HEADER SIGNALING PROTEIN 04-JAN-16 5HD5 TITLE FEMTOSECOND STRUCTURAL DYNAMICS DRIVES THE TRANS/CIS ISOMERIZATION IN TITLE 2 PHOTOACTIVE YELLOW PROTEIN: 200 NS TIME DELAY PHOTO-ACTIVATED (LIGHT) TITLE 3 STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOACTIVE YELLOW PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORHODOSPIRA HALOPHILA; SOURCE 3 ORGANISM_TAXID: 1053; SOURCE 4 GENE: PYP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOTORECEPTOR CIS TRANS ISOMERIZATION FREE ELECTRON LASER, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.PANDE,J.TENBOER,M.SCHMIDT REVDAT 6 15-NOV-23 5HD5 1 LINK REVDAT 5 16-AUG-23 5HD5 1 REMARK REVDAT 4 27-NOV-19 5HD5 1 REMARK REVDAT 3 14-FEB-18 5HD5 1 REMARK REVDAT 2 13-SEP-17 5HD5 1 REMARK REVDAT 1 25-MAY-16 5HD5 0 JRNL AUTH K.PANDE,C.D.HUTCHISON,G.GROENHOF,A.AQUILA,J.S.ROBINSON, JRNL AUTH 2 J.TENBOER,S.BASU,S.BOUTET,D.P.DEPONTE,M.LIANG,T.A.WHITE, JRNL AUTH 3 N.A.ZATSEPIN,O.YEFANOV,D.MOROZOV,D.OBERTHUER,C.GATI, JRNL AUTH 4 G.SUBRAMANIAN,D.JAMES,Y.ZHAO,J.KORALEK,J.BRAYSHAW,C.KUPITZ, JRNL AUTH 5 C.CONRAD,S.ROY-CHOWDHURY,J.D.COE,M.METZ,P.L.XAVIER, JRNL AUTH 6 T.D.GRANT,J.E.KOGLIN,G.KETAWALA,R.FROMME,V.SRAJER,R.HENNING, JRNL AUTH 7 J.C.SPENCE,A.OURMAZD,P.SCHWANDER,U.WEIERSTALL,M.FRANK, JRNL AUTH 8 P.FROMME,A.BARTY,H.N.CHAPMAN,K.MOFFAT,J.J.VAN THOR,M.SCHMIDT JRNL TITL FEMTOSECOND STRUCTURAL DYNAMICS DRIVES THE TRANS/CIS JRNL TITL 2 ISOMERIZATION IN PHOTOACTIVE YELLOW PROTEIN. JRNL REF SCIENCE V. 352 725 2016 JRNL REFN ESSN 1095-9203 JRNL PMID 27151871 JRNL DOI 10.1126/SCIENCE.AAD5081 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 13066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.293 REMARK 3 R VALUE (WORKING SET) : 0.289 REMARK 3 FREE R VALUE : 0.374 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 924 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.4690 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.5730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 987 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.185 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.059 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.870 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1180 ; 0.019 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1057 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1595 ; 2.069 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2441 ; 1.017 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 147 ; 6.733 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 59 ;38.900 ;25.593 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 189 ;17.053 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 6.439 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 161 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1402 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 287 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 582 ; 0.949 ; 0.704 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 