HEADER IMMUNE SYSTEM 13-AUG-16 5GS0 TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF TLR3 AND BI-SPECIFIC DIABODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ECTODOMAIN (UNP RESIDUES 27-697); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LIGHT CHAIN (ANTI-TLR3); COMPND 8 CHAIN: C, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: HEAVY CHAIN (ANTI-TLR3); COMPND 12 CHAIN: D, F; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: HEAVY CHAIN (ANTI-LID); COMPND 16 CHAIN: X, H; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: LIGHT CHAIN (ANTI-LID); COMPND 20 CHAIN: Y, L; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR3; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 20 ORGANISM_TAXID: 10090; SOURCE 21 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 23 MOL_ID: 5; SOURCE 24 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 25 ORGANISM_TAXID: 10090; SOURCE 26 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS DIABODY, ANTIBODY FRAGMENT, COMPLEX, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.H.KIM,D.H.SONG,S.J.YOUN,J.W.KIM,G.CHO,H.LEE,J.O.LEE REVDAT 5 23-OCT-24 5GS0 1 REMARK REVDAT 4 20-MAR-24 5GS0 1 SOURCE REVDAT 3 08-NOV-23 5GS0 1 HETSYN REVDAT 2 29-JUL-20 5GS0 1 COMPND REMARK HETNAM SITE REVDAT 1 12-OCT-16 5GS0 0 JRNL AUTH J.H.KIM,D.H.SONG,S.J.YOUN,J.W.KIM,G.CHO,S.C.KIM,H.LEE, JRNL AUTH 2 M.S.JIN,J.O.LEE JRNL TITL CRYSTAL STRUCTURE OF MONO- AND BI-SPECIFIC DIABODIES AND JRNL TITL 2 REDUCTION OF THEIR STRUCTURAL FLEXIBILITY BY INTRODUCTION OF JRNL TITL 3 DISULFIDE BRIDGES AT THE FV INTERFACE. JRNL REF SCI REP V. 6 34515 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27682821 JRNL DOI 10.1038/SREP34515 REMARK 2 REMARK 2 RESOLUTION. 3.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 58301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0763 - 8.8444 0.95 2833 140 0.1879 0.2394 REMARK 3 2 8.8444 - 7.0386 1.00 2888 154 0.1994 0.2410 REMARK 3 3 7.0386 - 6.1543 1.00 2905 138 0.1813 0.2402 REMARK 3 4 6.1543 - 5.5941 0.99 2938 142 0.1654 0.2151 REMARK 3 5 5.5941 - 5.1945 0.99 2846 146 0.1502 0.2123 REMARK 3 6 5.1945 - 4.8891 0.99 2851 164 0.1526 0.2014 REMARK 3 7 4.8891 - 4.6448 0.98 2850 149 0.1502 0.2280 REMARK 3 8 4.6448 - 4.4430 0.98 2828 138 0.1624 0.2320 REMARK 3 9 4.4430 - 4.2723 0.98 2821 152 0.1738 0.2296 REMARK 3 10 4.2723 - 4.1251 0.97 2793 143 0.1775 0.2273 REMARK 3 11 4.1251 - 3.9963 0.96 2788 143 0.1882 0.2503 REMARK 3 12 3.9963 - 3.8822 0.95 2769 132 0.1966 0.2654 REMARK 3 13 3.8822 - 3.7802 0.96 2714 155 0.2109 0.2635 REMARK 3 14 3.7802 - 3.6880 0.96 2765 147 0.2180 0.2976 REMARK 3 15 3.6880 - 3.6043 0.95 2787 120 0.2310 0.2997 REMARK 3 16 3.6043 - 3.5276 0.95 2734 124 0.2558 0.3229 REMARK 3 17 3.5276 - 3.4571 0.95 2780 121 0.2615 0.3176 REMARK 3 18 3.4571 - 3.3920 0.95 2720 131 0.2816 0.2968 REMARK 3 19 3.3920 - 3.3314 0.95 2752 129 0.2992 0.3715 REMARK 3 20 3.3314 - 3.2750 0.75 2144 127 0.3244 0.3755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 18639 REMARK 3 ANGLE : 1.370 25372 REMARK 3 CHIRALITY : 0.074 2975 REMARK 3 PLANARITY : 0.010 3182 REMARK 3 DIHEDRAL : 16.081 11048 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1300001338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58328 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.275 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ULU, 5GRU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC PH 5.5, REMARK 280 19.5% PEG 2,000, 0.75 M SODIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 70.66450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 27 REMARK 465 CYS A 28 REMARK 465 ASP A 692 REMARK 465 THR A 693 REMARK 465 SER A 694 REMARK 465 SER A 695 REMARK 465 CYS A 696 REMARK 465 LYS A 697 REMARK 465 GLY D 123 REMARK 465 GLY D 124 REMARK 465 GLY D 125 REMARK 465 GLY D 126 REMARK 465 SER D 127 REMARK 465 LYS B 27 REMARK 465 CYS B 28 REMARK 465 ASP B 692 REMARK 465 THR B 693 REMARK 465 SER B 694 REMARK 465 SER B 695 REMARK 465 CYS B 696 REMARK 465 LYS B 697 REMARK 465 GLY F 123 REMARK 465 GLY F 124 REMARK 465 GLY F 125 REMARK 