HEADER METAL BINDING PROTEIN 12-JAN-16 5HIS TITLE CRYSTAL STRUCTURE OF PQS RESPONSE PROTEIN PQSE IN COMPLEX WITH 3- TITLE 2 METHYLTHIOPHENE-2-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PQSE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 GENE: PA1000; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS QUORUM SENSING, PQS, PQSE, INHIBITOR, PSEUDOMONAS, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.WITZGALL,W.BLANKENFELDT REVDAT 3 10-JAN-24 5HIS 1 LINK REVDAT 2 29-JUN-16 5HIS 1 JRNL REVDAT 1 27-APR-16 5HIS 0 JRNL AUTH M.ZENDER,F.WITZGALL,S.L.DREES,E.WEIDEL,C.K.MAURER,S.FETZNER, JRNL AUTH 2 W.BLANKENFELDT,M.EMPTING,R.W.HARTMANN JRNL TITL DISSECTING THE MULTIPLE ROLES OF PQSE IN PSEUDOMONAS JRNL TITL 2 AERUGINOSA VIRULENCE BY DISCOVERY OF SMALL TOOL COMPOUNDS. JRNL REF ACS CHEM.BIOL. V. 11 1755 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 27082157 JRNL DOI 10.1021/ACSCHEMBIO.6B00156 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7775 - 3.9359 1.00 2940 149 0.1567 0.1959 REMARK 3 2 3.9359 - 3.1242 1.00 2813 127 0.1508 0.1595 REMARK 3 3 3.1242 - 2.7293 1.00 2745 149 0.1652 0.2267 REMARK 3 4 2.7293 - 2.4798 1.00 2736 147 0.1599 0.1975 REMARK 3 5 2.4798 - 2.3021 1.00 2722 137 0.1551 0.2066 REMARK 3 6 2.3021 - 2.1663 1.00 2758 120 0.1550 0.1836 REMARK 3 7 2.1663 - 2.0578 1.00 2698 142 0.1600 0.1966 REMARK 3 8 2.0578 - 1.9683 1.00 2708 129 0.1674 0.2211 REMARK 3 9 1.9683 - 1.8925 1.00 2720 123 0.1815 0.2085 REMARK 3 10 1.8925 - 1.8272 1.00 2697 152 0.2205 0.2740 REMARK 3 11 1.8272 - 1.7701 1.00 2687 151 0.2668 0.3390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2467 REMARK 3 ANGLE : 1.097 3347 REMARK 3 CHIRALITY : 0.061 365 REMARK 3 PLANARITY : 0.007 437 REMARK 3 DIHEDRAL : 10.817 1470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 18 THROUGH 93 )) OR ( CHAIN REMARK 3 'A' AND RESID 999 ) OR ( CHAIN 'S' AND RESID 1 ) OR REMARK 3 ( CHAIN 'S' AND RESID 5 ) OR ( CHAIN 'S' AND RESID 8 REMARK 3 ) OR ( CHAIN 'S' AND RESID 13 ) OR ( CHAIN 'S' AND REMARK 3 RESID 15 ) OR ( CHAIN 'S' AND RESID 17 ) OR ( CHAIN ' REMARK 3 S' AND RESID 21 ) OR ( CHAIN 'S' AND RESID 24 ) OR REMARK 3 ( CHAIN 'S' AND RESID 30 ) OR ( CHAIN 'S' AND RESID REMARK 3 31 ) OR ( CHAIN 'S' AND RESID 39 ) OR ( CHAIN 'S' REMARK 3 AND RESID 45 ) OR ( CHAIN 'S' AND RESID 46 ) OR ( REMARK 3 CHAIN ' S' AND RESID 58 ) OR ( CHAIN 'S' AND RESID REMARK 3 60 ) OR ( CHAIN 'S' AND RESID 62 ) OR ( CHAIN 'S' REMARK 3 AND RESID 63 ) OR ( CHAIN 'S' AND RESID 71 ) OR ( REMARK 3 