HEADER TOXIN 23-AUG-16 5GTT TITLE CRYSTAL STRUCTURE OF C. PERFRINGENS IOTA-LIKE ENTEROTOXIN CPILE-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: BINARY ENTEROTOXIN OF CLOSTRIDIUM PERFRINGENS COMPONENT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CPILE-A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 STRAIN: W5052; SOURCE 5 GENE: BECA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS BACTERIAL TOXIN, ACTIN, CPILE-A, ADP-RIBOSYLATION, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR W.TONITI,T.YOSHIDA,T.TSURUMURA,D.IRIKURA,H.TSUGE REVDAT 2 20-MAR-24 5GTT 1 REMARK REVDAT 1 01-MAR-17 5GTT 0 JRNL AUTH W.TONITI,T.YOSHIDA,T.TSURUMURA,D.IRIKURA,C.MONMA,Y.KAMATA, JRNL AUTH 2 H.TSUGE JRNL TITL CRYSTAL STRUCTURE AND STRUCTURE-BASED MUTAGENESIS OF JRNL TITL 2 ACTIN-SPECIFIC ADP-RIBOSYLATING TOXIN CPILE-A AS NOVEL JRNL TITL 3 ENTEROTOXIN JRNL REF PLOS ONE V. 12 71278 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28199340 JRNL DOI 10.1371/JOURNAL.PONE.0171278 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 29557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.750 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.8333 - 4.8302 1.00 2129 153 0.1526 0.2128 REMARK 3 2 4.8302 - 3.8407 1.00 2038 148 0.1376 0.1562 REMARK 3 3 3.8407 - 3.3572 1.00 2021 147 0.1601 0.2468 REMARK 3 4 3.3572 - 3.0511 1.00 2007 145 0.1823 0.2381 REMARK 3 5 3.0511 - 2.8329 1.00 2005 146 0.1854 0.2360 REMARK 3 6 2.8329 - 2.6662 1.00 1996 145 0.1907 0.2415 REMARK 3 7 2.6662 - 2.5329 1.00 2005 145 0.1858 0.2412 REMARK 3 8 2.5329 - 2.4228 1.00 1969 142 0.1943 0.2768 REMARK 3 9 2.4228 - 2.3296 1.00 1986 145 0.1990 0.2535 REMARK 3 10 2.3296 - 2.2493 1.00 1975 143 0.2058 0.3062 REMARK 3 11 2.2493 - 2.1790 0.99 1973 141 0.2144 0.2717 REMARK 3 12 2.1790 - 2.1168 0.97 1927 140 0.2329 0.2993 REMARK 3 13 2.1168 - 2.0611 0.93 1842 134 0.2540 0.2804 REMARK 3 14 2.0611 - 2.0109 0.86 1688 122 0.2788 0.2743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3399 REMARK 3 ANGLE : 1.084 4591 REMARK 3 CHIRALITY : 0.042 512 REMARK 3 PLANARITY : 0.005 589 REMARK 3 DIHEDRAL : 13.448 1278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8955 -7.9962 -22.3528 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.4452 REMARK 3 T33: 0.3978 T12: -0.0854 REMARK 3 T13: -0.0969 T23: 0.0884 REMARK 3 L TENSOR REMARK 3 L11: 3.1407 L22: 1.9915 REMARK 3 L33: 2.2544 L12: -0.9284 REMARK 3 L13: -0.3822 L23: -0.2668 REMARK 3 S TENSOR REMARK 3 S11: -0.0725 S12: 0.5175 S13: 0.6717 REMARK 3 S21: -0.1329 S22: 0.0341 S23: -0.0329 REMARK 3 S31: -0.3132 S32: -0.0172 S33: 0.0217 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2990 -21.3504 -10.2719 REMARK 3 T TENSOR REMARK 3 T11: 0.1974 T22: 0.4183 REMARK 3 T33: 0.2485 T12: -0.0154 REMARK 3 T13: -0.0476 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.4632 L22: 3.0891 REMARK 3 L33: 2.2520 L12: -0.1888 REMARK 3 L13: -0.4628 L23: -1.3883 REMARK 3 S TENSOR REMARK 3 S11: -0.0249 S12: -0.0160 S13: 0.0429 REMARK 3 S21: -0.1346 S22: 0.0851 S23: 0.3389 REMARK 3 S31: 0.1210 S32: -0.3326 S33: -0.0357 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5194 -28.7466 -13.8319 REMARK 3 T TENSOR REMARK 3 T11: 0.2633 T22: 0.4653 REMARK 3 T33: 0.1570 T12: 0.0429 REMARK 3 T13: -0.0009 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.6328 L22: 1.0822 REMARK 3 L33: 1.8087 L12: -0.3419 