HEADER OXIDOREDUCTASE/ELECTRON TRANSPORT 25-DEC-15 5H92 TITLE CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN MAIZE SULFITE REDUCTASE AND TITLE 2 FERREDOXIN IN THE FORM-3 CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFITE REDUCTASE [FERREDOXIN], CHLOROPLASTIC; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ZMSIR; COMPND 5 EC: 1.8.7.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: FERREDOXIN-1, CHLOROPLASTIC; COMPND 9 CHAIN: C; COMPND 10 SYNONYM: FERREDOXIN I,FD I; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_COMMON: MAIZE; SOURCE 4 ORGANISM_TAXID: 4577; SOURCE 5 GENE: SIR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 10 ORGANISM_COMMON: MAIZE; SOURCE 11 ORGANISM_TAXID: 4577; SOURCE 12 GENE: FDX1, PFD1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FERREDOXIN, SULFITE REDUCTASE, OXIDOREDUCTASE-ELECTRON TRANSPORT KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KURISU,M.NAKAYAMA,T.HASE REVDAT 6 13-NOV-24 5H92 1 REMARK REVDAT 5 27-DEC-23 5H92 1 COMPND FORMUL REVDAT 4 08-NOV-23 5H92 1 LINK REVDAT 3 19-FEB-20 5H92 1 REMARK REVDAT 2 10-AUG-16 5H92 1 JRNL REVDAT 1 13-APR-16 5H92 0 JRNL AUTH J.Y.KIM,M.NAKAYAMA,H.TOYOTA,G.KURISU,T.HASE JRNL TITL STRUCTURAL AND MUTATIONAL STUDIES OF AN ELECTRON TRANSFER JRNL TITL 2 COMPLEX OF MAIZE SULFITE REDUCTASE AND FERREDOXIN. JRNL REF J.BIOCHEM. V. 160 101 2016 JRNL REFN ISSN 0021-924X JRNL PMID 26920048 JRNL DOI 10.1093/JB/MVW016 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 75136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3972 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5374 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.1880 REMARK 3 BIN FREE R VALUE SET COUNT : 271 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9618 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 158 REMARK 3 SOLVENT ATOMS : 381 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9999 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13616 ; 1.751 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1232 ; 9.410 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 448 ;36.859 ;24.509 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1654 ;14.462 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;15.190 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1486 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7650 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4830 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6899 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 574 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.137 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.229 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.202 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6316 ; 1.074 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9916 ; 1.611 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4237 ; 2.813 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3670 ; 3.947 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 63 A 628 REMARK 3 RESIDUE RANGE : A 701 A 704 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5300 6.2020 22.