HEADER CELL ADHESION 30-DEC-15 5HA6 TITLE CRYSTAL STRUCTURE OF HUMAN SYNCYTIN-1 FUSION SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNCYTIN-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENDOGENOUS RETROVIRUS GROUP W MEMBER 1,ENV-W,ENVELOPE COMPND 5 POLYPROTEIN GPR73,ENVERIN,HERV-7Q ENVELOPE PROTEIN,HERV-W ENVELOPE COMPND 6 PROTEIN,HERV-W_7Q21.2 PROVIRUS ANCESTRAL ENV POLYPROTEIN,SYNCYTIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERVW-1, ERVWE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOPROTEIN, HUMAN, FUSION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR H.AYDIN,J.E.LEE REVDAT 4 27-SEP-23 5HA6 1 REMARK REVDAT 3 08-JAN-20 5HA6 1 REMARK REVDAT 2 01-NOV-17 5HA6 1 REMARK REVDAT 1 02-AUG-17 5HA6 0 JRNL AUTH H.AYDIN,A.THAVALINGAM,G.BIKOPOULOS,A.SULTANA,J.E.LEE JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE HUMAN JRNL TITL 2 SYNCYTIN 1 FUSION PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4305 - 3.1754 1.00 3015 154 0.2023 0.2275 REMARK 3 2 3.1754 - 2.5205 1.00 2853 150 0.2083 0.2480 REMARK 3 3 2.5205 - 2.2019 1.00 2833 133 0.1819 0.2303 REMARK 3 4 2.2019 - 2.0006 0.99 2765 139 0.1845 0.2336 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1334 REMARK 3 ANGLE : 1.266 1798 REMARK 3 CHIRALITY : 0.053 212 REMARK 3 PLANARITY : 0.006 238 REMARK 3 DIHEDRAL : 14.815 497 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2009 -12.8134 5.8834 REMARK 3 T TENSOR REMARK 3 T11: 0.1511 T22: 0.1434 REMARK 3 T33: 0.2135 T12: -0.0076 REMARK 3 T13: 0.0117 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.1373 L22: 0.9705 REMARK 3 L33: 5.3874 L12: -0.0745 REMARK 3 L13: -0.0513 L23: 0.8012 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: -0.0893 S13: -0.0475 REMARK 3 S21: 0.1000 S22: -0.0482 S23: 0.0364 REMARK 3 S31: 0.0460 S32: -0.3136 S33: 0.1499 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 396 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8816 -24.8589 -12.9100 REMARK 3 T TENSOR REMARK 3 T11: 0.2837 T22: 0.2406 REMARK 3 T33: 0.2758 T12: -0.0125 REMARK 3 T13: -0.0146 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.7286 L22: 1.8642 REMARK 3 L33: 3.1090 L12: -1.0680 REMARK 3 L13: -2.7153 L23: 1.8294 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.1835 S13: -0.3563 REMARK 3 S21: -0.2269 S22: -0.0579 S23: -0.0382 REMARK 3 S31: 0.5030 S32: -0.2867 S33: 0.2124 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 411 THROUGH 434 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9457 -16.3421 21.1999 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.2912 REMARK 3 T33: 0.2574 T12: -0.0092 REMARK 3 T13: 0.0271 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.5406 L22: 4.5866 REMARK 3 L33: 8.0011 L12: -0.5959 REMARK 3 L13: -0.4486 L23: 3.2452 REMARK 3 S TENSOR REMARK 3 S11: -0.1648 S12: -0.2957 S13: 0.0019 REMARK 3 S21: 0.4459 S22: -0.1305 S23: 0.2147 REMARK 3 S31: 0.2608 S32: -0.7839 S33: 0.4040 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2463 0.8126 51.6148 REMARK 3 T TENSOR REMARK 3 T11: 0.6300 T22: 0.6431 REMARK 3 T33: 0.3060 T12: 0.0888 REMARK 3 T13: -0.0601 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.7645 L22: 1.9912 REMARK 3 L33: 0.4421 L12: 0.4300 REMARK 3 L13: -0.1683 L23: -0.6574 REMARK 3 S TENSOR REMARK 3 S11: -0.3178 S12: -0.3623 S13: 0.1980 REMARK 3 S21: 0.4208 S22: 0.0444 S23: -0.1690 REMARK 3 S31: -0.4686 S32: 0.4265 S33: -0.0811 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 389 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6089 -9.1551 70.9838 REMARK 3 T TENSOR REMARK 3 T11: 0.9721 T22: 0.6230 REMARK 3 T33: 0.5400 T12: 0.1043 REMARK 3 T13: -0.0507 T23: 0.1181 REMARK 3 L TENSOR REMARK 3 L11: 6.6981 L22: 3.7146 REMARK 3 L33: 6.6795 L12: 2.2868 REMARK 3 L13: 2.7731 L23: -3.0802 REMARK 3 S TENSOR REMARK 3 S11: -0.8670 S12: -0.0795 S13: -0.0622 REMARK 3 S21: -0.2969 S22: 0.1980 S23: 0.4157 REMARK 3 S31: 3.6263 S32: 0.3064 S33: 0.5916 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 411 THROUGH 434 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0164 -4.9321 41.6041 REMARK 3 T TENSOR REMARK 3 T11: 0.5214 T22: 0.5447 REMARK 3 T33: 0.3335 T12: 0.1319 REMARK 3 T13: 0.0024 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 3.4088 L22: 6.4103 REMARK 3 L33: 5.2601 L12: 2.9621 REMARK 3 L13: -0.7884 L23: -1.9737 REMARK 3 S TENSOR REMARK 3 S11: -0.6851 S12: -0.5252 S13: -0.3566 REMARK 3 S21: 0.1520 S22: 0.1569 S23: -0.7932 REMARK 3 S31: 0.1451 S32: -0.2174 S33: 0.5667 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216733. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.84592 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12052 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 42.