CHAIN 'S' AND RESID 72 ) OR ( CHAIN 'S' AND RESID 79 REMARK 3 ) OR ( CHAIN ' S' AND RESID 85 ) OR ( CHAIN 'S' AND REMARK 3 RESID 92 ) OR ( CHAIN 'S' AND RESID 93 ) OR ( CHAIN ' REMARK 3 S' AND RESID 102 ) OR ( CHAIN 'S' AND RESID 105 ) OR REMARK 3 ( CHAIN 'S' AND RESID 109 ) OR ( CHAIN 'S' AND RESID REMARK 3 110 ) OR ( CHAIN 'S' AND RESID 118 ) OR ( CHAIN 'S' REMARK 3 AND RESID 126 ) OR ( CHAIN 'S' AND RESID 132 ) OR ( REMARK 3 CHAIN 'S' AND RESID 140 ) OR ( CHAIN 'S' AND RESID REMARK 3 141 ) OR ( CHAIN 'S' AND RESID 142 ) OR ( CHAIN 'S' REMARK 3 AND RESID 143 ) OR ( CHAIN 'S' AND RESID 144 ) OR ( REMARK 3 CHAIN 'S' AND RESID 160 ) OR ( CHAIN 'S' AND RESID REMARK 3 161 ) OR ( CHAIN 'S' AND RESID 162 ) OR ( CHAIN 'S' REMARK 3 AND RESID 165 ) OR ( CHAIN 'S' AND RESID 166 ) OR ( REMARK 3 CHAIN 'S' AND RESID 179 ) OR ( CHAIN 'S' AND RESID REMARK 3 187 ) OR ( CHAIN 'S' AND RESID 189 )) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5726 -9.8156 -13.1443 REMARK 3 T TENSOR REMARK 3 T11: 0.2844 T22: 0.2552 REMARK 3 T33: 0.2100 T12: 0.0313 REMARK 3 T13: 0.0540 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 2.0346 L22: 2.4183 REMARK 3 L33: 1.7927 L12: -0.9635 REMARK 3 L13: -0.1450 L23: -0.1214 REMARK 3 S TENSOR REMARK 3 S11: -0.0812 S12: -0.1890 S13: -0.1754 REMARK 3 S21: 0.4100 S22: 0.0983 S23: 0.3528 REMARK 3 S31: -0.0565 S32: -0.3199 S33: -0.0259 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 94 THROUGH 116 )) OR ( CHAIN REMARK 3 'S' AND RESID 25 ) OR ( CHAIN 'S' AND RESID 54 ) OR REMARK 3 ( CHAIN 'S' AND RESID 145 ) OR ( CHAIN 'S' AND RESID REMARK 3 146 ) OR ( CHAIN 'S' AND RESID 147 ) OR ( CHAIN 'S' REMARK 3 AND RESID 163 ) OR ( CHAIN 'S' AND RESID 164 ) OR ( REMARK 3 CHAIN 'S' AND RESID 177 ) OR ( CHAIN 'S' AND RESID REMARK 3 182 )) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3050 -1.7707 0.4338 REMARK 3 T TENSOR REMARK 3 T11: 0.6478 T22: 0.4978 REMARK 3 T33: 0.2070 T12: 0.1049 REMARK 3 T13: 0.0005 T23: -0.0700 REMARK 3 L TENSOR REMARK 3 L11: 1.3130 L22: 0.4910 REMARK 3 L33: 1.4858 L12: 0.3644 REMARK 3 L13: 0.8267 L23: -0.3840 REMARK 3 S TENSOR REMARK 3 S11: -0.1253 S12: -0.6687 S13: 0.2458 REMARK 3 S21: 0.6445 S22: -0.0778 S23: 0.0575 REMARK 3 S31: -0.2481 S32: -0.1755 S33: -0.0089 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 117 THROUGH 136 )) OR ( REMARK 3 CHAIN 'S' AND RESID 106 ) OR ( CHAIN 'S' AND RESID REMARK 3 114 ) OR ( CHAIN 'S' AND RESID 148 ) OR ( CHAIN 'S' REMARK 3 AND RESID 167 ) OR ( CHAIN 'S' AND RESID 168 ) OR ( REMARK 3 CHAIN 'S' AND RESID 169 ) OR ( CHAIN 'S' AND RESID REMARK 3 180 ) OR ( CHAIN 'S' AND RESID 181 )) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4889 -3.9593 -3.7810 REMARK 3 T TENSOR REMARK 3 T11: 0.6107 T22: 0.5365 REMARK 3 T33: 0.3213 T12: 0.1427 REMARK 3 T13: 0.1298 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 2.4733 L22: 0.6133 REMARK 3 L33: 1.4027 L12: 0.3170 REMARK 3 L13: 0.2810 L23: 0.9219 REMARK 3 S TENSOR REMARK 3 S11: -0.0680 S12: -0.6789 S13: 0.2094 REMARK 3 S21: -0.1281 S22: 0.0639 S23: 0.2601 REMARK 3 S31: -0.0310 S32: -0.4556 S33: 0.0922 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 137 THROUGH 155 )) OR ( REMARK 3 CHAIN 'S' AND RESID 12 ) OR ( CHAIN 'S' AND RESID 57 REMARK 3 ) OR ( CHAIN 'S' AND RESID 67 ) OR ( CHAIN 'S' AND REMARK 3 RESID 74 ) OR ( CHAIN 'S' AND RESID 76 ) OR ( CHAIN ' REMARK 3 S' AND RESID 83 ) OR ( CHAIN 'S' AND RESID 91 ) OR ( REMARK 3 CHAIN 'S' AND RESID 121 ) OR ( CHAIN 'S' AND RESID REMARK 3 133 ) OR ( CHAIN 'S' AND RESID 149 ) OR ( CHAIN 'S' REMARK 3 AND RESID 150 ) OR ( CHAIN 'S' AND RESID 170 ) OR ( REMARK 3 CHAIN 'S' AND RESID 194 )) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2632 -23.2805 -11.9334 REMARK 3 T TENSOR REMARK 3 T11: 0.4381 T22: 0.2227 REMARK 3 T33: 0.3749 T12: 0.0571 REMARK 3 T13: -0.0076 T23: 0.0561 REMARK 3 L TENSOR REMARK 3 L11: 3.3631 L22: 1.2657 REMARK 3 L33: 2.0601 L12: 0.3279 REMARK 3 L13: 0.3716 L23: 0.0999 REMARK 3 S TENSOR REMARK 3 S11: -0.1299 S12: -0.1955 S13: -0.7407 REMARK 3 S21: 0.4493 S22: 0.0344 S23: -0.1567 REMARK 3 S31: 0.4925 S32: 0.1713 S33: 0.1241 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 156 THROUGH 210 )) OR ( REMARK 3 CHAIN 'A' AND RESID 998 ) OR ( CHAIN 'S' AND RESID 3 REMARK 3 ) OR ( CHAIN 'S' AND RESID 4 ) OR ( CHAIN 'S' AND REMARK 3 RESID 10 ) OR ( CHAIN 'S' AND RESID 11 ) OR ( CHAIN ' REMARK 3 S' AND RESID 18 ) OR ( CHAIN 'S' AND RESID 19 ) OR ( REMARK 3 CHAIN 'S' AND RESID 22 ) OR ( CHAIN 'S' AND RESID 26 REMARK 3 ) OR ( CHAIN 'S' AND RESID 27 ) OR ( CHAIN 'S' AND REMARK 3 RESID 35 ) OR ( CHAIN 'S' AND RESID 36 ) OR ( CHAIN ' REMARK 3 S' AND RESID 37 ) OR ( CHAIN 'S' AND RESID 40 ) OR REMARK 3 ( CHAIN 'S' AND RESID 43 ) OR ( CHAIN 'S' AND RESID REMARK 3 52 ) OR ( CHAIN 'S' AND RESID 53 ) OR ( CHAIN 'S' REMARK 3 AND RESID 59 ) OR ( CHAIN 'S' AND RESID 68 ) OR ( REMARK 3 CHAIN ' S' AND RESID 69 ) OR ( CHAIN 'S' AND RESID REMARK 3 70 ) OR ( CHAIN 'S' AND RESID 78 ) OR ( CHAIN 'S' REMARK 3 AND RESID 81 ) OR ( CHAIN 'S' AND RESID 