581 ; 0.948 ; 0.704 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 731 ; 1.658 ; 1.049 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 732 ; 1.657 ; 1.049 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 598 ; 1.358 ; 0.818 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 599 ; 1.357 ; 0.818 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 865 ; 2.168 ; 1.172 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1192 ; 5.950 ; 6.507 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1173 ; 5.799 ; 6.196 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 6.95-7.05 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : CXI REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.31 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : CS-PAD CXI-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13066 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 19.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2287. REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICROCRYSTALIZATION USING COMBINATION REMARK 280 FREE INTERFACE DIFFUSION AND SPIN CENTRIFUGATION., PH 7, LIQUID REMARK 280 DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.40000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.40000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.40000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 224 O HOH A 251 1.96 REMARK 500 OG1 THR A 101 O HOH A 201 2.14 REMARK 500 O HOH A 202 O HOH A 250 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 54 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 75 -74.00 -131.95 REMARK 500 ASN A 89 96.04 -161.56 REMARK 500 ASP A 97 21.23 -150.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PHY RELATED DB: PDB REMARK 900 PDB ENTRY 2PHY IS THE SAME PROTEIN. REMARK 900 RELATED ID: 5HD3 RELATED DB: PDB REMARK 900 RELATED ID: 5HDC RELATED DB: PDB REMARK 900 RELATED ID: 5HDD RELATED DB: PDB REMARK 900 RELATED ID: 5HDS RELATED DB: PDB DBREF 5HD5 A 1 125 UNP P16113 PYP_HALHA 1 125 SEQADV 5HD5 60F A 69 UNP P16113 CYS 69 CONFLICT SEQRES 1 A 125 MET GLU HIS VAL ALA PHE GLY SER GLU ASP ILE GLU ASN SEQRES 2 A 125 THR LEU ALA LYS MET ASP ASP GLY GLN LEU ASP GLY LEU SEQRES 3 A 125 ALA PHE GLY ALA ILE GLN LEU ASP GLY ASP GLY ASN ILE SEQRES 4 A 125 LEU GLN TYR ASN ALA ALA GLU GLY ASP ILE THR GLY ARG SEQRES 5 A 125 ASP PRO LYS GLN VAL ILE GLY LYS ASN PHE PHE LYS ASP SEQRES 6 A 125 VAL ALA PRO 60F THR ASP SER PRO GLU PHE TYR GLY LYS SEQRES 7 A 125 PHE LYS GLU GLY VAL ALA SER GLY ASN LEU ASN THR MET SEQRES 8 A 125 PHE GLU TYR THR PHE ASP TYR GLN MET THR PRO THR LYS SEQRES 9 A 125 VAL LYS VAL HIS MET LYS LYS ALA LEU SER GLY ASP SER SEQRES 10 A 125 TYR TRP VAL PHE VAL LYS ARG VAL HET 60F A 69 34 HETNAM 60F (2~{R})-2-AZANYL-3-[(~{E})-3-(4-HYDROXYPHENYL)PROP-2- HETNAM 2 60F ENOYL]SULFANYL-PROPANOIC ACID FORMUL 1 60F C12 H13 N O4 S FORMUL 2 HOH *92(H2 O) HELIX 1 AA1 ASP A 10 ALA A 16 1 7 HELIX 2 AA2 ASP A 