HEADER TRANSPORT PROTEIN 28-DEC-15 5H9N TITLE CRYSTAL STRUCTURE OF LTBP1 Y114A MUTANT IN COMPLEX WITH LEUKOTRIENE C4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOCALIN AI-4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 18-173; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE FIRST TWO RESIDUES ARE DISORDERED IN THE CRYSTAL SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODNIUS PROLIXUS; SOURCE 3 ORGANISM_COMMON: TRIATOMID BUG; SOURCE 4 ORGANISM_TAXID: 13249; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS LIPOCALIN, RHODNIUS, SALIVARY, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.F.ANDERSEN REVDAT 3 24-MAY-17 5H9N 1 HETSYN REVDAT 2 27-JUL-16 5H9N 1 JRNL REVDAT 1 11-MAY-16 5H9N 0 JRNL AUTH W.JABLONKA,V.PHAM,G.NARDONE,A.GITTIS,L.SILVA-CARDOSO, JRNL AUTH 2 G.C.ATELLA,J.M.RIBEIRO,J.F.ANDERSEN JRNL TITL STRUCTURE AND LIGAND-BINDING MECHANISM OF A CYSTEINYL JRNL TITL 2 LEUKOTRIENE-BINDING PROTEIN FROM A BLOOD-FEEDING DISEASE JRNL TITL 3 VECTOR. JRNL REF ACS CHEM.BIOL. V. 11 1934 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 27124118 JRNL DOI 10.1021/ACSCHEMBIO.6B00032 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 33471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8244 - 2.9300 0.88 2530 114 0.1567 0.1969 REMARK 3 2 2.9300 - 2.3259 0.99 2748 169 0.1682 0.1772 REMARK 3 3 2.3259 - 2.0320 0.98 2751 151 0.1515 0.1926 REMARK 3 4 2.0320 - 1.8463 0.97 2747 129 0.1581 0.1624 REMARK 3 5 1.8463 - 1.7139 0.97 2706 127 0.1632 0.1930 REMARK 3 6 1.7139 - 1.6129 0.96 2701 145 0.1601 0.1788 REMARK 3 7 1.6129 - 1.5321 0.96 2681 147 0.1614 0.1774 REMARK 3 8 1.5321 - 1.4654 0.96 2682 129 0.1663 0.2072 REMARK 3 9 1.4654 - 1.4090 0.95 2646 132 0.1746 0.1891 REMARK 3 10 1.4090 - 1.3604 0.95 2631 143 0.1797 0.2070 REMARK 3 11 1.3604 - 1.3179 0.94 2607 141 0.1828 0.2061 REMARK 3 12 1.3179 - 1.2802 0.85 2378 136 0.1910 0.2139 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1249 REMARK 3 ANGLE : 1.148 1683 REMARK 3 CHIRALITY : 0.045 185 REMARK 3 PLANARITY : 0.004 223 REMARK 3 DIHEDRAL : 13.000 458 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9275 6.4338 -6.7838 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1374 REMARK 3 T33: 0.1080 T12: -0.0251 REMARK 3 T13: 0.0163 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.9176 L22: 0.9319 REMARK 3 L33: 2.5703 L12: -0.0700 REMARK 3 L13: -0.3216 L23: 0.2510 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: -0.1151 S13: -0.0537 REMARK 3 S21: 0.1668 S22: -0.0236 S23: 0.1107 REMARK 3 S31: 0.1943 S32: -0.4162 S33: 0.0555 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5302 9.4127 -16.5999 REMARK 3 T TENSOR REMARK 3 T11: 0.0822 T22: 0.1084 REMARK 3 T33: 0.0987 T12: -0.0075 REMARK 3 T13: -0.0189 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.2531 L22: 3.2305 REMARK 3 L33: 3.4056 L12: -1.8911 REMARK 3 L13: -1.8908 L23: 3.1365 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.1577 S13: 0.1681 REMARK 3 S21: 0.2177 S22: 0.2185 S23: -0.3197 REMARK 3 S31: 0.2188 S32: 0.3721 S33: -0.2898 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1344 -3.8274 -14.5645 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.0712 REMARK 3 T33: 0.1148 T12: -0.0208 REMARK 3 T13: 0.0364 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 6.0988 L22: 3.1568 REMARK 3 L33: 2.3725 L12: 3.3478 REMARK 3 L13: -1.8788 L23: -1.2614 REMARK 3 S TENSOR REMARK 3 S11: -0.1676 S12: -0.1012 S13: -0.2635 REMARK 3 S21: 0.0252 S22: -0.0237 S23: -0.0829 REMARK 3 S31: 0.3312 S32: -0.1521 