data_5GZ9 # _entry.id 5GZ9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GZ9 pdb_00005gz9 10.2210/pdb5gz9/pdb WWPDB D_1300001710 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5GZ8 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GZ9 _pdbx_database_status.recvd_initial_deposition_date 2016-09-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagae, M.' 1 'Yamaguchi, Y.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Genes Cells' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1365-2443 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 22 _citation.language ? _citation.page_first 348 _citation.page_last 359 _citation.title '3D structural analysis of protein O-mannosyl kinase, POMK, a causative gene product of dystroglycanopathy.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/gtc.12480 _citation.pdbx_database_id_PubMed 28251761 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagae, M.' 1 ? primary 'Mishra, S.K.' 2 ? primary 'Neyazaki, M.' 3 ? primary 'Oi, R.' 4 ? primary 'Ikeda, A.' 5 ? primary 'Matsugaki, N.' 6 ? primary 'Akashi, S.' 7 ? primary 'Manya, H.' 8 ? primary 'Mizuno, M.' 9 ? primary 'Yagi, H.' 10 ? primary 'Kato, K.' 11 ? primary 'Senda, T.' 12 ? primary 'Endo, T.' 13 ? primary 'Nogi, T.' 14 ? primary 'Yamaguchi, Y.' 15 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5GZ9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 81.320 _cell.length_a_esd ? _cell.length_b 81.320 _cell.length_b_esd ? _cell.length_c 146.838 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein O-mannose kinase' 35213.105 1 2.7.1.- 'N66Q, N164Q' 'UNP RESIDUES 45-349' ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 5 water nat water 18.015 32 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'POMK,Protein kinase-like protein SgK196,Sugen kinase 196' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GRSTADSRRCPPGYFRMGRMRQCSRWLSCEELRTEVRQLKRVGEGAVKRVFLSEWKEHKVALSRLTRLEMKEDFLHGLQM LKSLQSEHVVTLVGYCEEDGTILTEYHPLGSLSNLEETLQLSKYQDVNTWQHRLQLAMEYVSIINYLHHSPLGTRVMCDS NDLPKTLSQYLLTSNFSIVANDLDALPLVDHDSGVLIKCGHRELHGDFVAPEQLWPYGEDTPFQDDLMPSYNEKVDIWKI PDVSSFLLGHVEGSDMVRFHLFDIHKACKSQIPAERPTAQNVLDAYQRVFHSLRDTVMSQTKEML ; _entity_poly.pdbx_seq_one_letter_code_can ;GRSTADSRRCPPGYFRMGRMRQCSRWLSCEELRTEVRQLKRVGEGAVKRVFLSEWKEHKVALSRLTRLEMKEDFLHGLQM LKSLQSEHVVTLVGYCEEDGTILTEYHPLGSLSNLEETLQLSKYQDVNTWQHRLQLAMEYVSIINYLHHSPLGTRVMCDS NDLPKTLSQYLLTSNFSIVANDLDALPLVDHDSGVLIKCGHRELHGDFVAPEQLWPYGEDTPFQDDLMPSYNEKVDIWKI PDVSSFLLGHVEGSDMVRFHLFDIHKACKSQIPAERPTAQNVLDAYQRVFHSLRDTVMSQTKEML ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 SER n 1 4 THR n 1 5 ALA n 1 6 ASP n 1 7 SER n 1 8 ARG n 1 9 ARG n 1 10 CYS n 1 11 PRO n 1 12 PRO n 1 13 GLY n 1 14 TYR n 1 15 PHE n 1 16 ARG n 1 17 MET n 1 18 GLY n 1 19 ARG n 1 20 MET n 1 21 ARG n 1 22 GLN n 1 23 CYS n 1 24 SER n 1 25 ARG n 1 26 TRP n 1 27 LEU n 1 28 SER n 1 29 CYS n 1 30 GLU n 1 31 GLU n 1 32 LEU n 1 33 ARG n 1 34 THR n 1 35 GLU n 1 36 VAL n 1 37 ARG n 1 38 GLN n 1 39 LEU n 1 40 LYS n 1 41 ARG n 1 42 VAL n 1 43 GLY n 1 44 GLU n 1 45 GLY n 1 46 ALA n 1 47 VAL n 1 48 LYS n 1 49 ARG n 1 50 VAL n 1 51 PHE n 1 52 LEU n 1 53 SER n 1 54 GLU n 1 55 TRP n 1 56 LYS n 1 57 GLU n 1 58 HIS n 1 59 LYS n 1 60 VAL n 1 61 ALA n 1 62 LEU n 1 63 SER n 1 64 ARG n 1 65 LEU n 1 66 THR n 1 67 ARG n 1 68 LEU n 1 69 GLU n 1 70 MET n 1 71 LYS n 1 72 GLU n 1 73 ASP n 1 74 PHE n 1 75 LEU n 1 76 HIS n 1 77 GLY n 1 78 LEU n 1 79 GLN n 1 80 MET n 1 81 LEU n 1 82 LYS n 1 83 SER n 1 84 LEU n 1 85 GLN n 1 86 SER n 1 87 GLU n 1 88 HIS n 1 89 VAL n 1 90 VAL n 1 91 THR n 1 92 LEU n 1 93 VAL n 1 94 GLY n 1 95 TYR n 1 96 CYS n 1 97 GLU n 1 98 GLU n 1 99 ASP n 1 100 GLY n 1 101 THR n 1 102 ILE n 1 103 LEU n 1 104 THR n 1 105 GLU n 1 106 TYR n 1 107 HIS n 1 108 PRO n 1 109 LEU n 1 110 GLY n 1 111 SER n 1 112 LEU n 1 113 SER n 1 114 ASN n 1 115 LEU n 1 116 GLU n 1 117 GLU n 1 118 THR n 1 119 LEU n 1 120 GLN n 1 121 LEU n 1 122 SER n 1 123 LYS n 1 124 TYR n 1 125 GLN n 1 126 ASP n 1 127 VAL n 1 128 ASN n 1 129 THR n 1 130 TRP n 1 131 GLN n 1 132 HIS n 1 133 ARG n 1 134 LEU n 1 135 GLN n 1 136 LEU n 1 137 ALA n 1 138 MET n 1 139 GLU n 1 140 TYR n 1 141 VAL n 1 142 SER n 1 143 ILE n 1 144 ILE n 1 145 ASN n 1 146 TYR n 1 147 LEU n 1 148 HIS n 1 149 HIS n 1 150 SER n 1 151 PRO n 1 152 LEU