82 ) OR ( REMARK 3 CHAIN 'S' AND RESID 86 ) OR ( CHAIN 'S' AND RESID 88 REMARK 3 ) OR ( CHAIN ' S' AND RESID 89 ) OR ( CHAIN 'S' AND REMARK 3 RESID 104 ) OR ( CHAIN 'S' AND RESID 108 ) OR ( REMARK 3 CHAIN 'S' AND RESID 111 ) OR ( CHAIN 'S' AND RESID REMARK 3 119 ) OR ( CHAIN 'S' AND RESID 122 ) OR ( CHAIN 'S' REMARK 3 AND RESID 125 ) OR ( CHAIN 'S' AND RESID 128 ) OR ( REMARK 3 CHAIN 'S' AND RESID 139 ) OR ( CHAIN 'S' AND RESID REMARK 3 151 ) OR ( CHAIN 'S' AND RESID 152 ) OR ( CHAIN 'S' REMARK 3 AND RESID 171 ) OR ( CHAIN 'S' AND RESID 178 ) OR ( REMARK 3 CHAIN 'S' AND RESID 183 ) OR ( CHAIN 'S' AND RESID REMARK 3 184 ) OR ( CHAIN 'S' AND RESID 195 ) OR ( CHAIN 'S' REMARK 3 AND RESID 196 ) OR ( CHAIN 'S' AND RESID 201 ) OR ( REMARK 3 CHAIN 'S' AND RESID 203 ) OR ( CHAIN 'S' AND RESID REMARK 3 208 ) OR ( CHAIN 'B' AND RESID 1 )) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2172 -8.8561 -15.1148 REMARK 3 T TENSOR REMARK 3 T11: 0.2780 T22: 0.1935 REMARK 3 T33: 0.1995 T12: 0.0404 REMARK 3 T13: -0.0888 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.9811 L22: 1.3320 REMARK 3 L33: 1.5566 L12: 0.2915 REMARK 3 L13: -0.3554 L23: -0.1393 REMARK 3 S TENSOR REMARK 3 S11: -0.1073 S12: -0.1049 S13: -0.0368 REMARK 3 S21: 0.3722 S22: 0.0643 S23: -0.1828 REMARK 3 S31: -0.0372 S32: 0.1337 S33: 0.0457 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 211 THROUGH 278 )) OR ( REMARK 3 CHAIN 'S' AND RESID 2 ) OR ( CHAIN 'S' AND RESID 6 ) REMARK 3 OR ( CHAIN 'S' AND RESID 7 ) OR ( CHAIN 'S' AND REMARK 3 RESID 9 ) OR ( CHAIN 'S' AND RESID 14 ) OR ( CHAIN ' REMARK 3 S' AND RESID 16 ) OR ( CHAIN 'S' AND RESID 20 ) OR ( REMARK 3 CHAIN ' S' AND RESID 23 ) OR ( CHAIN 'S' AND RESID REMARK 3 28 ) OR ( CHAIN 'S' AND RESID 29 ) OR ( CHAIN 'S' REMARK 3 AND RESID 32 ) OR ( CHAIN 'S' AND RESID 34 ) OR ( REMARK 3 CHAIN 'S' AND RESID 38 ) OR ( CHAIN 'S' AND RESID 41 REMARK 3 ) OR ( CHAIN ' S' AND RESID 42 ) OR ( CHAIN 'S' AND REMARK 3 RESID 44 ) OR ( CHAIN 'S' AND RESID 47 ) OR ( CHAIN ' REMARK 3 S' AND RESID 48 ) OR ( CHAIN 'S' AND RESID 49 ) OR ( REMARK 3 CHAIN 'S' AND RESID 50 ) OR ( CHAIN 'S' AND RESID 51 REMARK 3 ) OR ( CHAIN ' S' AND RESID 55 ) OR ( CHAIN 'S' AND REMARK 3 RESID 56 ) OR ( CHAIN 'S' AND RESID 64 ) OR ( CHAIN ' REMARK 3 S' AND RESID 65 ) OR ( CHAIN 'S' AND RESID 66 ) OR ( REMARK 3 CHAIN 'S' AND RESID 73 ) OR ( CHAIN 'S' AND RESID 77 REMARK 3 ) OR ( CHAIN ' S' AND RESID 84 ) OR ( CHAIN 'S' AND REMARK 3 RESID 90 ) OR ( CHAIN 'S' AND RESID 95 ) OR ( CHAIN ' REMARK 