S33: 0.1913 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4761 -1.9665 -5.6177 REMARK 3 T TENSOR REMARK 3 T11: 0.1378 T22: 0.0654 REMARK 3 T33: 0.0958 T12: 0.0029 REMARK 3 T13: 0.0002 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 3.6871 L22: 5.0571 REMARK 3 L33: 7.6402 L12: -1.2636 REMARK 3 L13: -3.6275 L23: 3.3204 REMARK 3 S TENSOR REMARK 3 S11: -0.2440 S12: 0.1216 S13: -0.2307 REMARK 3 S21: -0.0112 S22: -0.0311 S23: -0.1466 REMARK 3 S31: 0.5114 S32: -0.1261 S33: 0.3031 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9762 -4.4227 -6.4470 REMARK 3 T TENSOR REMARK 3 T11: 0.1824 T22: 0.0787 REMARK 3 T33: 0.1390 T12: 0.0139 REMARK 3 T13: 0.0237 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 8.1277 L22: 7.1265 REMARK 3 L33: 6.1057 L12: -7.1443 REMARK 3 L13: -5.8777 L23: 5.0914 REMARK 3 S TENSOR REMARK 3 S11: -0.2173 S12: -0.1067 S13: -0.2020 REMARK 3 S21: 0.0710 S22: 0.1172 S23: -0.1823 REMARK 3 S31: 0.5224 S32: 0.2571 S33: 0.0875 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6772 6.6450 -8.4684 REMARK 3 T TENSOR REMARK 3 T11: 0.0588 T22: 0.0606 REMARK 3 T33: 0.0542 T12: -0.0129 REMARK 3 T13: 0.0032 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.0938 L22: 1.2697 REMARK 3 L33: 3.3877 L12: -0.2308 REMARK 3 L13: 0.3090 L23: -0.2035 REMARK 3 S TENSOR REMARK 3 S11: -0.0731 S12: 0.0588 S13: -0.0132 REMARK 3 S21: 0.0612 S22: 0.0154 S23: 0.0296 REMARK 3 S31: 0.0870 S32: -0.2074 S33: 0.0510 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5937 8.0834 -6.2817 REMARK 3 T TENSOR REMARK 3 T11: 0.0723 T22: 0.1044 REMARK 3 T33: 0.0983 T12: 0.0093 REMARK 3 T13: -0.0177 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 3.7958 L22: 2.7118 REMARK 3 L33: 3.8789 L12: -0.1967 REMARK 3 L13: 0.9778 L23: -0.5507 REMARK 3 S TENSOR REMARK 3 S11: -0.0080 S12: -0.1459 S13: -0.1626 REMARK 3 S21: 0.2518 S22: 0.0616 S23: -0.2675 REMARK 3 S31: -0.0777 S32: 0.4860 S33: 0.0173 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2999 11.2098 -22.9123 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.1375 REMARK 3 T33: 0.0676 T12: 0.0237 REMARK 3 T13: -0.0190 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.6096 L22: 8.3014 REMARK 3 L33: 5.2924 L12: -1.4832 REMARK 3 L13: -1.2382 L23: 1.3472 REMARK 3 S TENSOR REMARK 3 S11: 0.0696 S12: 0.1940 S13: 0.0815 REMARK 3 S21: -0.4275 S22: 0.0878 S23: -0.1394 REMARK 3 S31: -0.2706 S32: -0.3671 S33: -0.1398 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 136 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1223 21.9274 -11.2824 REMARK 3 T TENSOR REMARK 3 T11: 0.1888 T22: 0.1361 REMARK 3 T33: 0.1314 T12: 0.0534 REMARK 3 T13: 0.0077 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 4.0464 L22: 6.4759 REMARK 3 L33: 5.2768 L12: 1.4008 REMARK 3 L13: 4.6136 L23: 1.1712 REMARK 3 S TENSOR REMARK 3 S11: -0.1108 S12: -0.3817 S13: 0.2556 REMARK 3 S21: 0.5721 S22: 0.0176 S23: 0.0336 REMARK 3 S31: -0.2325 S32: -0.2322 S33: 0.1368 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3669 16.3402 -16.3044 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.0792 REMARK 3 T33: 0.1109 T12: 0.0044 REMARK 3 T13: -0.0048 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.2186 L22: 2.7211 REMARK 3 L33: 5.3291 L12: -1.8837 REMARK 3 L13: -3.8914 L23: 1.8274 REMARK 3 S TENSOR REMARK 3 S11: 0.1968 S12: -0.0876 S13: 0.2271 REMARK 3 S21: -0.1002 S22: 0.2026 S23: -0.3558 REMARK 3 S31: -0.7237 S32: 0.1651 S33: -0.3238 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5H9N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216707. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.16400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8, 30 % PEG 6000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.04550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 473 O HOH A 527 2.19 REMARK 500 O HOH A 409 O HOH A 413 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 95 CG - SD - CE ANGL. DEV. = -10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 102 -40.72 69.22 REMARK 500 ASN A 104 -54.64 -133.07 REMARK 500 ALA A 114 50.30 -150.08 REMARK 500 GLU A 133 -144.76 -126.01 REMARK 500 LEU A 147 55.55 -112.68 REMARK 500 LEU A 153 -145.81 -96.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LTX A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5H9L RELATED DB: PDB REMARK 900 RELATED ID: 5HA0 RELATED DB: PDB REMARK 900 RELATED ID: 5HAE RELATED DB: PDB DBREF 5H9N A 1 156 UNP Q7YT09 Q7YT09_RHOPR 18 173 SEQADV 5H9N ALA A 114 UNP Q7YT09 TYR 131 ENGINEERED MUTATION SEQRES 1 A 156 ALA GLU VAL THR SER ILE PRO THR GLY CYS ASN ALA LEU SEQRES 2 A 156 SER GLY LYS ILE MET SER GLY PHE ASP ALA ASN ARG PHE SEQRES 3 A 156 PHE THR GLY ASP TRP TYR LEU THR HIS SER ARG ASP SER SEQRES 4 A 156 GLU VAL PRO VAL ARG CYS GLU LYS TYR GLN THR GLY SER SEQRES 5 A 156 ASN LEU GLN LEU ASN PHE ASN GLY LYS ASN GLY ASP VAL SEQRES 6 A 156 LYS CYS SER GLY SER THR VAL SER GLY ASN GLN GLY PHE SEQRES 7 A 156 TYR SER PHE GLN CYS THR THR THR SER GLY GLY SER PHE SEQRES 8 A 156 THR SER TYR MET ALA VAL VAL GLU THR ASP TYR ALA ASN SEQRES 9 A 156 TYR ALA LEU LEU TYR ARG CYS GLY LEU ALA GLY SER THR SEQRES 10 A 156 THR PRO LYS ASP ASN PHE LEU LEU PHE ASN ARG GLN SER SEQRES 11 A 156 SER GLY GLU ILE PRO ALA GLY LEU SER THR LYS LEU ASN SEQRES 12 A 156 GLN LEU GLU LEU THR SER LEU ASN LYS LEU GLY CYS SER HET LTX A 201 43 HETNAM LTX (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2- HETNAM 2 LTX [[(4~{S})-4-AZANYL-5-OXIDANYL-5-OXIDANYLIDENE- HETNAM 3 LTX PENTANOYL]AMINO]-3-(2-HYDROXY-2-OXOETHYLAMINO)-3- HETNAM 4 LTX OXIDANYLIDENE-PROPYL]SULFANYL-5-OXIDANYL-ICOSA-7,9,11, HETNAM 5 LTX 14-TETRAENOIC ACID HETSYN LTX LEUKOTRIENE C4 FORMUL 2 LTX C30 H47 N3 O9 S FORMUL 3 HOH *241(H2 O) HELIX 1 AA1 ASP A 22 PHE A 27 1 6 HELIX 2 AA2 PRO A 135 GLY A 137 5 3 HELIX 3 AA3 LEU A 138 LEU A 145 1 8 SHEET 1 AA110 ASN A 151 LYS A 152 0 SHEET 2 AA110 ASP A 30 SER A 36 -1 N SER A 36 O ASN A 151 SHEET 3 AA110 LYS A 120 ASN A 127 -1 O ASN A 127 N TYR A 32 SHEET 4 AA110 TYR A 105 GLY A 112 -1 N ALA A 106 O PHE A 126 SHEET 5 AA110 SER A 90 THR A 100 -1 N GLU A 99 O LEU A 107 SHEET 6 AA110 PHE A 78 THR A 85 -1 N PHE A 81 O SER A 93 SHEET 7 AA110 GLY A 63 THR A 71 -1 N SER A 70 O SER A 80 SHEET 8 AA110 GLN A 55 GLY A 60 -1 N PHE A 58 O VAL A 65 SHEET 9 AA110 GLU A 46 GLY A 51 -1 N GLN A 49 O ASN A 57 SHEET 10 AA110 ASP A 30 SER A 36 -1 N TRP A 31 O TYR A 48 SSBOND 1 CYS A 10 CYS A 111 1555 1555 2.05 SSBOND 2 CYS A 45 CYS A 155 1555 1555 2.05 SSBOND 3 CYS A 67 CYS A 83 1555 1555 2.05 CISPEP 1 VAL A 41 PRO A 42 0 -4.11 SITE 1 AC1 21 ASN A 24 LEU A 56 PHE A 58 GLY A 60 SITE 2 AC1 21 LYS A 61 PHE A 91 SER A 93 MET A 95 SITE 3 AC1 21 ARG A 110 ALA A 114 GLY A 115 ASN A 122 SITE 4 AC1 21 HOH A 315 HOH A 341 HOH A 349 HOH A 369 SITE 5 AC1 21 HOH A 383 HOH A 397 HOH A 424 HOH A 436 SITE 6 AC1 21 HOH A 453 CRYST1 34.229 58.091 36.152 90.00 104.16 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029215 0.000000 0.007372 0.00000 SCALE2 0.000000 0.017214 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028528 0.00000