HEADER LYASE 11-JAN-16 5HI8 TITLE STRUCTURE OF T-TYPE PHYCOBILIPROTEIN LYASE CPET FROM PROCHLOROCOCCUS TITLE 2 PHAGE P-HM1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTENNA PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CPET; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLOROCOCCUS PHAGE P-HM1; SOURCE 3 ORGANISM_TAXID: 445700; SOURCE 4 GENE: CPET, PHM1_028; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PASK-IBA45PLUS KEYWDS BETA BARREL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR R.GASPER,J.SCHWACH,N.FRANKENBERG-DINKEL,E.HOFMANN REVDAT 3 10-JAN-24 5HI8 1 SSBOND LINK REVDAT 2 22-MAR-17 5HI8 1 JRNL REVDAT 1 18-JAN-17 5HI8 0 JRNL AUTH R.GASPER,J.SCHWACH,J.HARTMANN,A.HOLTKAMP,J.WIETHAUS, JRNL AUTH 2 N.RIEDEL,E.HOFMANN,N.FRANKENBERG-DINKEL JRNL TITL DISTINCT FEATURES OF CYANOPHAGE-ENCODED T-TYPE JRNL TITL 2 PHYCOBILIPROTEIN LYASE PHI CPET: THE ROLE OF AUXILIARY JRNL TITL 3 METABOLIC GENES. JRNL REF J. BIOL. CHEM. V. 292 3089 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28073912 JRNL DOI 10.1074/JBC.M116.769703 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1-9-1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 60319 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9311 - 3.8771 0.99 5804 308 0.1664 0.1602 REMARK 3 2 3.8771 - 3.0776 0.99 5829 310 0.1941 0.2380 REMARK 3 3 3.0776 - 2.6887 0.99 5771 306 0.2337 0.2555 REMARK 3 4 2.6887 - 2.4429 0.98 5714 304 0.2295 0.2997 REMARK 3 5 2.4429 - 2.2678 0.98 5761 304 0.2315 0.2539 REMARK 3 6 2.2678 - 2.1341 0.98 5751 301 0.2273 0.2677 REMARK 3 7 2.1341 - 2.0272 0.98 5707 301 0.2542 0.2983 REMARK 3 8 2.0272 - 1.9389 0.97 5676 300 0.2619 0.2881 REMARK 3 9 1.9389 - 1.8643 0.96 5608 298 0.3238 0.3440 REMARK 3 10 1.8643 - 1.8000 0.96 5671 295 0.3744 0.3784 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2398 REMARK 3 ANGLE : 1.088 3255 REMARK 3 CHIRALITY : 0.046 308 REMARK 3 PLANARITY : 0.005 419 REMARK 3 DIHEDRAL : 14.713 842 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.2928 23.8618 30.1048 REMARK 3 T TENSOR REMARK 3 T11: 0.5224 T22: 0.7638 REMARK 3 T33: 0.4247 T12: -0.1563 REMARK 3 T13: -0.0265 T23: -0.1514 REMARK 3 L TENSOR REMARK 3 L11: 4.1534 L22: 4.1674 REMARK 3 L33: 1.6807 L12: -1.3175 REMARK 3 L13: 0.5149 L23: 0.4648 REMARK 3 S TENSOR REMARK 3 S11: 0.7058 S12: -1.1455 S13: 1.1358 REMARK 3 S21: 1.0953 S22: -0.1725 S23: -1.0307 REMARK 3 S31: -0.9364 S32: 1.2396 S33: -0.4716 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.9559 19.2891 9.3458 REMARK 3 T TENSOR REMARK 3 T11: 0.4493 T22: 0.4945 REMARK 3 T33: 0.3942 T12: 0.0207 REMARK 3 T13: 0.0252 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 