19 ASP A 24 1 6 HELIX 3 AA3 ASN A 43 GLY A 51 1 9 HELIX 4 AA4 ASP A 53 ILE A 58 1 6 HELIX 5 AA5 ALA A 67 ASP A 71 5 5 HELIX 6 AA6 PHE A 75 GLY A 86 1 12 SHEET 1 AA1 5 ILE A 39 TYR A 42 0 SHEET 2 AA1 5 GLY A 29 ASP A 34 -1 N GLN A 32 O LEU A 40 SHEET 3 AA1 5 SER A 117 ARG A 124 -1 O TYR A 118 N LEU A 33 SHEET 4 AA1 5 THR A 103 LYS A 111 -1 N LYS A 110 O TRP A 119 SHEET 5 AA1 5 ASN A 89 PHE A 96 -1 N PHE A 92 O VAL A 107 LINK C APRO A 68 N A60F A 69 1555 1555 1.34 LINK C BPRO A 68 N B60F A 69 1555 1555 1.33 LINK C A60F A 69 N ATHR A 70 1555 1555 1.33 LINK C B60F A 69 N BTHR A 70 1555 1555 1.34 CRYST1 66.900 66.900 40.800 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014948 0.008630 0.000000 0.00000 SCALE2 0.000000 0.017260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024510 0.00000 HETATM 622 C1 A60F A 69 12.245 2.382 -19.348 0.50 2.00 C HETATM 623 C1 B60F A 69 12.402 2.948 -19.189 0.50 6.70 C HETATM 624 C2 A60F A 69 12.534 1.242 -20.273 0.50 2.00 C HETATM 625 C2 B60F A 69 12.925 2.790 -17.818 0.50 6.59 C HETATM 626 C3 A60F A 69 13.438 0.243 -20.160 0.50 2.00 C HETATM 627 C3 B60F A 69 13.898 1.947 -17.395 0.50 6.64 C HETATM 628 O1 A60F A 69 13.024 2.627 -18.411 0.50 2.00 O HETATM 629 O1 B60F A 69 12.943 2.343 -20.096 0.50 7.32 O HETATM 630 C1'A60F A 69 14.570 -0.108 -19.252 0.50 2.00 C HETATM 631 C1'B60F A 69 14.763 0.987 -18.124 0.50 6.46 C HETATM 632 C6'A60F A 69 14.811 0.408 -17.974 0.50 2.00 C HETATM 633 C6'B60F A 69 14.601 0.737 -19.484 0.50 6.52 C HETATM 634 C5'A60F A 69 15.965 -0.040 -17.311 0.50 2.00 C HETATM 635 C5'B60F A 69 15.435 -0.149 -20.138 0.50 6.61 C HETATM 636 C4'A60F A 69 16.864 -0.952 -17.871 0.50 2.00 C HETATM 637 C4'B60F A 69 16.457 -0.773 -19.450 0.50 6.56 C HETATM 638 O4'A60F A 69 17.985 -1.399 -17.168 0.50 2.00 O HETATM 639 O4'B60F A 69 17.262 -1.621 -20.087 0.50 7.29 O HETATM 640 C3'A60F A 69 16.597 -1.451 -19.127 0.50 2.00 C HETATM 641 C3'B60F A 69 16.653 -0.541 -18.104 0.50 6.36 C HETATM 642 C2'A60F A 69 15.465 -1.043 -19.789 0.50 2.00 C HETATM 643 C2'B60F A 69 15.802 0.354 -17.447 0.50 6.52 C HETATM 644 N A60F A 69 12.187 5.577 -20.679 0.50 2.56 N HETATM 645 N B60F A 69 12.375 6.034 -20.929 0.50 4.41 N HETATM 646 CA A60F A 69 11.220 5.829 -19.604 0.50 2.48 C HETATM 647 CA B60F A 69 11.230 6.380 -20.090 0.50 4.52 C HETATM 648 CB A60F A 69 10.956 4.568 -18.760 0.50 2.38 C HETATM 649 CB B60F A 69 10.301 5.186 -19.872 0.50 5.01 C HETATM 650 SG A60F A 69 10.803 3.052 -19.769 0.50 2.15 S HETATM 651 SG B60F A 69 10.860 3.828 -18.855 0.50 5.96 S HETATM 652 C A60F A 69 11.768 6.886 -18.692 0.50 2.67 C HETATM 653 C B60F A 69 11.691 6.980 -18.788 0.50 4.30 C HETATM 654 O A60F A 69 11.038 7.764 -18.222 0.50 2.58 O HETATM 655 O B60F A 69 10.884 7.538 -18.046 0.50 4.08 O TER 1153 VAL A 125 HETATM 1154 O HOH A 201 3.936 -9.461 -20.115 1.00 43.44 O HETATM 1155 O HOH A 202 5.232 0.116 -23.404 1.00 7.27 O HETATM 1156 O HOH A 203 20.254 -13.331 -12.202 1.00 32.12 O HETATM 1157 