HEADER TRANSFERASE 08-OCT-16 5H16 TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOPANTETHEINE TITLE 2 ADENYLYLTRANSFERASE FROM ACINETOBACTER BAUMANNII WITH CITRATE AT 2.3 TITLE 3 A RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: DEPHOSPHO-COA PYROPHOSPHORYLASE,PANTETHEINE-PHOSPHATE COMPND 5 ADENYLYLTRANSFERASE; COMPND 6 EC: 2.7.7.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: COAD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.GUPTA,P.K.SINGH,P.KAUR,S.SHARMA,T.P.SINGH REVDAT 2 08-NOV-23 5H16 1 REMARK REVDAT 1 09-NOV-16 5H16 0 JRNL AUTH A.GUPTA,P.K.SINGH,P.KAUR,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOPANTETHEINE JRNL TITL 2 ADENYLYLTRANSFERASE FROM ACINETOBACTER BAUMANNII AT 2.3 A JRNL TITL 3 RESOLUTION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 45713 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 949 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3276 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.3320 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7788 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : -0.46000 REMARK 3 B33 (A**2) : 1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.464 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.294 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.258 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.903 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.857 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8040 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7659 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10878 ; 1.799 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17523 ; 1.081 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 966 ; 6.075 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 402 ;33.254 ;23.433 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1332 ;18.135 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;20.784 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1206 ; 0.179 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9114 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2010 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3882 ; 3.282 ; 3.552 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3881 ; 3.281 ; 3.551 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4842 ; 5.275 ; 5.313 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4843 ; 5.275 ; 5.313 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4158 ; 3.610 ; 4.150 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4156 ; 3.610 ; 4.150 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6036 ; 5.877 ; 6.024 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 32819 ;10.187 ;67.760 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 32808 ;10.189 ;67.755 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 15 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 3 162 B 3 162 10282 0.09 0.05 REMARK 3 2 A 3 162 C 3 162 10094 0.10 0.05 REMARK 3 3 A 3 162 D 3 162 10204 0.10 0.05 REMARK 3 4 A 1 163 E 1 163 10444 0.09 0.05 REMARK 3 5 A 1 163 F 1 163 10276 0.10 0.05 REMARK 3 6 B 3 163 C 3 163 10294 0.10 0.05 REMARK 3 7 B 3 163 D 3 163 10302 0.10 0.05 REMARK 3 8 B 3 162 E 3 162 10308 0.08 0.05 REMARK 3 9 B 3 162 F 3 162 10172 0.10 0.05 REMARK 3 10 C 3 163 D 3 163 10158 0.11 0.05 REMARK 3 11 C 3 162 E 3 162 10144 0.09 0.05 REMARK 3 12 C 3 162 F 3 162 10166 0.10 0.05 REMARK 3 13 D 3 162 E 3 162 10142 0.11 0.05 REMARK 3 14 D 3 162 F 3 162 10058 0.11 0.05 REMARK 3 15 E 1 163 F 1 163 10314 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5H16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1300001816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46855 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 81.