HEADER TRANSCRIPTION/DNA 04-NOV-16 5H58 TITLE STRUCTURAL AND DYNAMICS STUDIES OF THE TETR FAMILY PROTEIN, CPRB FROM TITLE 2 STREPTOMYCES COELICOLOR IN COMPLEX WITH ITS BIOLOGICAL OPERATOR TITLE 3 SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CPRB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*AP*GP*GP*C*AP*GP*GP*CP*GP*GP*CP*AP*CP*GP*GP*TP*CP*TP*GP*TP*TP*GP*A COMPND 8 P*GP*TP*TP*C)-3'); COMPND 9 CHAIN: E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(*GP*AP*A*CP*TP*CP*AP*AP*CP*AP*GP*AP*CP*CP*GP*TP*GP*CP*CP*GP*CP*CP*T COMPND 14 P*GP*CP*CP*T)-3'); COMPND 15 CHAIN: F; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 3 ORGANISM_TAXID: 100226; SOURCE 4 STRAIN: A3(2); SOURCE 5 GENE: CPRB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 12 ORGANISM_TAXID: 100226; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 16 ORGANISM_TAXID: 100226 KEYWDS TETR-FTR, CPRB-DNA COMPLEX, QUORUM SENSING, N-TERMINAL, STREPTOMYCES KEYWDS 2 COELICOLOR, GAMMA-BUTYROLACTONE RECEPTORS, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.BHUKYA,A.K.JANA,N.SENGUPTA,R.ANAND REVDAT 2 31-MAY-17 5H58 1 JRNL REVDAT 1 03-MAY-17 5H58 0 JRNL AUTH H.BHUKYA,A.K.JANA,N.SENGUPTA,R.ANAND JRNL TITL STRUCTURAL AND DYNAMICS STUDIES OF THE TETR FAMILY PROTEIN, JRNL TITL 2 CPRB FROM STREPTOMYCES COELICOLOR IN COMPLEX WITH ITS JRNL TITL 3 BIOLOGICAL OPERATOR SEQUENCE JRNL REF J. STRUCT. BIOL. V. 198 134 2017 JRNL REFN ESSN 1095-8657 JRNL PMID 28343010 JRNL DOI 10.1016/J.JSB.2017.03.006 REMARK 2 REMARK 2 RESOLUTION. 3.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 14937 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.720 REMARK 3 FREE R VALUE TEST SET COUNT : 1153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2510 - 7.9631 0.99 1705 139 0.1700 0.2179 REMARK 3 2 7.9631 - 6.3285 0.99 1726 146 0.2507 0.2807 REMARK 3 3 6.3285 - 5.5308 1.00 1741 132 0.2653 0.3694 REMARK 3 4 5.5308 - 5.0262 1.00 1730 140 0.2276 0.3029 REMARK 3 5 5.0262 - 4.6665 0.99 1713 146 0.2207 0.3240 REMARK 3 6 4.6665 - 4.3917 1.00 1710 150 0.2437 0.3255 REMARK 3 7 4.3917 - 4.1720 1.00 1738 148 0.2419 0.3190 REMARK 3 8 4.1720 - 3.9906 0.99 1721 152 0.2627 0.3496 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.610 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7088 REMARK 3 ANGLE : 0.559 9793 REMARK 3 CHIRALITY : 0.036 1149 REMARK 3 PLANARITY : 0.003 1111 REMARK 3 DIHEDRAL : 19.795 4119 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 28.5623 49.9099 -0.0142 REMARK 3 T TENSOR REMARK 3 T11: 1.5491 T22: 1.8444 REMARK 3 T33: 1.9014 T12: 0.2143 REMARK 3 T13: 0.1160 T23: -0.0809 REMARK 3 L TENSOR REMARK 3 