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4JF3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 22.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% (W/V) PEG 3350, 0.1 M SODIUM REMARK 280 ACETATE-HCL, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 24.05900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 13.89047 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 126.30367 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 24.05900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 13.89047 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 126.30367 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 24.05900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 13.89047 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 126.30367 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 24.05900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 13.89047 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 126.30367 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 24.05900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 13.89047 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 126.30367 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 24.05900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 13.89047 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 126.30367 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 27.78094 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 252.60733 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 27.78094 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 252.60733 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 27.78094 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 252.60733 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 27.78094 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 252.60733 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 27.78094 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 252.60733 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 27.78094 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 252.60733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TRIMER DETERMINED BY SIZE EXCLUSION CHROMATOGRAPHY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 24.05900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -41.67141 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 48.11800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 501 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B 501 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 638 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 666 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 ALA A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 VAL A -15 REMARK 465 ASP A -14 REMARK 465 ASP A -13 REMARK 465 ASP A -12 REMARK 465 ASP A -11 REMARK 465 LYS A -10 REMARK 465 MET A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 THR A 435 REMARK 465 MET B -23 REMARK 465 ALA B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 VAL B -15 REMARK 465 ASP B -14 REMARK 465 ASP B -13 REMARK 465 ASP B -12 REMARK 465 ASP B -11 REMARK 465 LYS B -10 REMARK 465 MET B -9 REMARK 465 LEU B -8 REMARK 465 VAL B -7 REMARK 465 PRO B -6 REMARK 465 ARG B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 391 REMARK 465 GLU B 392 REMARK 465 ARG B 393 REMARK 465 GLY B 394 REMARK 465 GLY B 395 REMARK 465 THR B 396 REMARK 465 CYS B 397 REMARK 465 LEU B 398 REMARK 465 PHE B 399 REMARK 465 LEU B 400 REMARK 465 GLY B 401 REMARK 465 GLU B 402 REMARK 465 GLU B 403 REMARK 465 CYS B 404 REMARK 465 THR B 435 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 345 CG CD OE1 NE2 REMARK 470 LYS A 349 CG CD CE NZ REMARK 470 GLU A 392 CG CD OE1 OE2 REMARK 470 GLU A 403 CG CD OE1 OE2 REMARK 470 GLU B 359 CG CD OE1 OE2 REMARK 470 LEU B 380 CG CD1 CD2 REMARK 470 ASP B 387 CG OD1 OD2 REMARK 470 LEU B 388 CG CD1 CD2 REMARK 470 THR B 390 OG1 CG2 REMARK 470 SER B 405 OG REMARK 470 TYR B 406 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B 408 CG1 CG2 REMARK 470 GLU B 416 CG CD OE1 OE2 REMARK 470 LYS B 419 CG CD CE NZ REMARK 470 ARG B 422 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 426 CG CD OE1 NE2 REMARK 470 GLU B 430 CG CD OE1 OE2 REMARK 470 LEU B 432 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 345 O HOH B 601 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 410 31.77 -148.48 REMARK 500 ARG B 433 1.37 -65.