data_5GNB # _entry.id 5GNB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5GNB WWPDB D_1300001093 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GNB _pdbx_database_status.recvd_initial_deposition_date 2016-07-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guan, H.' 1 ? 'Wojdyla, J.A.' 2 ? 'Wang, M.' 3 ? 'Cui, S.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 15216 _citation.page_last 15216 _citation.title 'Crystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/ncomms15216 _citation.pdbx_database_id_PubMed 28534504 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ou, X.' 1 ? primary 'Guan, H.' 2 ? primary 'Qin, B.' 3 ? primary 'Mu, Z.' 4 ? primary 'Wojdyla, J.A.' 5 ? primary 'Wang, M.' 6 ? primary 'Dominguez, S.R.' 7 ? primary 'Qian, Z.' 8 ? primary 'Cui, S.' 9 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5GNB _cell.details ? _cell.formula_units_Z ? _cell.length_a 86.720 _cell.length_a_esd ? _cell.length_b 183.990 _cell.length_b_esd ? _cell.length_c 63.160 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike glycoprotein' 41425.062 1 ? ? 'UNP residues 307-677' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? 3 water nat water 18.015 234 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGFTVKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLVHTDSFSCNNFDESKIYGSCFKSI VLDKFAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLPAINVTINNYNPSSWNRRYGFNNFNLSSHSVVYSRYC FSVNNTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVLDHTDWCRCSCLPDPITAYDPRSCSQKKSLVGVGEHC AGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNIFSNFILNGINSGTTCSNDLLQPNTEVFTDVCVDYDL YGITGQGIFKEVSAVYYNSWQNLLYDSNGNIIGFKDFVTNKTYNIFPCYAG ; _entity_poly.pdbx_seq_one_letter_code_can ;SGFTVKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLVHTDSFSCNNFDESKIYGSCFKSI VLDKFAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLPAINVTINNYNPSSWNRRYGFNNFNLSSHSVVYSRYC FSVNNTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVLDHTDWCRCSCLPDPITAYDPRSCSQKKSLVGVGEHC AGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNIFSNFILNGINSGTTCSNDLLQPNTEVFTDVCVDYDL YGITGQGIFKEVSAVYYNSWQNLLYDSNGNIIGFKDFVTNKTYNIFPCYAG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 PHE n 1 4 THR n 1 5 VAL n 1 6 LYS n 1 7 PRO n 1 8 VAL n 1 9 ALA n 1 10 THR n 1 11 VAL n 1 12 HIS n 1 13 ARG n 1 14 ARG n 1 15 ILE n 1 16 PRO n 1 17 ASP n 1 18 LEU n 1 19 PRO n 1 20 ASP n 1 21 CYS n 1 22 ASP n 1 23 ILE n 1 24 ASP n 1 25 LYS n 1 26 TRP n 1 27 LEU n 1 28 ASN n 1 29 ASN n 1 30 PHE n 1 31 ASN n 1 32 VAL n 1 33 PRO n 1 34 SER n 1 35 PRO n 1 36 LEU n 1 37 ASN n 1 38 TRP n 1 39 GLU n 1 40 ARG n 1 41 LYS n 1 42 ILE n 1 43 PHE n 1 44 SER n 1 45 ASN n 1 46 CYS n 1 47 ASN n 1 48 PHE n 1 49 ASN n 1 50 LEU n 1 51 SER n 1 52 THR n 1 53 LEU n 1 54 LEU n 1 55 ARG n 1 56 LEU n 1 57 VAL n 1 58 HIS n 1 59 THR n 1 60 ASP n 1 61 SER n 1 62 PHE n 1 63 SER n 1 64 CYS n 1 65 ASN n 1 66 ASN n 1 67 PHE n 1 68 ASP n 1 69 GLU n 1 70 SER n 1 71 LYS n 1 72 ILE n 1 73 TYR n 1 74 GLY n 1 75 SER n 1 76 CYS n 1 77 PHE n 1 78 LYS n 1 79 SER n 1 80 ILE n 1 81 VAL n 1 82 LEU n 1 83 ASP n 1 84 LYS n 1 85 PHE n 1 86 ALA n 1 87 ILE n 1 88 PRO n 1 89 ASN n 1 90 SER n 1 91 ARG n 1 92 ARG n 1 93 SER n 1 94 ASP n 1 95 LEU n 1 96 GLN n 1 97 LEU n 1 98 GLY n 1 99 SER n 1 100 SER n 1 101 GLY n 1 102 PHE n 1 103 LEU n 1 104 GLN n 1 105 SER n 1 106 SER n 1 107 ASN n 1 108 TYR n 1 109 LYS n 1 110 ILE n 1 111 ASP n 1 112 THR n 1 113 THR n 1 114 SER n 1 115 SER n 1 116 SER n 1 117 CYS n 1 118 GLN n 1 119 LEU n 1 120 TYR n 1 121 TYR n 1 122 SER n 1 123 LEU n 1 124 PRO n 1 125 ALA n 1 126 ILE n 1 127 ASN n 1 128 VAL n 1 129 THR n 1 130 ILE n 1 131 ASN n 1 132 ASN n 1 133 TYR n 1 134 ASN n 1 135 PRO n 1 136 SER n 1 137 SER n 1 138 TRP n 1 139 ASN n 1 140 ARG n 1 141 ARG n 1 142 TYR n 1 143 GLY n 1 144 PHE n 1 145 ASN n 1 146 ASN n 1 147 PHE n 1 148 ASN n 1 149 LEU n 1 150 SER n 1 151 SER n 1 152 HIS n 1 153 SER n 1 154 VAL n 1 155 VAL n 1 156 TYR n 1 157 SER n 1 158 ARG n 1 159 TYR n 1 160 CYS n 1 161 PHE n 1 162 SER n 1 163 VAL n 1 164 ASN n 1 165 ASN n 1 166 THR n 1 167 PHE n 1 168 CYS n 1 169 PRO n 1 170 CYS n 1 171 ALA n 1 172 LYS n 1 173 PRO n 1 174 SER n 1 175 PHE n 1 176 ALA n 1 177 SER n 1 178 SER n 1 179 CYS n 1 180 LYS n 1 181 SER n 1 182 HIS n 1 183 LYS n 1 184 PRO n 1 185 PRO n 1 186 SER n 1 187 ALA n 1 188 SER n 1 189 CYS n 1 190 PRO n 1 191 ILE n 1 192 GLY n 1 193 THR n 1 194 ASN n 1 195 TYR n 1 196 ARG n 1 197 SER n 1 198 CYS n 1 199 GLU n 1 200 SER n 1 201 THR n 1 202 THR n 1 203 VAL n 1 204 LEU n 1 205 ASP n 1 206 HIS n 1 207 THR n 1 208 ASP n 1 209 TRP n 1 210 CYS n 1 211 ARG n 1 212 CYS n 1 213 SER n 1 214 CYS n 1 215 LEU n 1 216 PRO n 1 217 ASP n 1 218 PRO n 1 219 ILE n 1 220 THR n 1 221 ALA n 1 222 TYR n 1 223 ASP n 1 224 PRO n 1 225 ARG n 1 226 SER n 1 227 CYS n 1 228 SER n 1 229 GLN n 1 230 LYS n 1 231 LYS n 1 232 SER n 1 233 LEU n 1 234 VAL n 1 235 GLY n 1 236 VAL n 1 237 GLY n 1 238 GLU n 1 239 HIS n 1 240 CYS n 1 241 ALA n 1 242 GLY n 1 243 PHE n 1 244 GLY n 1 245 VAL n 1 246 ASP n 1 247 GLU n 1 248 GLU n 1 249 LYS n 1 250 CYS n 1 251 GLY n 1 252 VAL n 1 253 LEU n 1 254 ASP n 1 255 GLY n 1 256 SER n 1 257 TYR n 1 258 ASN n 1 259 VAL n 1 260 SER n 1 261 CYS n 1 262 LEU n 1 263 CYS n 1 264 