HEADER TRANSFERASE 02-OCT-16 5H02 TITLE CRYSTAL STRUCTURE OF METHANOHALOPHILUS PORTUCALENSIS GLYCINE SARCOSINE TITLE 2 N-METHYLTRANSFERASE TETRAMUTANT (H21G, E23T, E24N, L28S) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCINE SARCOSINE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOHALOPHILUS PORTUCALENSIS FDF-1; SOURCE 3 ORGANISM_TAXID: 523843; SOURCE 4 GENE: GSMT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASES, SAM, ADOMET-MTASE, KEYWDS 2 CLASS I MONOMETHYLATION, GLYCINE, SARCOSINE, RATE-LIMITING ENZYME, KEYWDS 3 BETAINE BIOSYNTHESIS, BETAINE-MEDIATED FEEDBACK INHIBITION, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.R.LEE,T.S.LIN,S.J.LAI,M.S.LIU,M.C.LAI,N.L.CHAN REVDAT 4 15-NOV-23 5H02 1 ATOM REVDAT 3 08-NOV-23 5H02 1 REMARK REVDAT 2 18-JAN-17 5H02 1 JRNL REMARK REVDAT 1 23-NOV-16 5H02 0 JRNL AUTH Y.R.LEE,T.S.LIN,S.J.LAI,M.S.LIU,M.C.LAI,N.L.CHAN JRNL TITL STRUCTURAL ANALYSIS OF GLYCINE SARCOSINE N-METHYLTRANSFERASE JRNL TITL 2 FROM METHANOHALOPHILUS PORTUCALENSIS REVEALS MECHANISTIC JRNL TITL 3 INSIGHTS INTO THE REGULATION OF METHYLTRANSFERASE ACTIVITY. JRNL REF SCI REP V. 6 38071 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27934872 JRNL DOI 10.1038/SREP38071 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 40110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8889 - 4.2667 1.00 2892 148 0.1739 0.1840 REMARK 3 2 4.2667 - 3.3921 1.00 2785 148 0.1482 0.1608 REMARK 3 3 3.3921 - 2.9649 1.00 2755 139 0.1678 0.1902 REMARK 3 4 2.9649 - 2.6945 1.00 2735 146 0.1877 0.1953 REMARK 3 5 2.6945 - 2.5018 1.00 2723 145 0.1861 0.2173 REMARK 3 6 2.5018 - 2.3545 1.00 2725 145 0.1905 0.2093 REMARK 3 7 2.3545 - 2.2368 1.00 2711 143 0.1737 0.2071 REMARK 3 8 2.2368 - 2.1395 1.00 2722 138 0.1757 0.2203 REMARK 3 9 2.1395 - 2.0572 1.00 2705 138 0.1833 0.2232 REMARK 3 10 2.0572 - 1.9863 1.00 2691 150 0.1908 0.2042 REMARK 3 11 1.9863 - 1.9243 1.00 2718 127 0.2030 0.2484 REMARK 3 12 1.9243 - 1.8693 1.00 2681 164 0.2079 0.2452 REMARK 3 13 1.8693 - 1.8201 1.00 2688 130 0.2171 0.2291 REMARK 3 14 1.8201 - 1.7758 0.96 2584 134 0.2240 0.2175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2102 REMARK 3 ANGLE : 0.796 2849 REMARK 3 CHIRALITY : 0.053 299 REMARK 3 PLANARITY : 0.004 372 REMARK 3 DIHEDRAL : 16.015 1214 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6711 45.9382 160.8828 REMARK 3 T TENSOR REMARK 3 T11: 0.3706 T22: 0.3583 REMARK 3 T33: 0.3904 T12: 0.0122 REMARK 3 T13: -0.1072 T23: 0.0846 REMARK 3 L TENSOR REMARK 3 L11: 1.7202 L22: 7.7484 REMARK 3 L33: 5.0770 L12: -2.3068 REMARK 3 L13: -0.1210 L23: -4.6973 REMARK 3 S TENSOR REMARK 3 S11: -0.2152 S12: 0.3651 S13: 0.2393 REMARK 3 S21: -0.5183 S22: 0.4279 S23: 1.1911 REMARK 3 S31: -0.5434 S32: -0.6531 S33: -0.2701 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.7056 45.1121 154.1731 REMARK 3 T TENSOR REMARK 3 T11: 0.2464 T22: 0.3034 REMARK 3 T33: 0.3397 T12: 0.0253 REMARK 3 T13: -0.0714 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 6.7253 L22: 1.7488 REMARK 3 L33: 5.7188 L12: -0.4716 REMARK 3 L13: -5.4693 L23: 0.3946 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: -0.2465 S13: -0.1218 REMARK 3 S21: 0.2347 S22: 0.2472 S23: -0.5091 REMARK 3 S31: 0.5861 S32: 1.0384 S33: 0.0368 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.9080 52.9646 149.3583 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.1213 REMARK 3 T33: 0.1551 T12: -0.0158 REMARK 3 T13: -0.0141 T23: 0.0589 REMARK 3 L TENSOR REMARK 3 L11: 3.2852 L22: 2.6872 REMARK 3 L33: 3.6681 L12: -0.1079 REMARK 3 L13: -0.5225 L23: 1.9151 REMARK 3 S TENSOR REMARK 3 S11: -0.0756 S12: 0.2768 S13: 0.2164 REMARK 3 S21: -0.2149 S22: 0.0389 S23: -0.0072 REMARK 3 S31: -0.2288 S32: 0.1049 S33: 0.0330 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.5238 40.3117 141.8861 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 0.2395 REMARK 3 T33: 0.1024 T12: -0.0045 REMARK 3 T13: 0.0047 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 2.4916 L22: 6.3956 REMARK 3 L33: 3.7689 L12: -0.1359 REMARK 3 L13: 1.3290 L23: -1.3033 REMARK 3 S TENSOR REMARK 3 S11: -0.1100 S12: 0.3098 S13: -0.0286 REMARK 3 S21: -0.3157 S22: 0.0108 S23: 0.0433 REMARK 3 S31: 0.0291 S32: -0.0459 S33: 0.0849 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.8945 28.0235 159.3831 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.1661 REMARK 3 T33: 0.2094 T12: 0.0089 REMARK 3 T13: 0.0055 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 2.1327 L22: 2.4445 REMARK 3 L33: 7.2330 L12: 0.4075 REMARK 3 L13: -0.1965 L23: 1.7089 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: 0.0428 S13: -0.3501 REMARK 3 S21: 0.1491 S22: 0.0140 S23: -0.1488 REMARK 3 S31: 0.5159 S32: -0.0733 S33: -0.0489 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1691 32.8932 144.4546 REMARK 3 T TENSOR REMARK 3 T11: 0.1637 T22: 0.2229 REMARK 3 T33: 0.1544 T12: 0.0245 REMARK 3 T13: 0.0403 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.4747 L22: 1.9131 REMARK 3 L33: 6.8976 L12: -0.3151 REMARK 3 L13: 3.0767 L23: -2.1149 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: 0.3917 S13: -0.2139 REMARK 3 S21: -0.3113 S22: -0.0262 S23: -0.1675 REMARK 3 S31: 0.2517 S32: 0.3140 S33: 0.0278 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5H02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1300001702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40112 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.776 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.5180 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8_1069 REMARK 200 STARTING MODEL: 5HIL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: GSMT (6.6 MG/ML) IN REMARK 280 100 MM TES PH 7.3, 2 M KCL, 1 MM EDTA, 1 MM 2-MERCAPTOETHANOL, REMARK 280 0.1 MM SAH AND 50 MM GLYCINE. CRYSTALLIZATION REAGENT: 0.2 M REMARK 280 AMMONIUM PHOSPHATE MONOBASIC. 