HEADER HYDROLASE 15-JUL-16 5GMS TITLE CRYSTAL STRUCTURE OF THE MUTANT S202W/I203F OF THE ESTERASE E40 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ESTERASE E40; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.-Z.ZHANG,P.-Y.LI REVDAT 3 08-NOV-23 5GMS 1 REMARK REVDAT 2 13-FEB-19 5GMS 1 JRNL REVDAT 1 19-JUL-17 5GMS 0 JRNL AUTH P.Y.LI,Y.ZHANG,B.B.XIE,Y.Q.ZHANG,J.HAO,Y.WANG,P.WANG,C.Y.LI, JRNL AUTH 2 Q.L.QIN,X.Y.ZHANG,H.N.SU,M.SHI,Y.Z.ZHANG,X.L.CHEN JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO THE IMPROVEMENT OF JRNL TITL 2 THE HALOTOLERANCE OF A MARINE MICROBIAL ESTERASE BY JRNL TITL 3 INCREASING INTRA- AND INTERDOMAIN HYDROPHOBIC INTERACTIONS. JRNL REF APPL. ENVIRON. MICROBIOL. V. 83 2017 JRNL REFN ESSN 1098-5336 JRNL PMID 28733281 JRNL DOI 10.1128/AEM.01286-17 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 67899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5708 - 4.9688 0.96 2676 156 0.1933 0.2047 REMARK 3 2 4.9688 - 3.9448 1.00 2660 172 0.1509 0.1553 REMARK 3 3 3.9448 - 3.4464 1.00 2658 144 0.1455 0.1632 REMARK 3 4 3.4464 - 3.1314 1.00 2652 135 0.1589 0.1623 REMARK 3 5 3.1314 - 2.9070 1.00 2639 142 0.1623 0.1996 REMARK 3 6 2.9070 - 2.7356 1.00 2616 137 0.1634 0.1653 REMARK 3 7 2.7356 - 2.5987 1.00 2641 133 0.1576 0.2125 REMARK 3 8 2.5987 - 2.4855 0.99 2611 132 0.1566 0.1644 REMARK 3 9 2.4855 - 2.3899 0.99 2602 129 0.1604 0.1722 REMARK 3 10 2.3899 - 2.3074 0.99 2592 146 0.1551 0.1789 REMARK 3 11 2.3074 - 2.2353 0.99 2589 125 0.1554 0.1790 REMARK 3 12 2.2353 - 2.1714 0.99 2608 143 0.1544 0.1805 REMARK 3 13 2.1714 - 2.1142 0.99 2567 153 0.1571 0.1775 REMARK 3 14 2.1142 - 2.0626 0.99 2563 140 0.1616 0.1835 REMARK 3 15 2.0626 - 2.0157 0.99 2583 123 0.1590 0.2053 REMARK 3 16 2.0157 - 1.9728 0.98 2569 130 0.1582 0.1707 REMARK 3 17 1.9728 - 1.9334 0.97 2528 146 0.1635 0.1624 REMARK 3 18 1.9334 - 1.8969 0.97 2522 142 0.1605 0.1852 REMARK 3 19 1.8969 - 1.8630 0.97 2511 138 0.1639 0.2058 REMARK 3 20 1.8630 - 1.8314 0.97 2521 144 0.1653 0.1975 REMARK 3 21 1.8314 - 1.8019 0.97 2513 132 0.1674 0.1730 REMARK 3 22 1.8019 - 1.7742 0.97 2512 136 0.1821 0.1993 REMARK 3 23 1.7742 - 1.7481 0.96 2512 131 0.1778 0.2054 REMARK 3 24 1.7481 - 1.7235 0.96 2528 119 0.1863 0.2538 REMARK 3 25 1.7235 - 1.7002 0.95 2492 106 0.1898 0.1858 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 46.15 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.73640 REMARK 3 B22 (A**2) : -3.92010 REMARK 3 B33 (A**2) : 5.65650 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4668 REMARK 3 ANGLE : 1.445 6370 REMARK 3 CHIRALITY : 0.092 706 REMARK 3 PLANARITY : 0.007 838 REMARK 3 DIHEDRAL : 13.876 1722 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -18.8437 16.5523 18.0881 REMARK 3 T TENSOR REMARK 3 T11: 0.0879 T22: 0.1278 REMARK 3 T33: 0.1107 T12: 0.0134 REMARK 3 T13: -0.0018 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 0.2861 L22: 0.3218 REMARK 3 L33: 0.3423 L12: 0.0347 REMARK 3 L13: 0.1679 L23: 0.0897 REMARK 3 S TENSOR REMARK 3 S11: -0.0147 S12: -0.0419 S13: 0.0486 REMARK 3 S21: -0.0004 S22: -0.0416 S23: 0.0530 REMARK 3 S31: -0.0269 S32: -0.1138 S33: 0.0548 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1300001081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 77.