SER n 1 265 THR n 1 266 ASP n 1 267 ALA n 1 268 PHE n 1 269 LEU n 1 270 GLY n 1 271 TRP n 1 272 SER n 1 273 TYR n 1 274 ASP n 1 275 THR n 1 276 CYS n 1 277 VAL n 1 278 SER n 1 279 ASN n 1 280 ASN n 1 281 ARG n 1 282 CYS n 1 283 ASN n 1 284 ILE n 1 285 PHE n 1 286 SER n 1 287 ASN n 1 288 PHE n 1 289 ILE n 1 290 LEU n 1 291 ASN n 1 292 GLY n 1 293 ILE n 1 294 ASN n 1 295 SER n 1 296 GLY n 1 297 THR n 1 298 THR n 1 299 CYS n 1 300 SER n 1 301 ASN n 1 302 ASP n 1 303 LEU n 1 304 LEU n 1 305 GLN n 1 306 PRO n 1 307 ASN n 1 308 THR n 1 309 GLU n 1 310 VAL n 1 311 PHE n 1 312 THR n 1 313 ASP n 1 314 VAL n 1 315 CYS n 1 316 VAL n 1 317 ASP n 1 318 TYR n 1 319 ASP n 1 320 LEU n 1 321 TYR n 1 322 GLY n 1 323 ILE n 1 324 THR n 1 325 GLY n 1 326 GLN n 1 327 GLY n 1 328 ILE n 1 329 PHE n 1 330 LYS n 1 331 GLU n 1 332 VAL n 1 333 SER n 1 334 ALA n 1 335 VAL n 1 336 TYR n 1 337 TYR n 1 338 ASN n 1 339 SER n 1 340 TRP n 1 341 GLN n 1 342 ASN n 1 343 LEU n 1 344 LEU n 1 345 TYR n 1 346 ASP n 1 347 SER n 1 348 ASN n 1 349 GLY n 1 350 ASN n 1 351 ILE n 1 352 ILE n 1 353 GLY n 1 354 PHE n 1 355 LYS n 1 356 ASP n 1 357 PHE n 1 358 VAL n 1 359 THR n 1 360 ASN n 1 361 LYS n 1 362 THR n 1 363 TYR n 1 364 ASN n 1 365 ILE n 1 366 PHE n 1 367 PRO n 1 368 CYS n 1 369 TYR n 1 370 ALA n 1 371 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 371 _entity_src_gen.gene_src_common_name HCoV-HKU1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'S, 3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'isolate N1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human coronavirus HKU1 (isolate N1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 443239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPIKE_CVHN1 _struct_ref.pdbx_db_accession Q5MQD0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGFTVKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLVHTDSFSCNNFDESKIYGSCFKSI VLDKFAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLPAINVTINNYNPSSWNRRYGFNNFNLSSHSVVYSRYC FSVNNTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVLDHTDWCRCSCLPDPITAYDPRSCSQKKSLVGVGEHC AGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNIFSNFILNGINSGTTCSNDLLQPNTEVFTDVCVDYDL YGITGQGIFKEVSAVYYNSWQNLLYDSNGNIIGFKDFVTNKTYNIFPCYAG ; _struct_ref.pdbx_align_begin 307 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GNB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 371 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5MQD0 _struct_ref_seq.db_align_beg 307 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 677 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 307 _struct_ref_seq.pdbx_auth_seq_align_end 677 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GNB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60 _exptl_crystal.description 'THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS.' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Tris, 24%PEG4000, 0.2M MgCl2, 4% v/v Pentaerythritol ethoxylate (3/4 EO/OH)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-05-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 2.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 2.08 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 31.062 _reflns.entry_id 5GNB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 49.2 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 43316 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 89.76 _reflns.pdbx_Rmerge_I_obs 0.23 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 28.04 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.36 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.37 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 93.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.28 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 30.92 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.894 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 30.16 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS COLUMNS.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GNB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 49.2 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 43282 _refine.ls_number_reflns_R_free 2155 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.43 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1751 _refine.ls_R_factor_R_free 0.2192 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1728 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.93 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.97 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.26 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2853 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 234 _refine_hist.number_atoms_total 3143 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 49.2 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 3070 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.854 ? 4213 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 9.968 ? 1859 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.051 ? 468 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 546 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2980 2.3515 . . 137 2595 93.00 . . . 0.3032 . 0.2349 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3515 2.4103 . . 