HEADER PROTEIN TRANSPORT/TRANSFERASE 28-OCT-16 5H43 TITLE STRUCTURAL AND MECHANISTICAL STUDIES OF THE NUCLEAR IMPORT BY TITLE 2 IMPORTIN-ALPHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 70-497; COMPND 5 SYNONYM: KARYOPHERIN SUBUNIT ALPHA-2,RAG COHORT PROTEIN 1,SRP1-ALPHA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE ACETYLTRANSFERASE KAT8; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 140-149; COMPND 11 SYNONYM: LYSINE ACETYLTRANSFERASE 8,MOZ,YBF2/SAS3,SAS2 AND TIP60 COMPND 12 PROTEIN 1,HMOF; COMPND 13 EC: 2.3.1.48; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: HISTONE ACETYLTRANSFERASE KAT8; COMPND 17 CHAIN: C; COMPND 18 FRAGMENT: UNP RESIDUES 128-142; COMPND 19 SYNONYM: LYSINE ACETYLTRANSFERASE 8,MOZ,YBF2/SAS3,SAS2 AND TIP60 COMPND 20 PROTEIN 1,HMOF; COMPND 21 EC: 2.3.1.48; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KPNA2, RCH1, SRP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: KAT8, MOF, MYST1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET24A; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: KAT8, MOF, MYST1; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS IMPORTIN ALPHA, NUCLEAR IMPORT, PROTEIN TRANSPORT-TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.WANG,Y.LI REVDAT 4 08-NOV-23 5H43 1 REMARK REVDAT 3 03-JAN-18 5H43 1 JRNL REVDAT 2 13-DEC-17 5H43 1 JRNL REVDAT 1 25-OCT-17 5H43 0 JRNL AUTH W.ZHENG,R.WANG,X.LIU,S.TIAN,B.YAO,A.CHEN,S.JIN,Y.LI JRNL TITL STRUCTURAL INSIGHTS INTO THE NUCLEAR IMPORT OF THE HISTONE JRNL TITL 2 ACETYLTRANSFERASE MALES-ABSENT-ON-THE-FIRST BY IMPORTIN JRNL TITL 3 ALPHA 1 JRNL REF TRAFFIC V. 19 19 2018 JRNL REFN ESSN 1600-0854 JRNL PMID 28991411 JRNL DOI 10.1111/TRA.12534 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1301 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1831 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3560 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.287 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.164 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3526 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3477 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4800 ; 1.805 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8000 ; 1.038 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 450 ; 6.132 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;43.497 ;25.724 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;18.079 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;18.941 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 579 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3977 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 738 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1809 ; 6.667 ; 6.585 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1808 ; 6.664 ; 6.584 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2256 ; 9.049 ; 9.842 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2257 ; 9.049 ; 9.844 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1717 ; 7.274 ; 7.116 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1718 ; 7.272 ; 7.118 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2545 ;10.125 ;10.418 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4215 ;13.182 ;52.959 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4190 ;13.197 ;52.868 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5H43 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1300001972. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0-5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0050 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34657 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KND REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3%(V/V) TACSIMATE PH5.0, 0.1M SODIUM REMARK 280 CITRATE TRIBASIC DEHYDRATE PH5.6, 16%(W/V) PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.51700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.11100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.11100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.25850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.11100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.11100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 126.77550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.11100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.11100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.25850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.11100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.11100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 126.77550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.51700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 69 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 497 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 620 O HOH A 622 1.25 REMARK 500 O HOH A 603 O HOH A 612 2.04 REMARK 500 NH1 ARG A 238 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 207 O HOH B 207 7557 1.24 REMARK 500 O HOH A 551 O HOH A 576 7557 1.71 REMARK 500 ND2 ASN A 70 OD2 ASP A 263 3745 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 217 CG ASP A 217 OD1 0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 217 CB - CA - C ANGL. DEV. = -22.2 DEGREES REMARK 500 ASP A 217 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 144 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 109 74.40 58.36 REMARK 500 PRO A 111 80.89 -61.74 REMARK 500 ALA A 148 -6.45 -57.40 REMARK 500 ASN A 478 58.25 -93.59 REMARK 500 ASP B 147 -34.50 -37.65 REMARK 500 GLU C 129 -9.82 67.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 625 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 626 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH A 627 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A 628 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH A 629 DISTANCE = 7.58 ANGSTROMS REMARK 525 HOH B 207 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH C 209 DISTANCE = 7.69 ANGSTROMS REMARK 525 HOH C 210 DISTANCE = 7.85 ANGSTROMS DBREF 5H43 A 70 497 UNP P52292 IMA1_HUMAN 70 497 DBREF 5H43 B 140 149 UNP Q9H7Z6 KAT8_HUMAN 140 149 DBREF 5H43 C 128 142 UNP Q9H7Z6 KAT8_HUMAN 128 142 SEQADV 5H43 SER A 69 UNP P52292 EXPRESSION TAG SEQRES 1 A 429 SER ASN GLN GLY THR VAL ASN TRP SER VAL ASP ASP ILE SEQRES 2 A 429 VAL LYS GLY ILE ASN SER SER ASN VAL GLU ASN GLN LEU SEQRES 3 A 429 GLN ALA THR GLN ALA ALA ARG LYS LEU LEU SER ARG GLU SEQRES 4 A 429 LYS GLN PRO PRO ILE ASP ASN ILE ILE ARG ALA GLY LEU SEQRES 5 A 429 ILE PRO LYS PHE VAL SER PHE LEU GLY ARG THR ASP CYS SEQRES 6 A 429 SER PRO ILE GLN PHE GLU SER ALA TRP ALA LEU THR ASN SEQRES 7 A 429 ILE ALA SER GLY THR SER GLU GLN THR LYS ALA VAL VAL SEQRES 8 A 429 ASP GLY GLY ALA ILE PRO ALA PHE ILE SER LEU LEU ALA SEQRES 9 A 429 