HEADER SIGNALING PROTEIN 01-SEP-16 5GV2 TITLE CRYSTAL STRUCTURE OF ARGININE-BOUND CASTOR1 FROM HOMO SAPIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GATS-LIKE PROTEIN 3; COMPND 3 CHAIN: C, A; COMPND 4 SYNONYM: CELLULAR ARGININE SENSOR FOR MTORC1 PROTEIN 1,CASTOR1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GATSL3, CASTOR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CASTOR1, ARGININE, DIMER, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.C.GAI,G.WU REVDAT 4 20-MAR-24 5GV2 1 REMARK REVDAT 3 20-MAR-19 5GV2 1 JRNL REVDAT 2 23-MAY-18 5GV2 1 REMARK REVDAT 1 06-SEP-17 5GV2 0 JRNL AUTH Z.GAI,Q.WANG,C.YANG,L.WANG,W.DENG,G.WU JRNL TITL STRUCTURAL MECHANISM FOR THE ARGININE SENSING AND REGULATION JRNL TITL 2 OF CASTOR1 IN THE MTORC1 SIGNALING PATHWAY JRNL REF CELL DISCOV V. 2 16051 2016 JRNL REFN ESSN 2056-5968 JRNL PMID 28066558 JRNL DOI 10.1038/CELLDISC.2016.51 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 79.0 REMARK 3 NUMBER OF REFLECTIONS : 31497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1678 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 938 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 31.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4793 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.34000 REMARK 3 B33 (A**2) : -0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.281 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.421 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4914 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4735 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6688 ; 1.871 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10883 ; 1.132 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 7.581 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 211 ;29.669 ;23.223 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 799 ;18.738 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;18.871 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 786 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5434 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1106 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2438 ; 3.036 ; 2.976 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2437 ; 3.037 ; 2.977 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3030 ; 4.820 ; 4.428 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3031 ; 4.819 ; 4.427 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2476 ; 3.704 ; 3.333 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2476 ; 3.704 ; 3.333 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3659 ; 5.798 ; 4.850 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5241 ; 8.213 ;23.523 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5209 ; 8.206 ;23.487 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5GV2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1300001503. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 135965 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 94.