REMARK 3 L13: -0.1271 L23: -0.2876 REMARK 3 S TENSOR REMARK 3 S11: -0.0624 S12: 0.0847 S13: -0.0017 REMARK 3 S21: -0.1151 S22: -0.0347 S23: -0.2285 REMARK 3 S31: 0.2353 S32: 0.4087 S33: 0.0972 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 419 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2565 -31.7400 -20.3515 REMARK 3 T TENSOR REMARK 3 T11: 0.2537 T22: 0.4472 REMARK 3 T33: 0.2075 T12: 0.0217 REMARK 3 T13: 0.0127 T23: -0.0644 REMARK 3 L TENSOR REMARK 3 L11: 1.8166 L22: 1.3046 REMARK 3 L33: 2.3080 L12: -0.2067 REMARK 3 L13: 0.2181 L23: -0.3340 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: 0.4505 S13: -0.2093 REMARK 3 S21: -0.2792 S22: -0.0152 S23: 0.0190 REMARK 3 S31: 0.2621 S32: 0.1738 S33: 0.0503 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GTT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1300001431. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29584 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, TRIS HCL, MAGNESIUM REMARK 280 CHLORIDE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.16900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.33250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 63.00150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.16900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.33250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.00150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.16900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.33250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.00150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.16900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.33250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.00150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 771 O HOH A 795 1.97 REMARK 500 O HOH A 762 O HOH A 822 1.98 REMARK 500 O HOH A 685 O HOH A 841 2.00 REMARK 500 O HOH A 632 O HOH A 829 2.04 REMARK 500 O LEU A 29 O HOH A 601 2.04 REMARK 500 O HOH A 640 O HOH A 816 2.06 REMARK 500 O HOH A 759 O HOH A 814 2.09 REMARK 500 N ASP A 3 O HOH A 602 2.14 REMARK 500 O HOH A 708 O HOH A 821 2.15 REMARK 500 O HOH A 803 O HOH A 820 2.15 REMARK 500 OE1 GLU A 291 O HOH A 603 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 778 O HOH A 823 3555 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 11 -106.53 59.16 REMARK 500 ASN A 46 25.21 -154.84 REMARK 500 ASN A 63 47.44 -104.58 REMARK 500 ASN A 163 -3.37 81.26 REMARK 500 ASN A 213 99.39 -164.94 REMARK 500 GLU A 215 -100.30 46.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 266 ASN A 267 144.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 DBREF 5GTT A 1 419 UNP X5I2D7 X5I2D7_CLOPF 1 419 SEQADV 5GTT GLY A -1 UNP X5I2D7 EXPRESSION TAG SEQADV 5GTT SER A 0 UNP X5I2D7 EXPRESSION TAG SEQRES 1 A 421 GLY SER MET LEU ASP ASP ASN ARG PRO MET ASP PHE ALA SEQRES 2 A 421 LYS ASP LYS ASN SER ALA THR LEU TRP ALA LYS LYS ARG SEQRES 3 A 421 LYS GLN VAL TRP LEU ASN ASN LEU SER LYS ALA GLU SER SEQRES 4 A 421 THR SER ILE ASN ASN TYR ILE LYS ASN SER SER GLU ILE SEQRES 5 A 421 ASN SER TYR SER ILE LYS LYS LYS PHE ALA LEU ASP ASN SEQRES 6 A 421 TYR GLU GLY ILE GLU THR LEU ASN GLU ASP LEU LYS ASN SEQRES 7 A 421 ILE SER THR ALA VAL LYS LYS SER MET LEU THR LYS PRO SEQRES 8 A 421 LEU TYR VAL TYR TYR TYR GLU ALA ASN ASP LYS PHE GLY SEQRES 9 A 421 PHE ASN GLN ASN LEU GLU SER SER LEU ASP