6.9230 L22: 3.0697 REMARK 3 L33: 2.7020 L12: 1.1116 REMARK 3 L13: -2.2561 L23: 0.0176 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: 0.3882 S13: 0.0985 REMARK 3 S21: 0.1409 S22: 0.1497 S23: -0.2101 REMARK 3 S31: 0.1542 S32: 0.6172 S33: -0.4458 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.0896 19.2447 11.7073 REMARK 3 T TENSOR REMARK 3 T11: 0.3608 T22: 0.4028 REMARK 3 T33: 0.3732 T12: -0.0280 REMARK 3 T13: 0.0061 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 9.1993 L22: 7.8533 REMARK 3 L33: 7.2983 L12: -3.1612 REMARK 3 L13: -4.5732 L23: 2.8942 REMARK 3 S TENSOR REMARK 3 S11: 0.3070 S12: 0.3436 S13: 0.3698 REMARK 3 S21: -0.3967 S22: -0.1398 S23: -0.2461 REMARK 3 S31: -0.4065 S32: 0.0922 S33: -0.0989 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.3379 20.8036 13.3425 REMARK 3 T TENSOR REMARK 3 T11: 0.3709 T22: 0.4087 REMARK 3 T33: 0.3618 T12: 0.0123 REMARK 3 T13: 0.0106 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 8.3180 L22: 3.7467 REMARK 3 L33: 4.0437 L12: -1.6195 REMARK 3 L13: -5.5027 L23: 2.2705 REMARK 3 S TENSOR REMARK 3 S11: 0.2046 S12: 0.8584 S13: 0.0770 REMARK 3 S21: 0.0519 S22: -0.2987 S23: 0.0180 REMARK 3 S31: -0.1917 S32: -1.1748 S33: 0.1155 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6780 17.6077 33.4858 REMARK 3 T TENSOR REMARK 3 T11: 0.6016 T22: 0.6816 REMARK 3 T33: 0.3358 T12: 0.0000 REMARK 3 T13: 0.0327 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 8.6424 L22: 5.9336 REMARK 3 L33: 2.8669 L12: -0.6544 REMARK 3 L13: 3.6407 L23: -2.9185 REMARK 3 S TENSOR REMARK 3 S11: 0.0130 S12: -0.7890 S13: 0.3025 REMARK 3 S21: 0.7857 S22: -0.3284 S23: -0.1451 REMARK 3 S31: 0.8323 S32: 0.4881 S33: 0.2693 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4292 13.5503 27.7935 REMARK 3 T TENSOR REMARK 3 T11: 0.3630 T22: 0.6237 REMARK 3 T33: 0.3314 T12: -0.0118 REMARK 3 T13: 0.0141 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 4.3325 L22: 3.5168 REMARK 3 L33: 8.1816 L12: 2.0970 REMARK 3 L13: 5.8469 L23: 3.2780 REMARK 3 S TENSOR REMARK 3 S11: 0.0697 S12: -1.3448 S13: -0.3590 REMARK 3 S21: 0.1296 S22: 0.1428 S23: -0.1551 REMARK 3 S31: -0.2749 S32: -0.1898 S33: -0.1824 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.1054 14.1408 29.7439 REMARK 3 T TENSOR REMARK 3 T11: 0.4174 T22: 0.7297 REMARK 3 T33: 0.5085 T12: -0.0521 REMARK 3 T13: -0.0934 T23: 0.1048 REMARK 3 L TENSOR REMARK 3 L11: 2.2153 L22: 8.8657 REMARK 3 L33: 3.4850 L12: -1.1406 REMARK 3 L13: 2.2288 L23: -0.8483 REMARK 3 S TENSOR REMARK 3 S11: -0.3272 S12: 0.2022 S13: -0.1211 REMARK 3 S21: 0.4456 S22: -0.1540 S23: -1.2912 REMARK 3 S31: -0.0458 S32: 1.2295 S33: 0.4850 