3 S' AND RESID 96 ) OR ( CHAIN 'S' AND RESID 97 ) OR ( REMARK 3 CHAIN 'S' AND RESID 98 ) OR ( CHAIN 'S' AND RESID 99 REMARK 3 ) OR ( CHAIN ' S' AND RESID 101 ) OR ( CHAIN 'S' AND REMARK 3 RESID 107 ) OR ( CHAIN 'S' AND RESID 113 ) OR ( REMARK 3 CHAIN 'S' AND RESID 115 ) OR ( CHAIN 'S' AND RESID REMARK 3 120 ) OR ( CHAIN 'S' AND RESID 123 ) OR ( CHAIN 'S' REMARK 3 AND RESID 124 ) OR ( CHAIN 'S' AND RESID 127 ) OR ( REMARK 3 CHAIN 'S' AND RESID 129 ) OR ( CHAIN 'S' AND RESID REMARK 3 130 ) OR ( CHAIN 'S' AND RESID 135 ) OR ( CHAIN 'S' REMARK 3 AND RESID 138 ) OR ( CHAIN 'S' AND RESID 153 ) OR ( REMARK 3 CHAIN 'S' AND RESID 154 ) OR ( CHAIN 'S' AND RESID REMARK 3 155 ) OR ( CHAIN 'S' AND RESID 172 ) OR ( CHAIN 'S' REMARK 3 AND RESID 173 ) OR ( CHAIN 'S' AND RESID 174 ) OR ( REMARK 3 CHAIN 'S' AND RESID 175 ) OR ( CHAIN 'S' AND RESID REMARK 3 185 ) OR ( CHAIN 'S' AND RESID 197 ) OR ( CHAIN 'S' REMARK 3 AND RESID 198 ) OR ( CHAIN 'S' AND RESID 199 ) OR ( REMARK 3 CHAIN 'S' AND RESID 202 ) OR ( CHAIN 'S' AND RESID REMARK 3 211 ) OR ( CHAIN 'S' AND RESID 212 ) OR ( CHAIN 'S' REMARK 3 AND RESID 213 )) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3880 1.1905 -18.6503 REMARK 3 T TENSOR REMARK 3 T11: 0.3652 T22: 0.2289 REMARK 3 T33: 0.2698 T12: 0.0248 REMARK 3 T13: -0.1154 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.8379 L22: 1.3340 REMARK 3 L33: 1.3799 L12: 1.2564 REMARK 3 L13: -0.0962 L23: 0.4282 REMARK 3 S TENSOR REMARK 3 S11: -0.1197 S12: 0.0356 S13: 0.2375 REMARK 3 S21: 0.0795 S22: 0.0669 S23: -0.0043 REMARK 3 S31: -0.3131 S32: 0.1369 S33: 0.0543 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (( CHAIN 'A' AND (RESID 279 THROUGH 298 )) OR ( REMARK 3 CHAIN 'S' AND RESID 156 ) OR ( CHAIN 'S' AND RESID REMARK 3 176 ) OR ( CHAIN 'S' AND RESID 192 ) OR ( CHAIN 'S' REMARK 3 AND RESID 210 )) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5257 6.6857 -6.9034 REMARK 3 T TENSOR REMARK 3 T11: 0.5785 T22: 0.3459 REMARK 3 T33: 0.2868 T12: -0.0237 REMARK 3 T13: -0.0984 T23: -0.1025 REMARK 3 L TENSOR REMARK 3 L11: 2.9177 L22: 3.0713 REMARK 3 L33: 3.5630 L12: 0.9895 REMARK 3 L13: -0.5378 L23: 0.1271 REMARK 3 S TENSOR REMARK 3 S11: 0.2550 S12: -0.7574 S13: 0.1389 REMARK 3 S21: 0.4750 S22: -0.2236 S23: 0.3208 REMARK 3 S31: -0.1445 S32: 0.1181 S33: 0.0620 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31806 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 48.759 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 