HEADER TRANSFERASE 13-JUL-16 5GMC TITLE METHYLATION AT POSITION 32 OF TRNA CATALYZED BY TRMJ ALTERS OXIDATIVE TITLE 2 STRESS RESPONSE IN PSEUDOMONAS AERUIGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA (CYTIDINE/URIDINE-2'-O-)-METHYLTRANSFERASE TRMJ; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 24-167; COMPND 5 SYNONYM: TRNA (CYTIDINE(32)/URIDINE(32)-2'-O)-METHYLTRANSFERASE,TRNA COMPND 6 CM32/UM32 METHYLTRANSFERASE; COMPND 7 EC: 2.1.1.200; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 STRAIN: B136-33; SOURCE 5 GENE: TRMJ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC-CH2 KEYWDS PSEUDOMONAS AERUGINOSA, TRNA METHYLTRANSFERASE, TRMJ, OXIDATIVE KEYWDS 2 STRESS, TRNA MODIFICATION, WOBBLE BASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.JAROENSUK,S.ATICHARTPONGKUL,Y.H.CHIONH,Y.H.WONG,C.W.LIEW,M.E.MCBEE, AUTHOR 2 N.THONGDEE,E.G.PRESTWICH,M.S.DEMOTT,S.MONGKOLSUK,P.C.DEDON,J.LESCAR, AUTHOR 3 M.FUANGTHONG REVDAT 3 08-NOV-23 5GMC 1 REMARK REVDAT 2 13-DEC-17 5GMC 1 JRNL REMARK SEQRES REVDAT 1 26-OCT-16 5GMC 0 JRNL AUTH J.JAROENSUK,S.ATICHARTPONGKUL,Y.H.CHIONH,Y.H.WONG,C.W.LIEW, JRNL AUTH 2 M.E.MCBEE,N.THONGDEE,E.G.PRESTWICH,M.S.DEMOTT,S.MONGKOLSUK, JRNL AUTH 3 P.C.DEDON,J.LESCAR,M.FUANGTHONG JRNL TITL METHYLATION AT POSITION 32 OF TRNA CATALYZED BY TRMJ ALTERS JRNL TITL 2 OXIDATIVE STRESS RESPONSE IN PSEUDOMONAS AERUGINOSA. JRNL REF NUCLEIC ACIDS RES. V. 44 10834 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27683218 JRNL DOI 10.1093/NAR/GKW870 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 75444 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3782 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.74 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.62 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5209 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2260 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4950 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.97 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 259 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5194 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 629 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.36610 REMARK 3 B22 (A**2) : 2.33920 REMARK 3 B33 (A**2) : 0.02690 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.93290 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.200 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.104 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.096 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.099 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.093 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5340 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7281 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1837 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 138 