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.0282 T22: -0.2175 REMARK 3 T33: -0.2324 T12: 0.0061 REMARK 3 T13: -0.0099 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.4767 L22: 0.6286 REMARK 3 L33: 0.4844 L12: -0.0985 REMARK 3 L13: -0.0553 L23: 0.1228 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: -0.0192 S13: 0.0494 REMARK 3 S21: 0.0254 S22: -0.0160 S23: 0.0537 REMARK 3 S31: -0.0444 S32: -0.0087 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 63 B 628 REMARK 3 RESIDUE RANGE : B 701 B 704 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3510 -39.4730 21.6530 REMARK 3 T TENSOR REMARK 3 T11: -0.0694 T22: -0.2557 REMARK 3 T33: -0.1325 T12: 0.0128 REMARK 3 T13: -0.0217 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.2482 L22: 0.9784 REMARK 3 L33: 0.5845 L12: -0.3584 REMARK 3 L13: 0.2745 L23: -0.1776 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.0274 S13: -0.2657 REMARK 3 S21: -0.0871 S22: 0.0215 S23: 0.1321 REMARK 3 S31: 0.0268 S32: 0.0282 S33: -0.0687 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 91 REMARK 3 RESIDUE RANGE : C 101 C 101 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6980 34.7410 6.7230 REMARK 3 T TENSOR REMARK 3 T11: 0.4420 T22: 0.3983 REMARK 3 T33: 0.4101 T12: -0.0233 REMARK 3 T13: -0.0330 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.3990 L22: 12.5348 REMARK 3 L33: 11.3364 L12: 2.1671 REMARK 3 L13: 3.1167 L23: -1.5214 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: 0.3875 S13: -0.0712 REMARK 3 S21: 0.6686 S22: -0.2349 S23: -0.1663 REMARK 3 S31: 0.1283 S32: 0.5858 S33: 0.2352 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5H92 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216678. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 579880 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5H8V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG4000, 0.05M SODIUM ACETATE, PH REMARK 280 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 51.70700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.21700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.70300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.21700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.70700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.70300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 53 REMARK 465 PRO A 54 REMARK 465 ALA A 55 REMARK 465 LYS A 56 REMARK 465 LYS A 57 REMARK 465 ASP A 58 REMARK 465 ALA A 59 REMARK 465 SER A 60 REMARK 465 GLU A 61 REMARK 465 VAL A 62 REMARK 465 GLU A 630 REMARK 465 SER A 631 REMARK 465 PRO A 632 REMARK 465 SER A 633 REMARK 465 ALA A 634 REMARK 465 ALA A 635 REMARK 465 ALA B 53 REMARK 465 PRO B 54 REMARK 465 ALA B 55 REMARK 465 LYS B 56 REMARK 465 LYS B 57 REMARK 465 ASP B 58 REMARK 465 ALA B 59 REMARK 465 SER B 60 REMARK 465 GLU B 61 REMARK 465 VAL B 62 REMARK 465 ALA B 635 REMARK 465 GLY C 97 REMARK 465 ALA C 98 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 GLU A 242 CG CD OE1 OE2 REMARK 470 LYS A 249 CD CE NZ REMARK 470 GLU A 326 CD OE1 OE2 REMARK 470 GLU A 401 CD OE1 OE2 REMARK 470 LYS A 627 CD CE NZ REMARK 470 LYS B 63 CE NZ REMARK 470 LYS B 66 CE NZ REMARK 470 GLU B 88 CD OE1 OE2 REMARK 470 ARG B 114 CD NE CZ NH1 NH2 REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 MET B 239 CG SD CE REMARK 470 GLU B 242 CG CD OE1 OE2 REMARK 470 ARG B 324 NE CZ NH1 NH2 REMARK 470 GLU B 326 CD OE1 OE2 REMARK 470 LYS B 392 CD CE NZ REMARK 470 GLU B 467 CG CD OE1 OE2 REMARK 470 GLN B 475 CD OE1 NE2 REMARK 470 LYS B 560 CE NZ REMARK 470 LYS B 584 CE NZ REMARK 470 LYS B 627 CD CE NZ REMARK 470 ASN C 4 CG OD1 ND2 REMARK 470 LYS C 6 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 123 CA - CB - CG ANGL. DEV. = 18.1 DEGREES REMARK 500 ARG B 193 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 SER B 631 N - CA - C ANGL. DEV. = 21.