O HOH A 204 33.656 3.571 -11.771 1.00 53.64 O HETATM 1158 O HOH A 205 27.210 -7.075 -17.982 1.00 28.53 O HETATM 1159 O HOH A 206 8.113 4.064 -22.420 1.00 11.43 O HETATM 1160 O HOH A 207 27.636 -13.604 -14.285 1.00 41.59 O HETATM 1161 O HOH A 208 3.698 2.763 -17.144 1.00 31.23 O HETATM 1162 O HOH A 209 15.130 9.760 -24.273 1.00 7.51 O HETATM 1163 O HOH A 210 25.366 -11.263 -21.568 1.00 31.33 O HETATM 1164 O HOH A 211 22.891 -10.346 -10.228 1.00 15.24 O HETATM 1165 O HOH A 212 33.491 0.007 -15.097 1.00 30.74 O HETATM 1166 O HOH A 213 18.627 -10.549 -19.955 1.00 14.94 O HETATM 1167 O HOH A 214 19.870 -1.549 -27.709 1.00 34.19 O HETATM 1168 O HOH A 215 25.088 -4.388 2.904 1.00 25.36 O HETATM 1169 O HOH A 216 16.092 -0.864 -24.561 1.00 12.56 O HETATM 1170 O HOH A 217 16.271 -9.465 -10.636 1.00 22.98 O HETATM 1171 O HOH A 218 19.738 -6.665 -25.035 1.00 21.28 O HETATM 1172 O HOH A 219 28.206 -3.576 -25.729 1.00 29.93 O HETATM 1173 O HOH A 220 26.968 5.793 -26.012 1.00 22.75 O HETATM 1174 O HOH A 221 11.952 -3.486 -29.602 1.00 25.22 O HETATM 1175 O HOH A 222 25.335 -11.043 -25.718 1.00 30.90 O HETATM 1176 O HOH A 223 23.513 4.435 0.526 1.00 8.84 O HETATM 1177 O HOH A 224 23.237 14.315 -19.581 1.00 19.95 O HETATM 1178 O HOH A 225 27.963 -7.538 -14.277 1.00 12.38 O HETATM 1179 O HOH A 226 16.481 -8.637 -7.865 1.00 32.33 O HETATM 1180 O HOH A 227 15.221 5.894 -27.587 1.00 17.64 O HETATM 1181 O HOH A 228 7.732 5.342 -16.717 1.00 19.86 O HETATM 1182 O HOH A 229 28.672 -5.291 -16.198 1.00 7.48 O HETATM 1183 O HOH A 230 35.868 -2.210 -1.103 1.00 15.09 O HETATM 1184 O HOH A 231 10.262 -5.033 -2.616 1.00 12.86 O HETATM 1185 O HOH A 232 7.756 9.526 -11.338 1.00 19.72 O HETATM 1186 O HOH A 233 12.054 6.468 -1.483 1.00 20.14 O HETATM 1187 O HOH A 234 20.637 -11.410 -17.184 1.00 31.39 O HETATM 1188 O HOH A 235 7.537 5.670 -20.073 1.00 46.07 O HETATM 1189 O HOH A 236 31.722 2.787 -5.972 1.00 5.92 O HETATM 1190 O HOH A 237 13.613 10.330 -4.592 1.00 29.96 O HETATM 1191 O HOH A 238 23.241 -8.915 -2.854 1.00 7.38 O HETATM 1192 O HOH A 239 7.495 -5.359 -9.431 1.00 12.85 O HETATM 1193 O HOH A 240 2.640 1.746 -19.856 1.00 20.61 O HETATM 1194 O HOH A 241 3.766 -5.652 -4.934 1.00 8.91 O HETATM 1195 O HOH A 242 21.125 0.383 -3.313 1.00 8.72 O HETATM 1196 O HOH A 243 2.004 -4.541 -15.241 1.00 26.65 O HETATM 1197 O HOH A 244 5.390 4.717 -11.336 1.00 33.87 O HETATM 1198 O HOH A 245 14.578 -11.016 -18.219 1.00 33.04 O HETATM 1199 O HOH A 246 26.551 -9.248 -16.722 1.00 27.85 O HETATM 1200 O HOH A 247 8.045 7.620 -17.782 1.00 32.46 O HETATM 1201 O HOH A 248 4.771 5.610 -21.109 1.00 23.87 O HETATM 1202 O HOH A 249 22.799 7.990 -29.184 1.00 36.36 O HETATM 1203 O HOH A 250 5.507 -2.028 -23.544 1.00 17.15 O HETATM 1204 O HOH A 251 24.844 14.294 -18.467 1.00 25.28 O HETATM 1205 O HOH A 252 27.381 -2.445 1.887 1.00 22.69 O HETATM 1206 O HOH A 253 4.297 -2.861 -6.733 1.00 38.54 O HETATM 1207 O HOH A 254 18.669 5.371 -29.692 1.00 27.31 O HETATM 1208 O HOH A 255 7.068 5.843 -13.161 1.00 20.93 O HETATM 1209 O HOH A 256 8.505 -7.851 -20.642 1.00 29.88 O HETATM 1210 O HOH A 257 14.002 -7.650 -7.613 1.00 19.10 O HETATM 1211 O HOH A 258 23.281 -3.432 5.241 1.00 18.56 O HETATM 1212 O HOH A 259 14.629 17.380 -11.972 1.00 17.20 O HETATM 1213 O HOH A 260 5.034 -4.435 -11.557 1.00 18.81 O HETATM 1214 O HOH A 261 18.485 7.788 -0.770 1.00 19.24 O HETATM 1215 O HOH A 262 27.188 11.839 -3.347 1.00 14.61 O HETATM 1216 O HOH A 263 14.487 -3.962 -26.011 1.00 29.22 O HETATM 1217 O HOH A 264 38.074 8.025 -5.421 1.00 26.03 O HETATM 1218 O HOH A 265 23.601 0.231 5.991 1.00 22.69 O HETATM 1219 O HOH A 266 25.008 7.027 -27.622 1.00 27.18 O HETATM 1220 O HOH A 267 5.088 -6.906 -14.060 1.00 35.58 O HETATM 1221 O HOH A 268 9.599 -7.773 -23.220 1.00 35.80 O HETATM 1222 O HOH A 269 24.515 7.297 2.698 1.00 28.89 O HETATM 1223 O HOH A 270 12.035 -9.402 -18.913 1.00 30.65 O HETATM 1224 O HOH A 271 34.522 0.686 -12.495 1.00 62.60 O HETATM 1225 O HOH A 272 21.986 6.022 1.967 1.00 29.74 O HETATM 1226 O HOH A 273 7.957 10.971 -14.300 1.00 36.21 O HETATM 1227 O HOH A 274 24.499 11.506 -0.310 1.00 43.24 O HETATM 1228 O HOH A 275 4.126 -0.734 -13.123 1.00 42.62 O HETATM 1229 O HOH A 276 7.533 13.534 -7.186 1.00 33.12 O HETATM 1230 O HOH A 277 24.172 3.853 -29.448 1.00 33.00 O HETATM 1231 O HOH A 278 13.665 -1.412 1.382 1.00 37.48 O HETATM 1232 O HOH A 279 31.035 16.045 -15.095 1.00 28.17 O HETATM 1233 O HOH A 280 16.068 0.020 1.152 1.00 27.77 O HETATM 1234 O HOH A 281 29.273 3.201 5.562 1.00 28.09 O HETATM 1235 O HOH A 282 7.859 -1.677 -28.775 1.00 37.15 O HETATM 1236 O HOH A 283 30.035 0.601 8.514 1.00 30.23 O HETATM 1237 O HOH A 284 2.714 -7.350 -15.121 1.00 37.00 O HETATM 1238 O HOH A 285 28.504 -14.248 -6.774 1.00 34.77 O HETATM 1239 O HOH A 286 33.761 2.136 -7.645 1.00 14.96 O HETATM 1240 O HOH A 287 26.779 -1.031 -28.431 1.00 43.21 O HETATM 1241 O HOH A 288 18.091 -1.955 -25.801 1.00 35.73 O HETATM 1242 O HOH A 289 13.323 14.433 -5.165 1.00 37.39 O HETATM 1243 O HOH A 290 1.942 -2.671 -21.984 1.00 27.40 O HETATM 1244 O HOH A 291 24.056 -12.285 -17.455 1.00 28.83 O HETATM 1245 O HOH A 292 1.697 1.105 -15.647 1.00 26.16 O CONECT 612 644 CONECT 613 645 CONECT 622 624 628 650 CONECT 623 625 629 651 CONECT 624 622 626 CONECT 625 623 627 CONECT 626 624 630 CONECT 627 625 631 CONECT 628 622 CONECT 629 623 CONECT 630 626 632 642 CONECT 631 627 633 643 CONECT 632 630 634 CONECT 633 631 635 CONECT 634 632 636 CONECT 635 633 637 CONECT 636 634 638 640 CONECT 637 635 639 641 CONECT 638 636 CONECT 639 637 CONECT 640 636 642 CONECT 641 637 643 CONECT 642 630 640 CONECT 643 631 641 CONECT 644 612 646 CONECT 645 613 647 CONECT 646 644 648 652 CONECT 647 645 649 653 CONECT 648 646 650 CONECT 649 647 651 CONECT 650 622 648 CONECT 651 623 649 CONECT 652 646 654 656 CONECT 653 647 655 657 CONECT 654 652 CONECT 655 653 CONECT 656 652 CONECT 657 653 MASTER 302 0 1 6 5 0 0 6 1079 1 38 10 END