L11: 3.6625 L22: 1.1467 REMARK 3 L33: -0.0998 L12: -2.3526 REMARK 3 L13: 0.8398 L23: -0.5627 REMARK 3 S TENSOR REMARK 3 S11: 0.1456 S12: -0.1408 S13: 0.4582 REMARK 3 S21: -0.2442 S22: -0.0906 S23: -0.2740 REMARK 3 S31: 0.3071 S32: -0.2163 S33: -0.0443 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5H58 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1300002049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9737 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15346 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.02 M REMARK 280 MGCL2.6H2O, 0.05 M HEPES SODIUM, 5% PEG 8000, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.97333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.48667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 113 REMARK 465 VAL A 114 REMARK 465 ARG A 165 REMARK 465 VAL A 166 REMARK 465 VAL A 167 REMARK 465 GLY A 168 REMARK 465 GLY A 169 REMARK 465 THR A 170 REMARK 465 LEU A 171 REMARK 465 GLU A 172 REMARK 465 PRO A 173 REMARK 465 ALA A 174 REMARK 465 GLY A 175 REMARK 465 THR A 212 REMARK 465 GLY A 213 REMARK 465 THR A 214 REMARK 465 ALA A 215 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ARG B 3 REMARK 465 GLN B 4 REMARK 465 VAL B 166 REMARK 465 VAL B 167 REMARK 465 GLY B 168 REMARK 465 GLY B 169 REMARK 465 GLY B 213 REMARK 465 THR B 214 REMARK 465 ALA B 215 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ARG C 3 REMARK 465 GLN C 4 REMARK 465 PRO C 115 REMARK 465 GLY C 168 REMARK 465 GLY C 169 REMARK 465 THR C 170 REMARK 465 LEU C 171 REMARK 465 GLU C 172 REMARK 465 PRO C 173 REMARK 465 ALA C 174 REMARK 465 GLY C 213 REMARK 465 THR C 214 REMARK 465 ALA C 215 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ARG D 3 REMARK 465 GLN D 4 REMARK 465 LEU D 5 REMARK 465 ARG D 6 REMARK 465 ALA D 7 REMARK 465 GLY D 77 REMARK 465 ARG D 78 REMARK 465 GLY D 79 REMARK 465 PRO D 118 REMARK 465 PRO D 119 REMARK 465 VAL D 167 REMARK 465 GLY D 168 REMARK 465 GLY D 169 REMARK 465 THR D 170 REMARK 465 LEU D 171 REMARK 465 GLU D 172 REMARK 465 PRO D 173 REMARK 465 GLY D 213 REMARK 465 THR D 214 REMARK 465 ALA D 215 REMARK 465 DA E 1 REMARK 465 DG E 2 REMARK 465 DG E 3 REMARK 465 DC E 4 REMARK 465 DT E 25 REMARK 465 DT E 26 REMARK 465 DC E 27 REMARK 465 DG F 1 REMARK 465 DA F 2 REMARK 465 DA F 3 REMARK 465 DC F 26 REMARK 465 DT F 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 5 CG CD1 CD2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 ARG A 66 CD NE CZ NH1 NH2 REMARK 470 MET A 93 CG SD CE REMARK 470 ARG A 95 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 117 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 