465 GLY F 126 REMARK 465 SER F 127 REMARK 465 SER X 115 REMARK 465 SER X 116 REMARK 465 GLY X 117 REMARK 465 GLY X 118 REMARK 465 GLY X 119 REMARK 465 GLY X 120 REMARK 465 SER X 121 REMARK 465 GLY H 117 REMARK 465 GLY H 118 REMARK 465 GLY H 119 REMARK 465 GLY H 120 REMARK 465 SER H 121 REMARK 465 ILE L 106 REMARK 465 LYS L 107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG E 53 O PHE E 61 2.03 REMARK 500 O GLU Y 81 N ILE Y 83 2.08 REMARK 500 OE2 GLU B 211 OG SER B 213 2.12 REMARK 500 OE2 GLU A 211 OG SER A 213 2.16 REMARK 500 OG SER F 103 OD2 ASP F 110 2.17 REMARK 500 O ASP E 91 O ASN E 94 2.18 REMARK 500 OD1 ASN B 275 O1 NAG B 710 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 407 C PRO A 408 N 0.134 REMARK 500 PRO E 54 CD PRO E 54 N 0.090 REMARK 500 PRO E 93 CD PRO E 93 N 0.136 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 340 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 CYS C 22 CA - CB - SG ANGL. DEV. = 8.0 DEGREES REMARK 500 SER B 339 N - CA - CB ANGL. DEV. = 9.2 DEGREES REMARK 500 LEU B 690 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 ASP E 50 C - N - CA ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG E 53 CB - CA - C ANGL. DEV. = 20.1 DEGREES REMARK 500 PRO E 54 C - N - CD ANGL. DEV. = -30.5 DEGREES REMARK 500 PRO E 54 CA - N - CD ANGL. DEV. = -9.8 DEGREES REMARK 500 PRO E 54 CB - CA - C ANGL. DEV. = -20.2 DEGREES REMARK 500 PRO E 54 N - CA - CB ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO E 54 N - CD - CG ANGL. DEV. = -15.3 DEGREES REMARK 500 PRO E 54 N - CA - C ANGL. DEV. = -18.8 DEGREES REMARK 500 SER E 55 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP E 91 CB - CA - C ANGL. DEV. = 41.0 DEGREES REMARK 500 ASP E 91 N - CA - C ANGL. DEV. = -29.2 DEGREES REMARK 500 VAL F 65 CB - CA - C ANGL. DEV. = 12.2 DEGREES REMARK 500 VAL F 65 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 VAL L 19 CB - CA - C ANGL. DEV. = 19.1 DEGREES REMARK 500 VAL L 19 N - CA - C ANGL. DEV. = -20.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 32 74.77 -157.72 REMARK 500 GLU A 33 -2.37 61.08 REMARK 500 LYS A 139 -73.74 -86.75 REMARK 500 ASN A 140 -76.89 -115.97 REMARK 500 ASN A 141 68.46 -157.20 REMARK 500 SER A 206 29.58 49.37 REMARK 500 ASN A 230 13.26 54.58 REMARK 500 LEU A 233 -57.83 -121.21 REMARK 500 SER A 249 21.66 -75.98 REMARK 500 ARG A 251 -30.36 -131.58 REMARK 500 PHE A 268 36.61 -84.17 REMARK 500 TRP A 273 37.09 -88.52 REMARK 500 ASN A 285 29.15 49.71 REMARK 500 LEU A 286 109.49 -52.64 REMARK 500 ASP A 292 13.53 59.75 REMARK 500 LEU A 297 76.50 -117.73 REMARK 500 PHE A 314 -178.31 -67.18 REMARK 500 ALA A 341 28.86 47.81 REMARK 500 PRO A 344 -177.94 -68.60 REMARK 500 LEU A 357 109.40 -55.26 REMARK 500 ASP A 364 67.09 64.33 REMARK 500 ASN A 388 16.58 52.61 REMARK 500 PHE A 401 34.97 -91.16 REMARK 500 LEU A 455 86.01 -66.94 REMARK 500 ASN A 494 36.98 70.75 REMARK 500 ASP A 496 50.06 -90.64 REMARK 500 LEU A 505 78.14 -103.52 REMARK 500 ASP A 524 31.67 -96.42 REMARK 500 LEU A 542 40.38 -77.48 REMARK 500 PRO A 551 94.64 -61.19 REMARK 500 ASP C 25 107.20 -54.39 REMARK 500 ASP C 50 -4.79 70.84 REMARK 500 SER C 51 -50.75 -121.37 REMARK 500 ALA C 83 -178.91 -170.03 REMARK 500 SER D 15 -2.85 67.51 REMARK 500 ASP D 27 148.55 -176.93 REMARK 500 ARG D 45 -17.86 74.57 REMARK 500 ARG D 56 -74.37 -123.98 REMARK 500 LYS D 66 -13.72 88.00 REMARK 500 GLU B 33 -6.07 74.57 REMARK 500 LYS B 41 19.84 52.35 REMARK 500 PHE B 84 60.33 60.18 REMARK 500 ASN B 140 -79.98 -116.63 REMARK 500 ASN B 141 68.83 -157.11 REMARK 500 SER B 206 29.28 49.48 REMARK 500 ASN B 230 8.44 54.47 REMARK 500 SER B 249 20.79 -75.53 REMARK 500 PHE B 268 38.52 -81.02 REMARK 500 TRP B 273 33.81 -85.21 REMARK 500 ASN B 285 27.68 46.90 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GRU RELATED DB: PDB REMARK 900 RELATED ID: 5GRV RELATED DB: PDB REMARK 900 RELATED ID: 5GRW RELATED DB: PDB REMARK 900 RELATED ID: 5GRX RELATED DB: PDB REMARK 900 RELATED ID: 5GRY RELATED DB: PDB REMARK 900 RELATED ID: 5GRZ RELATED DB: PDB REMARK 900 RELATED ID: 5GS1 RELATED DB: PDB REMARK 900 RELATED