0.23 M AMMONIA PHOSPHATE MONOBASIC, REMARK 280 0.1 MM SAH AND 3.35 M BETAINE WERE USED AS CRYOPROTECTANT REMARK 280 BEFORE DATA COLLECTION, VAPOR DIFFUSION, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.93700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.40150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.65050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.93700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.40150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.65050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.93700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.40150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.65050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.93700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.40150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.65050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 424 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 437 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 495 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 548 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 TYR A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 GLN A 7 REMARK 465 ASP A 8 REMARK 465 PHE A 9 REMARK 465 GLY A 10 REMARK 465 ASP A 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 12 CG OD1 ND2 REMARK 470 ILE A 14 CG1 CG2 CD1 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 22 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR A 23 OG1 CG2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 ARG A 109 NH1 REMARK 470 LYS A 147 CE NZ REMARK 470 GLN A 236 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 -161.16 -129.29 REMARK 500 TRP A 117 66.40 -150.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BET A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BET A 303 DBREF 5H02 A 1 263 UNP F6KV61 F6KV61_9EURY 1 263 SEQADV 5H02 MET A -19 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 GLY A -18 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 SER A -17 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 SER A -16 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -15 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -14 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -13 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -12 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -11 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A -10 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 SER A -9 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 SER A -8 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 GLY A -7 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 LEU A -6 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 VAL A -5 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 PRO A -4 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 ARG A -3 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 GLY A -2 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 SER A -1 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 HIS A 0 UNP F6KV61 EXPRESSION TAG SEQADV 5H02 GLY A 21 UNP F6KV61 HIS 21 ENGINEERED MUTATION SEQADV 5H02 THR A 23 UNP F6KV61 GLU 23 ENGINEERED MUTATION SEQADV 5H02 ASN A 24 UNP F6KV61 GLU 24 ENGINEERED MUTATION SEQADV 5H02 SER A 28 UNP F6KV61 LEU 28 ENGINEERED MUTATION SEQRES 1 A 283 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 283 LEU VAL PRO ARG GLY SER HIS MET ASN GLN TYR GLY LYS SEQRES 3 A 283 GLN ASP PHE GLY ASP ASN PRO ILE GLU