HEADER OXIDOREDUCTASE 14-OCT-16 5H29 TITLE CRYSTAL STRUCTURE OF THE NTD_N/C DOMAIN OF ALKYLHYDROPEROXIDE TITLE 2 REDUCTASE AHPF FROM ENTEROCOCCUS FAECALIS (V583) COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN REDUCTASE/GLUTATHIONE-RELATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 354-560; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: ATCC 700802 / V583; SOURCE 5 ATCC: ATCC 700802; SOURCE 6 GENE: EF_2738; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET9D KEYWDS OXIDOREDUCTASE, ELECTRON DONOR, THIOREDOXIN FOLD, FAD BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.M.BALAKRISHNA,T.Y.KWANG,G.GRUBER REVDAT 2 08-NOV-23 5H29 1 REMARK REVDAT 1 22-NOV-17 5H29 0 JRNL AUTH Y.K.TOH,A.M.BALAKRISHNA,M.S.S.MANIMEKALAI,B.B.CHIONH, JRNL AUTH 2 R.R.C.SEETHARAMAN,F.EISENHABER,B.EISENHABER,G.GRUBER JRNL TITL NOVEL INSIGHTS INTO THE VANCOMYCIN-RESISTANT ENTEROCOCCUS JRNL TITL 2 FAECALIS (V583) ALKYLHYDROPEROXIDE REDUCTASE SUBUNIT F JRNL REF BIOCHIM. BIOPHYS. ACTA V.1861 3201 2017 JRNL REFN ISSN 0006-3002 JRNL PMID 28935609 JRNL DOI 10.1016/J.BBAGEN.2017.09.011 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18028 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 931 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1603 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.385 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1672 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1670 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2262 ; 0.947 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3874 ; 0.665 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 5.081 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;39.861 ;26.406 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 318 ;14.969 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 6.430 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 269 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1822 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 323 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 354 A 560 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7244 27.6550 -1.3995 REMARK 3 T TENSOR REMARK 3 T11: 0.0105 T22: 0.1879 REMARK 3 T33: 0.1999 T12: 0.0321 REMARK 3 T13: 0.0031 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.3421 L22: 0.6920 REMARK 3 L33: 1.6126 L12: 0.0386 REMARK 3 L13: -0.9400 L23: 0.3195 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: 0.3125 S13: 0.1315 REMARK 3 S21: 0.0585 S22: 0.1219 S23: -0.0661 REMARK 3 S31: -0.0123 S32: -0.0641 S33: -0.1487 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5H29 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1300001858. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19025 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZYN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS (PH 6.5), 2.0 M REMARK 280 AMMONIUM SULFATE AND 0.1 M SODIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.13900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.13900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.13900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.13900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 67.13900 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 67.13900 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 67.13900 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 67.13900 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 67.13900 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 67.13900 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 67.13900 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 67.13900 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 67.13900 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 100.70850 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 33.56950 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 100.70850 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 100.70850 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 100.70850 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 33.56950 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 100.70850 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 33.56950 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 100.70850 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 33.56950 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 100.70850 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 33.56950 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 33.56950 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 100.70850 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 33.56950 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 100.70850 