n 1 153 GLY n 1 154 THR n 1 155 ARG n 1 156 VAL n 1 157 MET n 1 158 CYS n 1 159 ASP n 1 160 SER n 1 161 ASN n 1 162 ASP n 1 163 LEU n 1 164 PRO n 1 165 LYS n 1 166 THR n 1 167 LEU n 1 168 SER n 1 169 GLN n 1 170 TYR n 1 171 LEU n 1 172 LEU n 1 173 THR n 1 174 SER n 1 175 ASN n 1 176 PHE n 1 177 SER n 1 178 ILE n 1 179 VAL n 1 180 ALA n 1 181 ASN n 1 182 ASP n 1 183 LEU n 1 184 ASP n 1 185 ALA n 1 186 LEU n 1 187 PRO n 1 188 LEU n 1 189 VAL n 1 190 ASP n 1 191 HIS n 1 192 ASP n 1 193 SER n 1 194 GLY n 1 195 VAL n 1 196 LEU n 1 197 ILE n 1 198 LYS n 1 199 CYS n 1 200 GLY n 1 201 HIS n 1 202 ARG n 1 203 GLU n 1 204 LEU n 1 205 HIS n 1 206 GLY n 1 207 ASP n 1 208 PHE n 1 209 VAL n 1 210 ALA n 1 211 PRO n 1 212 GLU n 1 213 GLN n 1 214 LEU n 1 215 TRP n 1 216 PRO n 1 217 TYR n 1 218 GLY n 1 219 GLU n 1 220 ASP n 1 221 THR n 1 222 PRO n 1 223 PHE n 1 224 GLN n 1 225 ASP n 1 226 ASP n 1 227 LEU n 1 228 MET n 1 229 PRO n 1 230 SER n 1 231 TYR n 1 232 ASN n 1 233 GLU n 1 234 LYS n 1 235 VAL n 1 236 ASP n 1 237 ILE n 1 238 TRP n 1 239 LYS n 1 240 ILE n 1 241 PRO n 1 242 ASP n 1 243 VAL n 1 244 SER n 1 245 SER n 1 246 PHE n 1 247 LEU n 1 248 LEU n 1 249 GLY n 1 250 HIS n 1 251 VAL n 1 252 GLU n 1 253 GLY n 1 254 SER n 1 255 ASP n 1 256 MET n 1 257 VAL n 1 258 ARG n 1 259 PHE n 1 260 HIS n 1 261 LEU n 1 262 PHE n 1 263 ASP n 1 264 ILE n 1 265 HIS n 1 266 LYS n 1 267 ALA n 1 268 CYS n 1 269 LYS n 1 270 SER n 1 271 GLN n 1 272 ILE n 1 273 PRO n 1 274 ALA n 1 275 GLU n 1 276 ARG n 1 277 PRO n 1 278 THR n 1 279 ALA n 1 280 GLN n 1 281 ASN n 1 282 VAL n 1 283 LEU n 1 284 ASP n 1 285 ALA n 1 286 TYR n 1 287 GLN n 1 288 ARG n 1 289 VAL n 1 290 PHE n 1 291 HIS n 1 292 SER n 1 293 LEU n 1 294 ARG n 1 295 ASP n 1 296 THR n 1 297 VAL n 1 298 MET n 1 299 SER n 1 300 GLN n 1 301 THR n 1 302 LYS n 1 303 GLU n 1 304 MET n 1 305 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 305 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Pomk, Sgk196' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Expi293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SG196_MOUSE _struct_ref.pdbx_db_accession Q3TUA9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GRSTADSRRCPPGYFRMGRMRNCSRWLSCEELRTEVRQLKRVGEGAVKRVFLSEWKEHKVALSRLTRLEMKEDFLHGLQM LKSLQSEHVVTLVGYCEEDGTILTEYHPLGSLSNLEETLNLSKYQDVNTWQHRLQLAMEYVSIINYLHHSPLGTRVMCDS NDLPKTLSQYLLTSNFSIVANDLDALPLVDHDSGVLIKCGHRELHGDFVAPEQLWPYGEDTPFQDDLMPSYNEKVDIWKI PDVSSFLLGHVEGSDMVRFHLFDIHKACKSQIPAERPTAQNVLDAYQRVFHSLRDTVMSQTKEML ; _struct_ref.pdbx_align_begin 45 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GZ9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 305 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3TUA9 _struct_ref_seq.db_align_beg 45 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 349 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 45 _struct_ref_seq.pdbx_auth_seq_align_end 349 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GZ9 GLN A 22 ? UNP Q3TUA9 ASN 66 'engineered mutation' 66 1 1 5GZ9 GLN A 120 ? UNP Q3TUA9 ASN 164 'engineered mutation' 164 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GZ9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.98 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Tris-HCl (pH 8.5), 23% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-07-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL26B2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL26B2 _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GZ9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 100 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 249333 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.152 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.742 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GZ9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4 _refine.ls_d_res_low 40.192 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22634 _refine.ls_number_reflns_R_free 1137 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.96 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2338 _refine.ls_R_factor_R_free 0.2684 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2320 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5GZ8 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.24 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2270 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 2347 _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 40.192 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 ? 