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 116 126.44 174.08 REMARK 500 ASN A 127 78.93 -151.04 REMARK 500 TYR A 272 -149.99 44.25 REMARK 500 ASP A 303 151.90 -27.50 REMARK 500 ALA A 496 -132.40 57.40 REMARK 500 ALA A 507 -77.46 -140.91 REMARK 500 LYS B 117 81.55 71.27 REMARK 500 MET B 239 -86.10 -47.32 REMARK 500 SER B 240 135.51 67.75 REMARK 500 TYR B 272 -148.49 52.60 REMARK 500 LYS B 276 152.35 -49.93 REMARK 500 ALA B 284 128.64 -39.76 REMARK 500 ASP B 303 118.46 26.43 REMARK 500 LYS B 391 -178.51 -174.71 REMARK 500 ALA B 496 -134.80 52.74 REMARK 500 ALA B 507 -80.13 -141.90 REMARK 500 GLU B 630 36.69 -146.02 REMARK 500 SER B 631 137.37 -25.09 REMARK 500 SER B 633 94.06 -65.75 REMARK 500 SER C 38 -73.21 -146.00 REMARK 500 ARG C 40 29.96 47.13 REMARK 500 SER C 62 -15.13 -150.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 302 ASP A 303 125.54 REMARK 500 ASN A 626 LYS A 627 -142.52 REMARK 500 SER B 302 ASP B 303 97.10 REMARK 500 GLU B 630 SER B 631 94.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 704 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 424 O REMARK 620 2 ASN A 453 O 128.1 REMARK 620 3 HOH A 825 O 109.9 113.6 REMARK 620 4 HOH A 884 O 86.9 89.6 126.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 494 SG REMARK 620 2 SF4 A 701 S1 104.8 REMARK 620 3 SF4 A 701 S2 120.6 104.7 REMARK 620 4 SF4 A 701 S4 112.1 110.2 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 500 SG REMARK 620 2 SF4 A 701 S1 120.5 REMARK 620 3 SF4 A 701 S2 118.1 104.3 REMARK 620 4 SF4 A 701 S3 103.2 101.2 107.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 540 SG REMARK 620 2 SF4 A 701 S2 115.7 REMARK 620 3 SF4 A 701 S3 106.4 107.3 REMARK 620 4 SF4 A 701 S4 119.9 101.9 104.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 544 SG REMARK 620 2 SF4 A 701 S1 115.6 REMARK 620 3 SF4 A 701 S3 122.3 101.5 REMARK 620 4 SF4 A 701 S4 101.9 109.2 105.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SRM A 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 544 SG REMARK 620 2 SRM A 702 NA 87.6 REMARK 620 3 SRM A 702 NB 93.9 88.7 REMARK 620 4 SRM A 702 NC 88.1 175.6 90.5 REMARK 620 5 SRM A 702 ND 83.1 89.9 176.8 90.5 REMARK 620 6 PO4 A 703 O1 175.6 89.2 83.1 95.1 99.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 704 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 424 O REMARK 620 2 ASN B 453 O 123.2 REMARK 620 3 HOH B 832 O 113.8 112.8 REMARK 620 4 HOH B 890 O 83.6 93.3 126.