140 2720 99.00 . . . 0.2566 . 0.2176 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4103 2.4754 . . 145 2765 100.00 . . . 0.2384 . 0.2056 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4754 2.5483 . . 141 2762 100.00 . . . 0.2889 . 0.1864 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5483 2.6305 . . 140 2734 100.00 . . . 0.2993 . 0.1831 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6305 2.7245 . . 148 2760 100.00 . . . 0.2113 . 0.1706 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7245 2.8336 . . 147 2745 100.00 . . . 0.2223 . 0.1732 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8336 2.9625 . . 144 2731 100.00 . . . 0.2372 . 0.1848 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9625 3.1187 . . 144 2764 100.00 . . . 0.2384 . 0.1914 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1187 3.3141 . . 143 2762 100.00 . . . 0.2323 . 0.1747 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3141 3.5699 . . 147 2755 100.00 . . . 0.1869 . 0.1637 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5699 3.9290 . . 148 2774 100.00 . . . 0.2077 . 0.1545 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9290 4.4972 . . 142 2741 100.00 . . . 0.2086 . 0.1340 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4972 5.6647 . . 143 2769 100.00 . . . 0.1463 . 0.1508 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.6647 49.2067 . . 146 2750 100.00 . . . 0.2302 . 0.1947 . . . . . . . . . . # _struct.entry_id 5GNB _struct.title ;Crystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus HKU1 (HKU1 1A-CTD, 2.3 angstrom, native-SAD phasing) ; _struct.pdbx_descriptor 'Spike glycoprotein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GNB _struct_keywords.text 'Coronavirus spike protein, S1-CTD, receptor binding domain, receptor binding motif, virus entry, HKU1, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? ASN A 28 ? ASP A 328 ASN A 334 1 ? 7 HELX_P HELX_P2 AA2 PRO A 35 ? TRP A 38 ? PRO A 341 TRP A 344 5 ? 4 HELX_P HELX_P3 AA3 ASN A 49 ? VAL A 57 ? ASN A 355 VAL A 363 1 ? 9 HELX_P HELX_P4 AA4 ASP A 68 ? ILE A 72 ? ASP A 374 ILE A 378 5 ? 5 HELX_P HELX_P5 AA5 PRO A 88 ? GLN A 96 ? PRO A 394 GLN A 402 5 ? 9 HELX_P HELX_P6 AA6 GLY A 101 ? ASN A 107 ? GLY A 407 ASN A 413 1 ? 7 HELX_P HELX_P7 AA7 ILE A 126 ? VAL A 128 ? ILE A 432 VAL A 434 5 ? 3 HELX_P HELX_P8 AA8 SER A 136 ? TYR A 142 ? SER A 442 TYR A 448 1 ? 7 HELX_P HELX_P9 AA9 LYS A 172 ? SER A 177 ? LYS A 478 SER A 483 1 ? 6 HELX_P HELX_P10 AB1 ASP A 223 ? CYS A 227 ? ASP A 529 CYS A 533 5 ? 5 HELX_P HELX_P11 AB2 ASP A 246 ? CYS A 250 ? ASP A 552 CYS A 556 5 ? 5 HELX_P HELX_P12 AB3 SER A 264 ? PHE A 268 ? SER A 570 PHE A 574 5 ? 5 HELX_P HELX_P13 AB4 SER A 333 ? TYR A 337 ? SER A 639 TYR A 643 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 327 A CYS 352 1_555 ? ? ? ? ? ? ? 2.064 ? ? disulf2 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 117 SG A ? A CYS 370 A CYS 423 1_555 ? ? ? ? ? ? ? 2.050 ? ? disulf3 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 299 SG A ? A CYS 382 A CYS 605 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf4 disulf ? ? A CYS 160 SG A ? ? 1_555 A CYS 240 SG ? ? A CYS 466 A CYS 546 1_555 ? ? ? ? ? ? ? 2.054 ? ? disulf5 disulf ? ? A CYS 168 SG ? ? ? 1_555 A CYS 189 SG ? ? A CYS 474 A CYS 495 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf6 disulf ? ? A CYS 170 SG ? ? ? 1_555 A CYS 261 SG ? ? A CYS 476 A CYS 567 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf7 disulf ? ? A CYS 179 SG ? ? ? 1_555 A CYS 210 SG ? ? A CYS 485 A CYS 516 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf8 disulf ? ? A CYS 198 SG ? ? ? 1_555 A CYS 212 SG ? ? A CYS 504 A CYS 518 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf9 disulf ? ? A CYS 214 SG A ? ? 1_555 A CYS 227 SG ? ? A CYS 520 A CYS 533 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf10 disulf ? ? A CYS 250 SG ? ? ? 1_555 A CYS 263 SG ? ? A CYS 556 A CYS 569 1_555 ? ? ? ? ? ? ? 2.071 ? ? disulf11 disulf ? ? A CYS 276 SG ? ? ? 1_555 A CYS 282 SG B ? A CYS 582 A CYS 588 1_555 ? ? ? ? ? ? ? 2.068 ? ? disulf12 disulf ? ? A CYS 315 SG ? ? ? 1_555 A CYS 368 SG ? ? A CYS 621 A CYS 674 1_555 ? ? ? ? ? ? ? 2.037 ? ? covale1 covale one ? A ASN 49 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 355 A NAG 704 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 127 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 433 A NAG 701 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale3 covale one ? A ASN 148 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 454 A NAG 703 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale4 covale one ? A ASN 164 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 470 A NAG 702 1_555 ? ? ? ? ? ? ? 1.455 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 215 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 521 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 216 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 522 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.90 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 5 ? AA4 ? 4 ? AA5 ? 