2380 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.171 ? 3219 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.624 ? 1426 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.060 ? 355 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 405 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3989 2.5080 . . 150 2607 100.00 . . . 0.3669 . 0.2687 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5080 2.6402 . . 133 2642 100.00 . . . 0.3060 . 0.2588 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6402 2.8056 . . 130 2676 100.00 . . . 0.3333 . 0.2604 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8056 3.0222 . . 144 2644 100.00 . . . 0.3086 . 0.2606 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0222 3.3262 . . 161 2640 100.00 . . . 0.3045 . 0.2493 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3262 3.8072 . . 152 2686 100.00 . . . 0.2436 . 0.2189 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8072 4.7954 . . 139 2741 100.00 . . . 0.2175 . 0.1983 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.7954 40.1978 . . 128 2861 100.00 . . . 0.2306 . 0.2275 . . . . . . . . . . # _struct.entry_id 5GZ9 _struct.title 'Crystal structure of catalytic domain of Protein O-mannosyl Kinase in complexes with AMP-PNP, Magnesium ions and glycopeptide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GZ9 _struct_keywords.text 'Sugar Kinase, Dystroglycanopathy, O-mannosylation, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 28 ? VAL A 36 ? SER A 72 VAL A 80 1 ? 9 HELX_P HELX_P2 AA2 MET A 70 ? LEU A 84 ? MET A 114 LEU A 128 1 ? 15 HELX_P HELX_P3 AA3 SER A 111 ? SER A 113 ? SER A 155 SER A 157 5 ? 3 HELX_P HELX_P4 AA4 ASN A 114 ? LEU A 119 ? ASN A 158 LEU A 163 1 ? 6 HELX_P HELX_P5 AA5 THR A 129 ? HIS A 149 ? THR A 173 HIS A 193 1 ? 21 HELX_P HELX_P6 AA6 ASP A 162 ? GLN A 169 ? ASP A 206 GLN A 213 1 ? 8 HELX_P HELX_P7 AA7 ALA A 210 ? LEU A 214 ? ALA A 254 LEU A 258 5 ? 5 HELX_P HELX_P8 AA8 GLN A 224 ? MET A 228 ? GLN A 268 MET A 272 5 ? 5 HELX_P HELX_P9 AA9 GLU A 233 ? GLY A 249 ? GLU A 277 GLY A 293 1 ? 17 HELX_P HELX_P10 AB1 GLY A 253 ? LYS A 269 ? GLY A 297 LYS A 313 1 ? 17 HELX_P HELX_P11 AB2 ILE A 272 ? ARG A 276 ? ILE A 316 ARG A 320 5 ? 5 HELX_P HELX_P12 AB3 THR A 278 ? LEU A 293 ? THR A 322 LEU A 337 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 23 SG ? ? A CYS 54 A CYS 67 1_555 ? ? ? ? ? ? ? 2.095 ? ? disulf2 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 73 A CYS 140 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf3 disulf ? ? A CYS 158 SG ? ? ? 1_555 A CYS 199 SG ? ? A CYS 202 A CYS 243 1_555 ? ? ? ? ? ? ? 2.114 ? ? metalc1 metalc ? ? A GLN 169 OE1 ? ? ? 1_555 D MG . MG ? ? A GLN 213 A MG 1003 1_555 ? ? ? ? ? ? ? 2.626 ? ? metalc2 metalc ? ? A ASP 182 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 226 A MG 1002 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc3 metalc ? ? A ASP 182 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 226 A MG 1002 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc4 metalc ? ? B ANP . O2G ? ? ? 1_555 C MG . MG ? ? A ANP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc5 metalc ? ? B ANP . O1B ? ? ? 1_555 C MG . MG ? ? A ANP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc6 metalc ? ? B ANP . O1G ? ? ? 1_555 D MG . MG ? ? A ANP 1001 A MG 1003 1_555 ? ? ? ? ? ? ? 1.984 ? ? metalc7 metalc ? ? B ANP . O1A ? ? ? 1_555 D MG . MG ? ? A ANP 1001 A MG 1003 1_555 ? ? ? ? ? ? ? 