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 701 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 494 SG REMARK 620 2 SF4 B 701 S1 106.7 REMARK 620 3 SF4 B 701 S2 118.8 103.8 REMARK 620 4 SF4 B 701 S4 111.9 111.2 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 701 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 500 SG REMARK 620 2 SF4 B 701 S1 120.8 REMARK 620 3 SF4 B 701 S2 118.0 104.4 REMARK 620 4 SF4 B 701 S3 101.6 102.6 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 701 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 540 SG REMARK 620 2 SF4 B 701 S2 115.0 REMARK 620 3 SF4 B 701 S3 107.3 107.7 REMARK 620 4 SF4 B 701 S4 118.7 103.8 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 701 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 544 SG REMARK 620 2 SF4 B 701 S1 118.5 REMARK 620 3 SF4 B 701 S3 121.0 102.0 REMARK 620 4 SF4 B 701 S4 99.0 110.5 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SRM B 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 544 SG REMARK 620 2 SRM B 702 NA 88.6 REMARK 620 3 SRM B 702 NB 92.5 87.2 REMARK 620 4 SRM B 702 NC 87.2 175.2 90.6 REMARK 620 5 SRM B 702 ND 81.6 91.1 173.9 90.7 REMARK 620 6 PO4 B 703 O1 171.2 83.8 82.6 100.1 103.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 101 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 39 SG REMARK 620 2 FES C 101 S1 105.6 REMARK 620 3 FES C 101 S2 120.1 90.8 REMARK 620 4 CYS C 44 SG 117.4 101.4 114.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 101 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 47 SG REMARK 620 2 FES C 101 S1 106.6 REMARK 620 3 FES C 101 S2 119.8 93.0 REMARK 620 4 CYS C 77 SG 102.3 111.7 122.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SRM A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SRM B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES C 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B2F RELATED DB: PDB REMARK 900 3B2F IS CONTAINED IN THE COMPLEX REMARK 900 RELATED ID: 5H8V RELATED DB: PDB REMARK 900 RELATED ID: 5H8Y RELATED DB: PDB DBREF 5H92 A 53 635 UNP O23813 SIR_MAIZE 53 635 DBREF 5H92 B 53 635 UNP O23813 SIR_MAIZE 53 635 DBREF 5H92 C 1 98 UNP P27787 FER1_MAIZE 53 150 SEQRES 1 A 583 ALA PRO ALA LYS LYS ASP ALA SER GLU VAL LYS ARG SER SEQRES 2 A 583 LYS VAL GLU ILE ILE LYS GLU LYS SER ASN PHE LEU ARG SEQRES 3 A 583 TYR PRO LEU ASN GLU GLU LEU VAL SER GLU ALA PRO ASN SEQRES 4 A 583 ILE ASN GLU SER ALA VAL GLN LEU ILE LYS PHE HIS GLY SEQRES 5 A 583 SER TYR GLN GLN THR ASP ARG ASP VAL ARG GLY GLN LYS SEQRES 6 A 583 ASN TYR SER PHE MET LEU ARG THR LYS ASN PRO CYS GLY SEQRES 7 A 583 LYS VAL PRO ASN GLN LEU TYR LEU ALA MET ASP THR LEU SEQRES 8 A 583 ALA ASP GLU PHE GLY ILE GLY THR LEU ARG LEU THR THR SEQRES 9 A 583 ARG GLN THR PHE GLN LEU HIS GLY VAL LEU LYS LYS ASN SEQRES 10 A 583 LEU LYS THR VAL LEU SER THR VAL ILE LYS ASN MET GLY SEQRES 11 A 583 SER THR LEU GLY ALA CYS GLY ASP LEU ASN ARG ASN VAL SEQRES 12 A 583 LEU ALA PRO ALA ALA PRO TYR VAL LYS LYS ASP ILE LEU SEQRES 13 A 583 PHE ALA GLN GLN THR ALA GLU ASN ILE ALA ALA LEU LEU SEQRES 14 A 583 THR PRO GLN SER GLY ALA TYR TYR ASP LEU TRP VAL ASP SEQRES 15 A 583 GLY GLU LYS ILE MET SER ALA GLU GLU PRO PRO GLU VAL SEQRES 16 A 583 THR LYS ALA ARG ASN ASP ASN SER HIS GLY THR ASN PHE SEQRES 17 A 583 PRO ASP SER PRO GLU PRO ILE TYR GLY THR GLN TYR LEU SEQRES 18 A 583 PRO ARG LYS PHE LYS VAL ALA VAL THR ALA ALA GLY ASP SEQRES 19 A 583 ASN SER VAL ASP ILE LEU THR ASN ASP ILE GLY VAL VAL SEQRES 20 A 583 VAL VAL SER ASP ASP ALA GLY GLU PRO ILE GLY PHE ASN SEQRES 21 A 583 ILE TYR VAL GLY GLY GLY MET GLY ARG THR HIS ARG VAL SEQRES 22 A 583 GLU THR THR PHE PRO ARG LEU ALA ASP PRO LEU GLY TYR SEQRES 23 A 583 VAL PRO LYS GLU ASP ILE LEU TYR ALA ILE LYS ALA ILE SEQRES 24 A 583 