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3616 6.5004 23.8408 REMARK 3 T TENSOR REMARK 3 T11: 0.4290 T22: 0.4896 REMARK 3 T33: 0.6069 T12: 0.0625 REMARK 3 T13: -0.0379 T23: 0.1082 REMARK 3 L TENSOR REMARK 3 L11: 9.4058 L22: 8.3551 REMARK 3 L33: 7.8283 L12: 6.7037 REMARK 3 L13: 0.3003 L23: 3.7757 REMARK 3 S TENSOR REMARK 3 S11: 0.3012 S12: 0.5323 S13: -1.0911 REMARK 3 S21: 0.0683 S22: -0.0527 S23: 0.5138 REMARK 3 S31: 0.1026 S32: -0.0845 S33: -0.1164 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.0972 5.9803 18.9601 REMARK 3 T TENSOR REMARK 3 T11: 0.5169 T22: 0.5890 REMARK 3 T33: 0.3420 T12: 0.0474 REMARK 3 T13: 0.0276 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 8.7558 L22: 9.6097 REMARK 3 L33: 9.7375 L12: 5.7815 REMARK 3 L13: 1.3361 L23: 3.4311 REMARK 3 S TENSOR REMARK 3 S11: -0.3534 S12: 1.2546 S13: -0.5424 REMARK 3 S21: 0.4762 S22: 0.7917 S23: 0.0732 REMARK 3 S31: 0.3430 S32: -0.3035 S33: -0.2213 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.0906 14.9777 19.3416 REMARK 3 T TENSOR REMARK 3 T11: 0.4428 T22: 0.5350 REMARK 3 T33: 0.5021 T12: -0.0216 REMARK 3 T13: 0.0256 T23: -0.1046 REMARK 3 L TENSOR REMARK 3 L11: 9.8616 L22: 3.4998 REMARK 3 L33: 8.0273 L12: 5.6129 REMARK 3 L13: 5.6672 L23: 4.2162 REMARK 3 S TENSOR REMARK 3 S11: -0.1734 S12: -0.1514 S13: -0.6096 REMARK 3 S21: -0.3597 S22: 0.2149 S23: -1.0214 REMARK 3 S31: 0.3037 S32: 0.7500 S33: 0.0947 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.6321 1.8769 12.6477 REMARK 3 T TENSOR REMARK 3 T11: 0.9032 T22: 1.0014 REMARK 3 T33: 0.7886 T12: -0.2602 REMARK 3 T13: -0.0401 T23: -0.0838 REMARK 3 L TENSOR REMARK 3 L11: 2.9026 L22: 4.9767 REMARK 3 L33: 6.2267 L12: 2.8376 REMARK 3 L13: -4.1785 L23: -4.7797 REMARK 3 S TENSOR REMARK 3 S11: -0.5876 S12: 2.2725 S13: -0.2070 REMARK 3 S21: -1.2018 S22: 0.8941 S23: 0.9803 REMARK 3 S31: 2.0516 S32: -1.2400 S33: -0.2659 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.9651 20.2353 13.7902 REMARK 3 T TENSOR REMARK 3 T11: 0.4037 T22: 0.5754 REMARK 3 T33: 0.4485 T12: -0.0799 REMARK 3 T13: 0.1004 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.4172 L22: 4.2081 REMARK 3 L33: 8.0747 L12: 1.7295 REMARK 3 L13: 1.5476 L23: 5.7022 REMARK 3 S TENSOR REMARK 3 S11: -0.2408 S12: 0.0610 S13: 0.7206 REMARK 3 S21: -0.7399 S22: 0.7225 S23: -0.1810 REMARK 3 S31: -0.6438 S32: 1.1443 S33: -0.5059 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6748 8.5365 30.1087 REMARK 3 T TENSOR REMARK 3 T11: 0.5283 T22: 0.7864 REMARK 3 T33: 0.4476 T12: -0.1659 REMARK 3 T13: 0.0302 T23: 0.1608 REMARK 3 L TENSOR REMARK 3 L11: 4.4136 L22: 4.5243 REMARK 3 L33: 6.3890 L12: -1.2116 REMARK 3 L13: -0.3340 L23: 0.1271 REMARK 