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 805 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5340 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 695 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6782 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.10 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.92 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GMC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1300001058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : TOROIDAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75444 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 24.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4CND REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS PH 6.5, AMMONIUM CHLORIDE, REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.52150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 ASN C -6 REMARK 465 LEU C -5 REMARK 465 TYR C -4 REMARK 465 PHE C -3 REMARK 465 GLN C -2 REMARK 465 ASN D -6 REMARK 465 LEU D -5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 85 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 219 O HOH D 303 1.21 REMARK 500 O HOH B 307 O HOH B 330 1.58 REMARK 500 NZ LYS C 167 O HOH C 201 1.60 REMARK 500 CE3 TRP B 88 O HOH B 208 1.70 REMARK 500 O HOH C 320 O HOH C 359 1.81 REMARK 500 NZ LYS C 167 O HOH C 202 1.87 REMARK 500 O GLU C 117 O HOH C 203 1.91 REMARK 500 NE1 TRP B 88 O HOH B 201 1.94 REMARK 500 OE1 GLU A 109 O HOH A 201 2.06 REMARK 500 O HOH C 332 O HOH C 347 2.08 REMARK 500 O HOH C 295 O HOH C 320 2.10 REMARK 500 CZ3 TRP B 88 O HOH B 208 2.12 REMARK 500 O HOH A 231 O HOH A 332 2.13 REMARK 500 O HOH C 258 O HOH C 355 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 51 CB SER A 51 OG -0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 31 -21.42 -146.06 REMARK 500 ALA A 50 46.62 -88.72 REMARK 500 ALA A 53 21.93 -140.65 REMARK 500 GLU A 117 -33.10 -39.84 REMARK 500 TYR A 118 -32.24 -142.32 REMARK 500 PHE A 141 69.02 -161.95 REMARK 500 SER B 31 -17.50 -142.92 REMARK 500 SER B 51 54.50 36.31 REMARK 500 ALA B 53 32.79 -94.36 REMARK 500 ILE B 86 -87.51 -126.09 REMARK 500 SER C 31 -18.13 -144.39 REMARK 500 ASP C 83 18.72 -143.15 REMARK 500 PRO C 87 99.67 -60.76 REMARK 500 SER D 31 -22.54 -144.28 REMARK 500 ALA D 50 47.89 -80.98 REMARK 500 ALA D 53 19.95 -142.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN C 27 10.95 REMARK 500 ASN D 27 10.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 335 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH D 336 DISTANCE = 6.63 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GM8 RELATED DB: PDB REMARK 900 RELATED ID: 5GMB RELATED DB: PDB DBREF1 5GMC A 1 167 UNP A0A072ZPM2_PSEAI DBREF2 5GMC A A0A072ZPM2 1 167 DBREF1 5GMC B 1 167 UNP A0A072ZPM2_PSEAI DBREF2 5GMC B A0A072ZPM2 1 167 DBREF1 5GMC C 1 167 UNP A0A072ZPM2_PSEAI DBREF2 5GMC C A0A072ZPM2 1 167 