VAL ARG GLU SER SEQRES 4 A 283 ASP GLY TYR THR ASN GLU TYR VAL SER GLY PHE VAL ASP SEQRES 5 A 283 LYS TRP ASP GLU LEU ILE ASP TRP GLU SER ARG ALA GLU SEQRES 6 A 283 SER GLU GLY ASP THR ILE ILE ASN ILE LEU LYS GLU ARG SEQRES 7 A 283 GLY VAL LYS LYS VAL LEU ASP VAL ALA THR GLY THR GLY SEQRES 8 A 283 PHE ASN SER VAL ARG LEU LEU GLN ALA GLY PHE ASP VAL SEQRES 9 A 283 VAL SER ALA ASP GLY SER ALA GLU MET LEU VAL LYS ALA SEQRES 10 A 283 PHE ASP ASN ALA ARG ASP HIS GLY TYR LEU MET ARG THR SEQRES 11 A 283 VAL GLN ALA ASP TRP ARG TRP MET ASN LYS ASP ILE HIS SEQRES 12 A 283 ASP LYS PHE ASP ALA ILE VAL CYS LEU GLY ASN SER PHE SEQRES 13 A 283 THR HIS LEU PHE ASP GLU GLY ASP ARG ARG LYS ALA LEU SEQRES 14 A 283 ALA GLU PHE TYR ALA LEU LEU LYS HIS ASP GLY VAL LEU SEQRES 15 A 283 LEU LEU ASP GLN ARG ASN TYR ASP ALA ILE LEU ASP ASP SEQRES 16 A 283 GLY TYR SER SER LYS HIS ALA HIS TYR TYR CYS GLY ASP SEQRES 17 A 283 THR VAL SER VAL TYR PRO GLU HIS VAL ASP GLU GLY LEU SEQRES 18 A 283 ALA ARG PHE LYS TYR GLU PHE SER ASP GLY SER VAL TYR SEQRES 19 A 283 ASN LEU ASN MET PHE PRO LEU ARG LYS ASP TYR THR ARG SEQRES 20 A 283 GLN LEU LEU HIS GLU VAL GLY PHE GLN GLU ILE ASN THR SEQRES 21 A 283 LEU GLY ASP PHE LYS GLU THR TYR LYS GLU ASP GLU PRO SEQRES 22 A 283 ASP PHE PHE LEU HIS VAL ALA GLU LYS ASN HET SAH A 301 26 HET BET A 302 8 HET BET A 303 8 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM BET TRIMETHYL GLYCINE FORMUL 2 SAH C14 H20 N6 O5 S FORMUL 3 BET 2(C5 H12 N O2 1+) FORMUL 5 HOH *173(H2 O) HELIX 1 AA1 ASN A 24 ILE A 38 1 15 HELIX 2 AA2 ASP A 39 GLY A 48 1 10 HELIX 3 AA3 ASP A 49 ARG A 58 1 10 HELIX 4 AA4 GLY A 71 ALA A 80 1 10 HELIX 5 AA5 SER A 90 HIS A 104 1 15 HELIX 6 AA6 ASP A 114 ASP A 121 5 8 HELIX 7 AA7 SER A 135 LEU A 139 5 5 HELIX 8 AA8 ASP A 141 LEU A 155 1 15 HELIX 9 AA9 ASN A 168 ASP A 174 1 7 HELIX 10 AB1 GLY A 176 LYS A 180 5 5 HELIX 11 AB2 ARG A 222 GLY A 234 1 13 SHEET 1 AA1 7 THR A 110 GLN A 112 0 SHEET 2 AA1 7 ASP A 83 ASP A 88 1 N SER A 86 O VAL A 111 SHEET 3 AA1 7 LYS A 62 ASP A 65 1 N ASP A 65 O ALA A 87 SHEET 4 AA1 7 PHE A 126 CYS A 131 1 O ALA A 128 N LEU A 64 SHEET 5 AA1 7 LEU A 156 ARG A 167 1 O LEU A 163 N ILE A 129 SHEET 6 AA1 7 PHE A 255 GLU A 261 -1 O HIS A 258 N LEU A 164 SHEET 7 AA1 7 GLU A 237 ASP A 243 -1 N GLU A 237 O GLU A 261 SHEET 1 AA2 4 HIS A 183 TYR A 185 0 SHEET 2 AA2 4 VAL A 190 ASP A 198 -1 O VAL A 192 N HIS A 183 SHEET 3 AA2 4 LEU A 201 PHE A 208 -1 O LYS A 205 N TYR A 193 SHEET 4 AA2 4 VAL A 213 MET A 218 -1 O TYR A 214 N TYR A 206 SITE 1 AC1 20 ARG A 43 ALA A 67 THR A 68 GLY A 69 SITE 2 AC1 20 ASN A 73 ASP A 88 GLY A 89 MET A 93 SITE 3 AC1 20 ALA A 113 ASP A 114 TRP A 115 ARG A 116 SITE 4 AC1 20 LEU A 132 GLY A 133 SER A 135 HIS A 138 SITE 5 AC1 20 HOH A 439 HOH A 497 HOH A 510 HOH A 518 SITE 1 AC2 7 ASP A 35 ASP A 39 TRP A 40 ASN A 100 SITE 2 AC2 7 HIS A 104 HOH A 503 HOH A 516 SITE 1 AC3 8 PHE A 30 TRP A 34 ARG A 43 GLY A 133 SITE 2 AC3 8 ARG A 167 TYR A 206 PHE A 255 HOH A 410 CRYST1 51.874 120.803 131.301 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008278 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007616 0.00000