120 CG CD1 CD2 REMARK 470 ARG A 179 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 LEU B 5 CG CD1 CD2 REMARK 470 ILE B 63 CG1 CG2 CD1 REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 470 ARG B 78 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 83 CG CD1 CD2 REMARK 470 ARG B 95 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 107 CG CD1 CD2 REMARK 470 VAL B 114 CG1 CG2 REMARK 470 VAL B 116 CG1 CG2 REMARK 470 ARG B 117 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 128 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 129 CG CD OE1 OE2 REMARK 470 ILE B 130 CG1 CG2 CD1 REMARK 470 ARG B 165 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 207 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 8 CG CD OE1 OE2 REMARK 470 GLU C 34 CG CD OE1 OE2 REMARK 470 VAL C 114 CG1 CG2 REMARK 470 VAL C 116 CG1 CG2 REMARK 470 GLU C 126 CG CD OE1 OE2 REMARK 470 ILE C 187 CG1 CG2 CD1 REMARK 470 MET C 192 SD CE REMARK 470 VAL C 193 CG1 CG2 REMARK 470 ARG C 200 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 95 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 103 CG CD1 CD2 REMARK 470 ARG D 200 CG CD NE CZ NH1 NH2 REMARK 470 DA E 5 P OP1 OP2 REMARK 470 DC F 4 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N4 DC E 11 O6 DG F 17 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG E 7 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA E 12 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC F 4 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 6 -89.94 -111.64 REMARK 500 ALA A 7 49.24 -82.54 REMARK 500 ARG A 25 -66.17 -155.44 REMARK 500 TYR A 27 -76.62 -79.05 REMARK 500 ALA A 57 49.67 -77.57 REMARK 500 HIS A 58 -20.05 -166.71 REMARK 500 ARG A 78 -100.69 -102.55 REMARK 500 GLN A 99 -76.30 -90.03 REMARK 500 VAL A 150 30.29 -85.68 REMARK 500 VAL A 153 -150.94 -147.27 REMARK 500 VAL A 158 -62.28 -109.57 REMARK 500 GLU A 177 -44.50 -140.13 REMARK 500 ARG A 190 48.92 -79.67 REMARK 500 ARG B 11 -46.68 -156.79 REMARK 500 TYR B 27 -78.08 -72.99 REMARK 500 SER B 29 -14.50 -158.47 REMARK 500 HIS B 38 71.97 -69.97 REMARK 500 ALA B 39 -66.28 -171.52 REMARK 500 ALA B 51 -72.15 -63.01 REMARK 500 ASP B 76 -122.60 -77.71 REMARK 500 TYR B 80 145.65 66.15 REMARK 500 SER B 82 -123.64 61.76 REMARK 500 VAL B 98 -54.64 -120.96 REMARK 500 VAL B 102 -76.02 -84.38 REMARK 500 ALA B 110 -1.62 -156.19 REMARK 500 ARG B 140 39.37 -91.88 REMARK 500 GLN B 141 4.91 -158.41 REMARK 500 LEU B 157 -72.91 -69.51 REMARK 500 VAL B 158 83.11 -64.64 REMARK 500 CYS B 159 -73.48 179.57 REMARK 500 VAL B 162 -85.02 -67.43 REMARK 500 THR B 164 -73.03 52.46 REMARK 500 ALA B 174 48.53 -81.04 REMARK 500 MET B 192 -56.76 -139.86 REMARK 500 PRO B 194 41.83 -73.50 REMARK 500 VAL B 195 -43.21 68.32 REMARK 500 GLN B 210 55.86 -93.60 REMARK 500 GLU C 28 37.42 -77.26 REMARK 500 SER C 29 -15.01 -159.37 REMARK 500 THR C 30 99.51 -68.60 REMARK 500 ALA C 51 -78.73 -63.29 REMARK 500 ASP C 76 -94.42 -68.80 REMARK 500 SER C 81 -160.79 -77.33 REMARK 500 ARG C 95 -76.11 -66.97 REMARK 500 VAL C 98 -47.32 -134.54 REMARK 500 LEU C 107 39.53 -79.87 REMARK 500 ARG C 108 -40.49 -147.63 REMARK 500 LEU C 109 68.82 -68.94 REMARK 500 PRO C 119 45.78 -90.03 REMARK 500 HIS C 122 115.68 65.52 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 5H58 A 1 215 UNP O66122 O66122_STRCH 1 215 DBREF 5H58 B 1 215 UNP O66122 O66122_STRCH 1 215 DBREF 5H58 C 1 215 UNP O66122 O66122_STRCH 1 215 DBREF 5H58 D 1 215 UNP O66122 O66122_STRCH 1 215 DBREF 5H58 E 1 27 PDB 5H58 5H58 1 27 DBREF 5H58 F 1 27 PDB 5H58 5H58 1 27 SEQRES 1 A 215 MET ALA ARG GLN LEU ARG ALA GLU GLN THR ARG ALA THR SEQRES 2 A 215 ILE ILE GLY ALA ALA ALA ASP LEU PHE ASP ARG ARG GLY SEQRES 3 A 215 TYR GLU SER THR THR LEU SER GLU ILE VAL ALA HIS ALA SEQRES 4 A 215 GLY VAL THR LYS GLY ALA LEU TYR PHE HIS PHE ALA ALA SEQRES 5 A 215 LYS GLU ASP LEU ALA HIS ALA ILE LEU GLU ILE GLN SER SEQRES 6 A 215 ARG THR SER ARG ARG LEU ALA LYS ASP LEU ASP GLY ARG SEQRES 7 A 215 GLY TYR SER SER LEU GLU ALA LEU MET ARG LEU THR PHE SEQRES 8 A 215 GLY MET ALA ARG LEU CYS VAL GLN GLY PRO VAL LEU ARG SEQRES 9 A 215 ALA GLY LEU ARG LEU ALA THR ALA GLY VAL PRO VAL ARG SEQRES 10 A 215 PRO PRO LEU PRO HIS PRO PHE THR GLU TRP ARG GLU ILE SEQRES 11 A 215 ALA THR SER ARG LEU LEU ASP ALA VAL ARG GLN SER ASP SEQRES 12 A 215 VAL HIS GLN ASP ILE ASP VAL ASP SER VAL ALA HIS THR SEQRES 13 A 215 LEU VAL CYS SER VAL VAL GLY THR ARG VAL VAL GLY GLY SEQRES 14 A 215 THR LEU GLU PRO ALA GLY ARG GLU PRO ARG ARG LEU ALA SEQRES 15 A 215 GLU MET TRP TYR ILE LEU ILE ARG GLY MET VAL PRO VAL SEQRES 16 A 215 THR ARG ARG ALA ARG TYR VAL THR LEU ALA ALA ARG LEU SEQRES 17 A 215 GLU GLN GLU THR GLY THR ALA SEQRES 1 B 215 MET ALA ARG GLN LEU ARG ALA GLU GLN THR ARG ALA THR SEQRES 2 B 215 ILE ILE GLY ALA ALA ALA ASP LEU PHE ASP ARG ARG GLY SEQRES 3 B 215 TYR GLU SER THR THR LEU SER GLU ILE VAL ALA HIS ALA SEQRES 4 B 215 GLY VAL THR LYS GLY ALA LEU TYR PHE HIS PHE ALA ALA SEQRES 5 B 215 LYS GLU ASP LEU ALA HIS ALA ILE LEU GLU ILE GLN SER SEQRES 6 B 215 ARG THR SER ARG ARG LEU ALA LYS ASP LEU ASP GLY ARG SEQRES 7 B 215 GLY TYR SER SER LEU GLU ALA LEU MET ARG LEU THR PHE SEQRES 8 B 215 GLY MET ALA ARG LEU CYS VAL GLN GLY PRO VAL LEU ARG SEQRES 9 B 215 ALA GLY LEU ARG LEU ALA THR ALA GLY VAL PRO