DBREF1 5GMC D 1 167 UNP A0A072ZPM2_PSEAI DBREF2 5GMC D A0A072ZPM2 1 167 SEQADV 5GMC ASN A -6 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC LEU A -5 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC TYR A -4 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC PHE A -3 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC GLN A -2 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC SER A -1 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC MET A 0 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC ASN B -6 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC LEU B -5 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC TYR B -4 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC PHE B -3 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC GLN B -2 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC SER B -1 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC MET B 0 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC ASN C -6 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC LEU C -5 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC TYR C -4 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC PHE C -3 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC GLN C -2 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC SER C -1 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC MET C 0 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC ASN D -6 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC LEU D -5 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC TYR D -4 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC PHE D -3 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC GLN D -2 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC SER D -1 UNP A0A072ZPM EXPRESSION TAG SEQADV 5GMC MET D 0 UNP A0A072ZPM EXPRESSION TAG SEQRES 1 A 174 ASN LEU TYR PHE GLN SER MET MET LEU ASP ARG ILE ARG SEQRES 2 A 174 VAL VAL LEU VAL ASN THR SER HIS PRO GLY ASN ILE GLY SEQRES 3 A 174 GLY ALA ALA ARG ALA MET LYS ASN MET GLY LEU SER GLN SEQRES 4 A 174 LEU VAL LEU VAL GLN PRO GLU SER PHE PRO HIS GLY ASP SEQRES 5 A 174 ALA VAL ALA ARG ALA SER GLY ALA THR ASP ILE LEU ASP SEQRES 6 A 174 ALA ALA ARG VAL VAL ASP THR LEU GLU GLU ALA LEU SER SEQRES 7 A 174 GLY CYS SER VAL VAL LEU GLY THR SER ALA ARG ASP ARG SEQRES 8 A 174 ARG ILE PRO TRP PRO LEU LEU ASP PRO ARG GLU CYS ALA SEQRES 9 A 174 THR THR CYS LEU GLU HIS LEU GLU ALA ASN GLY GLU VAL SEQRES 10 A 174 ALA LEU VAL PHE GLY ARG GLU TYR ALA GLY LEU THR ASN SEQRES 11 A 174 GLU GLU LEU GLN ARG CYS GLN PHE HIS VAL HIS ILE PRO SEQRES 12 A 174 SER ASP PRO GLU PHE GLY SER LEU ASN LEU ALA ALA ALA SEQRES 13 A 174 VAL GLN VAL LEU THR TYR GLU VAL ARG MET ALA TRP LEU SEQRES 14 A 174 ALA ALA GLN GLY LYS SEQRES 1 B 174 ASN LEU TYR PHE GLN SER MET MET LEU ASP ARG ILE ARG SEQRES 2 B 174 VAL VAL LEU VAL ASN THR SER HIS PRO GLY ASN