SER ASN ILE SEQRES 10 A 421 ILE ASP GLU GLU ALA ILE ASN ASN PHE ALA LYS LYS ILE SEQRES 11 A 421 SER ASP THR ASN PHE ILE GLN ASP GLY PHE LYS ASP VAL SEQRES 12 A 421 THR MET THR GLU PRO ASP ILE ASN SER LYS LEU PRO ILE SEQRES 13 A 421 LEU VAL HIS LEU LYS LEU PRO THR ASN THR PRO ALA ALA SEQRES 14 A 421 SER TYR GLY ASN ASP GLU GLU ASN LEU ARG VAL LEU ILE SEQRES 15 A 421 ASP GLN GLY TYR SER LEU LYS ALA THR GLY LEU SER ILE SEQRES 16 A 421 VAL THR ILE LYS GLY LYS GLN TYR ALA LYS VAL ASP ALA SEQRES 17 A 421 ASP LEU ILE LYS GLN LEU ASN PHE GLU ASN ASP VAL ILE SEQRES 18 A 421 SER ALA SER GLN TRP GLY GLU GLU ASN TYR ALA PRO TRP SEQRES 19 A 421 LEU LYS GLU LEU THR SER ASN GLU LEU ARG ASP ILE ASN SEQRES 20 A 421 ASN TYR LEU GLY GLY GLY TYR THR ALA ILE ASN LYS TYR SEQRES 21 A 421 LEU LEU ASP GLY THR ILE GLY GLU ASN THR SER LYS GLU SEQRES 22 A 421 ASP LEU GLU GLU LYS ILE SER ASN ILE SER SER ALA LEU SEQRES 23 A 421 LYS LYS ARG LYS ILE PRO GLU ASP ILE ILE THR TYR ARG SEQRES 24 A 421 ARG MET GLY PRO ASN GLU PHE GLY LEU ASP LEU ASN SER SEQRES 25 A 421 PRO ASP TYR ASP PHE ASN LYS VAL GLU ASN VAL SER LYS SEQRES 26 A 421 PHE LYS GLU LYS TRP LEU GLY LYS THR ILE PRO VAL LYS SEQRES 27 A 421 THR PHE ILE SER THR THR VAL LEU SER ASN ASN ILE SER SEQRES 28 A 421 ALA PHE ALA LYS ARG LYS LEU ILE LEU ARG LEU HIS LEU SEQRES 29 A 421 PRO ASN GLY SER ASN ALA ALA TYR VAL SER VAL ALA GLU SEQRES 30 A 421 GLY TYR LYS ASN GLU TYR GLU VAL LEU ILE ASP HIS GLY SEQRES 31 A 421 TYR SER TYR LYS ILE ASP ASN ILE THR GLU TYR TYR ASP SEQRES 32 A 421 GLU SER SER LEU GLY GLY LYS THR ASN LYS LEU ILE ILE SEQRES 33 A 421 ASP ALA THR LEU ILE HET EDO A 501 4 HET EDO A 502 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *249(H2 O) HELIX 1 AA1 ASP A 13 ASN A 31 1 19 HELIX 2 AA2 SER A 33 PHE A 59 1 27 HELIX 3 AA3 ILE A 67 LYS A 82 1 16 HELIX 4 AA4 ALA A 97 GLY A 102 5 6 HELIX 5 AA5 ASP A 117 SER A 129 1 13 HELIX 6 AA6 ASP A 217 GLU A 235 1 19 HELIX 7 AA7 THR A 237 GLY A 249 1 13 HELIX 8 AA8 GLY A 251 GLY A 262 1 12 HELIX 9 AA9 SER A 269 LYS A 285 1 17 HELIX 10 AB1 GLY A 300 GLY A 305 5 6 HELIX 11 AB2 SER A 310 ASP A 314 5 5 HELIX 12 AB3 LYS A 317 LEU A 329 1 13 HELIX 13 AB4 ILE A 348 ALA A 352 5 5 HELIX 14 AB5 SER A 372 ALA A 374 5 3 HELIX 15 AB6 TYR A 377 GLU A 380 5 4 SHEET 1 AA1 5 LEU A 90 GLU A 96 0 SHEET 2 AA1 5 ILE A 154 LEU A 160 -1 O VAL A 156 N TYR A 94 SHEET 3 AA1 5 LYS A 199 ILE A 209 1 O ALA A 206 N LYS A 159 SHEET 4 AA1 5 SER A 185 ILE A 196 -1 N LYS A 187 O ASP A 207 SHEET 5 AA1 5 PHE A 133 ILE A 134 -1 N PHE A 133 O LEU A 186 SHEET 1 AA2 3 LYS A 139 VAL A 141 0 SHEET 2 AA2 3 ARG A 177 ILE A 180 -1 O ILE A 180 N LYS A 139 SHEET 3 AA2 3 ALA A 166 TYR A 169 -1 N TYR A 169 O ARG A 177 SHEET 1 AA3 5 ILE A 293 MET A 299 0 SHEET 2 AA3 5 LEU A 356 LEU A 362 -1 O LEU A 358 N ARG A 297 SHEET 3 AA3 5 THR A 409 ILE A 419 1 O ILE A 414 N ILE A 357 SHEET 4 AA3 5 SER A 390 ASP A 401 -1 N THR A 397 O ILE A 413 SHEET 5 AA3 5 THR A 332 PRO A 334 -1 N ILE A 333 O TYR A 391 SHEET 1 AA4 3 ILE A 339 THR A 342 0 SHEET 2 AA4 3 GLU A 382 ILE A 385 -1 O ILE A 385 N ILE A 339 SHEET 3 AA4 3 ALA A 368 TYR A 370 -1 N ALA A 369 O LEU A 384 SITE 1 AC1 3 ARG A 297 SER A 340 HOH A 768 SITE 1 AC2 2 GLU A 380 GLU A 382 CRYST1 70.338 100.665 126.003 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014217 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007936 0.00000