ID: 5GS2 RELATED DB: PDB REMARK 900 RELATED ID: 5GS3 RELATED DB: PDB DBREF 5GS0 A 27 697 UNP O15455 TLR3_HUMAN 27 697 DBREF 5GS0 C 1 107 PDB 5GS0 5GS0 1 107 DBREF 5GS0 D 1 127 PDB 5GS0 5GS0 1 127 DBREF 5GS0 B 27 697 UNP O15455 TLR3_HUMAN 27 697 DBREF 5GS0 E 1 107 PDB 5GS0 5GS0 1 107 DBREF 5GS0 F 1 127 PDB 5GS0 5GS0 1 127 DBREF 5GS0 X 1 121 PDB 5GS0 5GS0 1 121 DBREF 5GS0 Y 1 107 PDB 5GS0 5GS0 1 107 DBREF 5GS0 H 1 121 PDB 5GS0 5GS0 1 121 DBREF 5GS0 L 1 107 PDB 5GS0 5GS0 1 107 SEQRES 1 A 671 LYS CYS THR VAL SER HIS GLU VAL ALA ASP CYS SER HIS SEQRES 2 A 671 LEU LYS LEU THR GLN VAL PRO ASP ASP LEU PRO THR ASN SEQRES 3 A 671 ILE THR VAL LEU ASN LEU THR HIS ASN GLN LEU ARG ARG SEQRES 4 A 671 LEU PRO ALA ALA ASN PHE THR ARG TYR SER GLN LEU THR SEQRES 5 A 671 SER LEU ASP VAL GLY PHE ASN THR ILE SER LYS LEU GLU SEQRES 6 A 671 PRO GLU LEU CYS GLN LYS LEU PRO MET LEU LYS VAL LEU SEQRES 7 A 671 ASN LEU GLN HIS ASN GLU LEU SER GLN LEU SER ASP LYS SEQRES 8 A 671 THR PHE ALA PHE CYS THR ASN LEU THR GLU LEU HIS LEU SEQRES 9 A 671 MET SER ASN SER ILE GLN LYS ILE LYS ASN ASN PRO PHE SEQRES 10 A 671 VAL LYS GLN LYS ASN LEU ILE THR LEU ASP LEU SER HIS SEQRES 11 A 671 ASN GLY LEU SER SER THR LYS LEU GLY THR GLN VAL GLN SEQRES 12 A 671 LEU GLU ASN LEU GLN GLU LEU LEU LEU SER ASN ASN LYS SEQRES 13 A 671 ILE GLN ALA LEU LYS SER GLU GLU LEU ASP ILE PHE ALA SEQRES 14 A 671 ASN SER SER LEU LYS LYS LEU GLU LEU SER SER ASN GLN SEQRES 15 A 671 ILE LYS GLU PHE SER PRO GLY CYS PHE HIS ALA ILE GLY SEQRES 16 A 671 ARG LEU PHE GLY LEU PHE LEU ASN ASN VAL GLN LEU GLY SEQRES 17 A 671 PRO SER LEU THR GLU LYS LEU CYS LEU GLU LEU ALA ASN SEQRES 18 A 671 THR SER ILE ARG ASN LEU SER LEU SER ASN SER GLN LEU SEQRES 19 A 671 SER THR THR SER ASN THR THR PHE LEU GLY LEU LYS TRP SEQRES 20 A 671 THR ASN LEU THR MET LEU ASP LEU SER TYR ASN ASN LEU SEQRES 21 A 671 ASN VAL VAL GLY ASN ASP SER PHE ALA TRP LEU PRO GLN SEQRES 22 A 671 LEU GLU TYR PHE PHE LEU GLU TYR ASN ASN ILE GLN HIS SEQRES 23 A 671 LEU PHE SER HIS SER LEU HIS GLY LEU PHE ASN VAL ARG SEQRES 24 A 671 TYR LEU ASN LEU LYS ARG SER PHE THR LYS GLN SER ILE SEQRES 25 A 671 SER LEU ALA SER LEU PRO LYS ILE ASP ASP PHE SER PHE SEQRES 26 A 671 GLN TRP LEU LYS CYS LEU GLU HIS LEU ASN MET GLU ASP SEQRES 27 A 671 ASN ASP ILE PRO GLY ILE LYS SER ASN MET PHE THR GLY SEQRES 28 A 671 LEU ILE ASN LEU LYS TYR LEU SER LEU SER ASN SER PHE SEQRES 29 A 671 THR SER LEU ARG THR LEU THR ASN GLU THR PHE VAL SER SEQRES 30 A 671 LEU ALA HIS SER PRO LEU HIS ILE LEU ASN LEU THR LYS SEQRES 31 A 671 ASN LYS ILE SER LYS ILE GLU SER ASP ALA PHE SER TRP SEQRES 32 A 671 LEU GLY HIS LEU GLU VAL LEU ASP LEU GLY LEU ASN GLU SEQRES 33 A 671 ILE GLY GLN GLU LEU THR GLY GLN GLU TRP ARG GLY LEU SEQRES 34 A 671 GLU ASN ILE PHE GLU ILE TYR LEU SER TYR ASN LYS TYR SEQRES 35 A 671 LEU GLN LEU THR ARG ASN SER PHE ALA LEU VAL PRO SER SEQRES 36 A 671 LEU GLN ARG LEU MET LEU ARG ARG VAL ALA LEU LYS ASN SEQRES 37 A 671 VAL ASP SER SER PRO SER PRO PHE GLN PRO LEU ARG ASN SEQRES 38 A 671 LEU THR ILE LEU ASP LEU SER ASN ASN ASN ILE ALA ASN SEQRES 39 A 671 ILE ASN ASP ASP MET LEU GLU GLY LEU GLU LYS LEU GLU SEQRES 40 A 671 ILE LEU ASP LEU GLN HIS ASN ASN LEU ALA ARG LEU TRP SEQRES 41 A 671 LYS HIS ALA ASN PRO GLY GLY PRO ILE TYR PHE LEU LYS SEQRES 42 A 671 GLY LEU SER HIS LEU HIS ILE LEU ASN LEU GLU SER ASN SEQRES 43 A 671 GLY PHE ASP GLU ILE PRO VAL GLU VAL PHE LYS ASP LEU SEQRES 44 A 671 PHE GLU LEU LYS ILE ILE ASP LEU GLY LEU ASN ASN LEU SEQRES 45 A 671 ASN THR LEU PRO ALA SER VAL PHE ASN ASN GLN VAL SER SEQRES 46 A 671 LEU LYS SER LEU ASN LEU GLN LYS ASN LEU ILE THR SER SEQRES 47 A 671 VAL GLU LYS LYS VAL PHE GLY PRO ALA PHE ARG ASN LEU SEQRES 48 A 671 THR GLU LEU ASP MET ARG PHE ASN PRO PHE ASP CYS THR SEQRES 49 A 671 CYS GLU SER ILE ALA TRP PHE VAL ASN TRP ILE ASN GLU SEQRES 50 A 671 THR HIS THR ASN ILE PRO GLU LEU SER SER HIS TYR LEU SEQRES 51 A 671 CYS ASN THR PRO PRO HIS TYR HIS GLY PHE PRO VAL ARG SEQRES 52 A 671 LEU PHE ASP THR SER SER CYS LYS SEQRES 1 C 107 ASP ILE VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 C 107 PRO