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 100.70850 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 100.70850 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 33.56950 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 100.70850 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 100.70850 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 33.56950 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 33.56950 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 33.56950 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 100.70850 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 33.56950 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 100.70850 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 33.56950 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 100.70850 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 100.70850 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 100.70850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 343 REMARK 465 LYS A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 PRO A 351 REMARK 465 MET A 352 REMARK 465 ALA A 353 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 718 O HOH A 718 13455 1.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 424 -67.83 -120.63 REMARK 500 GLU A 543 -75.03 -123.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO A 603 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O5Q RELATED DB: PDB REMARK 900 ALKYLHYDROPEROXIDE REDUCTASE AHPF FROM ESCHERICHIA COLI DBREF 5H29 A 354 560 UNP Q830N9 Q830N9_ENTFA 354 560 SEQADV 5H29 MET A 343 UNP Q830N9 INITIATING METHIONINE SEQADV 5H29 LYS A 344 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 345 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 346 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 347 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 348 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 349 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 HIS A 350 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 PRO A 351 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 MET A 352 UNP Q830N9 EXPRESSION TAG SEQADV 5H29 ALA A 353 UNP Q830N9 EXPRESSION TAG SEQRES 1 A 218 MET LYS HIS HIS HIS HIS HIS HIS PRO MET ALA TRP PHE SEQRES 2 A 218 PRO GLU SER MET ARG GLN GLN LEU SER GLY ILE PHE ALA SEQRES 3 A 218 LYS LEU THR LYS LYS VAL THR LEU LEU GLN PHE LEU ASP SEQRES 4 A 218 ALA SER ASP GLU LYS SER LEU GLU LEU GLN SER PHE LEU SEQRES 5 A 218 THR GLU PHE ALA SER LEU ASP GLN LYS ILE THR LEU GLU SEQRES 6 A 218 THR ILE LEU LYS ASP THR GLU PRO ALA LYS GLU LEU LEU SEQRES 7 A 218 TYR GLY ILE GLU LYS MET PRO SER VAL VAL LEU LEU ASP SEQRES 8 A 218 ALA ALA GLY ASN TYR THR GLY ILE LYS PHE SER GLY ILE SEQRES 9 A 218 PRO SER GLY HIS GLU VAL ASN SER LEU VAL LEU ALA VAL SEQRES 10 A 218 TYR ASN VAL GLY SER GLU GLY GLN PRO LEU GLU ALA SER SEQRES 11 A 218 LEU GLN LYS ASN ILE LEU ALA LEU PRO LYS ARG LYS ILE SEQRES 12 A 218 GLU ILE PHE VAL SER LEU THR CYS HIS PHE CYS PRO ASP SEQRES 13 A 218 VAL VAL ALA ALA CYS GLN ARG ILE ALA SER ILE ASN PRO SEQRES 14 A 218 HIS VAL GLU ALA GLU MET VAL ASP ILE SER LEU PHE PRO SEQRES 15 A 218 GLU LEU LYS LYS GLU LYS LYS ILE MET SER VAL PRO ALA SEQRES 16 A 218 MET LEU ILE ASP GLY GLU GLN MET ILE PHE GLY SER LYS SEQRES 17 A 218 THR MET THR GLU ILE ILE GLU ALA LEU ALA HET SO4 A 601 5 HET TRS A 602 8 HET PRO A 603 8 HETNAM SO4 SULFATE ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM PRO PROLINE HETSYN TRS TRIS BUFFER FORMUL 2 SO4 O4 S 2- FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 PRO C5 H9 N O2 FORMUL 5 HOH *105(H2 O) HELIX 1 AA1 PRO A 356 ALA A 368 1 13 HELIX 2 AA2 ASP A 384 SER A 399 1 16 HELIX 3 AA3 GLU A 414 GLY A 422 1 9 HELIX 4 AA4 SER A 448 HIS A 450 5 3 HELIX 5 AA5 GLU A 451 GLY A 463 1 13 HELIX 6 AA6 GLU A 470 LEU A 480 1 11 HELIX 7 AA7 PHE A 495 ASN A 510 1 16 HELIX 8 AA8 PHE A 523 LYS A 531 1 9 HELIX 9 AA9 THR A 551 ALA A 560 1 10 SHEET 1 AA1 8 ILE A 404 LEU A 410 0 SHEET 2 AA1 8 VAL A 374 LEU A 380 1 N LEU A 376 O THR A 405 SHEET 3 AA1 8 SER A 428 LEU A 432 -1 O LEU A 432 N THR A 375 SHEET 4 AA1 8 TYR A 438 SER A 444 -1 O PHE A 443 N VAL A 429 SHEET 5 AA1 8 VAL A 513 ASP A 519 1 O MET A 517 N SER A 444 SHEET 6 AA1 8 ARG A 483 VAL A 489 1 N ILE A 485 O GLU A 514 SHEET 7 AA1 8 ALA A 537 ILE A 540 -1 O ALA A 537 N PHE A 488 SHEET 8 AA1 8 GLN A 544 PHE A 547 -1 O ILE A 546 N MET A 538 SSBOND 1 CYS A 493 CYS A 496 1555 1555 2.06 CISPEP 1 MET A 426 PRO A 427 0 -1.91 SITE 1 AC1 5 LYS A 373 LEU A 400 ASP A 401 GLN A 402 SITE 2 AC1 5 HOH A 745 SITE 1 AC2 4 PHE A 523 PRO A 524 GLU A 525 LEU A 526 SITE 1 AC3 3 LYS A 369 GLN A 467 LYS A 482 CRYST1 134.278 134.278 134.278 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007447 0.00000