VAL VAL THR GLN ARG GLU ASN GLY ARG ARG ASP ASP ARG SEQRES 25 A 583 LYS TYR SER ARG MET LYS TYR MET ILE ASP ARG TRP GLY SEQRES 26 A 583 ILE ASP ARG PHE ARG ALA GLU VAL GLU LYS TYR TYR GLY SEQRES 27 A 583 LYS LYS PHE GLU SER PHE ARG PRO LEU PRO GLU TRP GLN SEQRES 28 A 583 PHE ASN SER TYR LEU GLY TRP GLN GLU GLN GLY ASP GLY SEQRES 29 A 583 LYS LEU PHE TYR GLY VAL HIS VAL ASP ASN GLY ARG VAL SEQRES 30 A 583 GLY GLY GLN ALA LYS LYS THR LEU ARG GLU ILE ILE GLU SEQRES 31 A 583 LYS TYR ASN LEU ASP VAL SER ILE THR PRO ASN GLN ASN SEQRES 32 A 583 LEU ILE LEU CYS GLY ILE ASP GLN ALA TRP ARG GLU PRO SEQRES 33 A 583 ILE THR THR ALA LEU ALA GLN ALA GLY LEU LEU GLU PRO SEQRES 34 A 583 LYS ASP VAL ASP PRO LEU ASN LEU THR ALA MET ALA CYS SEQRES 35 A 583 PRO ALA LEU PRO LEU CYS PRO LEU ALA GLN THR GLU ALA SEQRES 36 A 583 GLU ARG GLY ILE LEU PRO ILE LEU LYS ARG ILE ARG ALA SEQRES 37 A 583 VAL PHE ASN LYS VAL GLY ILE LYS ASP SER GLU SER VAL SEQRES 38 A 583 VAL VAL ARG ILE THR GLY CYS PRO ASN GLY CYS ALA ARG SEQRES 39 A 583 PRO TYR MET ALA GLU LEU GLY PHE VAL GLY ASP GLY PRO SEQRES 40 A 583 LYS SER TYR GLN ILE TRP LEU GLY GLY THR PRO ASN GLN SEQRES 41 A 583 SER THR LEU ALA GLU SER PHE MET ASP LYS VAL LYS LEU SEQRES 42 A 583 ASP ASP ILE GLU LYS VAL LEU GLU PRO LEU PHE THR TYR SEQRES 43 A 583 TRP ASN GLY THR ARG GLN GLU GLY GLU SER PHE GLY SER SEQRES 44 A 583 PHE THR ASN ARG THR GLY PHE ASP LYS LEU LYS GLU VAL SEQRES 45 A 583 VAL ASN LYS TRP ALA GLU SER PRO SER ALA ALA SEQRES 1 B 583 ALA PRO ALA LYS LYS ASP ALA SER GLU VAL LYS ARG SER SEQRES 2 B 583 LYS VAL GLU ILE ILE LYS GLU LYS SER ASN PHE LEU ARG SEQRES 3 B 583 TYR PRO LEU ASN GLU GLU LEU VAL SER GLU ALA PRO ASN SEQRES 4 B 583 ILE ASN GLU SER ALA VAL GLN LEU ILE LYS PHE HIS GLY SEQRES 5 B 583 SER TYR GLN GLN THR ASP ARG ASP VAL ARG GLY GLN LYS SEQRES 6 B 583 ASN TYR SER PHE MET LEU ARG THR LYS ASN PRO CYS GLY SEQRES 7 B 583 LYS VAL PRO ASN GLN LEU TYR LEU ALA MET ASP THR LEU SEQRES 8 B 583 ALA ASP GLU PHE GLY ILE GLY THR LEU ARG LEU THR THR SEQRES 9 B 583 ARG GLN THR PHE GLN LEU HIS GLY VAL LEU LYS LYS ASN SEQRES 10 B 583 LEU LYS THR VAL LEU SER THR VAL ILE LYS ASN MET GLY SEQRES 11 B 583 SER THR LEU GLY ALA CYS GLY ASP LEU ASN ARG ASN VAL SEQRES 12 B 583 LEU ALA PRO ALA ALA PRO TYR VAL LYS LYS ASP ILE LEU SEQRES 13 B 583 PHE ALA GLN GLN THR ALA GLU ASN ILE ALA ALA LEU LEU SEQRES 14 B 583 THR PRO GLN SER GLY ALA TYR TYR ASP LEU TRP VAL ASP SEQRES 15 B 583 GLY GLU LYS ILE MET SER ALA GLU GLU PRO PRO GLU VAL SEQRES 16 B 583 THR LYS ALA ARG ASN ASP ASN SER HIS GLY THR ASN PHE SEQRES 17 B 583 PRO ASP SER PRO GLU PRO ILE TYR GLY THR GLN TYR LEU SEQRES 18 B 583 PRO ARG LYS PHE LYS VAL ALA VAL THR ALA ALA GLY ASP SEQRES 19 B 583 ASN SER VAL ASP ILE LEU THR ASN ASP ILE GLY VAL VAL SEQRES 20 B 583 VAL VAL SER ASP ASP ALA GLY GLU PRO ILE GLY PHE ASN SEQRES 21 B 583 ILE TYR VAL GLY GLY GLY MET GLY ARG THR HIS ARG VAL SEQRES 22 B 583 GLU THR THR PHE PRO ARG LEU ALA ASP PRO LEU GLY TYR SEQRES 23 B 583 VAL PRO LYS GLU ASP ILE LEU TYR ALA ILE LYS ALA ILE SEQRES 24 B 583 VAL VAL THR GLN ARG GLU ASN GLY ARG ARG ASP ASP ARG SEQRES 25 B 583 LYS TYR SER ARG MET LYS TYR MET ILE ASP ARG TRP GLY SEQRES 26 B 583 ILE ASP ARG PHE ARG ALA GLU VAL GLU LYS TYR TYR GLY SEQRES 27 B 583 LYS LYS PHE GLU SER PHE ARG PRO LEU PRO GLU TRP GLN SEQRES 