2.102 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 44 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 45 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 14 ? PHE A 15 ? TYR A 58 PHE A 59 AA1 2 SER A 24 ? ARG A 25 ? SER A 68 ARG A 69 AA2 1 ARG A 37 ? GLU A 44 ? ARG A 81 GLU A 88 AA2 2 LYS A 48 ? TRP A 55 ? LYS A 92 TRP A 99 AA2 3 HIS A 58 ? LEU A 65 ? HIS A 102 LEU A 109 AA2 4 THR A 101 ? GLU A 105 ? THR A 145 GLU A 149 AA2 5 LEU A 92 ? CYS A 96 ? LEU A 136 CYS A 140 AA3 1 THR A 154 ? ARG A 155 ? THR A 198 ARG A 199 AA3 2 LEU A 188 ? VAL A 189 ? LEU A 232 VAL A 233 AA4 1 TYR A 170 ? LEU A 172 ? TYR A 214 LEU A 216 AA4 2 ILE A 178 ? ALA A 180 ? ILE A 222 ALA A 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 15 ? N PHE A 59 O SER A 24 ? O SER A 68 AA2 1 2 N VAL A 42 ? N VAL A 86 O VAL A 50 ? O VAL A 94 AA2 2 3 N ARG A 49 ? N ARG A 93 O ARG A 64 ? O ARG A 108 AA2 3 4 N ALA A 61 ? N ALA A 105 O THR A 104 ? O THR A 148 AA2 4 5 O LEU A 103 ? O LEU A 147 N GLY A 94 ? N GLY A 138 AA3 1 2 N THR A 154 ? N THR A 198 O VAL A 189 ? O VAL A 233 AA4 1 2 N LEU A 171 ? N LEU A 215 O VAL A 179 ? O VAL A 223 # _atom_sites.entry_id 5GZ9 _atom_sites.fract_transf_matrix[1][1] 0.012297 _atom_sites.fract_transf_matrix[1][2] 0.007100 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014199 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006810 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 45 ? ? ? A . n A 1 2 ARG 2 46 ? ? ? A . n A 1 3 SER 3 47 ? ? ? A . n A 1 4 THR 4 48 ? ? ? A . n A 1 5 ALA 5 49 ? ? ? A . n A 1 6 ASP 6 50 ? ? ? A . n A 1 7 SER 7 51 ? ? ? A . n A 1 8 ARG 8 52 ? ? ? A . n A 1 9 ARG 9 53 ? ? ? A . n A 1 10 CYS 10 54 54 CYS CYS A . n A 1 11 PRO 11 55 55 PRO PRO A . n A 1 12 PRO 12 56 56 PRO PRO A . n A 1 13 GLY 13 57 57 GLY GLY A . n A 1 14 TYR 14 58 58 TYR TYR A . n A 1 15 PHE 15 59 59 PHE PHE A . n A 1 16 ARG 16 60 60 ARG ARG A . n A 1 17 MET 17 61 61 MET MET A . n A 1 18 GLY 18 62 62 GLY GLY A . n A 1 19 ARG 19 63 63 ARG ARG A . n A 1 20 MET 20 64 64 MET MET A . n A 1 21 ARG 21 65 65 ARG ARG A . n A 1 22 GLN 22 66 66 GLN GLN A . n A 1 23 CYS 23 67 67 CYS CYS A . n A 1 24 SER 24 68 68 SER SER A . n A 1 25 ARG 25 69 69 ARG ARG A . n A 1 26 TRP 26 70 70 TRP TRP A . n A 1 27 LEU 27 71 71 LEU LEU A . n A 1 28 SER 28 72 72 SER SER A . n A 1 29 CYS 29 73 73 CYS CYS A . n A 1 30 GLU 30 74 74 GLU GLU A . n A 1 31 GLU 31 75 75 GLU GLU A . n A 1 32 LEU 32 76 76 LEU LEU A . n A 1 33 ARG 33 77 77 ARG ARG A . n A 1 34 THR 34 78 78 THR THR A . n A 1 35 GLU 35 79 79 GLU GLU A . n A 1 36 VAL 36 80 80 VAL VAL A . n A 1 37 ARG 37 81 81 ARG ARG A . n A 1 38 GLN 38 82 82 GLN GLN A . n A 1 39 LEU 39 83 83 LEU LEU A . n A 1 40 LYS 40 84 84 LYS LYS A . n A 1 41 ARG 41 85 85 ARG ARG A . n A 1 42 VAL 42 86 86 VAL VAL A . n A 1 43 GLY 43 87 87 GLY GLY A . n A 1 44 GLU 44 88 88 GLU GLU A . n A 1 45 GLY 45 89 89 GLY GLY A . n A 1 46 ALA 46 90 90 ALA ALA A . n A 1 47 VAL 47 91 91 VAL VAL A . n A 1 48 LYS 48 92 92 LYS LYS A . n A 1 49 ARG 49 93 93 ARG ARG A . n A 1 50 VAL 50 94 94 VAL VAL A . n A 1 51 PHE 51 95 95 PHE PHE A . n A 1 52 LEU 52 96 96 LEU LEU A . n A 1 53 SER 53 97 97 SER SER A . n A 1 54 GLU 54 98 98 GLU GLU A . n A 1 55 TRP 55 99 99 TRP TRP A . n A 1 56 LYS 56 100 100 LYS LYS A . n A 1 57 GLU 57 101 101 GLU GLU A . n A 1 58 HIS 58 102 102 HIS HIS A . n A 1 59 LYS 59 103 103 LYS LYS A . n A 1 60 VAL 60 104 104 VAL VAL A . n A 1 61 ALA 61 105 105 ALA ALA A . n A 1 62 LEU 62 106 106 LEU LEU A . n A 1 63 SER 63 107 107 SER SER A . n A 1 64 ARG 64 108 108 ARG ARG A . n A 1 65 LEU 65 109 109 LEU LEU A . n A 1 66 THR 66 110 110 THR THR A . n A 1 67 ARG 67 111 111 ARG ARG A . n A 1 68 LEU 68 112 112 LEU LEU A . n A 1 69 GLU 69 113 113 GLU GLU A . n A 1 70 MET 70 114 114 MET MET A . n A 1 71 LYS 71 115 115 LYS LYS A . n A 1 72 GLU 72 116 116 GLU GLU A . n A 1 73 ASP 73 117 117 ASP ASP A . n A 1 74 PHE 74 118 118 PHE PHE A . n A 1 75 LEU 75 119 119 LEU LEU A . n A 1 76 HIS 76 120 120 HIS HIS A . n A 1 77 GLY 77 121 121 GLY GLY A . n A 1 78 LEU 78 122 122 LEU LEU A . n A 1 79 GLN 79 123 123 GLN GLN A . n A 1 80 MET 80 124 124 MET MET A . n A 1 81 LEU 81 125 125 LEU LEU A . n A 1 82 LYS 82 126 126 LYS LYS A . n A 1 83 SER 83 127 127 SER SER A . n A 1 84 LEU 84 128 128 LEU LEU A . n A 1 85 GLN 85 129 129 GLN GLN A . n A 1 86 SER 86 130 130 SER SER A . n A 1 87 GLU 87 131 131 GLU GLU A . n A 1 88 HIS 88 132 132 HIS HIS A . n A 1 89 VAL 89 133 133 VAL VAL A . n A 1 90 VAL 90 134 134 VAL VAL A . n A 1 91 THR 91 135 135 THR THR A . n A 1 92 LEU 92 136 136 LEU LEU A . n A 1 93 VAL 93 137 137 VAL VAL A . n A 1 94 GLY 94 138 138 GLY GLY A . n A 1 95 TYR 95 139 139 TYR TYR A . n A 1 96 CYS 96 140 140 CYS CYS A . n A 1 97 GLU 97 141 141 GLU GLU A . n A 1 98 GLU 98 142 142 GLU GLU A . n A 1 99 ASP 99 143 143 ASP ASP A . n A 1 100 GLY 100 144 144 GLY GLY A . n A 1 101 THR 101 145 145 THR THR