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MAGNESIUM ACETATE REMARK 280 TETRAHYDRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.41700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C -18 REMARK 465 GLY C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C 160 REMARK 465 ASN C 161 REMARK 465 GLY C 162 REMARK 465 PHE C 163 REMARK 465 PRO C 164 REMARK 465 ARG C 165 REMARK 465 THR C 166 REMARK 465 GLN C 167 REMARK 465 HIS C 168 REMARK 465 GLY C 169 REMARK 465 PRO C 170 REMARK 465 SER C 171 REMARK 465 HIS C 209 REMARK 465 SER C 210 REMARK 465 THR C 211 REMARK 465 PRO C 212 REMARK 465 LYS C 213 REMARK 465 GLU C 214 REMARK 465 ALA C 215 REMARK 465 ALA C 216 REMARK 465 SER C 217 REMARK 465 SER C 218 REMARK 465 SER C 219 REMARK 465 PRO C 220 REMARK 465 GLU C 221 REMARK 465 SER C 258 REMARK 465 SER C 259 REMARK 465 GLU C 396 REMARK 465 GLY C 397 REMARK 465 LEU C 398 REMARK 465 ALA C 399 REMARK 465 SER C 400 REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 SER A 159 REMARK 465 SER A 160 REMARK 465 ASN A 161 REMARK 465 GLY A 162 REMARK 465 PHE A 163 REMARK 465 PRO A 164 REMARK 465 ARG A 165 REMARK 465 THR A 166 REMARK 465 GLN A 167 REMARK 465 HIS A 168 REMARK 465 GLY A 169 REMARK 465 PRO A 170 REMARK 465 SER A 171 REMARK 465 PRO A 172 REMARK 465 SER A 210 REMARK 465 THR A 211 REMARK 465 PRO A 212 REMARK 465 LYS A 213 REMARK 465 GLU A 214 REMARK 465 ALA A 215 REMARK 465 ALA A 216 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 SER A 219 REMARK 465 PRO A 220 REMARK 465 GLU A 221 REMARK 465 SER A 258 REMARK 465 SER A 259 REMARK 465 GLU A 325 REMARK 465 GLY A 326 REMARK 465 LEU A 327 REMARK 465 ALA A 328 REMARK 465 SER A 329 REMARK 465 ARG A 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO C 222 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 11 O HOH A 501 2.01 REMARK 500 OE1 GLN C 139 O HOH C 601 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 11 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU C 31 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 PRO C 222 N - CA - CB ANGL. DEV. = 8.1 DEGREES REMARK 500 PRO C 250 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 LEU A 31 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 ASP A 50 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 LEU A 255 CB - CG - CD2 ANGL. DEV. = 11.8 DEGREES REMARK 500 GLY A 274 C - N - CA ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG C 156 69.53 2.65 REMARK 500 ASP C 157 94.98 63.06 REMARK 500 PRO C 250 -5.90 -42.54 REMARK 500 ASP A 50 -177.94 -177.93 REMARK 500 THR A 155 -71.12 -135.61 REMARK 500 ASP A 157 -127.85 -84.78 REMARK 500 PRO A 250 -15.15 -44.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 401 DBREF 5GV2 C 1 400 UNP Q8WTX7 GATL3_HUMAN 1 329 DBREF 5GV2 A 1 329 UNP Q8WTX7 GATL3_HUMAN 1 329 SEQADV 5GV2 MET C -18 UNP Q8WTX7 INITIATING METHIONINE SEQADV 5GV2 GLY C -17 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER C -16 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -15 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -14 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -13 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -12 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -11 