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15000 REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1H1T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES NA PH 7.5, 1.0M NA CITRATE REMARK 280 TRIBASIC DIHYDRATE., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.29500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.89850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.90650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.89850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.29500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.90650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O7 CIT A 201 O HOH A 301 2.03 REMARK 500 OD2 ASP C 21 O HOH C 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 157 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 25 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU B 74 CB - CG - CD2 ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG C 25 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP C 72 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 ARG C 134 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 GLU C 135 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG D 92 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG E 25 CG - CD - NE ANGL. DEV. = 20.4 DEGREES REMARK 500 ARG E 25 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 THR F 85 CA - CB - CG2 ANGL. DEV. = 8.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 3 131.95 -33.05 REMARK 500 HIS A 41 94.49 -60.15 REMARK 500 HIS A 42 168.17 62.44 REMARK 500 HIS B 41 94.57 -61.64 REMARK 500 HIS B 42 168.23 64.87 REMARK 500 GLN B 161 -74.46 -90.30 REMARK 500 HIS C 41 95.27 -61.51 REMARK 500 HIS C 42 166.77 65.29 REMARK 500 GLN C 161 -144.22 -88.68 REMARK 500 LYS D 43 173.10 69.15 REMARK 500 HIS E 41 97.14 -62.12 REMARK 500 HIS E 42 167.85 62.90 REMARK 500 HIS F 41 93.15 -64.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS D 41 HIS D 42 140.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT F 201 DBREF1 5H16 A 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 A A0A059ZFC5 1 163 DBREF1 5H16 B 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 B A0A059ZFC5 1 163 DBREF1 5H16 C 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 C A0A059ZFC5 1 163 DBREF1 5H16 D 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 D A0A059ZFC5 1 163 DBREF1 5H16 E 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 E A0A059ZFC5 1 163 DBREF1 5H16 F 1 163 UNP A0A059ZFC5_ACIBA DBREF2 5H16 F A0A059ZFC5 1 163 SEQRES 1 A 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 A 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 A 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 A 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 A 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 A 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 A 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 A 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 A 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 A 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 A 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 A 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 A 163 ARG LYS HIS GLN GLN GLY TRP SEQRES 1 B 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 B 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 B 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 B 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 B 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 B 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 B 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 B 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 B 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 B 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 B 