GLY GLN THR ALA ARG ILE SER CYS SER GLY ASP ASN SEQRES 3 C 107 ILE GLY SER TYR TYR VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 C 107 GLY GLN ALA PRO VAL LEU VAL ILE TYR GLU ASP SER GLU SEQRES 5 C 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 C 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 C 107 ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SER TYR ASP SEQRES 8 C 107 ASP PRO ASN PHE GLN VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 C 107 THR VAL LYS SEQRES 1 D 127 GLN VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 D 127 PRO SER GLN THR LEU SER LEU THR CYS ALA ILE SER GLY SEQRES 3 D 127 ASP SER VAL SER SER ASN SER ALA ALA TRP GLY TRP ILE SEQRES 4 D 127 ARG GLN SER PRO GLY ARG GLY LEU GLU TRP LEU GLY ILE SEQRES 5 D 127 ILE GLN LYS ARG SER LYS TRP TYR ASN ASN TYR ALA VAL SEQRES 6 D 127 LYS VAL LYS SER LYS ILE THR ILE ASN PRO ASP THR SER SEQRES 7 D 127 LYS ASN GLN PHE SER LEU GLN LEU SER SER VAL THR PRO SEQRES 8 D 127 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG TYR SER TYR SEQRES 9 D 127 PRO PHE TYR SER ILE ASP TYR TRP GLY GLN GLY THR LEU SEQRES 10 D 127 VAL THR VAL SER SER GLY GLY GLY GLY SER SEQRES 1 B 671 LYS CYS THR VAL SER HIS GLU VAL ALA ASP CYS SER HIS SEQRES 2 B 671 LEU LYS LEU THR GLN VAL PRO ASP ASP LEU PRO THR ASN SEQRES 3 B 671 ILE THR VAL LEU ASN LEU THR HIS ASN GLN LEU ARG ARG SEQRES 4 B 671 LEU PRO ALA ALA ASN PHE THR ARG TYR SER GLN LEU THR SEQRES 5 B 671 SER LEU ASP VAL GLY PHE ASN THR ILE SER LYS LEU GLU SEQRES 6 B 671 PRO GLU LEU CYS GLN LYS LEU PRO MET LEU LYS VAL LEU SEQRES 7 B 671 ASN LEU GLN HIS ASN GLU LEU SER GLN LEU SER ASP LYS SEQRES 8 B 671 THR PHE ALA PHE CYS THR ASN LEU THR GLU LEU HIS LEU SEQRES 9 B 671 MET SER ASN SER ILE GLN LYS ILE LYS ASN ASN PRO PHE SEQRES 10 B 671 VAL LYS GLN LYS ASN LEU ILE THR LEU ASP LEU SER HIS SEQRES 11 B 671 ASN GLY LEU SER SER THR LYS LEU GLY THR GLN VAL GLN SEQRES 12 B 671 LEU GLU ASN LEU GLN GLU LEU LEU LEU SER ASN ASN LYS SEQRES 13 B 671 ILE GLN ALA LEU LYS SER GLU GLU LEU ASP ILE PHE ALA SEQRES 14 B 671 ASN SER SER LEU LYS LYS LEU GLU LEU SER SER ASN GLN SEQRES 15 B 671 ILE LYS GLU PHE SER PRO GLY CYS PHE HIS ALA ILE GLY SEQRES 16 B 671 ARG LEU PHE GLY LEU PHE LEU ASN ASN VAL GLN LEU GLY SEQRES 17 B 671 PRO SER LEU THR GLU LYS LEU CYS LEU GLU LEU ALA ASN SEQRES 18 B 671 THR SER ILE ARG ASN LEU SER LEU SER ASN SER GLN LEU SEQRES 19 B 671 SER THR THR SER ASN THR THR PHE LEU GLY LEU LYS TRP SEQRES 20 B 671 THR ASN LEU THR MET LEU ASP LEU SER TYR ASN ASN LEU SEQRES 21 B 671 ASN VAL VAL GLY ASN ASP SER PHE ALA TRP LEU PRO GLN SEQRES 22 B 671 LEU GLU TYR PHE PHE LEU GLU TYR ASN ASN ILE GLN HIS SEQRES 23 B 671 LEU PHE SER HIS SER LEU HIS GLY LEU PHE ASN VAL ARG SEQRES 24 B 671 TYR LEU ASN LEU LYS ARG SER PHE THR LYS GLN SER ILE SEQRES 25 B 671 SER LEU ALA SER LEU PRO LYS ILE ASP ASP PHE SER PHE SEQRES 26 B 671 GLN TRP LEU LYS CYS LEU GLU HIS LEU ASN MET GLU ASP SEQRES 27 B 671 ASN ASP ILE PRO GLY ILE LYS SER ASN MET PHE THR GLY SEQRES 28 B 671 LEU ILE ASN LEU LYS TYR LEU SER LEU SER ASN SER PHE SEQRES 29 B 671 THR SER LEU ARG THR LEU THR ASN GLU THR PHE VAL SER SEQRES 30 B 671 LEU ALA HIS SER PRO LEU HIS ILE LEU ASN LEU THR LYS SEQRES 31 B 671 ASN LYS ILE SER LYS ILE GLU SER ASP ALA PHE SER TRP SEQRES 32 B 671 LEU GLY HIS LEU GLU VAL LEU ASP LEU GLY LEU ASN GLU SEQRES 33 B 671 ILE GLY GLN GLU LEU THR GLY GLN GLU TRP ARG GLY LEU SEQRES 34 B 671 GLU ASN ILE PHE GLU ILE TYR LEU SER TYR ASN LYS TYR SEQRES 35 B 671 LEU GLN LEU THR ARG ASN SER PHE ALA LEU VAL PRO SER SEQRES 36 B 671 LEU GLN ARG LEU MET LEU ARG ARG VAL ALA LEU LYS ASN SEQRES 37 B 671 VAL ASP SER SER PRO SER PRO PHE GLN PRO LEU ARG ASN SEQRES 38 B 671 LEU THR ILE LEU ASP LEU SER ASN ASN ASN ILE ALA ASN SEQRES 39 B 671 ILE ASN ASP ASP MET LEU GLU GLY LEU GLU LYS LEU GLU SEQRES 40 B 671 ILE LEU ASP LEU GLN HIS ASN ASN LEU ALA ARG LEU TRP SEQRES 41 B 671 LYS HIS ALA ASN PRO GLY GLY PRO ILE TYR PHE LEU LYS SEQRES 42 B 671 GLY LEU SER HIS LEU HIS ILE LEU ASN LEU GLU SER ASN SEQRES 43 B 671 GLY PHE ASP GLU ILE PRO VAL GLU VAL PHE LYS