HEADER HYDROLASE 04-JAN-16 5HCN TITLE GPN-LOOP GTPASE NPA3 IN COMPLEX WITH GMPPCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GPN-LOOP GTPASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 1-264 DELTA 203-211; COMPND 5 SYNONYM: ESSENTIAL PCL1-INTERACTING ATPASE 1,GPN-LOOP GTPASE NPA3, COMPND 6 NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 3; COMPND 7 EC: 3.6.5.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: NPA3, EPA1, GPN1, YJR072C, J1821; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GPN-LOOP GTPASE, CHAPERONE, ASSEMBLY, RNA POLYMERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.NIESSER,F.R.WAGNER,D.KOSTREWA,W.MUEHLBACHER,P.CRAMER REVDAT 5 06-SEP-17 5HCN 1 REMARK REVDAT 4 24-FEB-16 5HCN 1 JRNL REVDAT 3 27-JAN-16 5HCN 1 REMARK REVDAT 2 20-JAN-16 5HCN 1 REVDAT 1 13-JAN-16 5HCN 0 JRNL AUTH J.NIESSER,F.R.WAGNER,D.KOSTREWA,W.MUHLBACHER,P.CRAMER JRNL TITL STRUCTURE OF GPN-LOOP GTPASE NPA3 AND IMPLICATIONS FOR RNA JRNL TITL 2 POLYMERASE II ASSEMBLY. JRNL REF MOL.CELL.BIOL. V. 36 820 2015 JRNL REFN ESSN 1098-5549 JRNL PMID 26711263 JRNL DOI 10.1128/MCB.01009-15 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7634 - 3.1727 1.00 6820 139 0.1830 0.1833 REMARK 3 2 3.1727 - 2.5184 1.00 6544 133 0.2910 0.3387 REMARK 3 3 2.5184 - 2.2001 0.99 6405 131 0.3293 0.4125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 121.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2104 REMARK 3 ANGLE : 1.145 2836 REMARK 3 CHIRALITY : 0.042 315 REMARK 3 PLANARITY : 0.005 350 REMARK 3 DIHEDRAL : 16.107 775 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A OR CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 34.9295 18.3738 9.9674 REMARK 3 T TENSOR REMARK 3 T11: 1.0421 T22: 1.0051 REMARK 3 T33: 1.0193 T12: -0.0097 REMARK 3 T13: 0.0312 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 0.9514 L22: 2.2900 REMARK 3 L33: 0.8155 L12: -0.5717 REMARK 3 L13: 0.1690 L23: -1.3507 REMARK 3 S TENSOR REMARK 3 S11: -0.1710 S12: -0.0600 S13: -0.2462 REMARK 3 S21: 0.0813 S22: 0.2583 S23: 0.2106 REMARK 3 S31: -0.1018 S32: -0.0862 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HCN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99888 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20172 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 14.11 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 28.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.12 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.55000 REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM HEPES (PH 7.5), 200 MM SODIUM REMARK 280 CHLORIDE, 5 MM MAGNESIUM CHLORIDE, 10 MM DTT, SMALL TUBES, REMARK 280 TEMPERATURE 281.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.38000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 58.12000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.19000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.12000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.57000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.12000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.19000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.12000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.57000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 28.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 64 REMARK 465 GLU A 65 REMARK 465 ASN A 66 REMARK 465 TYR A 67 REMARK 465 GLN A 68 REMARK 465 LEU A 69 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 47 O2 GOL A 304 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 213 OH TYR A 213 7555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 44 -72.82 -78.14 REMARK 500 PRO A 47 -70.11 -26.99 REMARK 500 GLN A 110 95.02 -51.61 REMARK 500 ASP A 200 49.15 -77.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 17 OG1 REMARK 620 2 GCP A 302 O2G 164.5 REMARK 620 3 GCP A 302 O2B 101.6 92.6 REMARK 620 4 HOH A 401 O 92.7 71.8 153.5 REMARK 620 5 HOH A 402 O 89.3 87.9 77.1 80.9 REMARK 620 6 HOH A 404 O 91.9 87.5 115.2 86.2 167.