3 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 11 ? ARG A 13 ? VAL A 317 ARG A 319 AA1 2 CYS A 315 ? LEU A 320 ? CYS A 621 LEU A 626 AA1 3 ILE A 323 ? VAL A 332 ? ILE A 629 VAL A 638 AA1 4 THR A 362 ? PHE A 366 ? THR A 668 PHE A 672 AA1 5 ILE A 351 ? LYS A 355 ? ILE A 657 LYS A 661 AA1 6 LEU A 343 ? TYR A 345 ? LEU A 649 TYR A 651 AA2 1 ASN A 31 ? PRO A 33 ? ASN A 337 PRO A 339 AA2 2 THR A 129 ? ASN A 131 ? THR A 435 ASN A 437 AA3 1 GLU A 39 ? PHE A 43 ? GLU A 345 PHE A 349 AA3 2 SER A 79 ? ALA A 86 ? SER A 385 ALA A 392 AA3 3 ARG A 281 ? ASN A 291 ? ARG A 587 ASN A 597 AA3 4 SER A 116 ? PRO A 124 ? SER A 422 PRO A 430 AA3 5 HIS A 58 ? ASN A 65 ? HIS A 364 ASN A 371 AA4 1 GLU A 39 ? PHE A 43 ? GLU A 345 PHE A 349 AA4 2 SER A 79 ? ALA A 86 ? SER A 385 ALA A 392 AA4 3 ARG A 281 ? ASN A 291 ? ARG A 587 ASN A 597 AA4 4 VAL A 277 ? SER A 278 ? VAL A 583 SER A 584 AA5 1 CYS A 46 ? PHE A 48 ? CYS A 352 PHE A 354 AA5 2 THR A 298 ? SER A 300 ? THR A 604 SER A 606 AA5 3 CYS A 76 ? PHE A 77 ? CYS A 382 PHE A 383 AA6 1 SER A 153 ? SER A 157 ? SER A 459 SER A 463 AA6 2 TRP A 271 ? THR A 275 ? TRP A 577 THR A 581 AA7 1 PHE A 161 ? SER A 162 ? PHE A 467 SER A 468 AA7 2 LYS A 230 ? LYS A 231 ? LYS A 536 LYS A 537 AA8 1 CYS A 198 ? VAL A 203 ? CYS A 504 VAL A 509 AA8 2 HIS A 206 ? CYS A 212 ? HIS A 512 CYS A 518 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 11 ? N VAL A 317 O ASP A 319 ? O ASP A 625 AA1 2 3 N TYR A 318 ? N TYR A 624 O GLY A 325 ? O GLY A 631 AA1 3 4 N ILE A 328 ? N ILE A 634 O PHE A 366 ? O PHE A 672 AA1 4 5 O ILE A 365 ? O ILE A 671 N ILE A 352 ? N ILE A 658 AA1 5 6 O ILE A 352 ? O ILE A 658 N LEU A 344 ? N LEU A 650 AA2 1 2 N VAL A 32 ? N VAL A 338 O ASN A 131 ? O ASN A 437 AA3 1 2 N PHE A 43 ? N PHE A 349 O ILE A 80 ? O ILE A 386 AA3 2 3 N PHE A 85 ? N PHE A 391 O PHE A 285 ? O PHE A 591 AA3 3 4 O SER A 286 ? O SER A 592 N LEU A 119 ? N LEU A 425 AA3 4 5 O SER A 116 ? O SER A 422 N ASN A 65 ? N ASN A 371 AA4 1 2 N PHE A 43 ? N PHE A 349 O ILE A 80 ? O ILE A 386 AA4 2 3 N PHE A 85 ? N PHE A 391 O PHE A 285 ? O PHE A 591 AA4 3 4 O ARG A 281 ? O ARG A 587 N SER A 278 ? N SER A 584 AA5 1 2 N PHE A 48 ? N PHE A 354 O CYS A 299 ? O CYS A 605 AA5 2 3 O THR A 298 ? O THR A 604 N PHE A 77 ? N PHE A 383 AA6 1 2 N TYR A 156 ? N TYR A 462 O SER A 272 ? O SER A 578 AA7 1 2 N SER A 162 ? N SER A 468 O LYS A 230 ? O LYS A 536 AA8 1 2 N THR A 201 ? N THR A 507 O TRP A 209 ? O TRP A 515 # _atom_sites.entry_id 5GNB _atom_sites.fract_transf_matrix[1][1] 0.011531 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005435 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015833 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 307 ? ? ? A . n A 1 2 GLY 2 308 ? ? ? A . n A 1 3 PHE 3 309 ? ? ? A . n A 1 4 THR 4 310 ? ? ? A . n A 1 5 VAL 5 311 311 VAL VAL A . n A 1 6 LYS 6 312 312 LYS LYS A . n A 1 7 PRO 7 313 313 PRO PRO A . n A 1 8 VAL 8 314 314 VAL VAL A . n A 1 9 ALA 9 315 315 ALA ALA A . n A 1 10 THR 10 316 316 THR THR A . n A 1 11 VAL 11 317 317 VAL VAL A . n A 1 12 HIS 12 318 318 HIS HIS A . n A 1 13 ARG 13 319 319 ARG ARG A . n A 1 14 ARG 14 320 320 ARG ARG A . n A 1 15 ILE 15 321 321 ILE ILE A . n A 1 16 PRO 16 322 322 PRO PRO A . n A 1 17 ASP 17 323 323 ASP ASP A . n A 1 18 LEU 18 324 324 LEU LEU A . n A 1 19 PRO 19 325 325 PRO PRO A . n A 1 20 ASP 20 326 326 ASP ASP A . n A 1 21 CYS 21 327 327 CYS CYS A . n A 1 22 ASP 22 328 328 ASP ASP A . n A 1 23 ILE 23 329 329 ILE ILE A . n A 1 24 ASP 24 330 330 ASP ASP A . n A 1 25 LYS 25 331 331 LYS LYS A . n A 1 26 TRP 26 332 332 TRP TRP A . n A 1 27 LEU 27 333 333 LEU LEU A . n A 1 28 ASN 28 334 334 ASN ASN A . n A 1 29 ASN 29 335 335 ASN ASN A . n A 1 30 PHE 30 336 336 PHE PHE A . n A 1 31 ASN 31 337 337 ASN ASN A . n A 1 32 VAL 32 338 338 VAL VAL A . n A 1 33 PRO 33 339 339 PRO PRO A . n A 1 34 SER 34 340 340 SER SER A . n A 1 35 PRO 35 341 341 PRO PRO A . n A 1 36 LEU 36 342 342 LEU LEU A . n A 1 37 ASN 37 343 343 ASN ASN A . n A 1 38 TRP 38 344 344 TRP TRP A . n A 1 39 GLU 39 345 345 GLU GLU A . n A 1 40 ARG 40 346 346 ARG ARG A . n A 1 41 LYS 41 347 347 LYS LYS A . n A 1 42 ILE 42 348 348 ILE ILE A . n A 1 43 PHE 43 349 349 PHE PHE A . n A 1 44 SER 44 350 350 SER SER A . n A 1 45 ASN 45 351 351 ASN ASN A . n A 1 46 CYS 46 352 352 CYS CYS A . n A 1 47 ASN 47 353 353 ASN ASN A . n A 1 48 PHE 48 354 354 PHE PHE A . n A 1 49 ASN 49 355 355 ASN ASN A . n A 1 50 LEU 50 356 356 LEU LEU A . n A 1 51 SER 51 357 357 SER SER A . n A 1 52 THR 52 358 358 THR THR A . n A 1 53 LEU 53 359 359 LEU LEU A . n A 1 54 LEU 54 360 360 LEU LEU A . n A 1 55 ARG 55 361 361 ARG ARG A . n A 1 56 LEU 56 362 362 LEU LEU A . n A 1 57 VAL 57 363 363 VAL VAL A . n A 1 58 HIS 58 364 364 HIS HIS A . n A 1 59 THR 59 365 365 THR THR A . n A 1 60 ASP 60 366 366 ASP ASP A . n A 1 61 SER 61 367 367 SER SER A . n A 1 62 PHE 62 368 368 PHE PHE A . n A 1 63 SER 63 369 369 SER SER A . n A 1 64 CYS 64 370 370 CYS CYS A . n A 1 65 ASN 65 371 371 ASN ASN A . n A 1 66 ASN 66 372 372 ASN ASN A . n A 1 67 PHE 67 373 373 PHE PHE A . n A 1 68 ASP 68 374 374 ASP ASP A . n A 1 69 GLU 69 375 375 GLU GLU A . n A 1 70 SER 70 376 376 SER SER A . n A 1 71 LYS 71 377 377 LYS LYS A . n A 1 72 ILE 72 378 378 ILE ILE A . n A 1 73 TYR 73 379 379 TYR TYR A . n A 1 74 GLY 74 380 380 GLY GLY A . n A 1 75 SER 75 381 381 SER SER A . n A 1 76 CYS 76 382 382 CYS CYS