ASP LEU SEQRES 44 B 671 PHE GLU LEU LYS ILE ILE ASP LEU GLY LEU ASN ASN LEU SEQRES 45 B 671 ASN THR LEU PRO ALA SER VAL PHE ASN ASN GLN VAL SER SEQRES 46 B 671 LEU LYS SER LEU ASN LEU GLN LYS ASN LEU ILE THR SER SEQRES 47 B 671 VAL GLU LYS LYS VAL PHE GLY PRO ALA PHE ARG ASN LEU SEQRES 48 B 671 THR GLU LEU ASP MET ARG PHE ASN PRO PHE ASP CYS THR SEQRES 49 B 671 CYS GLU SER ILE ALA TRP PHE VAL ASN TRP ILE ASN GLU SEQRES 50 B 671 THR HIS THR ASN ILE PRO GLU LEU SER SER HIS TYR LEU SEQRES 51 B 671 CYS ASN THR PRO PRO HIS TYR HIS GLY PHE PRO VAL ARG SEQRES 52 B 671 LEU PHE ASP THR SER SER CYS LYS SEQRES 1 E 107 ASP ILE VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 E 107 PRO GLY GLN THR ALA ARG ILE SER CYS SER GLY ASP ASN SEQRES 3 E 107 ILE GLY SER TYR TYR VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 E 107 GLY GLN ALA PRO VAL LEU VAL ILE TYR GLU ASP SER GLU SEQRES 5 E 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 E 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 E 107 ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SER TYR ASP SEQRES 8 E 107 ASP PRO ASN PHE GLN VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 E 107 THR VAL LYS SEQRES 1 F 127 GLN VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 F 127 PRO SER GLN THR LEU SER LEU THR CYS ALA ILE SER GLY SEQRES 3 F 127 ASP SER VAL SER SER ASN SER ALA ALA TRP GLY TRP ILE SEQRES 4 F 127 ARG GLN SER PRO GLY ARG GLY LEU GLU TRP LEU GLY ILE SEQRES 5 F 127 ILE GLN LYS ARG SER LYS TRP TYR ASN ASN TYR ALA VAL SEQRES 6 F 127 LYS VAL LYS SER LYS ILE THR ILE ASN PRO ASP THR SER SEQRES 7 F 127 LYS ASN GLN PHE SER LEU GLN LEU SER SER VAL THR PRO SEQRES 8 F 127 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG TYR SER TYR SEQRES 9 F 127 PRO PHE TYR SER ILE ASP TYR TRP GLY GLN GLY THR LEU SEQRES 10 F 127 VAL THR VAL SER SER GLY GLY GLY GLY SER SEQRES 1 X 121 GLN VAL GLN LEU LYS GLU SER GLY PRO GLY LEU VAL ARG SEQRES 2 X 121 PRO SER GLN SER LEU SER LEU THR CYS SER VAL THR GLY SEQRES 3 X 121 TYR SER ILE THR SER GLY TYR TYR TRP ASN TRP ILE ARG SEQRES 4 X 121 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 X 121 SER TYR ASP GLY SER ASN ASN TYR ASN PRO SER LEU LYS SEQRES 6 X 121 GLY ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN SEQRES 7 X 121 PHE PHE LEU LYS LEU ASN SER VAL THR THR ASP ASP THR SEQRES 8 X 121 ALA THR TYR TYR CYS ALA ARG ALA TYR ILE GLY PHE ALA SEQRES 9 X 121 TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER GLY SEQRES 10 X 121 GLY GLY GLY SER SEQRES 1 Y 107 ASP ILE GLN LEU THR GLN SER THR SER SER LEU PRO ALA SEQRES 2 Y 107 SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA GLY SEQRES 3 Y 107 GLN ASP ILE SER ASN HIS LEU ASN TRP TYR GLN GLN LYS SEQRES 4 Y 107 PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 Y 107 ARG LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 Y 107 GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN LEU SEQRES 7 Y 107 GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 Y 107 ASN THR LEU PRO TRP THR PHE GLY GLY GLY SER LYS LEU SEQRES 9 Y 107 GLU ILE LYS SEQRES 1 H 121 GLN VAL GLN LEU LYS GLU SER GLY PRO GLY LEU VAL ARG SEQRES 2 H 121 PRO SER GLN SER LEU SER LEU THR CYS SER VAL THR GLY SEQRES 3 H 121 TYR SER ILE THR SER GLY TYR TYR TRP ASN TRP ILE ARG SEQRES 4 H 121 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 H 121 SER TYR ASP GLY SER ASN ASN TYR ASN PRO SER LEU LYS SEQRES 6 H 121 GLY ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN SEQRES 7 H 121 PHE PHE LEU LYS LEU ASN SER VAL THR THR ASP ASP THR SEQRES 8 H 121 ALA THR TYR TYR CYS ALA ARG ALA TYR ILE GLY PHE ALA SEQRES 9 H 121 TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER GLY SEQRES 10 H 121 GLY GLY GLY SER SEQRES 1 L 107 ASP ILE GLN LEU THR GLN SER THR SER SER LEU PRO ALA SEQRES 2 L 107 SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA GLY SEQRES 3 L 107 GLN ASP ILE SER ASN HIS LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 107 PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 L 107 ARG LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 107 GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN LEU SEQRES 7 L 107 GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 L 107 ASN THR LEU PRO TRP THR PHE GLY GLY GLY SER LYS LEU SEQRES 9 L 107 GLU ILE LYS HET NAG A 801 15 HET NAG A 802 15 HET NAG A 803 15 HET NAG A 804 15 HET NAG A 805 15 HET NAG A 806 15 HET NAG A 807 15 HET NAG A 808 15 HET NAG A 809 15 HET NAG A 810 15 HET NAG A 811 15 HET NAG A 812 15 HET NAG A 813 15 HET NAG A 814 15 HET NAG A 815 15 HET BMA A 816 12 HET NAG A 817 15 HET NAG A 818 15 HET BMA A 819 12 HET MAN A 820 12 HET MAN B 701 12 HET NAG B 702 15 HET NAG B 703 15 HET NAG B 704 15 HET NAG B 705 15 HET NAG B 706 15 HET NAG B 707 15 HET NAG B 708 15 HET NAG B 709 15 HET NAG B 710 15 HET NAG B 711 15 HET NAG B 712 15 HET NAG B 713 15 HET NAG B 714 15 HET NAG B 715 15 HET NAG B 716 15 HET BMA B 717 12 HET NAG B 718 15 HET NAG B 719 15 HET BMA B 720 12 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 11 NAG 34(C8 H15 N O6) FORMUL 26 BMA 4(C6 H12 O6) FORMUL 30 MAN 2(C6 H12 O6) HELIX 1 AA1 PRO A 67 THR A 72 5 6 HELIX 2 AA2 PRO A 92 LYS A 97 1 6 HELIX 3 AA3 LYS A 187 ASP A 192 1 6 HELIX 4 AA4 ILE A 193 ALA A 195 5 3 HELIX 5 AA5 GLY A 234 ALA A 246 1 13 HELIX 6 AA6 LEU A 269 THR A 274 5 6 HELIX 7 AA7 PHE A 314 HIS A 319 5 6 HELIX 8 AA8 GLU A 399 ALA A 405 5 7 HELIX 9 AA9 ALA A 543 LYS A 547 5 5 HELIX 10 AB1 GLU A 626 ARG A 635 1 10 HELIX 11 AB2 THR A 650 THR A 664 1 15 HELIX 12 AB3 GLU A 670 TYR A 675 1 6 HELIX 13 AB4 ASN C 26 TYR C 30 5 5 HELIX 14 AB5 GLN C 78 GLU C 82 5 5 HELIX 15 AB6 THR D 90 THR D 94 5 5 HELIX 16 AB7 PRO B 67 THR B 72 5 6 HELIX 17 AB8 PRO B 92 LEU B 98 1 7 HELIX 18 AB9 LYS B 187 ASP B 192 1 6 HELIX 19 AC1 ILE B 193 ALA B 195 5 3 HELIX 20 AC2 GLY B 234 LEU B 245 1 12 HELIX 21 AC3 THR B 266 THR B 274 5 9 HELIX 22 AC4 PHE B 314 HIS B 319 5 6 HELIX 23 AC5 PHE B 401 ALA B 405 5 5 HELIX 24 AC6 ARG B 473 PHE B 476 5 4 HELIX 25 AC7 ALA B 543 LYS B 547 5 5 HELIX 26 AC8 GLU B 626 ARG B 635 1 10 HELIX 27 AC9 THR B 650 THR B 664 1 15 HELIX 28 AD1 GLU B 670 TYR B 675 1 6 HELIX 29 AD2 PRO B 680 HIS B 684 5 5 HELIX 30 AD3 PRO B 687 PHE B 691 5 5 HELIX 31 AD4 ASN E 26 TYR E 30 5 5 HELIX 32 AD5 THR F 90 THR F 94 5 5 HELIX 33 AD6 ASN X 61 LYS X 65 5 5 HELIX 34 AD7 THR X 87 THR X 91 5 5 HELIX 35 AD8 PRO H 62 LYS H 65 5 4 HELIX 36 AD9 THR H 87 THR H 91 5 5 SHEET 1 AA125 VAL A 34 ASP A 36 0 SHEET 2 AA125 VAL A 55 ASN A 57 1 O VAL A 55 N ALA A 35 SHEET 3 AA125 SER A 79 ASP A 81 1 O SER A 79 N LEU A 56 SHEET 4 AA125 VAL A 103 ASN A 105 1 O VAL A 103 N LEU A 80 SHEET 5 AA125 GLU A 127 HIS A 129 1 O GLU A 127 N LEU A 104 SHEET 6 AA125 THR A 151 ASP A 153 1 O THR A 151 N LEU A 128 SHEET 7 AA125 GLU A 175 LEU A 177 1 O GLU A 175 N LEU A 152 SHEET 8 AA125 LYS A 201 GLU A 203 1 O LYS A 201 N LEU A 176 SHEET 9 AA125 GLY A 225 PHE A 227 1 O PHE A 227 N LEU A 202 SHEET 10 AA125 ASN A 252 SER A 254 1 O ASN A 252 N LEU A 226 SHEET 11 AA125 MET A 278 ASP A 280 1 O ASP A 280 N LEU A 253 SHEET 12 AA125 TYR A 302 PHE A 304 1 O PHE A 304 N LEU A 279 SHEET 13 AA125 TYR A 326 ASN A 328 1 O TYR A 326 N PHE A 303 SHEET 14 AA125 HIS A 359 ASN A 361 1 O HIS A 359 N LEU A 327 SHEET 15 AA125 TYR A 383 SER A 385 1 O TYR A 383 N LEU A 360 SHEET 16 AA125 ILE A 411 ASN A 413 1 O ILE A 411 N LEU A 384 SHEET 17 AA125 VAL A 435 ASP A 437 1 O VAL A 435 N LEU A 412 SHEET 18 AA125 GLU A 460 TYR A 462 1 O TYR A 462 N LEU A 436 SHEET 19 AA125 ARG A 484 MET A 486 1 O MET A 486 N ILE A 461 SHEET 20 AA125 ILE A 510 ASP A 512 1 O ILE A 510 N LEU A 485 SHEET 21 AA125 ILE A 534 ASP A 536 1 O ILE A 534 N LEU A 511 SHEET 22 AA125 ILE A 566 ASN A 568 1 O ILE A 566 N LEU A 535 SHEET 23 AA125 ILE A 590 ASP A 592 1 O ILE A 590 N LEU A 567 SHEET 24 AA125 SER A 614 ASN A 616 1 O SER A 614 N ILE A 591 SHEET 25 AA125 GLU A 639 ASP A 641 1 O ASP A 641 N LEU A 615 SHEET 1 AA2 2 SER A 198 LEU A 199 0 SHEET 2 AA2 2 ARG A 222 LEU A 223 1 O ARG A 222 N LEU A 199 SHEET 1 AA3 2 THR A 262 THR A 263 0 SHEET 2 AA3 2 VAL A 288 VAL A 289 1 O VAL A 288 N THR A 263 SHEET 1 AA4 2 THR A 395 LEU A 396 0 SHEET 2 AA4 2 LYS A 421 ILE A 422 