A . n A 1 102 ILE 102 146 146 ILE ILE A . n A 1 103 LEU 103 147 147 LEU LEU A . n A 1 104 THR 104 148 148 THR THR A . n A 1 105 GLU 105 149 149 GLU GLU A . n A 1 106 TYR 106 150 150 TYR TYR A . n A 1 107 HIS 107 151 151 HIS HIS A . n A 1 108 PRO 108 152 152 PRO PRO A . n A 1 109 LEU 109 153 153 LEU LEU A . n A 1 110 GLY 110 154 154 GLY GLY A . n A 1 111 SER 111 155 155 SER SER A . n A 1 112 LEU 112 156 156 LEU LEU A . n A 1 113 SER 113 157 157 SER SER A . n A 1 114 ASN 114 158 158 ASN ASN A . n A 1 115 LEU 115 159 159 LEU LEU A . n A 1 116 GLU 116 160 160 GLU GLU A . n A 1 117 GLU 117 161 161 GLU GLU A . n A 1 118 THR 118 162 162 THR THR A . n A 1 119 LEU 119 163 163 LEU LEU A . n A 1 120 GLN 120 164 164 GLN GLN A . n A 1 121 LEU 121 165 ? ? ? A . n A 1 122 SER 122 166 ? ? ? A . n A 1 123 LYS 123 167 167 LYS LYS A . n A 1 124 TYR 124 168 168 TYR TYR A . n A 1 125 GLN 125 169 169 GLN GLN A . n A 1 126 ASP 126 170 170 ASP ASP A . n A 1 127 VAL 127 171 171 VAL VAL A . n A 1 128 ASN 128 172 172 ASN ASN A . n A 1 129 THR 129 173 173 THR THR A . n A 1 130 TRP 130 174 174 TRP TRP A . n A 1 131 GLN 131 175 175 GLN GLN A . n A 1 132 HIS 132 176 176 HIS HIS A . n A 1 133 ARG 133 177 177 ARG ARG A . n A 1 134 LEU 134 178 178 LEU LEU A . n A 1 135 GLN 135 179 179 GLN GLN A . n A 1 136 LEU 136 180 180 LEU LEU A . n A 1 137 ALA 137 181 181 ALA ALA A . n A 1 138 MET 138 182 182 MET MET A . n A 1 139 GLU 139 183 183 GLU GLU A . n A 1 140 TYR 140 184 184 TYR TYR A . n A 1 141 VAL 141 185 185 VAL VAL A . n A 1 142 SER 142 186 186 SER SER A . n A 1 143 ILE 143 187 187 ILE ILE A . n A 1 144 ILE 144 188 188 ILE ILE A . n A 1 145 ASN 145 189 189 ASN ASN A . n A 1 146 TYR 146 190 190 TYR TYR A . n A 1 147 LEU 147 191 191 LEU LEU A . n A 1 148 HIS 148 192 192 HIS HIS A . n A 1 149 HIS 149 193 193 HIS HIS A . n A 1 150 SER 150 194 194 SER SER A . n A 1 151 PRO 151 195 195 PRO PRO A . n A 1 152 LEU 152 196 196 LEU LEU A . n A 1 153 GLY 153 197 197 GLY GLY A . n A 1 154 THR 154 198 198 THR THR A . n A 1 155 ARG 155 199 199 ARG ARG A . n A 1 156 VAL 156 200 200 VAL VAL A . n A 1 157 MET 157 201 201 MET MET A . n A 1 158 CYS 158 202 202 CYS CYS A . n A 1 159 ASP 159 203 203 ASP ASP A . n A 1 160 SER 160 204 204 SER SER A . n A 1 161 ASN 161 205 205 ASN ASN A . n A 1 162 ASP 162 206 206 ASP ASP A . n A 1 163 LEU 163 207 207 LEU LEU A . n A 1 164 PRO 164 208 208 PRO PRO A . n A 1 165 LYS 165 209 209 LYS LYS A . n A 1 166 THR 166 210 210 THR THR A . n A 1 167 LEU 167 211 211 LEU LEU A . n A 1 168 SER 168 212 212 SER SER A . n A 1 169 GLN 169 213 213 GLN GLN A . n A 1 170 TYR 170 214 214 TYR TYR A . n A 1 171 LEU 171 215 215 LEU LEU A . n A 1 172 LEU 172 216 216 LEU LEU A . n A 1 173 THR 173 217 217 THR THR A . n A 1 174 SER 174 218 218 SER SER A . n A 1 175 ASN 175 219 219 ASN ASN A . n A 1 176 PHE 176 220 220 PHE PHE A . n A 1 177 SER 177 221 221 SER SER A . n A 1 178 ILE 178 222 222 ILE ILE A . n A 1 179 VAL 179 223 223 VAL VAL A . n A 1 180 ALA 180 224 224 ALA ALA A . n A 1 181 ASN 181 225 225 ASN ASN A . n A 1 182 ASP 182 226 226 ASP ASP A . n A 1 183 LEU 183 227 227 LEU LEU A . n A 1 184 ASP 184 228 228 ASP ASP A . n A 1 185 ALA 185 229 229 ALA ALA A . n A 1 186 LEU 186 230 230 LEU LEU A . n A 1 187 PRO 187 231 231 PRO PRO A . n A 1 188 LEU 188 232 232 LEU LEU A . n A 1 189 VAL 189 233 233 VAL VAL A . n A 1 190 ASP 190 234 234 ASP ASP A . n A 1 191 HIS 191 235 ? ? ? A . n A 1 192 ASP 192 236 ? ? ? A . n A 1 193 SER 193 237 237 SER SER A . n A 1 194 GLY 194 238 238 GLY GLY A . n A 1 195 VAL 195 239 239 VAL VAL A . n A 1 196 LEU 196 240 240 LEU LEU A . n A 1 197 ILE 197 241 241 ILE ILE A . n A 1 198 LYS 198 242 242 LYS LYS A . n A 1 199 CYS 199 243 243 CYS CYS A . n A 1 200 GLY 200 244 244 GLY GLY A . n A 1 201 HIS 201 245 245 HIS HIS A . n A 1 202 ARG 202 246 246 ARG ARG A . n A 1 203 GLU 203 247 247 GLU GLU A . n A 1 204 LEU 204 248 248 LEU LEU A . n A 1 205 HIS 205 249 249 HIS HIS A . n A 1 206 GLY 206 250 250 GLY GLY A . n A 1 207 ASP 207 251 251 ASP ASP A . n A 1 208 PHE 208 252 252 PHE PHE A . n A 1 209 VAL 209 253 253 VAL VAL A . n A 1 210 ALA 210 254 254 ALA ALA A . n A 1 211 PRO 211 255 255 PRO PRO A . n A 1 212 GLU 212 256 256 GLU GLU A . n A 1 213 GLN 213 257 257 GLN GLN A . n A 1 214 LEU 214 258 258 LEU LEU A . n A 