A . n A 1 77 PHE 77 383 383 PHE PHE A . n A 1 78 LYS 78 384 384 LYS LYS A . n A 1 79 SER 79 385 385 SER SER A . n A 1 80 ILE 80 386 386 ILE ILE A . n A 1 81 VAL 81 387 387 VAL VAL A . n A 1 82 LEU 82 388 388 LEU LEU A . n A 1 83 ASP 83 389 389 ASP ASP A . n A 1 84 LYS 84 390 390 LYS LYS A . n A 1 85 PHE 85 391 391 PHE PHE A . n A 1 86 ALA 86 392 392 ALA ALA A . n A 1 87 ILE 87 393 393 ILE ILE A . n A 1 88 PRO 88 394 394 PRO PRO A . n A 1 89 ASN 89 395 395 ASN ASN A . n A 1 90 SER 90 396 396 SER SER A . n A 1 91 ARG 91 397 397 ARG ARG A . n A 1 92 ARG 92 398 398 ARG ARG A . n A 1 93 SER 93 399 399 SER SER A . n A 1 94 ASP 94 400 400 ASP ASP A . n A 1 95 LEU 95 401 401 LEU LEU A . n A 1 96 GLN 96 402 402 GLN GLN A . n A 1 97 LEU 97 403 403 LEU LEU A . n A 1 98 GLY 98 404 404 GLY GLY A . n A 1 99 SER 99 405 405 SER SER A . n A 1 100 SER 100 406 406 SER SER A . n A 1 101 GLY 101 407 407 GLY GLY A . n A 1 102 PHE 102 408 408 PHE PHE A . n A 1 103 LEU 103 409 409 LEU LEU A . n A 1 104 GLN 104 410 410 GLN GLN A . n A 1 105 SER 105 411 411 SER SER A . n A 1 106 SER 106 412 412 SER SER A . n A 1 107 ASN 107 413 413 ASN ASN A . n A 1 108 TYR 108 414 414 TYR TYR A . n A 1 109 LYS 109 415 415 LYS LYS A . n A 1 110 ILE 110 416 416 ILE ILE A . n A 1 111 ASP 111 417 417 ASP ASP A . n A 1 112 THR 112 418 418 THR THR A . n A 1 113 THR 113 419 419 THR THR A . n A 1 114 SER 114 420 420 SER SER A . n A 1 115 SER 115 421 421 SER SER A . n A 1 116 SER 116 422 422 SER SER A . n A 1 117 CYS 117 423 423 CYS CYS A . n A 1 118 GLN 118 424 424 GLN GLN A . n A 1 119 LEU 119 425 425 LEU LEU A . n A 1 120 TYR 120 426 426 TYR TYR A . n A 1 121 TYR 121 427 427 TYR TYR A . n A 1 122 SER 122 428 428 SER SER A . n A 1 123 LEU 123 429 429 LEU LEU A . n A 1 124 PRO 124 430 430 PRO PRO A . n A 1 125 ALA 125 431 431 ALA ALA A . n A 1 126 ILE 126 432 432 ILE ILE A . n A 1 127 ASN 127 433 433 ASN ASN A . n A 1 128 VAL 128 434 434 VAL VAL A . n A 1 129 THR 129 435 435 THR THR A . n A 1 130 ILE 130 436 436 ILE ILE A . n A 1 131 ASN 131 437 437 ASN ASN A . n A 1 132 ASN 132 438 438 ASN ASN A . n A 1 133 TYR 133 439 439 TYR TYR A . n A 1 134 ASN 134 440 440 ASN ASN A . n A 1 135 PRO 135 441 441 PRO PRO A . n A 1 136 SER 136 442 442 SER SER A . n A 1 137 SER 137 443 443 SER SER A . n A 1 138 TRP 138 444 444 TRP TRP A . n A 1 139 ASN 139 445 445 ASN ASN A . n A 1 140 ARG 140 446 446 ARG ARG A . n A 1 141 ARG 141 447 447 ARG ARG A . n A 1 142 TYR 142 448 448 TYR TYR A . n A 1 143 GLY 143 449 449 GLY GLY A . n A 1 144 PHE 144 450 450 PHE PHE A . n A 1 145 ASN 145 451 451 ASN ASN A . n A 1 146 ASN 146 452 452 ASN ASN A . n A 1 147 PHE 147 453 453 PHE PHE A . n A 1 148 ASN 148 454 454 ASN ASN A . n A 1 149 LEU 149 455 455 LEU LEU A . n A 1 150 SER 150 456 456 SER SER A . n A 1 151 SER 151 457 457 SER SER A . n A 1 152 HIS 152 458 458 HIS HIS A . n A 1 153 SER 153 459 459 SER SER A . n A 1 154 VAL 154 460 460 VAL VAL A . n A 1 155 VAL 155 461 461 VAL VAL A . n A 1 156 TYR 156 462 462 TYR TYR A . n A 1 157 SER 157 463 463 SER SER A . n A 1 158 ARG 158 464 464 ARG ARG A . n A 1 159 TYR 159 465 465 TYR TYR A . n A 1 160 CYS 160 466 466 CYS CYS A . n A 1 161 PHE 161 467 467 PHE PHE A . n A 1 162 SER 162 468 468 SER SER A . n A 1 163 VAL 163 469 469 VAL VAL A . n A 1 164 ASN 164 470 470 ASN ASN A . n A 1 165 ASN 165 471 471 ASN ASN A . n A 1 166 THR 166 472 472 THR THR A . n A 1 167 PHE 167 473 473 PHE PHE A . n A 1 168 CYS 168 474 474 CYS CYS A . n A 1 169 PRO 169 475 475 PRO PRO A . n A 1 170 CYS 170 476 476 CYS CYS A . n A 1 171 ALA 171 477 477 ALA ALA A . n A 1 172 LYS 172 478 478 LYS LYS A . n A 1 173 PRO 173 479 479 PRO PRO A . n A 1 174 SER 174 480 480 SER SER A . n A 1 175 PHE 175 481 481 PHE PHE A . n A 1 176 ALA 176 482 482 ALA ALA A . n A 1 177 SER 177 483 483 SER SER A . n A 1 178 SER 178 484 484 SER SER A . n A 1 179 CYS 179 485 485 CYS CYS A . n A 1 180 LYS 180 486 486 LYS LYS A . n A 1 181 SER 181 487 487 SER SER A . n A 1 182 HIS 182 488 488 HIS HIS A . n A 1 183 LYS 183 489 489 LYS LYS A . n A 1 184 PRO 184 490 490 PRO PRO A . n A 1 185 PRO 185 491 491 PRO PRO A . n A 1 186 SER 186 492 492 SER SER A . n A 1 187 ALA 187 493 493 ALA ALA A . n A 1 188 SER 188 494 494 SER SER A . n A 1 189 CYS 189 495 495 CYS CYS A . n A 1 190 PRO 190 496 496 PRO PRO A . n A 1 191 ILE 191 497 497 ILE ILE A . n A 1 192 GLY 192 498 498 GLY GLY A . n A 1 193 THR 193 499 499 THR THR A . n A 1 194 ASN 194 500 500 ASN ASN A . n A 1 195 TYR 195 501 501 TYR TYR A . n A 1 196 ARG 196 502 502 ARG ARG A . n A 1 197 SER 197 503 503 SER SER A . n A 1 198 CYS 198 504 504 CYS CYS A . n A 1 199 GLU 199 505 505 GLU GLU A . n A 1 200 SER 200 506 506 SER SER A . n A 1 201 THR 201 507 507 THR THR A . n A 1 202 THR 202 508 508 THR THR A . n A 1 203 VAL 203 509 509 VAL VAL A . n A 1 204 LEU 204 510 510 LEU LEU A . n A 1 205 ASP 205 511 511 ASP ASP A . n A 1 206 HIS 206 512 512 HIS HIS A . n A 1 207 THR 207 513 513 THR THR A . n A 1 208 ASP 208 514 514 ASP ASP A . n A 1 209 TRP 209 515 515 TRP TRP A . n A 1 210 CYS 210 516 516 CYS CYS A . n A 1 211 ARG 211 517 517 ARG ARG A . n A 1 212 CYS 212 518 518 CYS CYS A . n A 1 213 SER 213 519 519 SER SER A . n A 1 214 CYS 214 520 520 CYS CYS A . n A 1 215 LEU 215 521 521 LEU LEU