRES 9 B 155 ARG VAL ASP VAL LEU ARG ALA LEU PRO THR GLY LYS SER SEQRES 10 B 155 TYR ASN PHE SER ILE LEU GLY VAL PHE GLN LEU THR GLU SEQRES 11 B 155 GLY LYS ILE THR GLY TRP ARG ASP TYR PHE ASP LEU ARG SEQRES 12 B 155 GLU PHE GLU GLU ALA VAL ASP LEU PRO LEU ARG GLY HET 6VV A 201 7 HETNAM 6VV (1~{R},2~{R})-CYCLOPENTANE-1,2-DIOL FORMUL 3 6VV C5 H10 O2 FORMUL 4 HOH *144(H2 O) HELIX 1 AA1 SER A 12 ALA A 20 5 9 HELIX 2 AA2 THR A 22 ALA A 34 1 13 HELIX 3 AA3 LEU A 35 ASN A 38 5 4 HELIX 4 AA4 ASP A 39 ILE A 44 1 6 HELIX 5 AA5 GLU A 45 PHE A 47 5 3 HELIX 6 AA6 GLY A 63 VAL A 77 1 15 HELIX 7 AA7 GLU A 138 VAL A 143 1 6 HELIX 8 AA8 ALA B 16 ALA B 20 5 5 HELIX 9 AA9 THR B 22 LEU B 35 1 14 HELIX 10 AB1 THR B 36 ASN B 38 5 3 HELIX 11 AB2 ASP B 39 GLU B 45 1 7 HELIX 12 AB3 GLY B 63 VAL B 78 1 16 SHEET 1 AA1 6 ALA A 61 TYR A 62 0 SHEET 2 AA1 6 MET A 52 ASN A 55 -1 N TYR A 53 O ALA A 61 SHEET 3 AA1 6 LYS A 126 TYR A 133 1 O TRP A 130 N GLN A 54 SHEET 4 AA1 6 SER A 111 THR A 123 -1 N GLN A 121 O THR A 128 SHEET 5 AA1 6 LEU A 94 ALA A 105 -1 N VAL A 95 O PHE A 120 SHEET 6 AA1 6 VAL A 78 SER A 91 -1 N ALA A 82 O VAL A 102 SHEET 1 AA2 6 ALA B 61 TYR B 62 0 SHEET 2 AA2 6 PHE B 47 ASN B 55 -1 N TYR B 53 O ALA B 61 SHEET 3 AA2 6 LYS B 126 ASP B 132 1 O TRP B 130 N GLN B 54 SHEET 4 AA2 6 ILE B 116 THR B 123 -1 N GLN B 121 O THR B 128 SHEET 5 AA2 6 LEU B 94 ARG B 99 -1 N VAL B 95 O PHE B 120 SHEET 6 AA2 6 HIS B 87 SER B 91 -1 N HIS B 87 O GLU B 98 CISPEP 1 MET A 56 PRO A 57 0 -5.10 CISPEP 2 MET B 56 PRO B 57 0 -8.50 SITE 1 AC1 7 TYR A 53 ASN A 55 LEU A 74 ARG A 99 SITE 2 AC1 7 ASP A 101 ILE A 116 ASP A 132 CRYST1 51.856 60.541 119.272 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019284 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008384 0.00000