1 215 TRP 215 259 259 TRP TRP A . n A 1 216 PRO 216 260 260 PRO PRO A . n A 1 217 TYR 217 261 261 TYR TYR A . n A 1 218 GLY 218 262 262 GLY GLY A . n A 1 219 GLU 219 263 263 GLU GLU A . n A 1 220 ASP 220 264 264 ASP ASP A . n A 1 221 THR 221 265 265 THR THR A . n A 1 222 PRO 222 266 266 PRO PRO A . n A 1 223 PHE 223 267 267 PHE PHE A . n A 1 224 GLN 224 268 268 GLN GLN A . n A 1 225 ASP 225 269 269 ASP ASP A . n A 1 226 ASP 226 270 270 ASP ASP A . n A 1 227 LEU 227 271 271 LEU LEU A . n A 1 228 MET 228 272 272 MET MET A . n A 1 229 PRO 229 273 273 PRO PRO A . n A 1 230 SER 230 274 274 SER SER A . n A 1 231 TYR 231 275 275 TYR TYR A . n A 1 232 ASN 232 276 276 ASN ASN A . n A 1 233 GLU 233 277 277 GLU GLU A . n A 1 234 LYS 234 278 278 LYS LYS A . n A 1 235 VAL 235 279 279 VAL VAL A . n A 1 236 ASP 236 280 280 ASP ASP A . n A 1 237 ILE 237 281 281 ILE ILE A . n A 1 238 TRP 238 282 282 TRP TRP A . n A 1 239 LYS 239 283 283 LYS LYS A . n A 1 240 ILE 240 284 284 ILE ILE A . n A 1 241 PRO 241 285 285 PRO PRO A . n A 1 242 ASP 242 286 286 ASP ASP A . n A 1 243 VAL 243 287 287 VAL VAL A . n A 1 244 SER 244 288 288 SER SER A . n A 1 245 SER 245 289 289 SER SER A . n A 1 246 PHE 246 290 290 PHE PHE A . n A 1 247 LEU 247 291 291 LEU LEU A . n A 1 248 LEU 248 292 292 LEU LEU A . n A 1 249 GLY 249 293 293 GLY GLY A . n A 1 250 HIS 250 294 294 HIS HIS A . n A 1 251 VAL 251 295 295 VAL VAL A . n A 1 252 GLU 252 296 296 GLU GLU A . n A 1 253 GLY 253 297 297 GLY GLY A . n A 1 254 SER 254 298 298 SER SER A . n A 1 255 ASP 255 299 299 ASP ASP A . n A 1 256 MET 256 300 300 MET MET A . n A 1 257 VAL 257 301 301 VAL VAL A . n A 1 258 ARG 258 302 302 ARG ARG A . n A 1 259 PHE 259 303 303 PHE PHE A . n A 1 260 HIS 260 304 304 HIS HIS A . n A 1 261 LEU 261 305 305 LEU LEU A . n A 1 262 PHE 262 306 306 PHE PHE A . n A 1 263 ASP 263 307 307 ASP ASP A . n A 1 264 ILE 264 308 308 ILE ILE A . n A 1 265 HIS 265 309 309 HIS HIS A . n A 1 266 LYS 266 310 310 LYS LYS A . n A 1 267 ALA 267 311 311 ALA ALA A . n A 1 268 CYS 268 312 312 CYS CYS A . n A 1 269 LYS 269 313 313 LYS LYS A . n A 1 270 SER 270 314 314 SER SER A . n A 1 271 GLN 271 315 315 GLN GLN A . n A 1 272 ILE 272 316 316 ILE ILE A . n A 1 273 PRO 273 317 317 PRO PRO A . n A 1 274 ALA 274 318 318 ALA ALA A . n A 1 275 GLU 275 319 319 GLU GLU A . n A 1 276 ARG 276 320 320 ARG ARG A . n A 1 277 PRO 277 321 321 PRO PRO A . n A 1 278 THR 278 322 322 THR THR A . n A 1 279 ALA 279 323 323 ALA ALA A . n A 1 280 GLN 280 324 324 GLN GLN A . n A 1 281 ASN 281 325 325 ASN ASN A . n A 1 282 VAL 282 326 326 VAL VAL A . n A 1 283 LEU 283 327 327 LEU LEU A . n A 1 284 ASP 284 328 328 ASP ASP A . n A 1 285 ALA 285 329 329 ALA ALA A . n A 1 286 TYR 286 330 330 TYR TYR A . n A 1 287 GLN 287 331 331 GLN GLN A . n A 1 288 ARG 288 332 332 ARG ARG A . n A 1 289 VAL 289 333 333 VAL VAL A . n A 1 290 PHE 290 334 334 PHE PHE A . n A 1 291 HIS 291 335 335 HIS HIS A . n A 1 292 SER 292 336 336 SER SER A . n A 1 293 LEU 293 337 337 LEU LEU A . n A 1 294 ARG 294 338 ? ? ? A . n A 1 295 ASP 295 339 ? ? ? A . n A 1 296 THR 296 340 ? ? ? A . n A 1 297 VAL 297 341 ? ? ? A . n A 1 298 MET 298 342 ? ? ? A . n A 1 299 SER 299 343 ? ? ? A . n A 1 300 GLN 300 344 ? ? ? A . n A 1 301 THR 301 345 ? ? ? A . n A 1 302 LYS 302 346 ? ? ? A . n A 1 303 GLU 303 347 ? ? ? A . n A 1 304 MET 304 348 ? ? ? A . n A 1 305 LEU 305 349 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP 1 1001 1001 ANP ANP A . C 3 MG 1 1002 2001 MG MG A . D 3 MG 1 1003 2002 MG MG A . E 4 MAN 1 1004 3001 MAN MAN A . F 5 HOH 1 1101 7 HOH HOH A . F 5 HOH 2 1102 12 HOH HOH A . F 5 HOH 3 1103 24 HOH HOH A . F 5 HOH 4 1104 11 HOH HOH A . F 5 HOH 5 1105 6 HOH HOH A . F 5 HOH 6 1106 18 HOH HOH A . F 5 HOH 7 1107 31 HOH HOH A . F 5 HOH 8 1108 17 HOH HOH A . F 5 HOH 9 1109 13 HOH HOH A . F 5 HOH 10 1110 32 HOH HOH A . F 5 HOH 11 1111 30 HOH HOH A . F 5 HOH 12 1112 29 HOH HOH A . F 5 HOH 13 1113 14 HOH HOH A . F 5 HOH 14 1114 8 HOH HOH A . F 5 HOH 15 1115 15 HOH HOH A . F 5 HOH 16 1116 19 HOH HOH A . F 5 HOH 17 1117 3 HOH HOH A . F 5 HOH 18 1118 9 HOH HOH A . F 5 HOH 19 1119 21 HOH HOH A . F 5 HOH 20 1120 20 HOH HOH A . F 5 HOH 21 1121 22 HOH HOH A . F 5 HOH 22 1122 5 HOH HOH A . F 5 HOH 23 1123 23 HOH HOH A . F 5 HOH 24 1124 27 HOH HOH A . F 5 HOH 25 1125 2 HOH HOH A . F 5 HOH 26 1126 10 HOH HOH A . F 5 HOH 27 1127 4 HOH HOH A . F 5 HOH 28 1128 16 HOH HOH A . F 5 HOH 29 1129 28 HOH HOH A . F 5 HOH 30 1130 25 HOH HOH A . F 5 HOH 31 1131 26 HOH HOH A . F 5 HOH 32 1132 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLN 169 ? A GLN 213 ? 