A . n A 1 216 PRO 216 522 522 PRO PRO A . n A 1 217 ASP 217 523 523 ASP ASP A . n A 1 218 PRO 218 524 524 PRO PRO A . n A 1 219 ILE 219 525 525 ILE ILE A . n A 1 220 THR 220 526 526 THR THR A . n A 1 221 ALA 221 527 527 ALA ALA A . n A 1 222 TYR 222 528 528 TYR TYR A . n A 1 223 ASP 223 529 529 ASP ASP A . n A 1 224 PRO 224 530 530 PRO PRO A . n A 1 225 ARG 225 531 531 ARG ARG A . n A 1 226 SER 226 532 532 SER SER A . n A 1 227 CYS 227 533 533 CYS CYS A . n A 1 228 SER 228 534 534 SER SER A . n A 1 229 GLN 229 535 535 GLN GLN A . n A 1 230 LYS 230 536 536 LYS LYS A . n A 1 231 LYS 231 537 537 LYS LYS A . n A 1 232 SER 232 538 538 SER SER A . n A 1 233 LEU 233 539 539 LEU LEU A . n A 1 234 VAL 234 540 540 VAL VAL A . n A 1 235 GLY 235 541 541 GLY GLY A . n A 1 236 VAL 236 542 542 VAL VAL A . n A 1 237 GLY 237 543 543 GLY GLY A . n A 1 238 GLU 238 544 544 GLU GLU A . n A 1 239 HIS 239 545 545 HIS HIS A . n A 1 240 CYS 240 546 546 CYS CYS A . n A 1 241 ALA 241 547 547 ALA ALA A . n A 1 242 GLY 242 548 548 GLY GLY A . n A 1 243 PHE 243 549 549 PHE PHE A . n A 1 244 GLY 244 550 550 GLY GLY A . n A 1 245 VAL 245 551 551 VAL VAL A . n A 1 246 ASP 246 552 552 ASP ASP A . n A 1 247 GLU 247 553 553 GLU GLU A . n A 1 248 GLU 248 554 554 GLU GLU A . n A 1 249 LYS 249 555 555 LYS LYS A . n A 1 250 CYS 250 556 556 CYS CYS A . n A 1 251 GLY 251 557 557 GLY GLY A . n A 1 252 VAL 252 558 558 VAL VAL A . n A 1 253 LEU 253 559 559 LEU LEU A . n A 1 254 ASP 254 560 560 ASP ASP A . n A 1 255 GLY 255 561 561 GLY GLY A . n A 1 256 SER 256 562 562 SER SER A . n A 1 257 TYR 257 563 563 TYR TYR A . n A 1 258 ASN 258 564 564 ASN ASN A . n A 1 259 VAL 259 565 565 VAL VAL A . n A 1 260 SER 260 566 566 SER SER A . n A 1 261 CYS 261 567 567 CYS CYS A . n A 1 262 LEU 262 568 568 LEU LEU A . n A 1 263 CYS 263 569 569 CYS CYS A . n A 1 264 SER 264 570 570 SER SER A . n A 1 265 THR 265 571 571 THR THR A . n A 1 266 ASP 266 572 572 ASP ASP A . n A 1 267 ALA 267 573 573 ALA ALA A . n A 1 268 PHE 268 574 574 PHE PHE A . n A 1 269 LEU 269 575 575 LEU LEU A . n A 1 270 GLY 270 576 576 GLY GLY A . n A 1 271 TRP 271 577 577 TRP TRP A . n A 1 272 SER 272 578 578 SER SER A . n A 1 273 TYR 273 579 579 TYR TYR A . n A 1 274 ASP 274 580 580 ASP ASP A . n A 1 275 THR 275 581 581 THR THR A . n A 1 276 CYS 276 582 582 CYS CYS A . n A 1 277 VAL 277 583 583 VAL VAL A . n A 1 278 SER 278 584 584 SER SER A . n A 1 279 ASN 279 585 585 ASN ASN A . n A 1 280 ASN 280 586 586 ASN ASN A . n A 1 281 ARG 281 587 587 ARG ARG A . n A 1 282 CYS 282 588 588 CYS CYS A . n A 1 283 ASN 283 589 589 ASN ASN A . n A 1 284 ILE 284 590 590 ILE ILE A . n A 1 285 PHE 285 591 591 PHE PHE A . n A 1 286 SER 286 592 592 SER SER A . n A 1 287 ASN 287 593 593 ASN ASN A . n A 1 288 PHE 288 594 594 PHE PHE A . n A 1 289 ILE 289 595 595 ILE ILE A . n A 1 290 LEU 290 596 596 LEU LEU A . n A 1 291 ASN 291 597 597 ASN ASN A . n A 1 292 GLY 292 598 598 GLY GLY A . n A 1 293 ILE 293 599 599 ILE ILE A . n A 1 294 ASN 294 600 600 ASN ASN A . n A 1 295 SER 295 601 601 SER SER A . n A 1 296 GLY 296 602 602 GLY GLY A . n A 1 297 THR 297 603 603 THR THR A . n A 1 298 THR 298 604 604 THR THR A . n A 1 299 CYS 299 605 605 CYS CYS A . n A 1 300 SER 300 606 606 SER SER A . n A 1 301 ASN 301 607 607 ASN ASN A . n A 1 302 ASP 302 608 608 ASP ASP A . n A 1 303 LEU 303 609 609 LEU LEU A . n A 1 304 LEU 304 610 610 LEU LEU A . n A 1 305 GLN 305 611 611 GLN GLN A . n A 1 306 PRO 306 612 612 PRO PRO A . n A 1 307 ASN 307 613 613 ASN ASN A . n A 1 308 THR 308 614 614 THR THR A . n A 1 309 GLU 309 615 615 GLU GLU A . n A 1 310 VAL 310 616 616 VAL VAL A . n A 1 311 PHE 311 617 617 PHE PHE A . n A 1 312 THR 312 618 618 THR THR A . n A 1 313 ASP 313 619 619 ASP ASP A . n A 1 314 VAL 314 620 620 VAL VAL A . n A 1 315 CYS 315 621 621 CYS CYS A . n A 1 316 VAL 316 622 622 VAL VAL A . n A 1 317 ASP 317 623 623 ASP ASP A . n A 1 318 TYR 318 624 624 TYR TYR A . n A 1 319 ASP 319 625 625 ASP ASP A . n A 1 320 LEU 320 626 626 LEU LEU A . n A 1 321 TYR 321 627 627 TYR TYR A . n A 1 322 GLY 322 628 628 GLY GLY A . n A 1 323 ILE 323 629 629 ILE ILE A . n A 1 324 THR 324 630 630 THR THR A . n A 1 325 GLY 325 631 631 GLY GLY A . n A 1 326 GLN 326 632 632 GLN GLN A . n A 1 327 GLY 327 633 633 GLY GLY A . n A 1 328 ILE 328 634 634 ILE ILE A . n A 1 329 PHE 329 635 635 PHE PHE A . n A 1 330 LYS 330 636 636 LYS LYS A . n A 1 331 GLU 331 637 637 GLU GLU A . n A 1 332 VAL 332 638 638 VAL VAL A . n A 1 333 SER 333 639 639 SER SER A . n A 1 334 ALA 334 640 640 ALA ALA A . n A 1 335 VAL 335 641 641 VAL VAL A . n A 1 336 TYR 336 642 642 TYR TYR A . n A 1 337 TYR 337 643 643 TYR TYR A . n A 1 338 ASN 338 644 644 ASN ASN A . n A 1 339 SER 339 645 645 SER SER A . n A 1 340 TRP 340 646 646 TRP TRP A . n A 1 341 GLN 341 647 647 GLN GLN A . n A 1 342 ASN 342 648 648 ASN ASN A . n A 1 343 LEU 343 649 649 LEU LEU A . n A 1 344 LEU 344 650 650 LEU LEU A . n A 1 345 TYR 345 651 651 TYR TYR A . n A 1 346 ASP 346 652 652 ASP ASP A . n A 1 347 SER 347 653 653 SER SER A . n A 1 348 ASN 348 654 654 ASN ALA A . n A 1 349 GLY 349 655 655 GLY GLY A . n A 1 350 ASN 350 656 656 ASN ASN A . n A 1 351 ILE 351 657 657 ILE ILE A . n A 1 352 ILE 352 658 658 ILE ILE A . n A 1 353 GLY 353 659 659 