28 B 583 PHE ASN SER TYR LEU GLY TRP GLN GLU GLN GLY ASP GLY SEQRES 29 B 583 LYS LEU PHE TYR GLY VAL HIS VAL ASP ASN GLY ARG VAL SEQRES 30 B 583 GLY GLY GLN ALA LYS LYS THR LEU ARG GLU ILE ILE GLU SEQRES 31 B 583 LYS TYR ASN LEU ASP VAL SER ILE THR PRO ASN GLN ASN SEQRES 32 B 583 LEU ILE LEU CYS GLY ILE ASP GLN ALA TRP ARG GLU PRO SEQRES 33 B 583 ILE THR THR ALA LEU ALA GLN ALA GLY LEU LEU GLU PRO SEQRES 34 B 583 LYS ASP VAL ASP PRO LEU ASN LEU THR ALA MET ALA CYS SEQRES 35 B 583 PRO ALA LEU PRO LEU CYS PRO LEU ALA GLN THR GLU ALA SEQRES 36 B 583 GLU ARG GLY ILE LEU PRO ILE LEU LYS ARG ILE ARG ALA SEQRES 37 B 583 VAL PHE ASN LYS VAL GLY ILE LYS ASP SER GLU SER VAL SEQRES 38 B 583 VAL VAL ARG ILE THR GLY CYS PRO ASN GLY CYS ALA ARG SEQRES 39 B 583 PRO TYR MET ALA GLU LEU GLY PHE VAL GLY ASP GLY PRO SEQRES 40 B 583 LYS SER TYR GLN ILE TRP LEU GLY GLY THR PRO ASN GLN SEQRES 41 B 583 SER THR LEU ALA GLU SER PHE MET ASP LYS VAL LYS LEU SEQRES 42 B 583 ASP ASP ILE GLU LYS VAL LEU GLU PRO LEU PHE THR TYR SEQRES 43 B 583 TRP ASN GLY THR ARG GLN GLU GLY GLU SER PHE GLY SER SEQRES 44 B 583 PHE THR ASN ARG THR GLY PHE ASP LYS LEU LYS GLU VAL SEQRES 45 B 583 VAL ASN LYS TRP ALA GLU SER PRO SER ALA ALA SEQRES 1 C 98 ALA THR TYR ASN VAL LYS LEU ILE THR PRO GLU GLY GLU SEQRES 2 C 98 VAL GLU LEU GLN VAL PRO ASP ASP VAL TYR ILE LEU ASP SEQRES 3 C 98 GLN ALA GLU GLU ASP GLY ILE ASP LEU PRO TYR SER CYS SEQRES 4 C 98 ARG ALA GLY SER CYS SER SER CYS ALA GLY LYS VAL VAL SEQRES 5 C 98 SER GLY SER VAL ASP GLN SER ASP GLN SER TYR LEU ASP SEQRES 6 C 98 ASP GLY GLN ILE ALA ASP GLY TRP VAL LEU THR CYS HIS SEQRES 7 C 98 ALA TYR PRO THR SER ASP VAL VAL ILE GLU THR HIS LYS SEQRES 8 C 98 GLU GLU GLU LEU THR GLY ALA HET SF4 A 701 8 HET SRM A 702 63 HET PO4 A 703 5 HET MG A 704 1 HET SF4 B 701 8 HET SRM B 702 63 HET PO4 B 703 5 HET MG B 704 1 HET FES C 101 4 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM SRM SIROHEME HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 4 SF4 2(FE4 S4) FORMUL 5 SRM 2(C42 H44 FE N4 O16) FORMUL 6 PO4 2(O4 P 3-) FORMUL 7 MG 2(MG 2+) FORMUL 12 FES FE2 S2 FORMUL 13 HOH *381(H2 O) HELIX 1 AA1 SER A 65 LYS A 73 1 9 HELIX 2 AA2 PRO A 80 LEU A 85 1 6 HELIX 3 AA3 ASN A 93 LYS A 101 1 9 HELIX 4 AA4 ASN A 127 CYS A 129 5 3 HELIX 5 AA5 PRO A 133 GLY A 148 1 16 HELIX 6 AA6 LEU A 166 LYS A 168 5 3 HELIX 7 AA7 ASN A 169 LYS A 179 1 11 HELIX 8 AA8 LYS A 204 LEU A 221 1 18 HELIX 9 AA9 GLY A 226 VAL A 233 1 8 HELIX 10 AB1 PRO A 244 ASP A 253 1 10 HELIX 11 AB2 ASP A 290 ASN A 294 5 5 HELIX 12 AB3 ASP A 343 GLY A 359 1 17 HELIX 13 AB4 ASP A 363 SER A 367 5 5 HELIX 14 AB5 ARG A 368 GLY A 377 1 10 HELIX 15 AB6 GLY A 377 GLY A 390 1 14 HELIX 16 AB7 VAL A 424 ASN A 426 5 3 HELIX 17 AB8 GLY A 430 TYR A 444 1 15 HELIX 18 AB9 ASP A 462 ALA A 464 5 3 HELIX 19 AC1 TRP A 465 ALA A 476 1 12 HELIX 20 AC2 GLU A 480 VAL A 484 5 5 HELIX 21 AC3 ASP A 485 ALA A 491 1 7 HELIX 22 AC4 ALA A 507 GLY A 526 1 20 HELIX 23 AC5 ARG A 546 ALA A 550 5 5 HELIX 24 AC6 ASP A 587 ARG A 603 1 17 HELIX 25 AC7 SER A 608 GLY A 617 1 10 HELIX 26 AC8 GLY A 617 ALA A 629 1 13 HELIX 27 AC9 SER B 65 LYS B 73 1 9 HELIX 28 AD1 PRO B 80 VAL B 86 1 7 HELIX 29 AD2 ASN B 93 LYS B 101 1 9 HELIX 30 AD3 ASN B 127 CYS B 129 5 3 HELIX 31 AD4 PRO B 133 PHE B 147 1 15 HELIX 32 AD5 LEU B 166 LYS B 179 1 14 