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 B 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 B 163 ARG LYS HIS GLN GLN GLY TRP SEQRES 1 C 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 C 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 C 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 C 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 C 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 C 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 C 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 C 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 C 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 C 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 C 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 C 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 C 163 ARG LYS HIS GLN GLN GLY TRP SEQRES 1 D 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 D 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 D 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 D 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 D 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 D 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 D 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 D 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 D 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 D 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 D 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 D 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 D 163 ARG LYS HIS GLN GLN GLY TRP SEQRES 1 E 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 E 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 E 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 E 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 E 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 E 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 E 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 E 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 E 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 E 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 E 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 E 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 E 163 ARG LYS HIS GLN GLN GLY TRP SEQRES 1 F 163 MET SER LYS THR ARG VAL ILE TYR PRO GLY THR PHE ASP SEQRES 2 F 163 PRO ILE THR ASN GLY HIS VAL ASP LEU VAL THR ARG ALA SEQRES 3 F 163 SER ARG MET PHE ASP GLU VAL VAL VAL ALA ILE ALA ILE SEQRES 4 F 163 GLY HIS HIS LYS ASN PRO LEU PHE SER LEU GLU GLU ARG SEQRES 5 F 163 VAL ALA LEU ALA GLN SER SER LEU GLY HIS LEU SER ASN SEQRES 6 F 163 VAL GLU PHE VAL GLY PHE ASP GLY LEU LEU VAL ASN PHE SEQRES 7 F 163 PHE LYS GLU GLN LYS ALA THR ALA VAL LEU ARG GLY LEU SEQRES 8 F 163 ARG ALA VAL SER ASP PHE GLU TYR GLU PHE GLN LEU ALA SEQRES 9 F 163 ASN MET ASN ARG GLN LEU ASP PRO HIS PHE GLU ALA VAL SEQRES 10 F 163 PHE LEU THR PRO SER GLU GLN TYR SER PHE ILE SER SER SEQRES 11 F 163 THR LEU ILE ARG GLU ILE ALA ARG LEU LYS GLY ASP VAL SEQRES 12 F 163 THR LYS PHE VAL PRO GLN ALA VAL VAL GLU ALA PHE GLU SEQRES 13 F 163 ARG LYS HIS GLN GLN GLY TRP HET CIT A 201 13 HET CIT B 201 13 HET CIT C 201 13 HET CIT D 201 13 HET CIT E 201 13 HET CIT F 201 13 HETNAM CIT CITRIC ACID FORMUL 7 CIT 6(C6 H8 O7) FORMUL 13 HOH *124(H2 O) HELIX 1 AA1 THR A 16 ARG A 28 1 13 HELIX 2 AA2 SER A 48 GLY A 61 1 14 HELIX 3 AA3 LEU A 74 GLN A 82 1 9 HELIX 4 AA4 ALA A 93 ASP A 111 1 19 HELIX 5 AA5 SER A 122 SER A 126 5 5 HELIX 6 AA6 SER A 129 LEU A 139 1 11 HELIX 7 AA7 PRO A 148 GLN A 161 1 14 HELIX 8 AA8 THR B 16 ARG B 28 1 13 HELIX 9 AA9 SER B 48 GLY B 61 1 14 HELIX 10 AB1 LEU B 74 GLN B 82 1 9 HELIX 11 AB2 ALA B 93 ASP B 111 1 19 HELIX 12 AB3 SER B 122 SER B 126 5 5 HELIX 13 AB4 SER B 129 LEU B 139 1 11 HELIX 14 AB5 PRO B 148 GLY B 162 1 15 