ILE GLY SEQRES 3 B 174 GLY ALA ALA ARG ALA MET LYS ASN MET GLY LEU SER GLN SEQRES 4 B 174 LEU VAL LEU VAL GLN PRO GLU SER PHE PRO HIS GLY ASP SEQRES 5 B 174 ALA VAL ALA ARG ALA SER GLY ALA THR ASP ILE LEU ASP SEQRES 6 B 174 ALA ALA ARG VAL VAL ASP THR LEU GLU GLU ALA LEU SER SEQRES 7 B 174 GLY CYS SER VAL VAL LEU GLY THR SER ALA ARG ASP ARG SEQRES 8 B 174 ARG ILE PRO TRP PRO LEU LEU ASP PRO ARG GLU CYS ALA SEQRES 9 B 174 THR THR CYS LEU GLU HIS LEU GLU ALA ASN GLY GLU VAL SEQRES 10 B 174 ALA LEU VAL PHE GLY ARG GLU TYR ALA GLY LEU THR ASN SEQRES 11 B 174 GLU GLU LEU GLN ARG CYS GLN PHE HIS VAL HIS ILE PRO SEQRES 12 B 174 SER ASP PRO GLU PHE GLY SER LEU ASN LEU ALA ALA ALA SEQRES 13 B 174 VAL GLN VAL LEU THR TYR GLU VAL ARG MET ALA TRP LEU SEQRES 14 B 174 ALA ALA GLN GLY LYS SEQRES 1 C 174 ASN LEU TYR PHE GLN SER MET MET LEU ASP ARG ILE ARG SEQRES 2 C 174 VAL VAL LEU VAL ASN THR SER HIS PRO GLY ASN ILE GLY SEQRES 3 C 174 GLY ALA ALA ARG ALA MET LYS ASN MET GLY LEU SER GLN SEQRES 4 C 174 LEU VAL LEU VAL GLN PRO GLU SER PHE PRO HIS GLY ASP SEQRES 5 C 174 ALA VAL ALA ARG ALA SER GLY ALA THR ASP ILE LEU ASP SEQRES 6 C 174 ALA ALA ARG VAL VAL ASP THR LEU GLU GLU ALA LEU SER SEQRES 7 C 174 GLY CYS SER VAL VAL LEU GLY THR SER ALA ARG ASP ARG SEQRES 8 C 174 ARG ILE PRO TRP PRO LEU LEU ASP PRO ARG GLU CYS ALA SEQRES 9 C 174 THR THR CYS LEU GLU HIS LEU GLU ALA ASN GLY GLU VAL SEQRES 10 C 174 ALA LEU VAL PHE GLY ARG GLU TYR ALA GLY LEU THR ASN SEQRES 11 C 174 GLU GLU LEU GLN ARG CYS GLN PHE HIS VAL HIS ILE PRO SEQRES 12 C 174 SER ASP PRO GLU PHE GLY SER LEU ASN LEU ALA ALA ALA SEQRES 13 C 174 VAL GLN VAL LEU THR TYR GLU VAL ARG MET ALA TRP LEU SEQRES 14 C 174 ALA ALA GLN GLY LYS SEQRES 1 D 174 ASN LEU TYR PHE GLN SER MET MET LEU ASP ARG ILE ARG SEQRES 2 D 174 VAL VAL LEU VAL ASN THR SER HIS PRO GLY ASN ILE GLY SEQRES 3 D 174 GLY ALA ALA ARG ALA MET LYS ASN MET GLY LEU SER GLN SEQRES 4 D 174 LEU VAL LEU VAL GLN PRO GLU SER PHE PRO HIS GLY ASP SEQRES 5 D 174 ALA VAL ALA ARG ALA SER GLY ALA THR ASP ILE LEU ASP SEQRES 6 D 174 ALA ALA ARG VAL VAL ASP THR LEU GLU GLU ALA LEU SER SEQRES 7 D 174 GLY CYS SER VAL VAL LEU GLY THR SER ALA ARG ASP ARG SEQRES 8 D 174 ARG ILE PRO TRP PRO LEU LEU ASP PRO ARG GLU CYS ALA SEQRES 9 D 174 THR THR CYS LEU GLU HIS LEU GLU ALA ASN GLY GLU VAL SEQRES 10 D 174 ALA LEU VAL PHE GLY ARG GLU TYR ALA GLY LEU THR ASN SEQRES 11 D 174 GLU GLU LEU GLN ARG CYS GLN PHE HIS VAL HIS ILE PRO SEQRES 12 D 174 SER ASP PRO GLU PHE GLY SER LEU ASN LEU ALA ALA ALA SEQRES 13 D 174 VAL GLN VAL LEU THR TYR GLU VAL ARG MET ALA TRP LEU SEQRES 14 D 174 ALA ALA GLN GLY LYS FORMUL 5 HOH *629(H2 O) HELIX 1 AA1 ASN A -6 MET A 1 1 8 HELIX 2 AA2 HIS A 14 MET A 28 1 15 HELIX 3 AA3 HIS A 43 ALA A 50 1 8 HELIX 4 AA4 ALA A 53 ALA A 59 1 7 HELIX 5 AA5 THR A 65 SER A 71 1 7 HELIX 6 AA6 ASP A 92 ALA A 106 1 15 HELIX 7 AA7 THR A 122 GLN A 127 