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: 4XVC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE (PH 7.0), 50% (V/V) REMARK 280 MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.03350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.03350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.05400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.42250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.05400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.42250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.03350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.05400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.42250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.03350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.05400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 72.42250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 32 O HOH A 301 1.77 REMARK 500 O HOH A 462 O HOH A 465 1.91 REMARK 500 O HOH A 523 O HOH A 529 1.91 REMARK 500 O HOH B 439 O HOH B 476 1.92 REMARK 500 O HOH A 308 O HOH A 428 1.99 REMARK 500 O HOH B 306 O HOH B 423 2.04 REMARK 500 O HOH A 302 O HOH A 492 2.05 REMARK 500 O HOH A 392 O HOH A 417 2.06 REMARK 500 O HOH B 301 O HOH B 411 2.06 REMARK 500 O HOH A 406 O HOH A 545 2.06 REMARK 500 O HOH A 532 O HOH A 542 2.07 REMARK 500 O HOH A 493 O HOH A 508 2.07 REMARK 500 O HOH B 480 O HOH B 530 2.08 REMARK 500 O HOH A 488 O HOH A 492 2.09 REMARK 500 O HOH A 458 O HOH A 525 2.14 REMARK 500 O HOH A 528 O HOH A 539 2.14 REMARK 500 O HOH B 487 O HOH B 528 2.14 REMARK 500 O HOH B 491 O HOH B 492 2.15 REMARK 500 O HOH B 465 O HOH B 518 2.15 REMARK 500 O HOH A 364 O HOH A 442 2.16 REMARK 500 O HOH B 484 O HOH B 515 2.17 REMARK 500 O HOH A 521 O HOH A 529 2.18 REMARK 500 O HOH B 450 O HOH B 480 2.18 REMARK 500 O HOH B 419 O HOH B 466 2.18 REMARK 500 O HOH A 340 O HOH A 522 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 520 O HOH A 520 3555 1.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU B 74 CA LEU B 74 C 0.206 REMARK 500 THR B 113 CA THR B 113 C 0.195 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 21 CB - CA - C ANGL. DEV. = -25.2 DEGREES REMARK 500 ARG B 22 N - CA - CB ANGL. DEV. = -26.1 DEGREES REMARK 500 ASP B 67 CA - C - O ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP B 67 CA - C - O ANGL. DEV. = 14.9 DEGREES REMARK 500 ASP B 67 CA - C - N ANGL. DEV. = -13.4 DEGREES REMARK 500 LEU B 74 C - N - CA ANGL. DEV. = 21.8 DEGREES REMARK 500 LEU B 74 C - N - CA ANGL. DEV. = 22.8 DEGREES REMARK 500 THR B 113 C - N - CA ANGL. DEV. = 21.7 DEGREES REMARK 500 THR B 113 C - N - CA ANGL. DEV. = 20.