VAL ARG SEQRES 10 B 215 PRO PRO LEU PRO HIS PRO PHE THR GLU TRP ARG GLU ILE SEQRES 11 B 215 ALA THR SER ARG LEU LEU ASP ALA VAL ARG GLN SER ASP SEQRES 12 B 215 VAL HIS GLN ASP ILE ASP VAL ASP SER VAL ALA HIS THR SEQRES 13 B 215 LEU VAL CYS SER VAL VAL GLY THR ARG VAL VAL GLY GLY SEQRES 14 B 215 THR LEU GLU PRO ALA GLY ARG GLU PRO ARG ARG LEU ALA SEQRES 15 B 215 GLU MET TRP TYR ILE LEU ILE ARG GLY MET VAL PRO VAL SEQRES 16 B 215 THR ARG ARG ALA ARG TYR VAL THR LEU ALA ALA ARG LEU SEQRES 17 B 215 GLU GLN GLU THR GLY THR ALA SEQRES 1 C 215 MET ALA ARG GLN LEU ARG ALA GLU GLN THR ARG ALA THR SEQRES 2 C 215 ILE ILE GLY ALA ALA ALA ASP LEU PHE ASP ARG ARG GLY SEQRES 3 C 215 TYR GLU SER THR THR LEU SER GLU ILE VAL ALA HIS ALA SEQRES 4 C 215 GLY VAL THR LYS GLY ALA LEU TYR PHE HIS PHE ALA ALA SEQRES 5 C 215 LYS GLU ASP LEU ALA HIS ALA ILE LEU GLU ILE GLN SER SEQRES 6 C 215 ARG THR SER ARG ARG LEU ALA LYS ASP LEU ASP GLY ARG SEQRES 7 C 215 GLY TYR SER SER LEU GLU ALA LEU MET ARG LEU THR PHE SEQRES 8 C 215 GLY MET ALA ARG LEU CYS VAL GLN GLY PRO VAL LEU ARG SEQRES 9 C 215 ALA GLY LEU ARG LEU ALA THR ALA GLY VAL PRO VAL ARG SEQRES 10 C 215 PRO PRO LEU PRO HIS PRO PHE THR GLU TRP ARG GLU ILE SEQRES 11 C 215 ALA THR SER ARG LEU LEU ASP ALA VAL ARG GLN SER ASP SEQRES 12 C 215 VAL HIS GLN ASP ILE ASP VAL ASP SER VAL ALA HIS THR SEQRES 13 C 215 LEU VAL CYS SER VAL VAL GLY THR ARG VAL VAL GLY GLY SEQRES 14 C 215 THR LEU GLU PRO ALA GLY ARG GLU PRO ARG ARG LEU ALA SEQRES 15 C 215 GLU MET TRP TYR ILE LEU ILE ARG GLY MET VAL PRO VAL SEQRES 16 C 215 THR ARG ARG ALA ARG TYR VAL THR LEU ALA ALA ARG LEU SEQRES 17 C 215 GLU GLN GLU THR GLY THR ALA SEQRES 1 D 215 MET ALA ARG GLN LEU ARG ALA GLU GLN THR ARG ALA THR SEQRES 2 D 215 ILE ILE GLY ALA ALA ALA ASP LEU PHE ASP ARG ARG GLY SEQRES 3 D 215 TYR GLU SER THR THR LEU SER GLU ILE VAL ALA HIS ALA SEQRES 4 D 215 GLY VAL THR LYS GLY ALA LEU TYR PHE HIS PHE ALA ALA SEQRES 5 D 215 LYS GLU ASP LEU ALA HIS ALA ILE LEU GLU ILE GLN SER SEQRES 6 D 215 ARG THR SER ARG ARG LEU ALA LYS ASP LEU ASP GLY ARG SEQRES 7 D 215 GLY TYR SER SER LEU GLU ALA LEU MET ARG LEU THR PHE SEQRES 8 D 215 GLY MET ALA ARG LEU CYS VAL GLN GLY PRO VAL LEU ARG SEQRES 9 D 215 ALA GLY LEU ARG LEU ALA THR ALA GLY VAL PRO VAL ARG SEQRES 10 D 215 PRO PRO LEU PRO HIS PRO PHE THR GLU TRP ARG GLU ILE SEQRES 11 D 215 ALA THR SER ARG LEU LEU ASP ALA VAL ARG GLN SER ASP SEQRES 12 D 215 VAL HIS GLN ASP ILE ASP VAL ASP SER VAL ALA HIS THR SEQRES 13 D 215 LEU VAL CYS SER VAL VAL GLY THR ARG VAL VAL GLY GLY SEQRES 14 D 215 THR LEU GLU PRO ALA GLY ARG GLU PRO ARG ARG LEU ALA SEQRES 15 D 215 GLU MET TRP TYR ILE