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 501 DBREF 5HA6 A 343 435 UNP Q9UQF0 SYCY1_HUMAN 343 435 DBREF 5HA6 B 343 435 UNP Q9UQF0 SYCY1_HUMAN 343 435 SEQADV 5HA6 MET A -23 UNP Q9UQF0 INITIATING METHIONINE SEQADV 5HA6 ALA A -22 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -21 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -20 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -19 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -18 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -17 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS A -16 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 VAL A -15 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP A -14 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP A -13 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP A -12 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP A -11 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 LYS A -10 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 MET A -9 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 LEU A -8 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 VAL A -7 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 PRO A -6 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ARG A -5 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY A -4 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER A -3 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER A -2 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY A -1 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY A 0 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER A 405 UNP Q9UQF0 CYS 405 ENGINEERED MUTATION SEQADV 5HA6 MET B -23 UNP Q9UQF0 INITIATING METHIONINE SEQADV 5HA6 ALA B -22 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -21 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -20 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -19 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -18 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -17 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 HIS B -16 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 VAL B -15 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP B -14 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP B -13 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP B -12 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ASP B -11 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 LYS B -10 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 MET B -9 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 LEU B -8 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 VAL B -7 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 PRO B -6 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 ARG B -5 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY B -4 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER B -3 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER B -2 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY B -1 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 GLY B 0 UNP Q9UQF0 EXPRESSION TAG SEQADV 5HA6 SER B 405 UNP Q9UQF0 CYS 405 ENGINEERED MUTATION SEQRES 1 A 117 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 117 LYS MET LEU VAL PRO ARG GLY SER SER GLY GLY SER THR SEQRES 3 A 117 GLN PHE TYR TYR LYS LEU SER GLN GLU LEU ASN GLY ASP SEQRES 4 A 117 MET GLU ARG VAL ALA ASP SER LEU VAL THR LEU GLN ASP SEQRES 5 A 117 GLN LEU ASN SER LEU ALA ALA VAL VAL LEU GLN ASN ARG SEQRES 6 A 117 ARG ALA LEU ASP LEU LEU THR ALA GLU ARG GLY GLY THR SEQRES 7 A 117 CYS LEU PHE LEU GLY GLU GLU CYS SER TYR TYR VAL ASN SEQRES 8 A 117 GLN SER GLY ILE VAL THR GLU LYS VAL LYS GLU ILE ARG SEQRES 9 A 117 ASP ARG ILE GLN ARG ARG ALA GLU GLU LEU ARG ASN THR SEQRES 1 B 117 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 B 117 LYS MET LEU VAL PRO ARG GLY SER SER GLY GLY SER THR SEQRES 3 B 117 GLN PHE TYR TYR LYS LEU SER GLN GLU LEU ASN GLY ASP SEQRES 4 B 117 MET GLU ARG VAL ALA ASP SER LEU VAL THR LEU GLN ASP SEQRES 5 B 117 GLN LEU ASN SER LEU ALA ALA VAL VAL LEU GLN ASN ARG SEQRES 6 B 117 ARG ALA LEU ASP LEU LEU THR ALA GLU ARG GLY GLY THR SEQRES 7 B 117 CYS LEU PHE LEU GLY GLU GLU CYS SER TYR TYR VAL ASN SEQRES 8 B 117 GLN SER GLY ILE VAL THR GLU LYS VAL LYS GLU ILE ARG SEQRES 9 B 117 ASP ARG ILE GLN ARG ARG ALA GLU GLU LEU ARG ASN THR HET CL A 501 1 HET CL B 501 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *73(H2 O) HELIX 1 AA1 GLY A 0 THR A 390 1 49 HELIX 2 AA2 ALA A 391 GLY A 394 5 4 HELIX 3 AA3 GLY A 395 GLY A 401 1 7 HELIX 4 AA4 GLN A 410 ASN A 434 1 25 HELIX 5 AA5 SER B 343 LEU B 389 1 47 HELIX 6 AA6 GLN B 410 ARG B 433 1 24 SSBOND 1 CYS A 397 CYS A 404 1555 1555 2.08 SITE 1 AC1 1 ASN A 382 SITE 1 AC2 1 ASN B 382 CRYST1 48.118 48.118 378.911 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020782 0.011999 0.000000 0.00000 SCALE2 0.000000 0.023997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002639 0.00000