1_555 MG ? D MG . ? A MG 1003 ? 1_555 O1G ? B ANP . ? A ANP 1001 ? 1_555 75.1 ? 2 OE1 ? A GLN 169 ? A GLN 213 ? 1_555 MG ? D MG . ? A MG 1003 ? 1_555 O1A ? B ANP . ? A ANP 1001 ? 1_555 132.3 ? 3 O1G ? B ANP . ? A ANP 1001 ? 1_555 MG ? D MG . ? A MG 1003 ? 1_555 O1A ? B ANP . ? A ANP 1001 ? 1_555 130.6 ? 4 OD1 ? A ASP 182 ? A ASP 226 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OD2 ? A ASP 182 ? A ASP 226 ? 1_555 54.6 ? 5 OD1 ? A ASP 182 ? A ASP 226 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O2G ? B ANP . ? A ANP 1001 ? 1_555 95.3 ? 6 OD2 ? A ASP 182 ? A ASP 226 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O2G ? B ANP . ? A ANP 1001 ? 1_555 140.2 ? 7 OD1 ? A ASP 182 ? A ASP 226 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O1B ? B ANP . ? A ANP 1001 ? 1_555 90.6 ? 8 OD2 ? A ASP 182 ? A ASP 226 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O1B ? B ANP . ? A ANP 1001 ? 1_555 80.4 ? 9 O2G ? B ANP . ? A ANP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O1B ? B ANP . ? A ANP 1001 ? 1_555 74.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-03-29 2 'Structure model' 1 1 2017-12-06 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' diffrn_source 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_nonpoly 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site 9 3 'Structure model' struct_site_gen 10 4 'Structure model' chem_comp 11 4 'Structure model' chem_comp_atom 12 4 'Structure model' chem_comp_bond 13 4 'Structure model' database_2 14 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 3 'Structure model' '_chem_comp.name' 6 3 'Structure model' '_chem_comp.type' 7 3 'Structure model' '_entity.pdbx_description' 8 3 'Structure model' '_pdbx_entity_nonpoly.name' 9 3 'Structure model' '_struct_conn.pdbx_dist_value' 10 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 4 'Structure model' '_chem_comp.pdbx_synonyms' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 228 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 MG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 MG _pdbx_validate_close_contact.auth_seq_id_2 1002 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.68 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 88 ? ? 167.84 135.32 2 1 LYS A 100 ? ? 49.10 -136.28 3 1 LEU A 112 ? ? -64.01 11.78 4 1 SER A 130 ? ? 172.23 173.60 5 1 ASN A 172 ? ? -90.50 58.87 6 1 SER A 204 ? ? -151.17 67.38 7 1 PHE A 220 ? ? 71.71 42.33 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 45 ? A GLY 1 2 1 Y 1 A ARG 46 ? A ARG 2 3 1 Y 1 A SER 47 ? A SER 3 4 1 Y 1 A THR 48 ? A THR 4 5 1 Y 1 A ALA 49 ? A ALA 5 6 1 Y 1 A ASP 50 ? A ASP 6 7 1 Y 1 A SER 51 ? A SER 7 8 1 Y 1 A ARG 52 ? A ARG 8 9 1 Y 1 A ARG 53 ? A ARG 9 10 1 Y 1 A LEU 165 ? A LEU 121 11 1 Y 1 A SER 166 ? A SER 122 12 1 Y 1 A HIS 235 ? A HIS 191 13 1 Y 1 A ASP 236 ? A ASP 192 14 1 Y 1 A ARG 338 ? A ARG 294 15 1 Y 1 A ASP 339 ? A ASP 295 16 1 Y 1 A THR 340 ? A THR 296 17 1 Y 1 A VAL 341 ? A VAL 297 18 1 Y 1 A MET 342 ? A MET 298 19 1 Y 1 A SER 343 ? A SER 299 20 1 Y 1 A GLN 344 ? A GLN 300 21 1 Y 1 A THR 345 ? A THR 301 22 1 Y 1 A LYS 346 ? A LYS 302 23 1 Y 1 A GLU 347 ? A GLU 303 24 1 Y 1 A MET 348 ? A MET 304 25 1 Y 1 A LEU 349 ? A LEU 305 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ANP PG P N N 14 ANP O1G O N N 15 ANP O2G O N N 16 ANP O3G O N N 17 ANP PB P N N 18 ANP O1B O N N 19 ANP O2B O N N 20 ANP N3B N N N 21 ANP PA P N N 22 ANP O1A O N N 23 ANP O2A O N N 24 ANP O3A O N N 25 ANP "O5'" O N N 26 ANP "C5'" C N N 27 ANP "C4'" C N R 28 ANP "O4'" O N N 29 ANP "C3'" C N S 30 ANP "O3'" O N N 31 ANP "C2'" C N R 32 ANP "O2'" O N N 33 ANP "C1'" C N R 34 ANP N9 N Y N 35 ANP C8 C Y N 36 ANP N7 N Y N 37 ANP C5 C Y N 38 ANP C6 C Y N 39 ANP N6 N N N 40 ANP N1 N Y N 41 ANP C2 C Y N 42 ANP N3 N Y N 43 ANP C4 C Y N 44 ANP HOG2 H N N 45 ANP HOG3 H N N 46 ANP HOB2 H N N 47 ANP HNB1 H N N 48 ANP HOA2 H N N 49 ANP "H5'1" H N N 50 ANP "H5'2" H N N 51 ANP "H4'" H N N 52 ANP "H3'" H N N 53 ANP "HO3'" H N N 54 ANP "H2'" H N N 55 ANP "HO2'" H N N 56 ANP "H1'" H N N 57 ANP H8 H N N 58 ANP HN61 H N N 59 ANP HN62 H N N 60 ANP H2 H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MAN C1 C N S 278 MAN C2 C N S 279 MAN C3 C N S 280 MAN C4 C N S 281 MAN C5 C N R 282 MAN C6 C N N 283 MAN O1 O N N 284 MAN O2 O N N 285 MAN O3 O N N 286 MAN O4 O N N 287 MAN O5 O N N 288 MAN O6 O N N 289 MAN H1 H N N 290 MAN H2 H N N 291 MAN H3 H N N 292 MAN H4 H N N 293 MAN H5 H N N 294 MAN H61 H N N 295 MAN H62 H N N 296 MAN HO1 H N N 297 MAN HO2 H N N 298 MAN HO3 H N N 299 MAN HO4 H N N 300 MAN HO6 H N N 301 MET N N N N 302 MET CA C N S 303 MET C C N N 304 MET O O N N 305 MET CB C N N 306 MET CG C N N 307 MET SD S N N 308 MET CE C N N 309 MET OXT O N N 310 MET H H N N 311 MET H2 H N N 312 MET HA H N N 313 MET HB2 H N N 314 MET HB3 H N N 315 MET HG2 H N N 316 MET HG3 H N N 317 MET HE1 H N N 318 MET HE2 H N N 319 MET HE3 H N N 320 MET HXT H N N 321 MG MG MG N N 322 PHE N N N N 323 PHE CA C N S 324 PHE C C N N 325 PHE O O N N 326 PHE CB C N N 327 PHE CG C Y N 328 PHE CD1 C Y N 329 PHE CD2 C Y N 330 PHE CE1 C Y N 331 PHE CE2 C Y N 332 PHE CZ C Y N 333 PHE OXT O N N 334 PHE H H N N 335 PHE H2 H N N 336 PHE HA H N N 337 PHE HB2 H N N 338 PHE HB3 H N N 339 PHE HD1 H N N 340 PHE HD2 H N N 341 PHE HE1 H N N 342 PHE HE2 H N N 343 PHE HZ H N N 344 PHE HXT H N N 345 PRO N N N N 346 PRO CA C N S 347 PRO C C N N 348 PRO O O N N 349 PRO CB C N N 350 PRO CG C N N 351 PRO CD C N N 352 PRO OXT O N N 353 PRO H H N N 354 PRO HA H N N 355 PRO HB2 H N N 356 PRO HB3 H N N 357 PRO HG2 H N N 358 PRO HG3 H N N 359 PRO HD2 H N N 360 PRO HD3 H N N 361 PRO HXT H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ANP PG O1G doub N N 13 ANP PG O2G sing N N 14 ANP PG O3G sing N N 15 ANP PG N3B sing N N 16 ANP O2G HOG2 sing N N 17 ANP O3G HOG3 sing N N 18 ANP PB O1B doub N N 19 ANP PB O2B sing N N 20 ANP PB N3B sing N N 21 ANP PB O3A sing N N 22 ANP O2B HOB2 sing N N 23 ANP N3B HNB1 sing N N 24 ANP PA O1A doub N N 25 ANP PA O2A sing N N 26 ANP PA O3A sing N N 27 ANP PA "O5'" sing N N 28 ANP O2A HOA2 sing N N 29 ANP "O5'" "C5'" sing N N 30 ANP "C5'" "C4'" sing N N 31 ANP "C5'" "H5'1" sing N N 32 ANP "C5'" "H5'2" sing N N 33 ANP "C4'" "O4'" sing N N 34 ANP "C4'" "C3'" sing N N 35 ANP "C4'" "H4'" sing N N 36 ANP "O4'" "C1'" sing N N 37 ANP "C3'" "O3'" sing N N 38 ANP "C3'" "C2'" sing N N 39 ANP "C3'" "H3'" sing N N 40 ANP "O3'" "HO3'" sing N N 41 ANP "C2'" "O2'" sing N N 42 ANP "C2'" "C1'" sing N N 43 ANP "C2'" "H2'" sing N N 44 ANP "O2'" "HO2'" sing N N 45 ANP "C1'" N9 sing N N 46 ANP "C1'" "H1'" sing N N 47 ANP N9 C8 sing Y N 48 ANP N9 C4 sing Y N 49 ANP C8 N7 doub Y N 50 ANP C8 H8 sing N N 51 ANP N7 C5 sing Y N 52 ANP C5 C6 sing Y N 53 ANP C5 C4 doub Y N 54 ANP C6 N6 sing N N 55 ANP C6 N1 doub Y N 56 ANP N6 HN61 sing N N 57 ANP N6 HN62 sing N N 58 ANP N1 C2 sing Y N 59 ANP C2 N3 doub Y N 60 ANP C2 H2 sing N N 61 ANP N3 C4 sing Y N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MAN C1 C2 sing N N 268 MAN C1 O1 sing N N 269 MAN C1 O5 sing N N 270 MAN C1 H1 sing N N 271 MAN C2 C3 sing N N 272 MAN C2 O2 sing N N 273 MAN C2 H2 sing N N 274 MAN C3 C4 sing N N 275 MAN C3 O3 sing N N 276 MAN C3 H3 sing N N 277 MAN C4 C5 sing N N 278 MAN C4 O4 sing N N 279 MAN C4 H4 sing N N 280 MAN C5 C6 sing N N 281 MAN C5 O5 sing N N 282 MAN C5 H5 sing N N 283 MAN C6 O6 sing N N 284 MAN C6 H61 sing N N 285 MAN C6 H62 sing N N 286 MAN O1 HO1 sing N N 287 MAN O2 HO2 sing N N 288 MAN O3 HO3 sing N N 289 MAN O4 HO4 sing N N 290 MAN O6 HO6 sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PRO N CA sing N N 334 PRO N CD sing N N 335 PRO N H sing N N 336 PRO CA C sing N N 337 PRO CA CB sing N N 338 PRO CA HA sing N N 339 PRO C O doub N N 340 PRO C OXT sing N N 341 PRO CB CG sing N N 342 PRO CB HB2 sing N N 343 PRO CB HB3 sing N N 344 PRO CG CD sing N N 345 PRO CG HG2 sing N N 346 PRO CG HG3 sing N N 347 PRO CD HD2 sing N N 348 PRO CD HD3 sing N N 349 PRO OXT HXT sing N N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal MEXT Japan 15K18496 1 MEXT Japan 26110724 2 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 3 'MAGNESIUM ION' MG 4 alpha-D-mannopyranose MAN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5GZ8 _pdbx_initial_refinement_model.details ? #