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C -10 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER C -9 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER C -8 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 GLY C -7 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 LEU C -6 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 VAL C -5 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 PRO C -4 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 ARG C -3 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 GLY C -2 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER C -1 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS C 0 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 ARG C 401 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 MET A -18 UNP Q8WTX7 INITIATING METHIONINE SEQADV 5GV2 GLY A -17 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER A -16 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -15 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -14 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -13 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -12 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -11 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A -10 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER A -9 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER A -8 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 GLY A -7 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 LEU A -6 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 VAL A -5 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 PRO A -4 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 ARG A -3 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 GLY A -2 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 SER A -1 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 HIS A 0 UNP Q8WTX7 EXPRESSION TAG SEQADV 5GV2 ARG A 330 UNP Q8WTX7 EXPRESSION TAG SEQRES 1 C 349 MET GLY SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 C 349 VAL PRO ARG GLY SER HIS MET GLU LEU HIS ILE LEU GLU SEQRES 3 C 349 HIS ARG VAL ARG VAL LEU SER VAL ALA ARG PRO GLY LEU SEQRES 4 C 349 TRP LEU TYR THR HIS PRO LEU ILE LYS LEU LEU PHE LEU SEQRES 5 C 349 PRO ARG ARG SER ARG CYS LYS PHE PHE SER LEU THR GLU SEQRES 6 C 349 THR PRO GLU ASP TYR THR LEU MET VAL ASP GLU GLU GLY SEQRES 7 C 349 PHE LYS GLU LEU PRO PRO SER GLU PHE LEU GLN VAL ALA SEQRES 8 C 349 GLU ALA THR TRP LEU VAL LEU ASN VAL SER SER HIS SER SEQRES 9 C 349 GLY ALA ALA VAL GLN ALA ALA GLY VAL THR LYS ILE ALA SEQRES 10 C 349 ARG SER VAL ILE ALA PRO LEU ALA GLU HIS HIS VAL SER SEQRES 11 C 349 VAL LEU MET LEU SER THR TYR GLN THR ASP PHE ILE LEU SEQRES 12 C 349 VAL ARG GLU GLN ASP LEU SER VAL VAL ILE HIS THR LEU SEQRES 13 C 349 ALA GLN GLU PHE ASP ILE TYR ARG GLU VAL GLY GLY GLU SEQRES 14 C 349 PRO VAL PRO VAL THR ARG ASP ASP SER SER ASN GLY PHE SEQRES 15 C 349 PRO ARG THR GLN HIS GLY PRO SER PRO THR VAL HIS PRO SEQRES 16 C 349 ILE GLN SER PRO GLN ASN ARG PHE CYS VAL LEU THR LEU SEQRES 17 C 349 ASP PRO GLU THR LEU PRO ALA