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 83 -177.69 -179.31 REMARK 500 PHE A 115 136.58 -35.80 REMARK 500 PRO A 116 30.29 -98.48 REMARK 500 SER A 145 -120.62 48.57 REMARK 500 ASP A 266 -2.44 69.82 REMARK 500 ALA B 2 144.22 -177.37 REMARK 500 LYS B 3 42.05 -79.42 REMARK 500 ARG B 22 139.53 -36.88 REMARK 500 SER B 83 -176.70 -178.97 REMARK 500 PHE B 115 137.10 -39.83 REMARK 500 PRO B 116 32.86 -99.33 REMARK 500 SER B 145 -125.22 58.11 REMARK 500 SER B 194 -36.93 -137.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GMR RELATED DB: PDB DBREF1 5GMS A 1 297 UNP A0A0F6WGE1_9BACT DBREF2 5GMS A A0A0F6WGE1 1 297 DBREF1 5GMS B 1 297 UNP A0A0F6WGE1_9BACT DBREF2 5GMS B A0A0F6WGE1 1 297 SEQADV 5GMS HIS A -15 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A -14 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A -13 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A -12 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A -11 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A -10 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER A -9 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER A -8 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS GLY A -7 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS LEU A -6 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS VAL A -5 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS PRO A -4 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS ARG A -3 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS GLY A -2 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER A -1 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS A 0 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS TRP A 202 UNP A0A0F6WGE SER 202 ENGINEERED MUTATION SEQADV 5GMS PHE A 203 UNP A0A0F6WGE ILE 203 ENGINEERED MUTATION SEQADV 5GMS HIS B -15 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B -14 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B -13 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B -12 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B -11 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B -10 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER B -9 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER B -8 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS GLY B -7 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS LEU B -6 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS VAL B -5 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS PRO B -4 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS ARG B -3 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS GLY B -2 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS SER B -1 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS HIS B 0 UNP A0A0F6WGE EXPRESSION TAG SEQADV 5GMS TRP B 202 UNP A0A0F6WGE SER 202 ENGINEERED MUTATION SEQADV 5GMS PHE B 203 UNP A0A0F6WGE ILE 203 ENGINEERED MUTATION SEQRES 1 A 313 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 313 GLY SER HIS MET ALA LYS SER PRO GLU LEU ASP ARG VAL SEQRES 3 A 313 ILE GLY MET ILE ARG GLU ARG ALA ALA THR PRO ARG LYS SEQRES 4 A 313 THR THR ASP ASP ASP ARG ARG LEU TYR GLU THR MET LEU SEQRES 5 A 313 GLY SER MET PRO LEU ASP ASP ASP ILE GLN THR GLU ARG SEQRES 6 A 313 LEU GLY VAL ASN GLY VAL PRO ALA GLU TRP ILE TYR ALA SEQRES 7 A 313 PRO GLY ALA ARG ASP ASP GLN VAL PHE LEU TYR LEU HIS SEQRES 8 A 313 GLY GLY GLY TYR VAL ILE GLY SER MET ARG THR HIS ARG SEQRES 9 A 313 VAL MET LEU SER HIS ILE ALA ARG ALA ALA GLY CYS ARG SEQRES 10 A 313 VAL LEU GLY LEU ASP TYR ARG LEU ALA PRO GLU THR PRO SEQRES 11 A 313 PHE PRO ALA PRO VAL GLU ASP THR VAL ALA ALA TYR ARG SEQRES 12 A 313 TRP LEU LEU ALA HIS GLY TYR ASP PRO SER ARG ILE ALA SEQRES 13 A 313 LEU GLY GLY ASP SER ALA GLY GLY GLY LEU VAL VAL ALA SEQRES 14 A 313 ALA LEU VAL ALA LEU ARG TYR ILE GLY GLU PRO LEU PRO SEQRES 15 A 313 ALA ALA GLY VAL CYS LEU SER PRO TRP ILE ASP MET GLU SEQRES 16 A 313 ALA THR GLY GLU SER PHE THR THR ASN ALA THR MET ASP SEQRES 17 A 313 PRO SER VAL ASN LYS GLU ARG VAL MET TRP PHE ALA ALA SEQRES 18 A 313 LEU TYR LEU GLY GLY LYS ASN PRO GLN ALA PRO LEU ALA SEQRES 19 A 313 SER PRO LEU TYR ALA ASP LEU GLN GLY LEU PRO PRO LEU SEQRES 20 A 313 LEU VAL GLN VAL GLY GLY ILE GLU THR LEU LEU ASP ASP SEQRES 21 A 313 ALA ARG ALA LEU THR THR ARG ALA LYS ALA ALA GLY VAL SEQRES 22 A 313 ASP ALA ASP LEU GLU VAL TRP ASP ASP MET PRO HIS VAL SEQRES 23 A 313 TRP GLN HIS PHE ALA PRO ILE LEU PRO GLU GLY LYS GLN SEQRES 24 A 313 ALA ILE ALA ARG ILE GLY GLU PHE LEU ARG LYS GLN ILE SEQRES 25 A 313 GLY SEQRES 1 B 313 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 313 GLY SER HIS MET ALA LYS SER PRO GLU LEU ASP ARG VAL SEQRES 3 B 313 ILE GLY MET ILE ARG GLU ARG ALA ALA THR PRO ARG LYS SEQRES 4 B 313 THR THR ASP ASP ASP ARG ARG LEU TYR GLU THR MET LEU SEQRES 5 B 313 GLY SER MET PRO LEU ASP ASP ASP ILE GLN THR GLU ARG SEQRES 6 B 313 LEU GLY VAL ASN GLY VAL PRO ALA GLU TRP ILE TYR ALA SEQRES 7 B 313 PRO GLY ALA ARG ASP ASP GLN VAL PHE LEU TYR LEU HIS SEQRES 8 B 313 GLY GLY GLY TYR VAL ILE GLY SER MET ARG THR HIS ARG SEQRES 9 B 313 VAL MET LEU SER HIS ILE ALA ARG ALA ALA GLY CYS ARG SEQRES 10 B 313 VAL LEU GLY LEU ASP TYR ARG LEU ALA PRO GLU THR PRO SEQRES 11 B 313 PHE PRO ALA PRO VAL GLU ASP THR VAL ALA ALA TYR ARG SEQRES 12 B 313 TRP LEU LEU ALA HIS GLY TYR ASP PRO SER ARG ILE ALA SEQRES 13 B 313 LEU GLY GLY ASP SER ALA GLY GLY GLY LEU VAL VAL ALA SEQRES 14 B 313 ALA LEU VAL ALA