1 O LYS A 421 N LEU A 396 SHEET 1 AA5 2 GLY A 444 LEU A 447 0 SHEET 2 AA5 2 TYR A 468 LEU A 471 1 O GLN A 470 N LEU A 447 SHEET 1 AA6 2 PHE A 647 ASP A 648 0 SHEET 2 AA6 2 CYS A 677 THR A 679 1 O ASN A 678 N PHE A 647 SHEET 1 AA7 5 SER C 9 VAL C 12 0 SHEET 2 AA7 5 THR C 102 VAL C 106 1 O THR C 105 N VAL C 12 SHEET 3 AA7 5 ALA C 83 SER C 89 -1 N TYR C 85 O THR C 102 SHEET 4 AA7 5 HIS C 33 GLN C 37 -1 N GLN C 37 O ASP C 84 SHEET 5 AA7 5 VAL C 44 ILE C 47 -1 O ILE C 47 N TRP C 34 SHEET 1 AA8 4 SER C 9 VAL C 12 0 SHEET 2 AA8 4 THR C 102 VAL C 106 1 O THR C 105 N VAL C 12 SHEET 3 AA8 4 ALA C 83 SER C 89 -1 N TYR C 85 O THR C 102 SHEET 4 AA8 4 VAL C 97 PHE C 98 -1 O VAL C 97 N SER C 89 SHEET 1 AA9 3 ALA C 18 SER C 23 0 SHEET 2 AA9 3 THR C 69 ILE C 74 -1 O ILE C 74 N ALA C 18 SHEET 3 AA9 3 PHE C 61 SER C 66 -1 N SER C 62 O THR C 73 SHEET 1 AB1 4 GLN D 3 SER D 7 0 SHEET 2 AB1 4 LEU D 18 SER D 25 -1 O SER D 25 N GLN D 3 SHEET 3 AB1 4 GLN D 81 LEU D 86 -1 O PHE D 82 N CYS D 22 SHEET 4 AB1 4 ASN D 74 ASP D 76 -1 N ASP D 76 O GLN D 81 SHEET 1 AB2 6 LEU D 11 VAL D 12 0 SHEET 2 AB2 6 THR D 116 VAL D 120 1 O THR D 119 N VAL D 12 SHEET 3 AB2 6 ALA D 95 SER D 103 -1 N ALA D 95 O VAL D 118 SHEET 4 AB2 6 ALA D 34 GLN D 41 -1 N ILE D 39 O TYR D 98 SHEET 5 AB2 6 LEU D 47 LYS D 55 -1 O ILE D 53 N TRP D 36 SHEET 6 AB2 6 TRP D 59 TYR D 63 -1 O TYR D 60 N GLN D 54 SHEET 1 AB3 4 LEU D 11 VAL D 12 0 SHEET 2 AB3 4 THR D 116 VAL D 120 1 O THR D 119 N VAL D 12 SHEET 3 AB3 4 ALA D 95 SER D 103 -1 N ALA D 95 O VAL D 118 SHEET 4 AB3 4 SER D 108 TRP D 112 -1 O SER D 108 N SER D 103 SHEET 1 AB426 VAL B 30 SER B 31 0 SHEET 2 AB426 VAL B 34 ASP B 36 -1 O ASP B 36 N VAL B 30 SHEET 3 AB426 VAL B 55 ASN B 57 1 O ASN B 57 N ALA B 35 SHEET 4 AB426 SER B 79 ASP B 81 1 O ASP B 81 N LEU B 56 SHEET 5 AB426 VAL B 103 ASN B 105 1 O VAL B 103 N LEU B 80 SHEET 6 AB426 GLU B 127 HIS B 129 1 O GLU B 127 N LEU B 104 SHEET 7 AB426 THR B 151 ASP B 153 1 O ASP B 153 N LEU B 128 SHEET 8 AB426 GLU B 175 LEU B 177 1 O LEU B 177 N LEU B 152 SHEET 9 AB426 LYS B 201 GLU B 203 1 O LYS B 201 N LEU B 176 SHEET 10 AB426 GLY B 225 PHE B 227 1 O PHE B 227 N LEU B 202 SHEET 11 AB426 ASN B 252 SER B 254 1 O ASN B 252 N LEU B 226 SHEET 12 AB426 MET B 278 ASP B 280 1 O MET B 278 N LEU B 253 SHEET 13 AB426 TYR B 302 PHE B 304 1 O PHE B 304 N LEU B 279 SHEET 14 AB426 TYR B 326 ASN B 328 1 O TYR B 326 N PHE B 303 SHEET 15 AB426 HIS B 359 ASN B 361 1 O HIS B 359 N LEU B 327 SHEET 16 AB426 TYR B 383 SER B 385 1 O TYR B 383 N LEU B 360 SHEET 17 AB426 ILE B 411 ASN B 413 1 O ILE B 411 N LEU B 384 SHEET 18 AB426 VAL B 435 ASP B 437 1 O ASP B 437 N LEU B 412 SHEET 19 AB426 GLU B 460 TYR B 462 1 O TYR B 462 N LEU B 436 SHEET 20 AB426 ARG B 484 MET B 486 1 O MET B 486 N ILE B 461 SHEET 21 AB426 ILE B 510 ASP B 512 1 O ILE B 510 N LEU B 485 SHEET 22 AB426 ILE B 534 ASP B 536 1 O ILE B 534 N LEU B 511 SHEET 23 AB426 ILE B 566 ASN B 568 1 O ASN B 568 N LEU B 535 SHEET 24 AB426 ILE B 590 ASP B 592 1 O ASP B 592 N LEU B 567 SHEET 25 AB426 SER B 614 ASN B 616 1 O SER B 614 N ILE B 591 SHEET 26 AB426 GLU B 639 ASP B 641 1 O ASP B 641 N LEU B 615 SHEET 1 AB5 2 SER B 198 LEU B 199 0 SHEET 2 AB5 2 ARG B 222 LEU B 223 1 O ARG B 222 N LEU B 199 SHEET 1 AB6 2 THR B 262 THR B 263 0 SHEET 2 AB6 2 VAL B 288 VAL B 289 1 O VAL B 288 N THR B 263 SHEET 1 AB7 2 HIS B 312 LEU B 313 0 SHEET 2 AB7 2 LYS B 345 ILE B 346 1 O LYS B 345 N LEU B 313 SHEET 1 AB8 2 THR B 395 LEU B 396 0 SHEET 2 AB8 2 LYS B 421 ILE B 422 1 O LYS B 421 N LEU B 396 SHEET 1 AB9 2 GLY B 444 LEU B 447 0 SHEET 2 AB9 2 TYR B 468 LEU B 471 1 O GLN B 470 N GLN B 445 SHEET 1 AC1 5 SER E 9 VAL E 12 0 SHEET 2 AC1 5 THR E 102 VAL E 106 1 O LYS E 103 N VAL E 10 SHEET 3 AC1 5 ALA E 83 SER E 89 -1 N ALA E 83 O LEU E 104 SHEET 4 AC1 5 HIS E 33 GLN E 37 -1 N TYR E 35 O TYR E 86 SHEET 5 AC1 5 VAL E 44 ILE E 47 -1 O ILE E 47 N TRP E 34 SHEET 1 AC2 4 SER E 9 VAL E 12 0 SHEET 2 AC2 4 THR E 102 VAL E 106 1 O LYS E 103 N VAL E 10 SHEET 3 AC2 4 ALA E 83 SER E 89 -1 N ALA E 83 O LEU E 104 SHEET 4 AC2 4 VAL E 97 PHE E 98 -1 O VAL E 97 N SER E 89 SHEET 1 