ILE ALA THR THR LEU ILE SEQRES 18 C 349 ASP VAL LEU PHE TYR SER HIS SER THR PRO LYS GLU ALA SEQRES 19 C 349 ALA SER SER SER PRO GLU PRO SER SER ILE THR PHE PHE SEQRES 20 C 349 ALA PHE SER LEU ILE GLU GLY TYR ILE SER ILE VAL MET SEQRES 21 C 349 ASP ALA GLU THR GLN LYS LYS PHE PRO SER ASP LEU LEU SEQRES 22 C 349 LEU THR SER SER SER GLY GLU LEU TRP ARG MET VAL ARG SEQRES 23 C 349 ILE GLY GLY GLN PRO LEU GLY PHE ASP GLU CYS GLY ILE SEQRES 24 C 349 VAL ALA GLN ILE ALA GLY PRO LEU ALA ALA ALA ASP ILE SEQRES 25 C 349 SER ALA TYR TYR ILE SER THR PHE ASN PHE ASP HIS ALA SEQRES 26 C 349 LEU VAL PRO GLU ASP GLY ILE GLY SER VAL ILE GLU VAL SEQRES 27 C 349 LEU GLN ARG ARG GLN GLU GLY LEU ALA SER ARG SEQRES 1 A 349 MET GLY SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 349 VAL PRO ARG GLY SER HIS MET GLU LEU HIS ILE LEU GLU SEQRES 3 A 349 HIS ARG VAL ARG VAL LEU SER VAL ALA ARG PRO GLY LEU SEQRES 4 A 349 TRP LEU TYR THR HIS PRO LEU ILE LYS LEU LEU PHE LEU SEQRES 5 A 349 PRO ARG ARG SER ARG CYS LYS PHE PHE SER LEU THR GLU SEQRES 6 A 349 THR PRO GLU ASP TYR THR LEU MET VAL ASP GLU GLU GLY SEQRES 7 A 349 PHE LYS GLU LEU PRO PRO SER GLU PHE LEU GLN VAL ALA SEQRES 8 A 349 GLU ALA THR TRP LEU VAL LEU ASN VAL SER SER HIS SER SEQRES 9 A 349 GLY ALA ALA VAL GLN ALA ALA GLY VAL THR LYS ILE ALA SEQRES 10 A 349 ARG SER VAL ILE ALA PRO LEU ALA GLU HIS HIS VAL SER SEQRES 11 A 349 VAL LEU MET LEU SER THR TYR GLN THR ASP PHE ILE LEU SEQRES 12 A 349 VAL ARG GLU GLN ASP LEU SER VAL VAL ILE HIS THR LEU SEQRES 13 A 349 ALA GLN GLU PHE ASP ILE TYR ARG GLU VAL GLY GLY GLU SEQRES 14 A 349 PRO VAL PRO VAL THR ARG ASP ASP SER SER ASN GLY PHE SEQRES 15 A 349 PRO ARG THR GLN HIS GLY PRO SER PRO THR VAL HIS PRO SEQRES 16 A 349 ILE GLN SER PRO GLN ASN ARG PHE CYS VAL LEU THR LEU SEQRES 17 A 349 ASP PRO GLU THR LEU PRO ALA ILE ALA THR THR LEU ILE SEQRES 18 A 349 ASP VAL LEU PHE TYR SER HIS SER THR PRO LYS GLU ALA SEQRES 19 A 349 ALA SER SER SER PRO GLU PRO SER SER ILE THR PHE PHE SEQRES 20 A 349 ALA PHE SER LEU ILE GLU GLY TYR ILE SER ILE VAL MET SEQRES 21 A 349 ASP ALA GLU THR GLN LYS LYS PHE PRO SER ASP LEU LEU SEQRES 22 A 349 LEU THR SER SER SER GLY GLU LEU TRP ARG MET VAL ARG SEQRES 23 A 349 ILE GLY GLY GLN PRO LEU GLY PHE ASP GLU CYS GLY ILE SEQRES 24 A 349 VAL ALA GLN ILE ALA GLY PRO LEU ALA ALA ALA ASP ILE SEQRES 25 A 349 SER ALA TYR TYR ILE SER THR PHE ASN PHE ASP HIS ALA SEQRES 26 A 349 LEU VAL PRO GLU ASP GLY ILE GLY SER VAL ILE GLU VAL SEQRES 27 A 349 LEU GLN ARG ARG GLN GLU GLY LEU ALA SER ARG HET MG C 501 1 HET ARG A 401 12 HETNAM MG MAGNESIUM ION HETNAM ARG ARGININE FORMUL 3 MG MG 2+ FORMUL 4 ARG C6 H15 N4 O2 1+ FORMUL 5 HOH *149(H2 O) HELIX 1 AA1 ARG C 17 LEU C 22 5 6 HELIX 2 AA2 TYR C 23 LEU C 33 1 11 HELIX 3 AA3 PRO C 34 SER C 37 5 4 HELIX 4 AA4 GLU C 57 LYS C 61 1 5 HELIX 5 AA5 SER C 83 ALA C 87 5 5 HELIX 6 AA6 VAL C 94 ALA C 98 5 5 HELIX 7 AA7 VAL C 101 HIS C 108 1 8 HELIX 8 AA8 ASP C 129 ALA C 138 1 10 HELIX 9 AA9 ASP C 190 GLU C 192 5 3 HELIX 10 AB1 THR C 193 TYR C 207 1 15 HELIX 11 AB2 ALA C 243 LYS C 247 1 5 HELIX 12 AB3 GLY C 279 ALA C 291 1 13 HELIX 13 AB4 GLY C 312 ARG C 322 1 11 HELIX 14 AB5 ARG A 17 LEU A 22 5 6 HELIX 15 AB6 TYR A 23 LEU A 33 1 11 HELIX 16 AB7 PRO A 34 SER A 37 5 4 HELIX 17 AB8 GLU A 57 LYS A 61 1 5 HELIX 18 AB9 VAL A 94 ALA A 98 5 5 HELIX 19 AC1 VAL A 101 HIS A 108 1 8 HELIX 20 AC2 ASP A 129 ALA A 138 1 10 HELIX 21 AC3 ASP A 190 GLU A 192 5 3 HELIX 22 AC4 THR A 193 TYR A 207 1 15 HELIX 23 AC5 ALA A 243 LYS A 247 1 5 HELIX 24 AC6 GLY A 279 ALA A 291 1 13 HELIX 25 AC7 GLY A 312 ARG A 322 1 11 SHEET 1 AA1 9 LEU C 69 VAL C 71 0 SHEET 2 AA1 9 GLU C 2 VAL C 15 -1 N SER C 14 O GLN C 70 SHEET 3 AA1 9 TRP C 76 SER C 82 -1 O TRP C 76 N VAL C 10 SHEET 4 AA1 9 ASP C 121 ARG C 126 -1 O VAL C 125 N LEU C 77 SHEET 5 AA1 9 VAL C 112 SER C 116 -1 N LEU C 113 O LEU C 124 SHEET 6 AA1 9 TYR C 296 SER C 299 -1 O SER C 299 N MET C 114 SHEET 7 AA1 9 ASP C 304 PRO C 309 -1 O HIS C 305 N ILE C 298 SHEET 8 AA1 9 TRP C 263 ILE C 268 -1 N ARG C 264 O VAL C 308 SHEET 9 AA1 9 ILE C 177 GLN C 178 -1 N GLN C 178 O ARG C 267 SHEET 1 AA210 GLU C 150 PRO C 153 0 SHEET 2 AA210 ASP C 142 VAL C 147 -1 N ARG C 145 O VAL C 152 SHEET 3 AA210 GLU C 2 VAL C 15 1 N ILE C 5 O GLU C 146 SHEET 4 AA210 TYR C 51 ASP C 56 -1 O VAL C 55 N ARG C 11 SHEET 5 AA210 PHE C 41 GLU C 46 -1 N SER C 43 O MET C 54 SHEET 6 AA210 PHE C 228 ILE C 233 -1 O PHE C 228 N GLU C 46 SHEET 7 AA210 TYR C 236 ASP C 242 -1 O SER C 238 N SER C 231 SHEET 8 AA210 ARG C 183 LEU C 187 -1 N LEU C 187 O ILE C 239 SHEET 9 AA210 TRP C 263 ILE C 268 -1 O TRP C 263 N PHE C 184 SHEET 10 AA210 ILE C 177 GLN C 178 -1 N GLN C 178 O ARG C 267 SHEET 1 AA3 9 LEU A 69 VAL A 71 0 SHEET 2 AA3 9 MET A 1 VAL A 15 -1 N SER A 14 O GLN A 70 SHEET 3 AA3 9 TRP A 76 SER A 82 -1 O ASN A 80 N HIS A 4 SHEET 4 AA3 9 ASP A 121 ARG A 126 -1 O VAL A 125 N LEU A 77 SHEET 5 AA3 9 VAL A 112 SER A 116 -1 N LEU A 113 O LEU A 124 SHEET 6 AA3 9 TYR A 296 SER A 299 -1 O SER A 299 N MET A 114 SHEET 7 AA3 9 ASP A 304 PRO A 309 -1 O HIS A 305 N ILE A 298 SHEET 8 AA3 9 TRP A 263 ILE A 268 -1 N ARG A 264 O VAL A 308 SHEET 9 AA3 9 ILE A 177 GLN A 178 -1 N GLN A 178 O ARG A 267 SHEET 1 AA410 GLU A 150 PRO A 153 0 SHEET 2 AA410 PHE A 141 VAL A 147 -1 N ARG A 145 O VAL A 152 SHEET 3 AA410 MET A 1 VAL A 15 1 N ILE A 5 O TYR A 144 SHEET 4 AA410 TYR A 51 ASP A 56 -1 O VAL A 55 N ARG A 11 SHEET 5 AA410 PHE A 41 GLU A 46 -1 N THR A 45 O THR A 52 SHEET 6 AA410 PHE A 228 ILE A 233 -1 O PHE A 230 N LEU A 44 SHEET 7 AA410 TYR A 236 ASP A 242 -1 O SER A 238 N SER A 231 SHEET 8 AA410 ARG A 183 LEU A 187 -1 N LEU A 187 O ILE A 239 SHEET 9 AA410 TRP A 263 ILE A 268 -1 O TRP A 263 N PHE A 184 SHEET 10 AA410 ILE A 177 GLN A 178 -1 N GLN A 178 O ARG A 267 SITE 1 AC1 4 HIS A 108 HIS A 135 HIS C 108 HIS C 135 SITE 1 AC2 16 SER A 111 VAL A 112 LEU A 273 GLY A 274 SITE 2 AC2 16 GLU A 277 CYS A 278 GLY A 279 ILE A 280 SITE 3 AC2 16 VAL A 281 SER A 299 THR A 300 PHE A 301 SITE 4 AC2 16 PHE A 303 ASP A 304 HOH A 538 HOH A 547 CRYST1 47.547 76.834 95.223 90.00 96.21 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021032 0.000000 0.002287 0.00000 SCALE2 0.000000 0.013015 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010564 0.00000