HELIX 33 AD6 LYS B 204 LEU B 221 1 18 HELIX 34 AD7 GLY B 226 VAL B 233 1 8 HELIX 35 AD8 PRO B 244 ASP B 253 1 10 HELIX 36 AD9 ASP B 290 ASN B 294 5 5 HELIX 37 AE1 ASP B 343 GLY B 359 1 17 HELIX 38 AE2 ASP B 363 SER B 367 5 5 HELIX 39 AE3 ARG B 368 GLY B 377 1 10 HELIX 40 AE4 GLY B 377 GLY B 390 1 14 HELIX 41 AE5 VAL B 424 ASN B 426 5 3 HELIX 42 AE6 GLY B 430 TYR B 444 1 15 HELIX 43 AE7 ASP B 462 ALA B 464 5 3 HELIX 44 AE8 TRP B 465 ALA B 476 1 12 HELIX 45 AE9 GLU B 480 VAL B 484 5 5 HELIX 46 AF1 ASP B 485 THR B 490 1 6 HELIX 47 AF2 ALA B 507 GLY B 526 1 20 HELIX 48 AF3 ARG B 546 ALA B 550 5 5 HELIX 49 AF4 ASP B 587 ARG B 603 1 17 HELIX 50 AF5 SER B 608 GLY B 617 1 10 HELIX 51 AF6 GLY B 617 ALA B 629 1 13 HELIX 52 AF7 TYR C 23 GLY C 32 1 10 HELIX 53 AF8 ASP C 65 ASP C 71 1 7 HELIX 54 AF9 CYS C 77 ALA C 79 5 3 SHEET 1 AA1 5 SER A 105 THR A 109 0 SHEET 2 AA1 5 TYR A 119 ARG A 124 -1 O SER A 120 N GLN A 108 SHEET 3 AA1 5 PHE A 160 VAL A 165 -1 O LEU A 162 N LEU A 123 SHEET 4 AA1 5 LEU A 152 LEU A 154 -1 N ARG A 153 O GLN A 161 SHEET 5 AA1 5 ARG A 428 VAL A 429 -1 O VAL A 429 N LEU A 152 SHEET 1 AA2 5 LYS A 131 VAL A 132 0 SHEET 2 AA2 5 VAL A 448 ILE A 450 -1 O VAL A 448 N VAL A 132 SHEET 3 AA2 5 LEU A 456 ILE A 461 -1 O ILE A 457 N SER A 449 SHEET 4 AA2 5 LEU A 418 VAL A 422 -1 N VAL A 422 O LEU A 456 SHEET 5 AA2 5 GLY A 409 GLU A 412 -1 N GLN A 411 O PHE A 419 SHEET 1 AA3 4 VAL A 279 ALA A 283 0 SHEET 2 AA3 4 ILE A 296 SER A 302 1 O VAL A 300 N THR A 282 SHEET 3 AA3 4 PRO A 308 VAL A 315 -1 O ILE A 309 N VAL A 301 SHEET 4 AA3 4 ASP A 334 PRO A 340 -1 O LEU A 336 N ILE A 313 SHEET 1 AA4 5 MET A 492 ALA A 493 0 SHEET 2 AA4 5 VAL A 535 THR A 538 1 O ILE A 537 N MET A 492 SHEET 3 AA4 5 LEU A 552 GLY A 558 1 O PHE A 554 N THR A 538 SHEET 4 AA4 5 SER A 561 LEU A 566 -1 O GLN A 563 N VAL A 555 SHEET 5 AA4 5 GLU A 577 LYS A 584 -1 O PHE A 579 N ILE A 564 SHEET 1 AA5 5 SER B 105 GLN B 108 0 SHEET 2 AA5 5 SER B 120 ARG B 124 -1 O SER B 120 N GLN B 108 SHEET 3 AA5 5 PHE B 160 VAL B 165 -1 O VAL B 165 N PHE B 121 SHEET 4 AA5 5 LEU B 152 LEU B 154 -1 N ARG B 153 O GLN B 161 SHEET 5 AA5 5 ARG B 428 VAL B 429 -1 O VAL B 429 N LEU B 152 SHEET 1 AA6 5 LYS B 131 VAL B 132 0 SHEET 2 AA6 5 VAL B 448 ILE B 450 -1 O VAL B 448 N VAL B 132 SHEET 3 AA6 5 LEU B 456 ILE B 461 -1 O ILE B 457 N SER B 449 SHEET 4 AA6 5 LEU B 418 VAL B 422 -1 N VAL B 422 O LEU B 456 SHEET 5 AA6 5 GLY B 409 GLU B 412 -1 N GLN B 411 O PHE B 419 SHEET 1 AA7 4 VAL B 279 ALA B 283 0 SHEET 2 AA7 4 ILE B 296 SER B 302 1 O VAL B 298 N ALA B 280 SHEET 3 AA7 4 PRO B 308 VAL B 315 -1 O ILE B 309 N VAL B 301 SHEET 4 AA7 4 ASP B 334 PRO B 340 -1 O ASP B 334 N VAL B 315 SHEET 1 AA8 5 MET B 492 ALA B 493 0 SHEET 2 AA8 5 VAL B 535 THR B 538 1 O ILE B 537 N MET B 492 SHEET 3 AA8 5 LEU B 552 GLY B 558 1 O PHE B 554 N ARG B 536 SHEET 4 AA8 5 SER B 561 LEU B 566 -1 O GLN B 563 N VAL B 555 SHEET 5 AA8 5 GLU B 577 LYS B 584 -1 O PHE B 579 N ILE B 564 SHEET 1 AA9 5 GLU C 13 PRO C 19 0 SHEET 2 AA9 5 THR C 2 ILE C 8 -1 N VAL C 5 O LEU C 16 SHEET 3 AA9 5 VAL C 85 GLU C 88 1 O ILE C 87 N ILE C 8 SHEET 4 AA9 5 ALA C 48 SER C 53 -1 N SER C 53 O VAL C 86 SHEET 5 AA9 5 TRP C 73 LEU C 75 -1 O VAL C 74 N GLY C 49 SHEET 1 AB1 2 VAL C 56 ASP C 57 0 SHEET 2 AB1 2 TYR C 80 PRO C 81 -1 O TYR C 80 N ASP C 57 LINK CE1 TYR A 106 SG CYS A 