LEU ARG TYR ILE GLY GLU PRO LEU PRO SEQRES 15 B 313 ALA ALA GLY VAL CYS LEU SER PRO TRP ILE ASP MET GLU SEQRES 16 B 313 ALA THR GLY GLU SER PHE THR THR ASN ALA THR MET ASP SEQRES 17 B 313 PRO SER VAL ASN LYS GLU ARG VAL MET TRP PHE ALA ALA SEQRES 18 B 313 LEU TYR LEU GLY GLY LYS ASN PRO GLN ALA PRO LEU ALA SEQRES 19 B 313 SER PRO LEU TYR ALA ASP LEU GLN GLY LEU PRO PRO LEU SEQRES 20 B 313 LEU VAL GLN VAL GLY GLY ILE GLU THR LEU LEU ASP ASP SEQRES 21 B 313 ALA ARG ALA LEU THR THR ARG ALA LYS ALA ALA GLY VAL SEQRES 22 B 313 ASP ALA ASP LEU GLU VAL TRP ASP ASP MET PRO HIS VAL SEQRES 23 B 313 TRP GLN HIS PHE ALA PRO ILE LEU PRO GLU GLY LYS GLN SEQRES 24 B 313 ALA ILE ALA ARG ILE GLY GLU PHE LEU ARG LYS GLN ILE SEQRES 25 B 313 GLY FORMUL 3 HOH *482(H2 O) HELIX 1 AA1 SER A 4 ALA A 18 1 15 HELIX 2 AA2 THR A 24 GLY A 37 1 14 HELIX 3 AA3 SER A 83 GLY A 99 1 17 HELIX 4 AA4 PRO A 116 HIS A 132 1 17 HELIX 5 AA5 ASP A 135 SER A 137 5 3 HELIX 6 AA6 SER A 145 ILE A 161 1 17 HELIX 7 AA7 GLU A 183 ASN A 188 1 6 HELIX 8 AA8 ASN A 196 GLY A 209 1 14 HELIX 9 AA9 SER A 219 ALA A 223 5 5 HELIX 10 AB1 LEU A 241 ALA A 255 1 15 HELIX 11 AB2 VAL A 270 ILE A 277 5 8 HELIX 12 AB3 LEU A 278 GLY A 297 1 20 HELIX 13 AB4 SER B 4 THR B 20 1 17 HELIX 14 AB5 THR B 24 GLY B 37 1 14 HELIX 15 AB6 SER B 83 GLY B 99 1 17 HELIX 16 AB7 PRO B 116 HIS B 132 1 17 HELIX 17 AB8 ASP B 135 SER B 137 5 3 HELIX 18 AB9 SER B 145 ILE B 161 1 17 HELIX 19 AC1 GLU B 183 ASN B 188 1 6 HELIX 20 AC2 ASN B 196 GLY B 209 1 14 HELIX 21 AC3 SER B 219 ALA B 223 5 5 HELIX 22 AC4 LEU B 241 ALA B 255 1 15 HELIX 23 AC5 VAL B 270 ILE B 277 5 8 HELIX 24 AC6 LEU B 278 GLY B 297 1 20 SHEET 1 AA1 8 GLN A 46 VAL A 52 0 SHEET 2 AA1 8 VAL A 55 TYR A 61 -1 O TYR A 61 N GLN A 46 SHEET 3 AA1 8 CYS A 100 LEU A 105 -1 O GLY A 104 N GLU A 58 SHEET 4 AA1 8 ARG A 66 LEU A 74 1 N PHE A 71 O LEU A 103 SHEET 5 AA1 8 ILE A 139 ASP A 144 1 O GLY A 142 N LEU A 74 SHEET 6 AA1 8 ALA A 168 LEU A 172 1 O LEU A 172 N GLY A 143 SHEET 7 AA1 8 LEU A 231 GLY A 236 1 O LEU A 232 N CYS A 171 SHEET 8 AA1 8 ALA A 259 TRP A 264 1 O GLU A 262 N VAL A 233 SHEET 1 AA2 8 GLN B 46 VAL B 52 0 SHEET 2 AA2 8 VAL B 55 TYR B 61 -1 O TYR B 61 N GLN B 46 SHEET 3 AA2 8 CYS B 100 LEU B 105 -1 O GLY B 104 N GLU B 58 SHEET 4 AA2 8 ARG B 66 LEU B 74 1 N PHE B 71 O ARG B 101 SHEET 5 AA2 8 ILE B 139 ASP B 144 1 O ALA B 140 N LEU B 72 SHEET 6 AA2 8 ALA B 168 LEU B 172 1 O LEU B 172 N GLY B 143 SHEET 7 AA2 8 LEU B 231 GLY B 236 1 O LEU B 232 N CYS B 171 SHEET 8 AA2 8 ALA B 259 TRP B 264 1 O TRP B 264 N VAL B 235 CISPEP 1 ALA A 110 PRO A 111 0 3.37 CISPEP 2 PHE A 115 PRO A 116 0 3.65 CISPEP 3 ALA B 110 PRO B 111 0 5.25 CISPEP 4 PHE B 115 PRO B 116 0 4.24 CRYST1 90.108 144.845 96.067 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011098 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010409 0.00000