3 S TENSOR REMARK 3 S11: 0.4606 S12: -1.0613 S13: -0.9724 REMARK 3 S21: 1.1539 S22: 0.0872 S23: 0.8056 REMARK 3 S31: 1.0443 S32: -1.4621 S33: -0.4947 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7354 13.1332 10.6333 REMARK 3 T TENSOR REMARK 3 T11: 0.3673 T22: 0.3786 REMARK 3 T33: 0.3522 T12: -0.0113 REMARK 3 T13: -0.0053 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 7.8504 L22: 3.7510 REMARK 3 L33: 7.9475 L12: 0.0436 REMARK 3 L13: 3.3006 L23: -1.2230 REMARK 3 S TENSOR REMARK 3 S11: 0.2063 S12: 0.1521 S13: -0.2756 REMARK 3 S21: -0.2354 S22: 0.0127 S23: 0.3514 REMARK 3 S31: 0.2567 S32: -0.4977 S33: -0.1577 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6129 11.5948 13.3364 REMARK 3 T TENSOR REMARK 3 T11: 0.3649 T22: 0.3840 REMARK 3 T33: 0.3523 T12: 0.0156 REMARK 3 T13: -0.0001 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 8.4882 L22: 3.5149 REMARK 3 L33: 4.0063 L12: -1.0181 REMARK 3 L13: 5.4739 L23: -1.9223 REMARK 3 S TENSOR REMARK 3 S11: 0.1809 S12: 0.8594 S13: -0.0793 REMARK 3 S21: 0.0312 S22: -0.2129 S23: 0.0063 REMARK 3 S31: 0.2470 S32: 1.1618 S33: -0.0293 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8593 16.7467 30.7410 REMARK 3 T TENSOR REMARK 3 T11: 0.4153 T22: 0.6050 REMARK 3 T33: 0.3167 T12: -0.0128 REMARK 3 T13: -0.0231 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 3.3301 L22: 4.8003 REMARK 3 L33: 6.0114 L12: 0.5147 REMARK 3 L13: -1.6200 L23: -0.4992 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: -0.7362 S13: -0.0517 REMARK 3 S21: 0.5184 S22: 0.1598 S23: 0.0474 REMARK 3 S31: -0.0998 S32: -0.3917 S33: -0.0483 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8645 18.2563 29.7470 REMARK 3 T TENSOR REMARK 3 T11: 0.4366 T22: 0.7579 REMARK 3 T33: 0.5142 T12: -0.0563 REMARK 3 T13: 0.1274 T23: -0.1065 REMARK 3 L TENSOR REMARK 3 L11: 2.1688 L22: 8.0404 REMARK 3 L33: 2.0577 L12: -1.4644 REMARK 3 L13: -1.9378 L23: 0.5747 REMARK 3 S TENSOR REMARK 3 S11: -0.3915 S12: 0.1298 S13: 0.0523 REMARK 3 S21: 0.5706 S22: -0.1024 S23: 1.2126 REMARK 3 S31: 0.0879 S32: -0.9601 S33: 0.5812 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7737 26.1449 21.5181 REMARK 3 T TENSOR REMARK 3 T11: 0.4417 T22: 0.4967 REMARK 3 T33: 0.5002 T12: 0.0627 REMARK 3 T13: 0.0119 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 8.9241 L22: 9.3788 REMARK 3 L33: 9.4757 L12: 7.6045 REMARK 3 L13: -0.8528 L23: -3.2227 REMARK 3 S TENSOR REMARK 3 S11: -0.2480 S12: 0.6380 S13: 0.8264 REMARK 3 S21: -0.1386 S22: 0.3760 S23: -0.1711 REMARK 3 S31: -0.3124 S32: 0.1702 S33: -0.0653 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8666 17.4235 19.3475 REMARK 3 T TENSOR REMARK 3 T11: 0.4414 T22: 0.5955 REMARK 3 T33: 0.5088 T12: -0.0356 REMARK 3 T13: -0.0130 T23: 0.1139 REMARK 3 L TENSOR REMARK 3 L11: 5.2464 L22: 5.7080 REMARK 3 L33: 5.0870 L12: 5.4174 REMARK 3 L13: -5.1121 L23: -5.1328 REMARK 3 S TENSOR REMARK 3 S11: -0.2174 S12: 0.1381 S13: 0.6177 REMARK 3 S21: -0.6889 S22: 0.3640 S23: 1.1286 REMARK 3 S31: -0.0367 S32: -0.7700 S33: -0.0295 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3203 30.5213 12.6424 REMARK 3 T TENSOR REMARK 3 T11: 0.7915 T22: 1.1023 REMARK 3 T33: 0.8370 T12: -0.2794 REMARK 3 T13: 0.0238 T23: 0.0979 REMARK 3 L TENSOR REMARK 3 L11: 4.6598 L22: 5.9227 REMARK 3 L33: 2.4849 L12: 5.2070 REMARK 3 L13: 2.3632 L23: 2.6175 REMARK 3 S TENSOR REMARK 3 S11: -1.0429 S12: 1.1567 S13: -0.2880 REMARK 3 S21: -1.8070 S22: 0.5962 S23: -1.2131 REMARK 3 S31: -1.3975 S32: 1.7917 S33: 0.6027 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9912 12.1630 13.7974 REMARK 3 T TENSOR REMARK 3 T11: 0.3704 T22: 0.5846 REMARK 3 T33: 0.3817 T12: -0.0778 REMARK 3 T13: -0.0982 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 8.5297 L22: 3.2375 REMARK 3 L33: 9.2647 L12: 1.9672 REMARK 3 L13: -1.7235 L23: -5.3338 REMARK 3 S TENSOR REMARK 3 S11: -0.1232 S12: -0.0237 S13: -0.5501 REMARK 3 S21: -0.9009 S22: 0.4343 S23: 0.4128 REMARK 3 S31: 0.6039 S32: -1.0075 S33: -0.2633 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ -1:134 ) AND (NOT REMARK 3 ELEMENT H) REMARK 3 SELECTION : CHAIN B AND (RESSEQ -1:134 ) AND (NOT REMARK 3 ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 1153 REMARK 3 RMSD : 0.015 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HI8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000215518. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00005 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE NOVEMBER 3, 2014 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60405 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.530 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.95400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4O4O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M GLYCINE, 0.05 M MGACETATE, 32 % REMARK 280 PEG 400, PH 9.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 31.64500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 31.64500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 104 OD1 ASP A 117 1.49 REMARK 500 OG SER B 104 OD1 ASP B 117 2.14 REMARK 500 O HOH A 335 O HOH A 337 2.16 REMARK 500 OG SER A 104 OD1 ASP A 117 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 76.28 -153.13 REMARK 500 CYS A 76 110.91 -170.63 REMARK 500 ILE A 85 -37.52 -137.39 REMARK 500 TRP A 97 -79.97 -85.41 REMARK 500 ASP A 111 13.26 -140.60 REMARK 500 ASN B 15 41.42 -108.01 REMARK 500 ASN B 22 76.42 -152.47 REMARK 500 CYS B 76 109.82 -171.65 REMARK 500 ILE B 85 -37.08 -136.82 REMARK 500 TRP B 97 -79.72 -85.41 REMARK 500 ASP B 111 13.17 -140.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 301 O REMARK 620 2 HOH A 303 O 89.0 REMARK 620 3 HOH A 327 O 86.3 105.8 REMARK 620 4 HOH B 311 O 86.7 165.4 87.9 REMARK 620 5 HOH B 320 O 96.6 83.8 170.1 82.8 REMARK 620 6 HOH B 339 O 173.5 96.9 89.4 88.2 86.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 311 O REMARK 620 2 HOH A 313 O 88.5 REMARK 620 3 HOH A 338 O 84.8 86.9 REMARK 620 4 HOH B 302 O 100.9 89.3 173.0 REMARK 620 5 HOH B 305 O 94.2 175.1 97.3 86.3 REMARK 620 6 HOH B 326 O 172.9 86.6 89.8 84.1 91.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 DBREF 5HI8 A 1 134 UNP E3SMK9 E3SMK9_9CAUD 1 134 DBREF 5HI8 B 1 134 UNP E3SMK9 E3SMK9_9CAUD 1 134 SEQADV 5HI8 ASN A -1 UNP E3SMK9 EXPRESSION TAG SEQADV 5HI8 SER A 0 UNP E3SMK9 EXPRESSION TAG SEQADV 5HI8 ASN B -1 UNP E3SMK9 EXPRESSION TAG SEQADV 5HI8 SER B 0 UNP E3SMK9 EXPRESSION TAG SEQRES 1 A 136 ASN SER MET ILE ASP LYS PHE CYS ASP TRP PHE GLU GLY SEQRES 2 A 136 GLU PHE ASP ASN TRP THR GLN ALA ALA SER ASN PRO THR SEQRES 3 A 136 LYS TRP ALA HIS ILE ILE VAL LYS HIS GLU LYS ILE SER SEQRES 4 A 136 GLU TYR LYS TYR HIS THR SER SER ARG TYR SER TYR MET SEQRES 5 A 136 ASP LYS PRO TYR ARG GLU GLN THR VAL ASP ILE GLU TYR SEQRES 6 A 136 VAL CYS PRO GLU LEU ILE ILE VAL HIS ASN PRO ALA CYS SEQRES 7 A 136 ASP ILE ILE PHE LYS TRP THR GLY ILE TYR PHE GLU GLY SEQRES 8 A 136 GLU SER GLU PRO ASP CYS GLN TRP ASN GLY GLN PRO LEU SEQRES 9 A 136 ASP SER LYS ALA ARG LEU TYR ALA ASP GLU TYR HIS THR SEQRES 10 A 136 TRP ASP VAL GLY TYR TRP GLU GLY SER GLU GLY PHE PHE SEQRES 11 A 136 HIS PHE LYS LYS ASN VAL SEQRES 1 B 136 ASN SER MET ILE ASP LYS PHE CYS ASP TRP PHE GLU GLY SEQRES 2 B 136 GLU PHE ASP ASN TRP THR GLN ALA ALA SER ASN PRO THR SEQRES 3 B 136 LYS TRP ALA HIS ILE ILE VAL LYS HIS GLU LYS ILE SER SEQRES 4 B 136 GLU TYR LYS TYR HIS THR SER SER ARG TYR SER TYR MET SEQRES 5 B 136 ASP LYS PRO TYR ARG GLU GLN THR VAL ASP ILE GLU TYR SEQRES 6 B 136 VAL CYS PRO GLU LEU ILE ILE VAL HIS ASN PRO ALA CYS SEQRES 7 B 136 ASP ILE ILE PHE LYS TRP THR GLY ILE TYR PHE GLU GLY SEQRES 8 B 136 GLU SER GLU PRO ASP CYS GLN TRP ASN GLY GLN PRO LEU SEQRES 9 B 136 ASP SER LYS ALA ARG LEU TYR ALA ASP GLU TYR HIS THR SEQRES 10 B 136 TRP ASP VAL GLY TYR TRP GLU GLY SER GLU GLY PHE PHE SEQRES 11 B 136 HIS PHE LYS LYS ASN VAL HET MG A 201 1 HET ACT A 202 7 HET MG B 201 1 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 3 MG 2(MG 2+) FORMUL 4 ACT C2 H3 O2 1- FORMUL 6 HOH *77(H2 O) HELIX 1 AA1 SER A 0 GLU A 10 1 11 HELIX 2 AA2 ASN A 15 ASN A 22 1 8 HELIX 3 AA3 SER B 0 GLU B 10 1 11 HELIX 4 AA4 ASN B 15 ASN B 22 1 8 SHEET 1 AA111 GLY A 11 ASP A 14 0 SHEET 2 AA111 ILE A 29 SER A 37 -1 O VAL A 31 N PHE A 13 SHEET 3 AA111 LYS A 40 TYR A 47 -1 O LYS A 40 N ILE A 36 SHEET 4 AA111 ARG A 55 VAL A 64 -1 O GLN A 57 N THR A 43 SHEET 5 AA111 LEU A 68 HIS A 72 -1 O HIS A 72 N ASP A 60 SHEET 6 AA111 ILE A 78 TRP A 82 -1 O PHE A 80 N ILE A 69 SHEET 7 AA111 PHE A 87 SER A 91 -1 O GLU A 90 N ILE A 79 SHEET 8 AA111 LEU A 102 LEU A 108 -1 O ALA A 106 N GLY A 89 SHEET 9 AA111 GLU A 112 GLY A 119 -1 O HIS A 114 N ARG A 107 SHEET 10 AA111 PHE A 128 LYS A 132 -1 O PHE A 128 N THR A 115 SHEET 11 AA111 GLY A 11 ASP A 14 -1 N ASP A 14 O LYS A 131 SHEET 1 AA211 GLY B 11 ASP B 14 0 SHEET 2 AA211 ILE B 29 SER B 37 -1 O HIS B 33 N GLY B 11 SHEET 3 AA211 LYS B 40 TYR B 47 -1 O HIS B 42 N GLU B 34 SHEET 4 AA211 ARG B 55 VAL B 64 -1 O GLN B 57 N THR B 43 SHEET 5 AA211 LEU B 68 HIS B 72 -1 O HIS B 72 N ASP B 60 SHEET 6 AA211 ILE B 78 TRP B 82 -1 O PHE B 80 N ILE B 69 SHEET 7 AA211 PHE B 87 SER B 91 -1 O GLU B 88 N LYS B 81 SHEET 8 AA211 LEU B 102 LEU B 108 -1 O ALA B 106 N GLY B 89 SHEET 9 AA211 GLU B 112 GLY B 119 -1 O HIS B 114 N ARG B 107 SHEET 10 AA211 PHE B 128 LYS B 132 -1 O PHE B 128 N THR B 115 SHEET 11 AA211 GLY B 11 ASP B 14 -1 N ASP B 14 O LYS B 131 SSBOND 1 CYS A 65 CYS B 65 1555 2756 2.05 SSBOND 2 CYS A 76 CYS A 95 1555 1555 2.04 SSBOND 3 CYS B 76 CYS B 95 1555 1555 2.04 LINK MG MG A 201 O HOH A 301 1555 1555 2.22 LINK MG MG A 201 O HOH A 303 1555 1555 2.17 LINK MG MG A 201 O HOH A 327 1555 1555 2.03 LINK MG MG A 201 O HOH B 311 1555 1555 2.33 LINK MG MG A 201 O HOH B 320 1555 1555 1.98 LINK MG MG A 201 O HOH B 339 1555 1555 2.18 LINK O HOH A 311 MG MG B 201 1555 1555 1.97 LINK O HOH A 313 MG MG B 201 1555 1555 2.27 LINK O HOH A 338 MG MG B 201 1555 1555 2.23 LINK MG MG B 201 O HOH B 302 1555 1555 2.20 LINK MG MG B 201 O HOH B 305 1555 1555 2.17 LINK MG MG B 201 O HOH B 326 1555 1555 2.12 CISPEP 1 ASN A -1 SER A 0 0 -9.71 CISPEP 2 CYS A 65 PRO A 66 0 -2.57 CISPEP 3 ASN B -1 SER B 0 0 -9.36 CISPEP 4 CYS B 65 PRO B 66 0 -3.19 SITE 1 AC1 6 HOH A 301 HOH A 303 HOH A 327 HOH B 311 SITE 2 AC1 6 HOH B 320 HOH B 339 SITE 1 AC2 6 GLU A 56 GLN A 57 HOH A 307 HOH A 321 SITE 2 AC2 6 GLU B 56 GLN B 57 SITE 1 AC3 6 HOH A 311 HOH A 313 HOH A 338 HOH B 302 SITE 2 AC3 6 HOH B 305 HOH B 326 CRYST1 63.290 61.680 93.340 90.00 109.77 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015800 0.000000 0.005680 0.00000 SCALE2 0.000000 0.016213 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011385 0.00000