188 1555 1555 1.88 LINK CE1 TYR B 106 SG CYS B 188 1555 1555 1.84 LINK O VAL A 424 MG MG A 704 1555 1555 2.74 LINK O ASN A 453 MG MG A 704 1555 1555 2.61 LINK SG CYS A 494 FE3 SF4 A 701 1555 1555 2.22 LINK SG CYS A 500 FE4 SF4 A 701 1555 1555 2.22 LINK SG CYS A 540 FE1 SF4 A 701 1555 1555 2.33 LINK SG CYS A 544 FE2 SF4 A 701 1555 1555 2.23 LINK SG CYS A 544 FE SRM A 702 1555 1555 2.43 LINK FE SRM A 702 O1 PO4 A 703 1555 1555 1.98 LINK MG MG A 704 O HOH A 825 1555 1555 2.95 LINK MG MG A 704 O HOH A 884 1555 1555 2.68 LINK O VAL B 424 MG MG B 704 1555 1555 2.75 LINK O ASN B 453 MG MG B 704 1555 1555 2.69 LINK SG CYS B 494 FE3 SF4 B 701 1555 1555 2.26 LINK SG CYS B 500 FE4 SF4 B 701 1555 1555 2.31 LINK SG CYS B 540 FE1 SF4 B 701 1555 1555 2.40 LINK SG CYS B 544 FE2 SF4 B 701 1555 1555 2.23 LINK SG CYS B 544 FE SRM B 702 1555 1555 2.50 LINK FE SRM B 702 O1 PO4 B 703 1555 1555 1.82 LINK MG MG B 704 O HOH B 832 1555 1555 2.69 LINK MG MG B 704 O HOH B 890 1555 1555 2.57 LINK SG CYS C 39 FE2 FES C 101 1555 1555 2.31 LINK SG CYS C 44 FE2 FES C 101 1555 1555 2.44 LINK SG CYS C 47 FE1 FES C 101 1555 1555 2.38 LINK SG CYS C 77 FE1 FES C 101 1555 1555 2.35 CISPEP 1 TYR A 79 PRO A 80 0 0.27 CISPEP 2 LEU A 497 PRO A 498 0 9.44 CISPEP 3 TYR B 79 PRO B 80 0 2.95 CISPEP 4 LEU B 497 PRO B 498 0 6.96 CISPEP 5 LEU C 95 THR C 96 0 16.46 SITE 1 AC1 10 CYS A 494 CYS A 500 ALA A 503 THR A 538 SITE 2 AC1 10 GLY A 539 CYS A 540 ASN A 542 GLY A 543 SITE 3 AC1 10 CYS A 544 SRM A 702 SITE 1 AC2 40 TYR A 106 GLN A 108 ARG A 124 ARG A 153 SITE 2 AC2 40 THR A 155 THR A 156 ARG A 157 THR A 159 SITE 3 AC2 40 GLN A 161 HIS A 163 ARG A 275 LYS A 276 SITE 4 AC2 40 LYS A 278 GLY A 318 MET A 319 GLY A 320 SITE 5 AC2 40 ARG A 368 GLN A 454 ALA A 493 CYS A 494 SITE 6 AC2 40 PRO A 495 CYS A 500 PRO A 501 LEU A 502 SITE 7 AC2 40 ASN A 542 GLY A 543 CYS A 544 ARG A 546 SITE 8 AC2 40 SF4 A 701 PO4 A 703 HOH A 816 HOH A 817 SITE 9 AC2 40 HOH A 849 HOH A 879 HOH A 889 HOH A 899 SITE 10 AC2 40 HOH A 904 HOH A 932 HOH A 969 HOH A 993 SITE 1 AC3 6 ARG A 124 ARG A 193 LYS A 276 LYS A 278 SITE 2 AC3 6 SRM A 702 HOH A 804 SITE 1 AC4 5 VAL A 424 ASN A 453 ASN A 455 HOH A 825 SITE 2 AC4 5 HOH A 884 SITE 1 AC5 11 CYS B 494 PRO B 495 CYS B 500 ALA B 503 SITE 2 AC5 11 THR B 538 GLY B 539 CYS B 540 ASN B 542 SITE 3 AC5 11 GLY B 543 CYS B 544 SRM B 702 SITE 1 AC6 40 TYR B 106 GLN B 108 ARG B 124 ARG B 153 SITE 2 AC6 40 THR B 155 THR B 156 ARG B 157 THR B 159 SITE 3 AC6 40 GLN B 161 HIS B 163 ARG B 275 LYS B 276 SITE 4 AC6 40 LYS B 278 GLY B 318 MET B 319 GLY B 320 SITE 5 AC6 40 ARG B 368 GLN B 454 ALA B 493 CYS B 494 SITE 6 AC6 40 PRO B 495 LEU B 499 CYS B 500 PRO B 501 SITE 7 AC6 40 LEU B 502 ASN B 542 GLY B 543 CYS B 544 SITE 8 AC6 40 ARG B 546 SF4 B 701 PO4 B 703 HOH B 805 SITE 9 AC6 40 HOH B 807 HOH B 811 HOH B 812 HOH B 836 SITE 10 AC6 40 HOH B 849 HOH B 895 HOH B 898 HOH B 909 SITE 1 AC7 5 ARG B 124 ARG B 193 LYS B 276 LYS B 278 SITE 2 AC7 5 SRM B 702 SITE 1 AC8 5 VAL B 424 ASN B 453 ASN B 455 HOH B 832 SITE 2 AC8 5 HOH B 890 SITE 1 AC9 9 SER C 38 CYS C 39 ARG C 40 GLY C 42 SITE 2 AC9 9 SER C 43 CYS C 44 CYS C 47 LEU C 75 SITE 3 AC9 9 CYS C 77 CRYST1 103.414 103.406 122.434 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009670 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008168 0.00000