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DAO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GCP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 DBREF 5HCN A 2 264 UNP P47122 GPN1_YEAST 2 264 SEQADV 5HCN A UNP P47122 LEU 203 DELETION SEQADV 5HCN A UNP P47122 ASN 204 DELETION SEQADV 5HCN A UNP P47122 GLY 205 DELETION SEQADV 5HCN A UNP P47122 ASP 206 DELETION SEQADV 5HCN A UNP P47122 ASN 207 DELETION SEQADV 5HCN A UNP P47122 GLY 208 DELETION SEQADV 5HCN A UNP P47122 LEU 209 DELETION SEQADV 5HCN A UNP P47122 GLY 210 DELETION SEQADV 5HCN A UNP P47122 SER 211 DELETION SEQADV 5HCN LYS A 265 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 266 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 267 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 268 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 269 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 270 UNP P47122 EXPRESSION TAG SEQADV 5HCN HIS A 271 UNP P47122 EXPRESSION TAG SEQRES 1 A 261 SER LEU SER THR ILE ILE CYS ILE GLY MET ALA GLY SER SEQRES 2 A 261 GLY LYS THR THR PHE MET GLN ARG LEU ASN SER HIS LEU SEQRES 3 A 261 ARG ALA GLU LYS THR PRO PRO TYR VAL ILE ASN LEU ASP SEQRES 4 A 261 PRO ALA VAL LEU ARG VAL PRO TYR GLY ALA ASN ILE ASP SEQRES 5 A 261 ILE ARG ASP SER ILE LYS TYR LYS LYS VAL MET GLU ASN SEQRES 6 A 261 TYR GLN LEU GLY PRO ASN GLY ALA ILE VAL THR SER LEU SEQRES 7 A 261 ASN LEU PHE SER THR LYS ILE ASP GLN VAL ILE ARG LEU SEQRES 8 A 261 VAL GLU GLN LYS LYS ASP LYS PHE GLN ASN CYS ILE ILE SEQRES 9 A 261 ASP THR PRO GLY GLN ILE GLU CYS PHE VAL TRP SER ALA SEQRES 10 A 261 SER GLY ALA ILE ILE THR GLU SER PHE ALA SER SER PHE SEQRES 11 A 261 PRO THR VAL ILE ALA TYR ILE VAL ASP THR PRO ARG ASN SEQRES 12 A 261 SER SER PRO THR THR PHE MET SER ASN MET LEU TYR ALA SEQRES 13 A 261 CYS SER ILE LEU TYR LYS THR LYS LEU PRO MET ILE VAL SEQRES 14 A 261 VAL PHE ASN LYS THR ASP VAL CYS LYS ALA ASP PHE ALA SEQRES 15 A 261 LYS GLU TRP MET THR ASP PHE GLU SER PHE GLN ALA ALA SEQRES 16 A 261 ILE LYS GLU ASP GLN ASP GLY TYR MET SER SER LEU VAL SEQRES 17 A 261 ASN SER MET SER LEU MET LEU GLU GLU PHE TYR SER GLN SEQRES 18 A 261 LEU ASP VAL VAL GLY VAL SER SER PHE THR GLY ASP GLY SEQRES 19 A 261 PHE ASP GLU PHE MET GLN CYS VAL ASP LYS LYS VAL ASP SEQRES 20 A 261 GLU TYR ASP GLN TYR TYR LYS LYS HIS HIS HIS HIS HIS SEQRES 21 A 261 HIS HET DAO A 301 14 HET GCP A 302 32 HET MG A 303 1 HET GOL A 304 6 HET GOL A 305 6 HETNAM DAO LAURIC ACID HETNAM GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 DAO C12 H24 O2 FORMUL 3 GCP C11 H18 N5 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *5(H2 O) HELIX 1 AA1 GLY A 15 GLU A 30 1 16 HELIX 2 AA2 ASN A 72 LYS A 85 1 14 HELIX 3 AA3 LYS A 85 LYS A 96 1 12 HELIX 4 AA4 ILE A 111 TRP A 116 1 6 HELIX 5 AA5 SER A 117 SER A 129 1 13 HELIX 6 AA6 ASP A 140 ASN A 144 5 5 HELIX 7 AA7 SER A 146 LYS A 165 1 20 HELIX 8 AA8 LYS A 174 CYS A 178 5 5 HELIX 9 AA9 ASP A 181 LYS A 198 1 18 HELIX 10 AB1 SER A 215 GLN A 231 1 17 HELIX 11 AB2 GLY A 244 TYR A 263 1 20 HELIX 12 AB3 LYS A 264 HIS A 267 5 4 SHEET 1 AA1 7 ILE A 52 ASP A 53 0 SHEET 2 AA1 7 TYR A 35 ASN A 38 1 N VAL A 36 O ILE A 52 SHEET 3 AA1 7 ASN A 102 ASP A 106 1 O ILE A 104 N TYR A 35 SHEET 4 AA1 7 SER A 4 ILE A 9 1 N CYS A 8 O ILE A 105 SHEET 5 AA1 7 THR A 133 VAL A 139 1 O ALA A 136 N ILE A 7 SHEET 6 AA1 7 MET A 168 PHE A 172 1 O VAL A 171 N VAL A 139 SHEET 7 AA1 7 LEU A 232 GLY A 236 1 O ASP A 233 N VAL A 170 LINK OG1 THR A 17 MG MG A 303 1555 1555 2.10 LINK O2G GCP A 302 MG MG A 303 1555 1555 2.08 LINK O2B GCP A 302 MG MG A 303 1555 1555 2.06 LINK MG MG A 303 O HOH A 401 1555 1555 2.05 LINK MG MG A 303 O HOH A 402 1555 1555 2.11 LINK MG MG A 303 O HOH A 404 1555 1555 2.09 CISPEP 1 TYR A 60 LYS A 61 0 6.96 SITE 1 AC1 5 ASN A 144 MET A 154 CYS A 158 TRP A 186 SITE 2 AC1 5 LEU A 232 SITE 1 AC2 18 ALA A 12 GLY A 13 SER A 14 GLY A 15 SITE 2 AC2 18 LYS A 16 THR A 17 THR A 18 GLY A 109 SITE 3 AC2 18 ASN A 173 LYS A 174 ASP A 176 SER A 238 SITE 4 AC2 18 SER A 239 PHE A 240 MG A 303 HOH A 401 SITE 5 AC2 18 HOH A 402 HOH A 404 SITE 1 AC3 5 THR A 17 GCP A 302 HOH A 401 HOH A 402 SITE 2 AC3 5 HOH A 404 SITE 1 AC4 4 GLN A 21 ARG A 45 PRO A 47 VAL A 177 SITE 1 AC5 6 LYS A 179 PHE A 182 TRP A 186 ASP A 189 SITE 2 AC5 6 SER A 216 LEU A 217 CRYST1 116.240 116.240 56.760 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008603 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017618 0.00000