1 6 HELIX 8 AA8 ASN A 145 GLN A 165 1 21 HELIX 9 AA9 GLN B -2 ASP B 3 1 6 HELIX 10 AB1 HIS B 14 MET B 28 1 15 HELIX 11 AB2 HIS B 43 SER B 51 1 9 HELIX 12 AB3 ALA B 53 ALA B 59 1 7 HELIX 13 AB4 THR B 65 SER B 71 1 7 HELIX 14 AB5 ASP B 92 GLU B 105 1 14 HELIX 15 AB6 ALA B 106 GLY B 108 5 3 HELIX 16 AB7 THR B 122 GLN B 127 1 6 HELIX 17 AB8 ASN B 145 GLN B 165 1 21 HELIX 18 AB9 SER C -1 ASP C 3 5 5 HELIX 19 AC1 HIS C 14 MET C 28 1 15 HELIX 20 AC2 HIS C 43 ALA C 50 1 8 HELIX 21 AC3 ALA C 53 ALA C 60 1 8 HELIX 22 AC4 THR C 65 SER C 71 1 7 HELIX 23 AC5 ASP C 92 LEU C 104 1 13 HELIX 24 AC6 GLU C 105 GLY C 108 5 4 HELIX 25 AC7 THR C 122 GLN C 127 1 6 HELIX 26 AC8 ASN C 145 GLN C 165 1 21 HELIX 27 AC9 PHE D -3 ASP D 3 5 7 HELIX 28 AD1 HIS D 14 MET D 28 1 15 HELIX 29 AD2 HIS D 43 ALA D 50 1 8 HELIX 30 AD3 ALA D 53 ALA D 60 1 8 HELIX 31 AD4 THR D 65 SER D 71 1 7 HELIX 32 AD5 ASP D 92 ALA D 106 1 15 HELIX 33 AD6 THR D 122 GLN D 127 1 6 HELIX 34 AD7 ASN D 145 ALA D 164 1 20 SHEET 1 AA1 7 ARG A 61 VAL A 63 0 SHEET 2 AA1 7 GLN A 32 VAL A 36 1 N LEU A 35 O ARG A 61 SHEET 3 AA1 7 ILE A 5 VAL A 10 1 N VAL A 7 O GLN A 32 SHEET 4 AA1 7 VAL A 110 PHE A 114 1 O VAL A 110 N ARG A 6 SHEET 5 AA1 7 VAL A 75 THR A 79 1 N LEU A 77 O VAL A 113 SHEET 6 AA1 7 PHE A 131 VAL A 133 1 O VAL A 133 N GLY A 78 SHEET 7 AA1 7 LEU A 90 LEU A 91 1 N LEU A 91 O HIS A 132 SHEET 1 AA2 7 ARG B 61 VAL B 63 0 SHEET 2 AA2 7 GLN B 32 VAL B 36 1 N LEU B 35 O ARG B 61 SHEET 3 AA2 7 ILE B 5 VAL B 10 1 N VAL B 7 O GLN B 32 SHEET 4 AA2 7 VAL B 110 PHE B 114 1 O VAL B 110 N ARG B 6 SHEET 5 AA2 7 VAL B 75 THR B 79 1 N LEU B 77 O VAL B 113 SHEET 6 AA2 7 PHE B 131 VAL B 133 1 O VAL B 133 N GLY B 78 SHEET 7 AA2 7 LEU B 90 LEU B 91 1 N LEU B 91 O HIS B 132 SHEET 1 AA3 7 ARG C 61 VAL C 63 0 SHEET 2 AA3 7 GLN C 32 VAL C 36 1 N LEU C 35 O ARG C 61 SHEET 3 AA3 7 ILE C 5 VAL C 10 1 N LEU C 9 O VAL C 34 SHEET 4 AA3 7 VAL C 110 PHE C 114 1 O VAL C 110 N ARG C 6 SHEET 5 AA3 7 VAL C 75 THR C 79 1 N LEU C 77 O VAL C 113 SHEET 6 AA3 7 PHE C 131 VAL C 133 1 O VAL C 133 N GLY C 78 SHEET 7 AA3 7 LEU C 90 LEU C 91 1 N LEU C 91 O HIS C 132 SHEET 1 AA4 7 ARG D 61 VAL D 63 0 SHEET 2 AA4 7 GLN D 32 VAL D 36 1 N LEU D 35 O ARG D 61 SHEET 3 AA4 7 ILE D 5 VAL D 10 1 N VAL D 7 O GLN D 32 SHEET 4 AA4 7 VAL D 110 PHE D 114 1 O VAL D 110 N ARG D 6 SHEET 5 AA4 7 VAL D 75 THR D 79 1 N LEU D 77 O VAL D 113 SHEET 6 AA4 7 PHE D 131 VAL D 133 1 O VAL D 133 N GLY D 78 SHEET 7 AA4 7 LEU D 90 LEU D 91 1 N LEU D 91 O HIS D 132 CISPEP 1 PHE A 41 PRO A 42 0 0.92 CISPEP 2 ILE A 86 PRO A 87 0 4.40 CISPEP 3 PHE B 41 PRO B 42 0 -0.56 CISPEP 4 PHE C 41 PRO C 42 0 -1.80 CISPEP 5 PHE D 41 PRO D 42 0 -4.95 CRYST1 65.442 65.043 93.186 90.00 110.42 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015281 0.000000 0.005689 0.00000 SCALE2 0.000000 0.015374 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011451 0.00000