HELIX 15 AB6 THR C 16 ARG C 28 1 13 HELIX 16 AB7 SER C 48 GLY C 61 1 14 HELIX 17 AB8 LEU C 74 GLN C 82 1 9 HELIX 18 AB9 ALA C 93 ASP C 111 1 19 HELIX 19 AC1 SER C 122 SER C 126 5 5 HELIX 20 AC2 SER C 129 LEU C 139 1 11 HELIX 21 AC3 PRO C 148 GLN C 161 1 14 HELIX 22 AC4 THR D 16 ARG D 28 1 13 HELIX 23 AC5 SER D 48 GLY D 61 1 14 HELIX 24 AC6 LEU D 74 GLN D 82 1 9 HELIX 25 AC7 ALA D 93 ASP D 111 1 19 HELIX 26 AC8 SER D 122 SER D 126 5 5 HELIX 27 AC9 SER D 129 LEU D 139 1 11 HELIX 28 AD1 PRO D 148 GLY D 162 1 15 HELIX 29 AD2 THR E 16 ARG E 28 1 13 HELIX 30 AD3 SER E 48 GLY E 61 1 14 HELIX 31 AD4 LEU E 74 GLN E 82 1 9 HELIX 32 AD5 ALA E 93 ASP E 111 1 19 HELIX 33 AD6 SER E 122 SER E 126 5 5 HELIX 34 AD7 SER E 129 LEU E 139 1 11 HELIX 35 AD8 PRO E 148 GLN E 161 1 14 HELIX 36 AD9 THR F 16 ARG F 28 1 13 HELIX 37 AE1 SER F 48 GLY F 61 1 14 HELIX 38 AE2 LEU F 74 GLN F 82 1 9 HELIX 39 AE3 ALA F 93 ASP F 111 1 19 HELIX 40 AE4 SER F 122 SER F 126 5 5 HELIX 41 AE5 SER F 129 LEU F 139 1 11 HELIX 42 AE6 PRO F 148 GLN F 161 1 14 SHEET 1 AA110 VAL A 66 PHE A 71 0 SHEET 2 AA110 GLU A 32 ALA A 38 1 N VAL A 35 O GLU A 67 SHEET 3 AA110 ARG A 5 GLY A 10 1 N TYR A 8 O VAL A 34 SHEET 4 AA110 ALA A 86 GLY A 90 1 O LEU A 88 N ILE A 7 SHEET 5 AA110 ALA A 116 LEU A 119 1 O VAL A 117 N VAL A 87 SHEET 6 AA110 ALA F 116 LEU F 119 -1 O PHE F 118 N PHE A 118 SHEET 7 AA110 ALA F 86 GLY F 90 1 N VAL F 87 O VAL F 117 SHEET 8 AA110 ARG F 5 GLY F 10 1 N ILE F 7 O LEU F 88 SHEET 9 AA110 GLU F 32 ALA F 38 1 O VAL F 34 N TYR F 8 SHEET 10 AA110 VAL F 66 PHE F 71 1 O GLU F 67 N VAL F 35 SHEET 1 AA210 VAL B 66 PHE B 71 0 SHEET 2 AA210 GLU B 32 ALA B 38 1 N VAL B 35 O GLU B 67 SHEET 3 AA210 ARG B 5 GLY B 10 1 N TYR B 8 O VAL B 34 SHEET 4 AA210 ALA B 86 GLY B 90 1 O LEU B 88 N ILE B 7 SHEET 5 AA210 ALA B 116 LEU B 119 1 O VAL B 117 N VAL B 87 SHEET 6 AA210 ALA E 116 LEU E 119 -1 O PHE E 118 N PHE B 118 SHEET 7 AA210 ALA E 86 GLY E 90 1 N VAL E 87 O VAL E 117 SHEET 8 AA210 ARG E 5 GLY E 10 1 N ILE E 7 O LEU E 88 SHEET 9 AA210 GLU E 32 ALA E 38 1 O VAL E 34 N TYR E 8 SHEET 10 AA210 VAL E 66 PHE E 71 1 O GLU E 67 N VAL E 35 SHEET 1 AA310 VAL C 66 PHE C 71 0 SHEET 2 AA310 GLU C 32 ALA C 38 1 N VAL C 35 O GLU C 67 SHEET 3 AA310 ARG C 5 GLY C 10 1 N TYR C 8 O VAL C 34 SHEET 4 AA310 ALA C 86 GLY C 90 1 O LEU C 88 N ILE C 7 SHEET 5 AA310 ALA C 116 LEU C 119 1 O VAL C 117 N VAL C 87 SHEET 6 AA310 ALA D 116 LEU D 119 -1 O PHE D 118 N PHE C 118 SHEET 7 AA310 ALA D 86 GLY D 90 1 N VAL D 87 O VAL D 117 SHEET 8 AA310 ARG D 5 GLY D 10 1 N ILE D 7 O LEU D 88 SHEET 9 AA310 GLU D 32 ALA D 38 1 O VAL D 34 N TYR D 8 SHEET 10 AA310 VAL D 66 PHE D 71 1 O GLU D 67 N VAL D 35 CISPEP 1 ASP A 13 PRO A 14 0 -1.18 CISPEP 2 ASP B 13 PRO B 14 0 -0.80 CISPEP 3 ASP C 13 PRO C 14 0 -0.18 CISPEP 4 ASP D 13 PRO D 14 0 -0.92 CISPEP 5 ASP E 13 PRO E 14 0 -0.84 CISPEP 6 ASP F 13 PRO F 14 0 -0.70 SITE 1 AC1 9 GLY A 10 THR A 11 PHE A 12 HIS A 19 SITE 2 AC1 9 ARG A 92 SER A 129 SER A 130 THR A 131 SITE 3 AC1 9 HOH A 301 SITE 1 AC2 7 THR B 11 PHE B 12 HIS B 19 ARG B 89 SITE 2 AC2 7 SER B 129 SER B 130 THR B 131 SITE 1 AC3 9 GLY C 10 THR C 11 PHE C 12 HIS C 19 SITE 2 AC3 9 ARG C 92 SER C 129 SER C 130 THR C 131 SITE 3 AC3 9 HOH C 304 SITE 1 AC4 8 PHE D 12 HIS D 19 ARG D 89 ARG D 92 SITE 2 AC4 8 SER D 129 SER D 130 THR D 131 HOH D 306 SITE 1 AC5 10 GLY E 10 THR E 11 PHE E 12 HIS E 19 SITE 2 AC5 10 ARG E 92 SER E 129 SER E 130 THR E 131 SITE 3 AC5 10 HOH E 301 HOH E 304 SITE 1 AC6 10 GLY F 10 THR F 11 PHE F 12 HIS F 19 SITE 2 AC6 10 ARG F 92 SER F 129 SER F 130 THR F 131 SITE 3 AC6 10 HOH F 312 HOH F 322 CRYST1 78.590 109.813 121.797 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012724 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009106 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008210 0.00000