LEU ILE ARG GLY MET VAL PRO VAL SEQRES 16 D 215 THR ARG ARG ALA ARG TYR VAL THR LEU ALA ALA ARG LEU SEQRES 17 D 215 GLU GLN GLU THR GLY THR ALA SEQRES 1 E 27 DA DG DG DC DA DG DG DC DG DG DC DA DC SEQRES 2 E 27 DG DG DT DC DT DG DT DT DG DA DG DT DT SEQRES 3 E 27 DC SEQRES 1 F 27 DG DA DA DC DT DC DA DA DC DA DG DA DC SEQRES 2 F 27 DC DG DT DG DC DC DG DC DC DT DG DC DC SEQRES 3 F 27 DT HELIX 1 AA1 GLU A 8 THR A 13 1 6 HELIX 2 AA2 THR A 13 ARG A 24 1 12 HELIX 3 AA3 THR A 31 HIS A 38 1 8 HELIX 4 AA4 THR A 42 TYR A 47 1 6 HELIX 5 AA5 ILE A 60 LEU A 75 1 16 HELIX 6 AA6 SER A 81 PHE A 91 1 11 HELIX 7 AA7 GLY A 100 ALA A 110 1 11 HELIX 8 AA8 HIS A 122 GLN A 141 1 20 HELIX 9 AA9 VAL A 158 GLY A 163 1 6 HELIX 10 AB1 PRO A 178 VAL A 193 1 16 HELIX 11 AB2 ARG A 197 LEU A 204 1 8 HELIX 12 AB3 LEU B 5 GLN B 9 5 5 HELIX 13 AB4 ARG B 11 GLY B 26 1 16 HELIX 14 AB5 THR B 31 VAL B 36 1 6 HELIX 15 AB6 THR B 42 PHE B 48 1 7 HELIX 16 AB7 GLU B 54 ALA B 59 1 6 HELIX 17 AB8 LEU B 61 ARG B 66 1 6 HELIX 18 AB9 SER B 81 LEU B 83 5 3 HELIX 19 AC1 GLU B 84 CYS B 97 1 14 HELIX 20 AC2 VAL B 102 LEU B 107 1 6 HELIX 21 AC3 ALA B 131 ARG B 140 1 10 HELIX 22 AC4 VAL B 153 VAL B 161 1 9 HELIX 23 AC5 ARG B 180 ILE B 189 1 10 HELIX 24 AC6 ARG B 190 MET B 192 5 3 HELIX 25 AC7 ARG B 198 ALA B 206 1 9 HELIX 26 AC8 ARG C 6 GLY C 26 1 21 HELIX 27 AC9 TYR C 27 THR C 30 5 4 HELIX 28 AD1 THR C 31 GLY C 40 1 10 HELIX 29 AD2 THR C 42 PHE C 48 1 7 HELIX 30 AD3 ALA C 59 LEU C 71 1 13 HELIX 31 AD4 LEU C 83 ALA C 94 1 12 HELIX 32 AD5 GLY C 100 LEU C 107 1 8 HELIX 33 AD6 PHE C 124 VAL C 139 1 16 HELIX 34 AD7 ASP C 149 VAL C 161 1 13 HELIX 35 AD8 ARG C 179 ARG C 190 1 12 HELIX 36 AD9 ARG C 197 VAL C 202 1 6 HELIX 37 AE1 VAL C 202 ARG C 207 1 6 HELIX 38 AE2 GLU D 8 THR D 13 5 6 HELIX 39 AE3 GLY D 16 ARG D 24 1 9 HELIX 40 AE4 THR D 31 GLY D 40 1 10 HELIX 41 AE5 ALA D 45 HIS D 49 5 5 HELIX 42 AE6 LYS D 53 ARG D 69 1 17 HELIX 43 AE7 LEU D 83 VAL D 98 1 16 HELIX 44 AE8 LEU D 103 ALA D 112 1 10 HELIX 45 AE9 GLU D 129 ASP D 137 1 9 HELIX 46 AF1 VAL D 150 HIS D 155 1 6 HELIX 47 AF2 GLU D 177 ILE D 189 1 13 HELIX 48 AF3 ARG D 198 ARG D 207 1 10 SSBOND 1 CYS A 159 CYS B 159 1555 1555 2.03 SSBOND 2 CYS C 159 CYS D 159 1555 1555 2.04 CISPEP 1 PRO A 118 PRO A 119 0 -2.72 CISPEP 2 ASP A 151 SER A 152 0 -8.67 CISPEP 3 PRO B 118 PRO B 119 0 -4.10 CISPEP 4 PRO C 118 PRO C 119 0 -0.19 CISPEP 5 GLY C 175 ARG C 176 0 0.77 CRYST1 149.810 149.810 70.460 90.00 90.00 120.00 P 32 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006675 0.003854 0.000000 0.00000 SCALE2 0.000000 0.007708 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014192 0.00000