GLY GLY A . n A 1 354 PHE 354 660 660 PHE PHE A . n A 1 355 LYS 355 661 661 LYS LYS A . n A 1 356 ASP 356 662 662 ASP ASP A . n A 1 357 PHE 357 663 663 PHE PHE A . n A 1 358 VAL 358 664 664 VAL VAL A . n A 1 359 THR 359 665 665 THR THR A . n A 1 360 ASN 360 666 666 ASN ASN A . n A 1 361 LYS 361 667 667 LYS LYS A . n A 1 362 THR 362 668 668 THR THR A . n A 1 363 TYR 363 669 669 TYR TYR A . n A 1 364 ASN 364 670 670 ASN ASN A . n A 1 365 ILE 365 671 671 ILE ILE A . n A 1 366 PHE 366 672 672 PHE PHE A . n A 1 367 PRO 367 673 673 PRO PRO A . n A 1 368 CYS 368 674 674 CYS CYS A . n A 1 369 TYR 369 675 ? ? ? A . n A 1 370 ALA 370 676 ? ? ? A . n A 1 371 GLY 371 677 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 701 5 NAG NAG A . C 2 NAG 1 702 6 NAG NAG A . D 2 NAG 1 703 7 NAG NAG A . E 2 NAG 1 704 8 NAG NAG A . F 3 HOH 1 801 197 HOH HOH A . F 3 HOH 2 802 224 HOH HOH A . F 3 HOH 3 803 24 HOH HOH A . F 3 HOH 4 804 21 HOH HOH A . F 3 HOH 5 805 161 HOH HOH A . F 3 HOH 6 806 204 HOH HOH A . F 3 HOH 7 807 223 HOH HOH A . F 3 HOH 8 808 45 HOH HOH A . F 3 HOH 9 809 166 HOH HOH A . F 3 HOH 10 810 199 HOH HOH A . F 3 HOH 11 811 3 HOH HOH A . F 3 HOH 12 812 35 HOH HOH A . F 3 HOH 13 813 150 HOH HOH A . F 3 HOH 14 814 233 HOH HOH A . F 3 HOH 15 815 201 HOH HOH A . F 3 HOH 16 816 11 HOH HOH A . F 3 HOH 17 817 70 HOH HOH A . F 3 HOH 18 818 17 HOH HOH A . F 3 HOH 19 819 200 HOH HOH A . F 3 HOH 20 820 209 HOH HOH A . F 3 HOH 21 821 40 HOH HOH A . F 3 HOH 22 822 126 HOH HOH A . F 3 HOH 23 823 226 HOH HOH A . F 3 HOH 24 824 29 HOH HOH A . F 3 HOH 25 825 143 HOH HOH A . F 3 HOH 26 826 82 HOH HOH A . F 3 HOH 27 827 77 HOH HOH A . F 3 HOH 28 828 58 HOH HOH A . F 3 HOH 29 829 86 HOH HOH A . F 3 HOH 30 830 61 HOH HOH A . F 3 HOH 31 831 2 HOH HOH A . F 3 HOH 32 832 14 HOH HOH A . F 3 HOH 33 833 15 HOH HOH A . F 3 HOH 34 834 18 HOH HOH A . F 3 HOH 35 835 20 HOH HOH A . F 3 HOH 36 836 75 HOH HOH A . F 3 HOH 37 837 51 HOH HOH A . F 3 HOH 38 838 7 HOH HOH A . F 3 HOH 39 839 219 HOH HOH A . F 3 HOH 40 840 68 HOH HOH A . F 3 HOH 41 841 81 HOH HOH A . F 3 HOH 42 842 170 HOH HOH A . F 3 HOH 43 843 54 HOH HOH A . F 3 HOH 44 844 50 HOH HOH A . F 3 HOH 45 845 184 HOH HOH A . F 3 HOH 46 846 107 HOH HOH A . F 3 HOH 47 847 227 HOH HOH A . F 3 HOH 48 848 37 HOH HOH A . F 3 HOH 49 849 63 HOH HOH A . F 3 HOH 50 850 25 HOH HOH A . F 3 HOH 51 851 214 HOH HOH A . F 3 HOH 52 852 173 HOH HOH A . F 3 HOH 53 853 5 HOH HOH A . F 3 HOH 54 854 47 HOH HOH A . F 3 HOH 55 855 103 HOH HOH A . F 3 HOH 56 856 27 HOH HOH A . F 3 HOH 57 857 74 HOH HOH A . F 3 HOH 58 858 122 HOH HOH A . F 3 HOH 59 859 171 HOH HOH A . F 3 HOH 60 860 6 HOH HOH A . F 3 HOH 61 861 101 HOH HOH A . F 3 HOH 62 862 73 HOH HOH A . F 3 HOH 63 863 65 HOH HOH A . F 3 HOH 64 864 202 HOH HOH A . F 3 HOH 65 865 83 HOH HOH A . F 3 HOH 66 866 41 HOH HOH A . F 3 HOH 67 867 72 HOH HOH A . F 3 HOH 68 868 10 HOH HOH A . F 3 HOH 69 869 16 HOH HOH A . F 3 HOH 70 870 157 HOH HOH A . F 3 HOH 71 871 215 HOH HOH A . F 3 HOH 72 872 123 HOH HOH A . F 3 HOH 73 873 148 HOH HOH A . F 3 HOH 74 874 146 HOH HOH A . F 3 HOH 75 875 67 HOH HOH A . F 3 HOH 76 876 135 HOH HOH A . F 3 HOH 77 877 44 HOH HOH A . F 3 HOH 78 878 32 HOH HOH A . F 3 HOH 79 879 205 HOH HOH A . F 3 HOH 80 880 110 HOH HOH A . F 3 HOH 81 881 49 HOH HOH A . F 3 HOH 82 882 38 HOH HOH A . F 3 HOH 83 883 90 HOH HOH A . F 3 HOH 84 884 88 HOH HOH A . F 3 HOH 85 885 193 HOH HOH A . F 3 HOH 86 886 128 HOH HOH A . F 3 HOH 87 887 152 HOH HOH A . F 3 HOH 88 888 89 HOH HOH A . F 3 HOH 89 889 8 HOH HOH A . F 3 HOH 90 890 130 HOH HOH A . F 3 HOH 91 891 92 HOH HOH A . F 3 HOH 92 892 181 HOH HOH A . F 3 HOH 93 893 39 HOH HOH A . F 3 HOH 94 894 28 HOH HOH A . F 3 HOH 95 895 121 HOH HOH A . F 3 HOH 96 896 138 HOH HOH A . F 3 HOH 97 897 104 HOH HOH A . F 3 HOH 98 898 132 HOH HOH A . F 3 HOH 99 899 175 HOH HOH A . F 3 HOH 100 900 91 HOH HOH A . F 3 HOH 101 901 213 HOH HOH A . F 3 HOH 102 902 34 HOH HOH A . F 3 HOH 103 903 113 HOH HOH A . F 3 HOH 104 904 62 HOH HOH A . F 3 HOH 105 905 212 HOH HOH A . F 3 HOH 106 906 108 HOH HOH A . F 3 HOH 107 907 112 HOH HOH A . F 3 HOH 108 908 52 HOH HOH A . F 3 HOH 109 909 116 HOH HOH A . F 3 HOH 110 910 165 HOH HOH A . F 3 HOH 111 911 230 HOH HOH A . F 3 HOH 112 912 120 HOH HOH A . F 3 HOH 113 913 139 HOH HOH A . F 3 HOH 114 914 36 HOH HOH A . F 3 HOH 115 915 22 HOH HOH A . F 3 HOH 116 916 95 HOH HOH A . F 3 HOH 117 917 155 HOH HOH A . F 3 HOH 118 918 33 HOH HOH A . F 3 HOH 119 919 131 HOH HOH A . F 3 HOH 120 920 46 HOH HOH A . F 3 HOH 121 921 142 HOH HOH A . F 3 HOH 122 922 179 HOH HOH A . F 3 HOH 123 923 174 HOH HOH A . F 3 HOH 124 924 141 HOH HOH A . F 3 HOH 125 925 229 HOH HOH A . F 3 HOH 126 926 231 HOH HOH A . F 3 HOH 127 927 42 HOH HOH A . F 3 HOH 128 928 186 HOH HOH A . F 3 HOH 129 929 217 HOH HOH A . F 3 HOH 130 930 60 HOH HOH A . F 3 HOH 131 931 106 HOH HOH A . F 3 HOH 132 932 1 HOH HOH A . F 3 HOH 133 933 19 HOH HOH A . F 3 HOH 134 934 125 HOH HOH A . F 3 HOH 135 935 79 HOH HOH A . F 3 HOH 136 936 80 HOH HOH A . F 3 HOH 137 937 55 HOH HOH A . F 3 HOH 138 938 13 HOH HOH A . F 3 HOH 139 939 225 HOH HOH A . F 3 HOH 140 940 85 HOH HOH A . F 3 HOH 141 941 220 HOH HOH A . F 3 HOH 142 942 105 HOH HOH A . F 3 HOH 143 943 102 HOH HOH A . F 3 HOH 144 944 111 HOH