AC3 3 ALA E 18 SER E 23 0 SHEET 2 AC3 3 THR E 69 ILE E 74 -1 O ILE E 74 N ALA E 18 SHEET 3 AC3 3 PHE E 61 GLY E 63 -1 N SER E 62 O THR E 73 SHEET 1 AC4 4 GLN F 3 SER F 7 0 SHEET 2 AC4 4 LEU F 18 SER F 25 -1 O SER F 25 N GLN F 3 SHEET 3 AC4 4 GLN F 81 LEU F 86 -1 O LEU F 84 N LEU F 20 SHEET 4 AC4 4 ILE F 71 ASP F 76 -1 N ASP F 76 O GLN F 81 SHEET 1 AC5 6 LEU F 11 VAL F 12 0 SHEET 2 AC5 6 THR F 116 VAL F 120 1 O THR F 119 N VAL F 12 SHEET 3 AC5 6 ALA F 95 SER F 103 -1 N ALA F 95 O VAL F 118 SHEET 4 AC5 6 ALA F 34 GLN F 41 -1 N ALA F 35 O TYR F 102 SHEET 5 AC5 6 LEU F 47 LYS F 55 -1 O ILE F 53 N TRP F 36 SHEET 6 AC5 6 TRP F 59 TYR F 63 -1 O TYR F 60 N GLN F 54 SHEET 1 AC6 4 LEU F 11 VAL F 12 0 SHEET 2 AC6 4 THR F 116 VAL F 120 1 O THR F 119 N VAL F 12 SHEET 3 AC6 4 ALA F 95 SER F 103 -1 N ALA F 95 O VAL F 118 SHEET 4 AC6 4 SER F 108 TRP F 112 -1 O TYR F 111 N ARG F 101 SHEET 1 AC7 4 LEU X 4 SER X 7 0 SHEET 2 AC7 4 GLN X 16 VAL X 24 -1 O THR X 21 N SER X 7 SHEET 3 AC7 4 GLN X 78 VAL X 86 -1 O VAL X 86 N GLN X 16 SHEET 4 AC7 4 ILE X 68 ASP X 73 -1 N THR X 71 O PHE X 80 SHEET 1 AC8 4 LEU X 46 SER X 53 0 SHEET 2 AC8 4 TYR X 34 GLN X 40 -1 N TRP X 37 O MET X 49 SHEET 3 AC8 4 ALA X 92 ALA X 99 -1 O ALA X 97 N ASN X 36 SHEET 4 AC8 4 PHE X 103 TRP X 106 -1 O TYR X 105 N ARG X 98 SHEET 1 AC9 4 LEU X 46 SER X 53 0 SHEET 2 AC9 4 TYR X 34 GLN X 40 -1 N TRP X 37 O MET X 49 SHEET 3 AC9 4 ALA X 92 ALA X 99 -1 O ALA X 97 N ASN X 36 SHEET 4 AC9 4 THR X 110 VAL X 112 -1 O THR X 110 N TYR X 94 SHEET 1 AD1 4 LEU Y 4 THR Y 8 0 SHEET 2 AD1 4 VAL Y 19 ALA Y 25 -1 O ARG Y 24 N THR Y 5 SHEET 3 AD1 4 ASP Y 70 ILE Y 75 -1 O TYR Y 71 N CYS Y 23 SHEET 4 AD1 4 PHE Y 62 SER Y 65 -1 N SER Y 63 O THR Y 74 SHEET 1 AD2 4 ARG Y 53 LEU Y 54 0 SHEET 2 AD2 4 VAL Y 44 TYR Y 49 -1 N TYR Y 49 O ARG Y 53 SHEET 3 AD2 4 LEU Y 33 GLN Y 38 -1 N TRP Y 35 O LEU Y 47 SHEET 4 AD2 4 THR Y 85 GLN Y 90 -1 O GLN Y 89 N ASN Y 34 SHEET 1 AD3 4 LEU H 4 SER H 7 0 SHEET 2 AD3 4 LEU H 18 VAL H 24 -1 O THR H 21 N SER H 7 SHEET 3 AD3 4 GLN H 78 LEU H 83 -1 O PHE H 79 N CYS H 22 SHEET 4 AD3 4 ILE H 68 ASP H 73 -1 N ASP H 73 O GLN H 78 SHEET 1 AD4 5 ASN H 59 TYR H 60 0 SHEET 2 AD4 5 LEU H 46 SER H 53 -1 N TYR H 51 O ASN H 59 SHEET 3 AD4 5 TYR H 34 GLN H 40 -1 N TRP H 37 O MET H 49 SHEET 4 AD4 5 ALA H 92 ALA H 99 -1 O TYR H 95 N ILE H 38 SHEET 5 AD4 5 PHE H 103 TRP H 106 -1 O ALA H 104 N ARG H 98 SHEET 1 AD5 5 ASN H 59 TYR H 60 0 SHEET 2 AD5 5 LEU H 46 SER H 53 -1 N TYR H 51 O ASN H 59 SHEET 3 AD5 5 TYR H 34 GLN H 40 -1 N TRP H 37 O MET H 49 SHEET 4 AD5 5 ALA H 92 ALA H 99 -1 O TYR H 95 N ILE H 38 SHEET 5 AD5 5 LEU H 111 VAL H 112 -1 O VAL H 112 N ALA H 92 SHEET 1 AD6 4 LEU L 4 THR L 5 0 SHEET 2 AD6 4 SER L 22 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AD6 4 ASP L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 AD6 4 PHE L 62 SER L 67 -1 N SER L 65 O SER L 72 SHEET 1 AD7 5 ARG L 53 LEU L 54 0 SHEET 2 AD7 5 VAL L 44 TYR L 49 -1 N TYR L 49 O ARG L 53 SHEET 3 AD7 5 LEU L 33 GLN L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 AD7 5 THR L 85 GLN L 90 -1 O GLN L 89 N ASN L 34 SHEET 5 AD7 5 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SSBOND 1 CYS A 95 CYS A 122 1555 1555 2.04 SSBOND 2 CYS A 649 CYS A 677 1555 1555 2.01 SSBOND 3 CYS C 22 CYS C 87 1555 1555 2.03 SSBOND 4 CYS D 22 CYS D 99 1555 1555 2.06 SSBOND 5 CYS B 95 CYS B 122 1555 1555 2.03 SSBOND 6 CYS B 649 CYS B 677 1555 1555 2.02 SSBOND 7 CYS E 22 CYS E 87 1555 1555 2.04 SSBOND 8 CYS F 22 CYS F 99 1555 1555 2.06 SSBOND 9 CYS X 22 CYS X 96 1555 1555 2.04 SSBOND 10 CYS Y 23 CYS Y 88 1555 1555 2.07 SSBOND 11 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 12 CYS L 23 CYS L 88 1555 1555 2.05 CISPEP 1 THR A 679 PRO A 680 0 -3.37 CISPEP 2 TYR D 104 PRO D 105 0 9.37 CISPEP 3 TYR F 104 PRO F 105 0 9.42 CISPEP 4 LEU Y 94 PRO Y 95 0 7.48 CISPEP 5 LEU L 94 PRO L 95 0 11.71 CRYST1 98.519 141.329 150.831 90.00 106.88 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010150 0.000000 0.003081 0.00000 SCALE2 0.000000 0.007076 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006929 0.00000