SER PRO HIS ALA HIS ILE SER GLU GLN ALA VAL TRP ALA SEQRES 10 A 429 LEU GLY ASN ILE ALA GLY ASP GLY SER VAL PHE ARG ASP SEQRES 11 A 429 LEU VAL ILE LYS TYR GLY ALA VAL ASP PRO LEU LEU ALA SEQRES 12 A 429 LEU LEU ALA VAL PRO ASP MET SER SER LEU ALA CYS GLY SEQRES 13 A 429 TYR LEU ARG ASN LEU THR TRP THR LEU SER ASN LEU CYS SEQRES 14 A 429 ARG ASN LYS ASN PRO ALA PRO PRO ILE ASP ALA VAL GLU SEQRES 15 A 429 GLN ILE LEU PRO THR LEU VAL ARG LEU LEU HIS HIS ASP SEQRES 16 A 429 ASP PRO GLU VAL LEU ALA ASP THR CYS TRP ALA ILE SER SEQRES 17 A 429 TYR LEU THR ASP GLY PRO ASN GLU ARG ILE GLY MET VAL SEQRES 18 A 429 VAL LYS THR GLY VAL VAL PRO GLN LEU VAL LYS LEU LEU SEQRES 19 A 429 GLY ALA SER GLU LEU PRO ILE VAL THR PRO ALA LEU ARG SEQRES 20 A 429 ALA ILE GLY ASN ILE VAL THR GLY THR ASP GLU GLN THR SEQRES 21 A 429 GLN VAL VAL ILE ASP ALA GLY ALA LEU ALA VAL PHE PRO SEQRES 22 A 429 SER LEU LEU THR ASN PRO LYS THR ASN ILE GLN LYS GLU SEQRES 23 A 429 ALA THR TRP THR MET SER ASN ILE THR ALA GLY ARG GLN SEQRES 24 A 429 ASP GLN ILE GLN GLN VAL VAL ASN HIS GLY LEU VAL PRO SEQRES 25 A 429 PHE LEU VAL SER VAL LEU SER LYS ALA ASP PHE LYS THR SEQRES 26 A 429 GLN LYS GLU ALA VAL TRP ALA VAL THR ASN TYR THR SER SEQRES 27 A 429 GLY GLY THR VAL GLU GLN ILE VAL TYR LEU VAL HIS CYS SEQRES 28 A 429 GLY ILE ILE GLU PRO LEU MET ASN LEU LEU THR ALA LYS SEQRES 29 A 429 ASP THR LYS ILE ILE LEU VAL ILE LEU ASP ALA ILE SER SEQRES 30 A 429 ASN ILE PHE GLN ALA ALA GLU LYS LEU GLY GLU THR GLU SEQRES 31 A 429 LYS LEU SER ILE MET ILE GLU GLU CYS GLY GLY LEU ASP SEQRES 32 A 429 LYS ILE GLU ALA LEU GLN ASN HIS GLU ASN GLU SER VAL SEQRES 33 A 429 TYR LYS ALA SER LEU SER LEU ILE GLU LYS TYR PHE SER SEQRES 1 B 10 ARG ASN GLN LYS ARG LYS HIS ASP GLU ILE SEQRES 1 C 15 SER GLU LEU ALA GLU GLN PRO GLU ARG LYS ILE THR ARG SEQRES 2 C 15 ASN GLN FORMUL 4 HOH *146(H2 O) HELIX 1 AA1 GLY A 72 TRP A 76 5 5 HELIX 2 AA2 SER A 77 SER A 87 1 11 HELIX 3 AA3 ASN A 89 SER A 105 1 17 HELIX 4 AA4 PRO A 111 ALA A 118 1 8 HELIX 5 AA5 LEU A 120 GLY A 129 1 10 HELIX 6 AA6 CYS A 133 ALA A 148 1 16 HELIX 7 AA7 THR A 151 GLY A 161 1 11 HELIX 8 AA8 GLY A 162 LEU A 171 1 10 HELIX 9 AA9 HIS A 175 GLY A 191 1 17 HELIX 10 AB1 GLY A 193 TYR A 203 1 11 HELIX 11 AB2 ALA A 205 ALA A 214 1 10 HELIX 12 AB3 ASP A 217 LEU A 221 5 5 HELIX 13 AB4 ALA A 222 CYS A 237 1 16 HELIX 14 AB5 PRO A 245 LEU A 260 1 16 HELIX 15 AB6 ASP A 264 THR A 279 1 16 HELIX 16 AB7 PRO A 282 LYS A 291 1 10 HELIX 17 AB8 VAL A 294 GLY A 303 1 10 HELIX 18 AB9 ILE A 309 VAL A 321 1 13 HELIX 19 AC1 THR A 324 GLY A 335 1 12 HELIX 20 AC2 ALA A 336 ALA A 338 5 3 HELIX 21 AC3 VAL A 339 ASN A 346 1 8 HELIX 22 AC4 LYS A 348 ALA A 364 1 17 HELIX 23 AC5 ARG A 366 HIS A 376 1 11 HELIX 24 AC6 LEU A 378 ALA A 389 1 12 HELIX 25 AC7 ASP A 390 GLY A 408 1 19 HELIX 26 AC8 THR A 409 CYS A 419 1 11 HELIX 27 AC9 ILE A 421 LEU A 428 1 8 HELIX 28 AD1 LEU A 429 ALA A 431 5 3 HELIX 29 AD2 ASP A 433 LEU A 454 1 22 HELIX 30 AD3 GLU A 456 CYS A 467 1 12 HELIX 31 AD4 GLY A 468 LEU A 476 1 9 HELIX 32 AD5 GLN A 477 HIS A 479 5 3 HELIX 33 AD6 ASN A 481 SER A 497 1 17 HELIX 34 AD7 LYS B 145 ILE B 149 5 5 CISPEP 1 ASN A 241 PRO A 242 0 -4.86 CISPEP 2 SER C 128 GLU C 129 0 9.72 CRYST1 82.222 82.222 169.034 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012162 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012162 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005916 0.00000