HOH A . F 3 HOH 145 945 64 HOH HOH A . F 3 HOH 146 946 114 HOH HOH A . F 3 HOH 147 947 211 HOH HOH A . F 3 HOH 148 948 96 HOH HOH A . F 3 HOH 149 949 98 HOH HOH A . F 3 HOH 150 950 48 HOH HOH A . F 3 HOH 151 951 30 HOH HOH A . F 3 HOH 152 952 191 HOH HOH A . F 3 HOH 153 953 9 HOH HOH A . F 3 HOH 154 954 147 HOH HOH A . F 3 HOH 155 955 145 HOH HOH A . F 3 HOH 156 956 97 HOH HOH A . F 3 HOH 157 957 208 HOH HOH A . F 3 HOH 158 958 100 HOH HOH A . F 3 HOH 159 959 218 HOH HOH A . F 3 HOH 160 960 129 HOH HOH A . F 3 HOH 161 961 109 HOH HOH A . F 3 HOH 162 962 196 HOH HOH A . F 3 HOH 163 963 159 HOH HOH A . F 3 HOH 164 964 76 HOH HOH A . F 3 HOH 165 965 26 HOH HOH A . F 3 HOH 166 966 127 HOH HOH A . F 3 HOH 167 967 151 HOH HOH A . F 3 HOH 168 968 136 HOH HOH A . F 3 HOH 169 969 228 HOH HOH A . F 3 HOH 170 970 56 HOH HOH A . F 3 HOH 171 971 78 HOH HOH A . F 3 HOH 172 972 115 HOH HOH A . F 3 HOH 173 973 153 HOH HOH A . F 3 HOH 174 974 164 HOH HOH A . F 3 HOH 175 975 234 HOH HOH A . F 3 HOH 176 976 23 HOH HOH A . F 3 HOH 177 977 169 HOH HOH A . F 3 HOH 178 978 71 HOH HOH A . F 3 HOH 179 979 178 HOH HOH A . F 3 HOH 180 980 4 HOH HOH A . F 3 HOH 181 981 154 HOH HOH A . F 3 HOH 182 982 99 HOH HOH A . F 3 HOH 183 983 59 HOH HOH A . F 3 HOH 184 984 124 HOH HOH A . F 3 HOH 185 985 57 HOH HOH A . F 3 HOH 186 986 134 HOH HOH A . F 3 HOH 187 987 66 HOH HOH A . F 3 HOH 188 988 84 HOH HOH A . F 3 HOH 189 989 222 HOH HOH A . F 3 HOH 190 990 12 HOH HOH A . F 3 HOH 191 991 195 HOH HOH A . F 3 HOH 192 992 119 HOH HOH A . F 3 HOH 193 993 221 HOH HOH A . F 3 HOH 194 994 206 HOH HOH A . F 3 HOH 195 995 69 HOH HOH A . F 3 HOH 196 996 185 HOH HOH A . F 3 HOH 197 997 210 HOH HOH A . F 3 HOH 198 998 87 HOH HOH A . F 3 HOH 199 999 43 HOH HOH A . F 3 HOH 200 1000 188 HOH HOH A . F 3 HOH 201 1001 176 HOH HOH A . F 3 HOH 202 1002 158 HOH HOH A . F 3 HOH 203 1003 216 HOH HOH A . F 3 HOH 204 1004 31 HOH HOH A . F 3 HOH 205 1005 194 HOH HOH A . F 3 HOH 206 1006 162 HOH HOH A . F 3 HOH 207 1007 94 HOH HOH A . F 3 HOH 208 1008 232 HOH HOH A . F 3 HOH 209 1009 160 HOH HOH A . F 3 HOH 210 1010 190 HOH HOH A . F 3 HOH 211 1011 189 HOH HOH A . F 3 HOH 212 1012 140 HOH HOH A . F 3 HOH 213 1013 156 HOH HOH A . F 3 HOH 214 1014 167 HOH HOH A . F 3 HOH 215 1015 149 HOH HOH A . F 3 HOH 216 1016 198 HOH HOH A . F 3 HOH 217 1017 117 HOH HOH A . F 3 HOH 218 1018 163 HOH HOH A . F 3 HOH 219 1019 183 HOH HOH A . F 3 HOH 220 1020 192 HOH HOH A . F 3 HOH 221 1021 118 HOH HOH A . F 3 HOH 222 1022 172 HOH HOH A . F 3 HOH 223 1023 180 HOH HOH A . F 3 HOH 224 1024 168 HOH HOH A . F 3 HOH 225 1025 182 HOH HOH A . F 3 HOH 226 1026 133 HOH HOH A . F 3 HOH 227 1027 203 HOH HOH A . F 3 HOH 228 1028 207 HOH HOH A . F 3 HOH 229 1029 53 HOH HOH A . F 3 HOH 230 1030 144 HOH HOH A . F 3 HOH 231 1031 93 HOH HOH A . F 3 HOH 232 1032 177 HOH HOH A . F 3 HOH 233 1033 187 HOH HOH A . F 3 HOH 234 1034 137 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 860 ? 1 MORE 12 ? 1 'SSA (A^2)' 18850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 980 ? F HOH . 2 1 A HOH 1002 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-07 2 'Structure model' 1 1 2017-06-14 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' struct 2 2 'Structure model' struct_keywords 3 3 'Structure model' diffrn_detector 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_nonpoly 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_struct.title' 2 2 'Structure model' '_struct_keywords.text' 3 3 'Structure model' '_diffrn_detector.detector' 4 4 'Structure model' '_chem_comp.name' 5 4 'Structure model' '_chem_comp.type' 6 4 'Structure model' '_entity.pdbx_description' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_struct_conn.pdbx_role' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HO3 A NAG 702 ? ? O A HOH 802 ? ? 1.36 2 1 O A LYS 312 ? ? HD22 A ASN 600 ? ? 1.55 3 1 HH21 A ARG 447 ? A O A HOH 810 ? ? 1.56 4 1 HH22 A ARG 531 ? ? O A HOH 812 ? ? 1.56 5 1 HE A ARG 320 ? ? O A HOH 815 ? ? 1.58 6 1 O A HOH 906 ? ? O A HOH 928 ? ? 1.84 7 1 OD1 A ASP 326 ? ? O A HOH 801 ? ? 1.92 8 1 O A HOH 913 ? ? O A HOH 1010 ? ? 1.92 9 1 O3 A NAG 702 ? ? O A HOH 802 ? ? 1.94 10 1 O A HOH 890 ? ? O A HOH 1007 ? ? 1.99 11 1 OD1 A ASN 451 ? A O A HOH 803 ? ? 2.03 12 1 OD2 A ASP 366 ? B O A HOH 804 ? ? 2.06 13 1 OG A SER 562 ? ? OD1 A ASN 564 ? A 2.09 14 1 OE1 A GLU 554 ? ? O A HOH 805 ? ? 2.13 15 1 OG1 A THR 507 ? ? O A HOH 806 ? ? 2.15 16 1 O4 A NAG 702 ? ? O A HOH 807 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 343 ? ? -107.27 51.98 2 1 HIS A 364 ? ? -58.06 77.89 3 1 ASN A 413 ? ? -132.96 -57.91 4 1 ASN A 451 ? ? -105.49 -72.46 5 1 ASN A 451 ? ? -105.00 -73.11 6 1 SER A 456 ? ? -49.14 155.52 7 1 VAL A 509 ? ? -171.16 115.61 8 1 CYS A 520 ? ? 72.79 31.64 9 1 SER A 562 ? ? -101.94 -168.83 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 654 ? CG ? A ASN 348 CG 2 1 Y 1 A ASN 654 ? OD1 ? A ASN 348 OD1 3 1 Y 1 A ASN 654 ? ND2 ? A ASN 348 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 307 ? A SER 1 2 1 Y 1 A GLY 308 ? A GLY 2 3 1 Y 1 A PHE 309 ? A PHE 3 4 1 Y 1 A THR 310 ? A THR 4 5 1 Y 1 A TYR 675 ? A TYR 369 6 1 Y 1 A ALA 676 ? A ALA 370 7 1 Y 1 A GLY 677 ? A GLY 371 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH #