data_5GWQ # _entry.id 5GWQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GWQ pdb_00005gwq 10.2210/pdb5gwq/pdb WWPDB D_1300001543 ? ? BMRB 36022 ? 10.13018/BMR36022 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-12 2 'Structure model' 1 1 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' entity 5 2 'Structure model' pdbx_nmr_software 6 2 'Structure model' pdbx_nmr_spectrometer 7 2 'Structure model' pdbx_prerelease_seq 8 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_entity.pdbx_number_of_molecules' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' 6 2 'Structure model' '_struct_conn.pdbx_dist_value' 7 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 9 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5GWQ _pdbx_database_status.recvd_initial_deposition_date 2016-09-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB . 36022 unspecified PDB . 5GWL unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Guo, P.' 1 'Lam, S.L.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 138 _citation.language ? _citation.page_first 12534 _citation.page_last 12540 _citation.title 'Minidumbbell: A New Form of Native DNA Structure' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.6b06897 _citation.pdbx_database_id_PubMed 27589409 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, P.' 1 ? primary 'Lam, S.L.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*TP*TP*AP*TP*TP*TP*A)-3') ; 2406.613 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DT)(DT)(DA)(DT)(DT)(DT)(DA)' _entity_poly.pdbx_seq_one_letter_code_can TTTATTTA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'SODIUM ION' _pdbx_entity_nonpoly.comp_id NA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Staphylococcus aureus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1280 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DA 8 8 8 DA DA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 101 9 NA NA A . C 2 NA 1 102 10 NA NA A . D 2 NA 1 103 11 NA NA A . E 2 NA 1 104 12 NA NA A . F 2 NA 1 105 13 NA NA A . G 2 NA 1 106 14 NA NA A . H 2 NA 1 107 15 NA NA A . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GWQ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5GWQ _struct.title 'Structure of two TTTA repeats' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GWQ _struct_keywords.text 'Minidumbbell, type II loop, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5GWQ _struct_ref.pdbx_db_accession 5GWQ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GWQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5GWQ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 860 ? 1 MORE -73 ? 1 'SSA (A^2)' 1480 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 2 OP1 ? ? ? 1_555 D NA . NA ? ? A DT 2 A NA 103 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc2 metalc ? ? A DT 2 OP2 ? ? ? 1_555 D NA . NA ? ? A DT 2 A NA 103 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc3 metalc ? ? A DT 2 O4 ? ? ? 1_555 F NA . NA ? ? A DT 2 A NA 105 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc4 metalc ? ? A DT 3 OP1 ? ? ? 1_555 B NA . NA ? ? A DT 3 A NA 101 1_555 ? ? ? ? ? ? ? 5.383 ? ? metalc5 metalc ? ? A DT 3 OP2 ? ? ? 1_555 B NA . NA ? ? A DT 3 A NA 101 1_555 ? ? ? ? ? ? ? 6.370 ? ? metalc6 metalc ? ? A DT 3 "O5'" ? ? ? 1_555 B NA . NA ? ? A DT 3 A NA 101 1_555 ? ? ? ? ? ? ? 6.160 ? ? metalc7 metalc ? ? A DT 3 OP1 ? ? ? 1_555 E NA . NA ? ? A DT 3 A NA 104 1_555 ? ? ? ? ? ? ? 8.098 ? ? metalc8 metalc ? ? A DA 4 OP1 ? ? ? 1_555 B NA . NA ? ? A DA 4 A NA 101 1_555 ? ? ? ? ? ? ? 3.055 ? ? metalc9 metalc ? ? A DA 4 OP2 ? ? ? 1_555 G NA . NA ? ? A DA 4 A NA 106 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc10 metalc ? ? A DA 4 "O5'" ? ? ? 1_555 G NA . NA ? ? A DA 4 A NA 106 1_555 ? ? ? ? ? ? ? 4.246 ? ? metalc11 metalc ? ? A DT 5 OP1 ? ? ? 1_555 E NA . NA ? ? A DT 5 A NA 104 1_555 ? ? ? ? ? ? ? 10.258 ? ? metalc12 metalc ? ? A DT 6 OP1 ? ? ? 1_555 H NA . NA ? ? A DT 6 A NA 107 1_555 ? ? ? ? ? ? ? 7.894 ? ? metalc13 metalc ? ? A DT 6 OP2 ? ? ? 1_555 H NA . NA ? ? A DT 6 A NA 107 1_555 ? ? ? ? ? ? ? 8.225 ? ? metalc14 metalc ? ? A DT 7 OP2 ? ? ? 1_555 C NA . NA ? ? A DT 7 A NA 102 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc15 metalc ? ? A DT 7 OP1 ? ? ? 1_555 F NA . NA ? ? A DT 7 A NA 105 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc16 metalc ? ? A DT 7 "O5'" ? ? ? 1_555 F NA . NA ? ? A DT 7 A NA 105 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc17 metalc ? ? A DA 8 OP1 ? ? ? 1_555 C NA . NA ? ? A DA 8 A NA 102 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc18 metalc ? ? A DA 8 OP2 ? ? ? 1_555 C NA . NA ? ? A DA 8 A NA 102 1_555 ? ? ? ? ? ? ? 2.279 ? ? metalc19 metalc ? ? A DA 8 OP1 ? ? ? 1_555 F NA . NA ? ? A DA 8 A NA 105 1_555 ? ? ? ? ? ? ? 2.167 ? ? metalc20 metalc ? ? A DA 8 "O4'" ? ? ? 1_555 F NA . NA ? ? A DA 8 A NA 105 1_555 ? ? ? ? ? ? ? 2.568 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 1 A DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 1 A DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DA 8 N6 ? ? A DA 4 A DA 8 1_555 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? hydrog4 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DA 8 N1 ? ? A DT 5 A DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DA 8 N6 ? ? A DT 5 A DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DT 2 ? A DT 2 ? 1_555 NA ? D NA . ? A NA 103 ? 1_555 OP2 ? A DT 2 ? A DT 2 ? 1_555 66.3 ? 2 O4 ? A DT 2 ? A DT 2 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 OP1 ? A DT 7 ? A DT 7 ? 1_555 113.1 ? 3 O4 ? A DT 2 ? A DT 2 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O5'" ? A DT 7 ? A DT 7 ? 1_555 91.5 ? 4 OP1 ? A DT 7 ? A DT 7 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O5'" ? A DT 7 ? A DT 7 ? 1_555 61.1 ? 5 O4 ? A DT 2 ? A DT 2 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 OP1 ? A DA 8 ? A DA 8 ? 1_555 150.8 ? 6 OP1 ? A DT 7 ? A DT 7 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 OP1 ? A DA 8 ? A DA 8 ? 1_555 86.6 ? 7 "O5'" ? A DT 7 ? A DT 7 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 OP1 ? A DA 8 ? A DA 8 ? 1_555 79.1 ? 8 O4 ? A DT 2 ? A DT 2 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O4'" ? A DA 8 ? A DA 8 ? 1_555 85.2 ? 9 OP1 ? A DT 7 ? A DT 7 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O4'" ? A DA 8 ? A DA 8 ? 1_555 158.5 ? 10 "O5'" ? A DT 7 ? A DT 7 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O4'" ? A DA 8 ? A DA 8 ? 1_555 109.3 ? 11 OP1 ? A DA 8 ? A DA 8 ? 1_555 NA ? F NA . ? A NA 105 ? 1_555 "O4'" ? A DA 8 ? A DA 8 ? 1_555 72.3 ? 12 OP1 ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 OP2 ? A DT 3 ? A DT 3 ? 1_555 23.1 ? 13 OP1 ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 "O5'" ? A DT 3 ? A DT 3 ? 1_555 23.5 ? 14 OP2 ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 "O5'" ? A DT 3 ? A DT 3 ? 1_555 22.3 ? 15 OP1 ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 OP1 ? A DA 4 ? A DA 4 ? 1_555 27.9 ? 16 OP2 ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 OP1 ? A DA 4 ? A DA 4 ? 1_555 25.2 ? 17 "O5'" ? A DT 3 ? A DT 3 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 OP1 ? A DA 4 ? A DA 4 ? 1_555 4.5 ? 18 OP1 ? A DT 3 ? A DT 3 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 OP1 ? A DT 5 ? A DT 5 ? 1_555 24.7 ? 19 OP2 ? A DA 4 ? A DA 4 ? 1_555 NA ? G NA . ? A NA 106 ? 1_555 "O5'" ? A DA 4 ? A DA 4 ? 1_555 29.8 ? 20 OP1 ? A DT 6 ? A DT 6 ? 1_555 NA ? H NA . ? A NA 107 ? 1_555 OP2 ? A DT 6 ? A DT 6 ? 1_555 18.2 ? 21 OP2 ? A DT 7 ? A DT 7 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 OP1 ? A DA 8 ? A DA 8 ? 1_555 100.6 ? 22 OP2 ? A DT 7 ? A DT 7 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 OP2 ? A DA 8 ? A DA 8 ? 1_555 128.6 ? 23 OP1 ? A DA 8 ? A DA 8 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 OP2 ? A DA 8 ? A DA 8 ? 1_555 64.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 101 ? 2 'binding site for residue NA A 101' AC2 Software A NA 102 ? 2 'binding site for residue NA A 102' AC3 Software A NA 103 ? 1 'binding site for residue NA A 103' AC4 Software A NA 104 ? 3 'binding site for residue NA A 104' AC5 Software A NA 105 ? 3 'binding site for residue NA A 105' AC6 Software A NA 106 ? 2 'binding site for residue NA A 106' AC7 Software A NA 107 ? 1 'binding site for residue NA A 107' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DT A 3 ? DT A 3 . ? 1_555 ? 2 AC1 2 DA A 4 ? DA A 4 . ? 1_555 ? 3 AC2 2 DT A 7 ? DT A 7 . ? 1_555 ? 4 AC2 2 DA A 8 ? DA A 8 . ? 1_555 ? 5 AC3 1 DT A 2 ? DT A 2 . ? 1_555 ? 6 AC4 3 DT A 3 ? DT A 3 . ? 1_555 ? 7 AC4 3 DT A 5 ? DT A 5 . ? 1_555 ? 8 AC4 3 DT A 6 ? DT A 6 . ? 1_555 ? 9 AC5 3 DT A 2 ? DT A 2 . ? 1_555 ? 10 AC5 3 DT A 7 ? DT A 7 . ? 1_555 ? 11 AC5 3 DA A 8 ? DA A 8 . ? 1_555 ? 12 AC6 2 DT A 3 ? DT A 3 . ? 1_555 ? 13 AC6 2 DA A 4 ? DA A 4 . ? 1_555 ? 14 AC7 1 DT A 6 ? DT A 6 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.66 108.30 3.36 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.87 122.90 -4.03 0.60 N 3 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.81 122.90 -4.09 0.60 N 4 1 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.91 117.00 -3.09 0.50 N 5 1 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.15 118.60 -5.45 0.60 N 6 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.05 108.30 3.75 0.30 N 7 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.96 108.30 3.66 0.30 N 8 1 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.96 122.90 -3.94 0.60 N 9 1 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.98 106.00 3.98 0.60 N 10 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.95 108.30 3.65 0.30 N 11 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.84 122.90 -4.06 0.60 N 12 1 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 114.07 108.30 5.77 0.30 N 13 1 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.53 117.00 -3.47 0.50 N 14 1 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.51 132.30 4.21 0.70 N 15 1 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.79 118.60 -4.81 0.60 N 16 2 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.31 108.30 4.01 0.30 N 17 2 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.66 122.90 -4.24 0.60 N 18 2 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.37 122.90 -4.53 0.60 N 19 2 "C3'" A DA 4 ? ? "C2'" A DA 4 ? ? "C1'" A DA 4 ? ? 97.29 102.40 -5.11 0.80 N 20 2 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.11 108.30 2.81 0.30 N 21 2 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.76 117.00 -3.24 0.50 N 22 2 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.04 118.60 -5.56 0.60 N 23 2 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.16 108.30 3.86 0.30 N 24 2 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.45 108.30 4.15 0.30 N 25 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.27 108.30 3.97 0.30 N 26 2 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.29 122.90 -3.61 0.60 N 27 2 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.97 108.30 5.67 0.30 N 28 2 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.65 117.00 -3.35 0.50 N 29 2 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.18 118.60 -4.42 0.60 N 30 3 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.55 108.30 4.25 0.30 N 31 3 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.61 122.90 -4.29 0.60 N 32 3 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.73 122.90 -4.17 0.60 N 33 3 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.94 117.00 -3.06 0.50 N 34 3 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.31 118.60 -5.29 0.60 N 35 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.41 108.30 5.11 0.30 N 36 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.37 108.30 2.07 0.30 N 37 3 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.06 122.90 -3.84 0.60 N 38 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.50 108.30 5.20 0.30 N 39 3 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.82 122.90 -4.08 0.60 N 40 3 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.61 108.30 5.31 0.30 N 41 3 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.63 117.00 -3.37 0.50 N 42 3 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.71 118.60 -3.89 0.60 N 43 4 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.36 108.30 3.06 0.30 N 44 4 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.83 122.90 -4.07 0.60 N 45 4 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.34 122.90 -4.56 0.60 N 46 4 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.47 108.30 3.17 0.30 N 47 4 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.49 118.60 -4.11 0.60 N 48 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.45 108.30 5.15 0.30 N 49 4 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 97.60 102.40 -4.80 0.80 N 50 4 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.99 108.30 2.69 0.30 N 51 4 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.21 122.90 -3.69 0.60 N 52 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.19 108.30 2.89 0.30 N 53 4 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.44 108.30 5.14 0.30 N 54 4 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.44 117.00 -3.56 0.50 N 55 4 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.62 132.30 4.32 0.70 N 56 4 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.99 118.60 -4.61 0.60 N 57 5 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.80 108.30 3.50 0.30 N 58 5 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 112.58 108.30 4.28 0.30 N 59 5 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.16 122.90 -4.74 0.60 N 60 5 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.06 108.30 2.76 0.30 N 61 5 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.99 117.00 -3.01 0.50 N 62 5 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.68 118.60 -3.92 0.60 N 63 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.02 108.30 3.72 0.30 N 64 5 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.26 122.90 -3.64 0.60 N 65 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.44 108.30 5.14 0.30 N 66 5 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.99 122.90 -3.91 0.60 N 67 5 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.75 108.30 5.45 0.30 N 68 5 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.55 117.00 -3.45 0.50 N 69 5 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.14 118.60 -4.46 0.60 N 70 6 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.18 108.30 2.88 0.30 N 71 6 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.10 122.90 -4.80 0.60 N 72 6 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.20 122.90 -3.70 0.60 N 73 6 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.75 122.90 -4.15 0.60 N 74 6 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 112.22 108.30 3.92 0.30 N 75 6 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.98 118.60 -4.62 0.60 N 76 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.50 108.30 5.20 0.30 N 77 6 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.79 108.30 3.49 0.30 N 78 6 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.91 106.00 3.91 0.60 N 79 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.96 108.30 3.66 0.30 N 80 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.99 122.90 -3.91 0.60 N 81 6 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 114.00 108.30 5.70 0.30 N 82 6 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.62 117.00 -3.38 0.50 N 83 6 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.28 118.60 -4.32 0.60 N 84 7 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.12 122.90 -4.78 0.60 N 85 7 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.10 108.30 2.80 0.30 N 86 7 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.06 122.90 -4.84 0.60 N 87 7 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.54 118.60 -5.06 0.60 N 88 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.79 108.30 2.49 0.30 N 89 7 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.44 108.30 3.14 0.30 N 90 7 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.91 106.00 3.91 0.60 N 91 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.22 108.30 3.92 0.30 N 92 7 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.10 122.90 -3.80 0.60 N 93 7 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.78 108.30 5.48 0.30 N 94 7 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.54 117.00 -3.46 0.50 N 95 7 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.84 118.60 -4.76 0.60 N 96 8 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.74 108.30 2.44 0.30 N 97 8 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.28 122.90 -4.62 0.60 N 98 8 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.24 108.30 2.94 0.30 N 99 8 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.27 122.90 -4.63 0.60 N 100 8 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 110.78 108.30 2.48 0.30 N 101 8 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.65 118.60 -3.95 0.60 N 102 8 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.62 108.30 4.32 0.30 N 103 8 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 110.16 106.00 4.16 0.60 N 104 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.82 108.30 3.52 0.30 N 105 8 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.88 122.90 -4.02 0.60 N 106 8 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.59 108.30 5.29 0.30 N 107 8 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.42 117.00 -3.58 0.50 N 108 8 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.56 132.30 4.26 0.70 N 109 8 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.20 118.60 -5.40 0.60 N 110 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.52 108.30 4.22 0.30 N 111 9 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.64 122.90 -4.26 0.60 N 112 9 "C5'" A DT 3 ? ? "C4'" A DT 3 ? ? "O4'" A DT 3 ? ? 117.72 109.80 7.92 1.10 N 113 9 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.03 108.30 2.73 0.30 N 114 9 C4 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 122.75 119.00 3.75 0.60 N 115 9 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 116.74 122.90 -6.16 0.60 N 116 9 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 113.72 108.30 5.42 0.30 N 117 9 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.64 108.30 4.34 0.30 N 118 9 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.62 106.00 3.62 0.60 N 119 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.55 108.30 5.25 0.30 N 120 9 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.17 122.90 -3.73 0.60 N 121 9 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.84 108.30 5.54 0.30 N 122 9 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.64 117.00 -3.36 0.50 N 123 9 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.77 118.60 -3.83 0.60 N 124 10 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.12 108.30 3.82 0.30 N 125 10 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.02 122.90 -3.88 0.60 N 126 10 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 112.24 108.30 3.94 0.30 N 127 10 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.96 122.90 -3.94 0.60 N 128 10 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 112.70 108.30 4.40 0.30 N 129 10 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.83 118.60 -4.77 0.60 N 130 10 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.99 108.30 4.69 0.30 N 131 10 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.23 108.30 2.93 0.30 N 132 10 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.97 106.00 3.97 0.60 N 133 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.81 108.30 3.51 0.30 N 134 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.14 122.90 -3.76 0.60 N 135 10 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 114.16 108.30 5.86 0.30 N 136 10 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.66 117.00 -3.34 0.50 N 137 10 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.75 118.60 -3.85 0.60 N 138 11 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.21 108.30 1.91 0.30 N 139 11 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.13 122.90 -4.77 0.60 N 140 11 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.64 108.30 2.34 0.30 N 141 11 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.24 122.90 -4.66 0.60 N 142 11 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 110.45 108.30 2.15 0.30 N 143 11 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.78 117.00 -3.22 0.50 N 144 11 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.17 118.60 -5.43 0.60 N 145 11 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.49 108.30 4.19 0.30 N 146 11 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.10 108.30 2.80 0.30 N 147 11 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 110.74 106.00 4.74 0.60 N 148 11 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.37 108.30 3.07 0.30 N 149 11 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.79 122.90 -4.11 0.60 N 150 11 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.35 108.30 5.05 0.30 N 151 11 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.25 117.00 -3.75 0.50 N 152 11 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 137.04 132.30 4.74 0.70 N 153 11 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.75 118.60 -5.85 0.60 N 154 12 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.31 108.30 2.01 0.30 N 155 12 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.42 122.90 -4.48 0.60 N 156 12 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.96 108.30 3.66 0.30 N 157 12 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.53 122.90 -4.37 0.60 N 158 12 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.59 108.30 3.29 0.30 N 159 12 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.33 118.60 -4.27 0.60 N 160 12 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.05 108.30 4.75 0.30 N 161 12 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.86 108.30 2.56 0.30 N 162 12 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 110.60 106.00 4.60 0.60 N 163 12 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.75 108.30 3.45 0.30 N 164 12 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.86 122.90 -4.04 0.60 N 165 12 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.55 108.30 5.25 0.30 N 166 12 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.36 117.00 -3.64 0.50 N 167 12 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.69 132.30 4.39 0.70 N 168 12 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.30 118.60 -5.30 0.60 N 169 13 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.65 108.30 2.35 0.30 N 170 13 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.10 122.90 -3.80 0.60 N 171 13 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 113.32 108.30 5.02 0.30 N 172 13 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.30 122.90 -3.60 0.60 N 173 13 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.90 108.30 3.60 0.30 N 174 13 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.64 108.30 3.34 0.30 N 175 13 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.56 108.30 2.26 0.30 N 176 13 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 110.36 106.00 4.36 0.60 N 177 13 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.93 108.30 3.63 0.30 N 178 13 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.10 122.90 -3.80 0.60 N 179 13 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 112.78 108.30 4.48 0.30 N 180 13 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.11 117.00 -3.89 0.50 N 181 13 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.98 132.30 4.68 0.70 N 182 13 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.95 118.60 -4.65 0.60 N 183 14 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.52 108.30 3.22 0.30 N 184 14 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.69 122.90 -4.21 0.60 N 185 14 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.02 108.30 2.72 0.30 N 186 14 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.51 122.90 -4.39 0.60 N 187 14 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.21 108.30 2.91 0.30 N 188 14 C5 A DA 4 ? ? C6 A DA 4 ? ? N1 A DA 4 ? ? 120.79 117.70 3.09 0.50 N 189 14 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.11 108.30 4.81 0.30 N 190 14 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.82 108.30 2.52 0.30 N 191 14 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.88 122.90 -4.02 0.60 N 192 14 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.14 108.30 3.84 0.30 N 193 14 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.84 108.30 5.54 0.30 N 194 14 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.62 117.00 -3.38 0.50 N 195 15 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.52 108.30 3.22 0.30 N 196 15 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.23 122.90 -3.67 0.60 N 197 15 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.80 108.30 3.50 0.30 N 198 15 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.41 108.30 4.11 0.30 N 199 15 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.66 108.30 3.36 0.30 N 200 15 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.99 106.00 3.99 0.60 N 201 15 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.65 108.30 3.35 0.30 N 202 15 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.68 108.30 5.38 0.30 N 203 15 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.54 117.00 -3.46 0.50 N 204 15 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.54 118.60 -4.06 0.60 N 205 16 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.62 108.30 3.32 0.30 N 206 16 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.30 122.90 -4.60 0.60 N 207 16 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.23 122.90 -3.67 0.60 N 208 16 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.25 122.90 -4.65 0.60 N 209 16 "C1'" A DA 4 ? ? "O4'" A DA 4 ? ? "C4'" A DA 4 ? ? 102.79 110.10 -7.31 1.00 N 210 16 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.53 108.30 3.23 0.30 N 211 16 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.59 118.60 -4.01 0.60 N 212 16 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.71 108.30 3.41 0.30 N 213 16 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.63 108.30 3.33 0.30 N 214 16 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 110.85 106.00 4.85 0.60 N 215 16 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.47 108.30 3.17 0.30 N 216 16 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.99 122.90 -3.91 0.60 N 217 16 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 112.69 108.30 4.39 0.30 N 218 16 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.12 117.00 -3.88 0.50 N 219 16 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 137.05 132.30 4.75 0.70 N 220 16 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.89 118.60 -4.71 0.60 N 221 17 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.29 108.30 3.99 0.30 N 222 17 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.26 108.30 1.96 0.30 N 223 17 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.23 122.90 -3.67 0.60 N 224 17 "C3'" A DA 4 ? ? "C2'" A DA 4 ? ? "C1'" A DA 4 ? ? 95.79 102.40 -6.61 0.80 N 225 17 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 110.51 108.30 2.21 0.30 N 226 17 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 113.47 117.00 -3.53 0.50 N 227 17 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 112.69 118.60 -5.91 0.60 N 228 17 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 97.38 102.40 -5.02 0.80 N 229 17 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.23 108.30 2.93 0.30 N 230 17 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.56 108.30 3.26 0.30 N 231 17 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 113.75 108.30 5.45 0.30 N 232 17 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.62 117.00 -3.38 0.50 N 233 17 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.68 132.30 4.38 0.70 N 234 17 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.20 118.60 -4.40 0.60 N 235 18 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 117.84 122.90 -5.06 0.60 N 236 18 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.71 108.30 3.41 0.30 N 237 18 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.66 122.90 -4.24 0.60 N 238 18 "C3'" A DA 4 ? ? "C2'" A DA 4 ? ? "C1'" A DA 4 ? ? 96.94 102.40 -5.46 0.80 N 239 18 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.68 108.30 3.38 0.30 N 240 18 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 114.49 118.60 -4.11 0.60 N 241 18 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.24 108.30 2.94 0.30 N 242 18 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.36 108.30 4.06 0.30 N 243 18 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.73 106.00 3.73 0.60 N 244 18 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.08 108.30 3.78 0.30 N 245 18 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.96 122.90 -3.94 0.60 N 246 18 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.36 117.00 -3.64 0.50 N 247 18 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.65 132.30 4.35 0.70 N 248 18 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.73 118.60 -4.87 0.60 N 249 19 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.37 108.30 4.07 0.30 N 250 19 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.08 122.90 -3.82 0.60 N 251 19 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.44 122.90 -5.46 0.60 N 252 19 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 111.79 108.30 3.49 0.30 N 253 19 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 113.53 118.60 -5.07 0.60 N 254 19 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.40 108.30 3.10 0.30 N 255 19 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.62 108.30 2.32 0.30 N 256 19 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.08 108.30 4.78 0.30 N 257 19 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.82 122.90 -4.08 0.60 N 258 19 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 114.11 108.30 5.81 0.30 N 259 19 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.62 117.00 -3.38 0.50 N 260 19 C6 A DA 8 ? ? C5 A DA 8 ? ? N7 A DA 8 ? ? 136.61 132.30 4.31 0.70 N 261 19 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.20 118.60 -5.40 0.60 N 262 20 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.11 108.30 2.81 0.30 N 263 20 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.45 122.90 -4.45 0.60 N 264 20 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.07 108.30 2.77 0.30 N 265 20 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 118.77 122.90 -4.13 0.60 N 266 20 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 112.53 108.30 4.23 0.30 N 267 20 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.79 108.30 4.49 0.30 N 268 20 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 109.60 106.00 3.60 0.60 N 269 20 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.42 108.30 5.12 0.30 N 270 20 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.14 122.90 -3.76 0.60 N 271 20 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 114.05 108.30 5.75 0.30 N 272 20 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.68 117.00 -3.32 0.50 N 273 20 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 114.44 118.60 -4.16 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 2 ? ? 0.083 'SIDE CHAIN' 2 1 DA A 4 ? ? 0.108 'SIDE CHAIN' 3 1 DT A 5 ? ? 0.101 'SIDE CHAIN' 4 1 DT A 6 ? ? 0.067 'SIDE CHAIN' 5 2 DT A 2 ? ? 0.071 'SIDE CHAIN' 6 2 DA A 4 ? ? 0.070 'SIDE CHAIN' 7 3 DT A 2 ? ? 0.101 'SIDE CHAIN' 8 3 DA A 4 ? ? 0.076 'SIDE CHAIN' 9 4 DT A 2 ? ? 0.065 'SIDE CHAIN' 10 4 DA A 8 ? ? 0.108 'SIDE CHAIN' 11 5 DT A 2 ? ? 0.096 'SIDE CHAIN' 12 5 DT A 5 ? ? 0.079 'SIDE CHAIN' 13 6 DT A 2 ? ? 0.069 'SIDE CHAIN' 14 6 DT A 5 ? ? 0.083 'SIDE CHAIN' 15 7 DT A 3 ? ? 0.056 'SIDE CHAIN' 16 7 DA A 4 ? ? 0.075 'SIDE CHAIN' 17 7 DT A 5 ? ? 0.079 'SIDE CHAIN' 18 7 DT A 6 ? ? 0.073 'SIDE CHAIN' 19 8 DT A 2 ? ? 0.080 'SIDE CHAIN' 20 8 DA A 4 ? ? 0.070 'SIDE CHAIN' 21 8 DT A 6 ? ? 0.151 'SIDE CHAIN' 22 9 DT A 2 ? ? 0.064 'SIDE CHAIN' 23 10 DT A 2 ? ? 0.071 'SIDE CHAIN' 24 10 DT A 3 ? ? 0.074 'SIDE CHAIN' 25 10 DT A 5 ? ? 0.073 'SIDE CHAIN' 26 11 DT A 2 ? ? 0.073 'SIDE CHAIN' 27 11 DA A 4 ? ? 0.090 'SIDE CHAIN' 28 11 DT A 5 ? ? 0.073 'SIDE CHAIN' 29 11 DT A 6 ? ? 0.092 'SIDE CHAIN' 30 12 DT A 2 ? ? 0.077 'SIDE CHAIN' 31 12 DA A 4 ? ? 0.078 'SIDE CHAIN' 32 12 DT A 6 ? ? 0.079 'SIDE CHAIN' 33 13 DT A 2 ? ? 0.088 'SIDE CHAIN' 34 14 DT A 2 ? ? 0.095 'SIDE CHAIN' 35 14 DA A 8 ? ? 0.070 'SIDE CHAIN' 36 15 DT A 2 ? ? 0.089 'SIDE CHAIN' 37 15 DT A 5 ? ? 0.084 'SIDE CHAIN' 38 16 DT A 2 ? ? 0.076 'SIDE CHAIN' 39 17 DT A 3 ? ? 0.058 'SIDE CHAIN' 40 17 DA A 4 ? ? 0.125 'SIDE CHAIN' 41 17 DT A 5 ? ? 0.111 'SIDE CHAIN' 42 17 DA A 8 ? ? 0.116 'SIDE CHAIN' 43 18 DT A 2 ? ? 0.083 'SIDE CHAIN' 44 18 DA A 4 ? ? 0.119 'SIDE CHAIN' 45 18 DA A 8 ? ? 0.119 'SIDE CHAIN' 46 19 DT A 2 ? ? 0.065 'SIDE CHAIN' 47 19 DA A 4 ? ? 0.098 'SIDE CHAIN' 48 20 DT A 2 ? ? 0.115 'SIDE CHAIN' 49 20 DT A 3 ? ? 0.071 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 5GWQ _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5GWQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1.0 mM DNA (5'-D(*TP*TP*TP*AP*TP*TP*TP*A)-3'), 10 mM sodium phosphate, 0.1 mM DSS, 100% D2O ; _pdbx_nmr_sample_details.solvent_system '100% D2O' _pdbx_nmr_sample_details.label 1H _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*TP*TP*TP*AP*TP*TP*TP*A)-3') ; 1.0 ? mM 'natural abundance' 1 'sodium phosphate' 10 ? mM 'natural abundance' 1 DSS 0.1 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 278 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.02 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units M _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D NOESY' 1 isotropic 2 1 1 '2D DQF-COSY' 2 isotropic # _pdbx_nmr_refine.entry_id 5GWQ _pdbx_nmr_refine.method 'restrained molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing TopSpin ? 'Bruker Biospin' 2 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DT OP3 O N N 37 DT P P N N 38 DT OP1 O N N 39 DT OP2 O N N 40 DT "O5'" O N N 41 DT "C5'" C N N 42 DT "C4'" C N R 43 DT "O4'" O N N 44 DT "C3'" C N S 45 DT "O3'" O N N 46 DT "C2'" C N N 47 DT "C1'" C N R 48 DT N1 N N N 49 DT C2 C N N 50 DT O2 O N N 51 DT N3 N N N 52 DT C4 C N N 53 DT O4 O N N 54 DT C5 C N N 55 DT C7 C N N 56 DT C6 C N N 57 DT HOP3 H N N 58 DT HOP2 H N N 59 DT "H5'" H N N 60 DT "H5''" H N N 61 DT "H4'" H N N 62 DT "H3'" H N N 63 DT "HO3'" H N N 64 DT "H2'" H N N 65 DT "H2''" H N N 66 DT "H1'" H N N 67 DT H3 H N N 68 DT H71 H N N 69 DT H72 H N N 70 DT H73 H N N 71 DT H6 H N N 72 NA NA NA N N 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DT OP3 P sing N N 39 DT OP3 HOP3 sing N N 40 DT P OP1 doub N N 41 DT P OP2 sing N N 42 DT P "O5'" sing N N 43 DT OP2 HOP2 sing N N 44 DT "O5'" "C5'" sing N N 45 DT "C5'" "C4'" sing N N 46 DT "C5'" "H5'" sing N N 47 DT "C5'" "H5''" sing N N 48 DT "C4'" "O4'" sing N N 49 DT "C4'" "C3'" sing N N 50 DT "C4'" "H4'" sing N N 51 DT "O4'" "C1'" sing N N 52 DT "C3'" "O3'" sing N N 53 DT "C3'" "C2'" sing N N 54 DT "C3'" "H3'" sing N N 55 DT "O3'" "HO3'" sing N N 56 DT "C2'" "C1'" sing N N 57 DT "C2'" "H2'" sing N N 58 DT "C2'" "H2''" sing N N 59 DT "C1'" N1 sing N N 60 DT "C1'" "H1'" sing N N 61 DT N1 C2 sing N N 62 DT N1 C6 sing N N 63 DT C2 O2 doub N N 64 DT C2 N3 sing N N 65 DT N3 C4 sing N N 66 DT N3 H3 sing N N 67 DT C4 O4 doub N N 68 DT C4 C5 sing N N 69 DT C5 C7 sing N N 70 DT C5 C6 doub N N 71 DT C7 H71 sing N N 72 DT C7 H72 sing N N 73 DT C7 H73 sing N N 74 DT C6 H6 sing N N 75 # _ndb_struct_conf_na.entry_id 5GWQ _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 A DA 4 1_555 0.344 -0.154 -0.604 -7.251 11.051 -7.156 1 A_DT1:DA4_A A 1 ? A 4 ? 20 1 1 A DA 8 1_555 A DT 5 1_555 -0.344 -0.295 -1.141 14.542 5.581 -5.395 2 A_DA8:DT5_A A 8 ? A 5 ? 20 1 # _ndb_struct_na_base_pair_step.model_number 1 _ndb_struct_na_base_pair_step.i_label_asym_id_1 A _ndb_struct_na_base_pair_step.i_label_comp_id_1 DT _ndb_struct_na_base_pair_step.i_label_seq_id_1 1 _ndb_struct_na_base_pair_step.i_symmetry_1 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_1 A _ndb_struct_na_base_pair_step.j_label_comp_id_1 DA _ndb_struct_na_base_pair_step.j_label_seq_id_1 4 _ndb_struct_na_base_pair_step.j_symmetry_1 1_555 _ndb_struct_na_base_pair_step.i_label_asym_id_2 A _ndb_struct_na_base_pair_step.i_label_comp_id_2 DA _ndb_struct_na_base_pair_step.i_label_seq_id_2 8 _ndb_struct_na_base_pair_step.i_symmetry_2 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_2 A _ndb_struct_na_base_pair_step.j_label_comp_id_2 DT _ndb_struct_na_base_pair_step.j_label_seq_id_2 5 _ndb_struct_na_base_pair_step.j_symmetry_2 1_555 _ndb_struct_na_base_pair_step.shift 1.278 _ndb_struct_na_base_pair_step.slide 1.055 _ndb_struct_na_base_pair_step.rise 2.981 _ndb_struct_na_base_pair_step.tilt 6.790 _ndb_struct_na_base_pair_step.roll 1.229 _ndb_struct_na_base_pair_step.twist 22.012 _ndb_struct_na_base_pair_step.x_displacement 2.218 _ndb_struct_na_base_pair_step.y_displacement -0.868 _ndb_struct_na_base_pair_step.helical_rise 3.275 _ndb_struct_na_base_pair_step.inclination 3.121 _ndb_struct_na_base_pair_step.tip -17.245 _ndb_struct_na_base_pair_step.helical_twist 23.056 _ndb_struct_na_base_pair_step.step_number 1 _ndb_struct_na_base_pair_step.step_name AA_DT1DA8:DT5DA4_AA _ndb_struct_na_base_pair_step.i_auth_asym_id_1 A _ndb_struct_na_base_pair_step.i_auth_seq_id_1 1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_1 A _ndb_struct_na_base_pair_step.j_auth_seq_id_1 4 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.i_auth_asym_id_2 A _ndb_struct_na_base_pair_step.i_auth_seq_id_2 8 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_2 A _ndb_struct_na_base_pair_step.j_auth_seq_id_2 5 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 ? # _pdbx_audit_support.funding_organization 'Research Grants Council of HKSAR' _pdbx_audit_support.country 'Hong Kong' _pdbx_audit_support.grant_number 'GRF CUHK14302114 and CUHK14302915' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 700 ? 2 'AVANCE II' ? Bruker 500 ? # _atom_sites.entry_id 5GWQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N NA O P # loop_