1.14000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2Q0I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 200 MM MGCL2, 31% REMARK 280 PEG400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.51800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.75900 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 48.75900 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 97.51800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 LEU A 298 REMARK 465 PRO A 299 REMARK 465 LEU A 300 REMARK 465 ASP A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 SD CE REMARK 470 GLU A 31 CD OE1 OE2 REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 GLN A 98 CD OE1 NE2 REMARK 470 GLU A 103 CD OE1 OE2 REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 ARG A 122 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 GLU A 199 CD OE1 OE2 REMARK 470 GLU A 206 CD OE1 OE2 REMARK 470 ARG A 287 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 209 O HOH A 511 1.59 REMARK 500 OD2 ASP A 12 O HOH A 501 1.79 REMARK 500 OD1 ASP A 19 O HOH A 502 1.79 REMARK 500 O HOH A 653 O HOH A 712 1.84 REMARK 500 O HOH A 555 O HOH A 666 1.98 REMARK 500 O GLY A 279 O HOH A 503 1.99 REMARK 500 O HOH A 653 O HOH A 713 1.99 REMARK 500 OE1 GLU A 155 O HOH A 504 2.05 REMARK 500 O HOH A 646 O HOH A 714 2.08 REMARK 500 OD1 ASP A 232 O HOH A 505 2.12 REMARK 500 O HOH A 507 O HOH A 657 2.14 REMARK 500 O HOH A 712 O HOH A 713 2.15 REMARK 500 O HOH A 663 O HOH A 689 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 5 39.85 -142.73 REMARK 500 GLU A 38 147.74 79.01 REMARK 500 ASP A 196 -52.79 -123.29 REMARK 500 THR A 213 130.23 -39.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 719 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 720 DISTANCE = 7.57 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 HIS A 71 ND1 86.4 REMARK 620 3 HIS A 159 NE2 98.3 83.6 REMARK 620 4 ASP A 178 OD2 95.9 176.6 93.6 REMARK 620 5 HOH A 520 O 119.5 101.7 141.9 79.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD2 REMARK 620 2 HIS A 74 NE2 83.6 REMARK 620 3 ASP A 178 OD2 157.2 88.4 REMARK 620 4 HIS A 221 NE2 83.6 89.0 117.7 REMARK 620 5 60P A 403 O08 93.1 171.5 97.5 82.8 REMARK 620 6 HOH A 520 O 81.1 97.7 78.9 162.4 89.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 60P A 403 DBREF 5HIS A 1 301 UNP P20581 Y1000_PSEAE 1 301 SEQADV 5HIS GLY A -1 UNP P20581 EXPRESSION TAG SEQADV 5HIS HIS A 0 UNP P20581 EXPRESSION TAG SEQRES 1 A 303 GLY HIS MET LEU ARG LEU SER ALA PRO GLY GLN LEU ASP SEQRES 2 A 303 ASP ASP LEU CYS LEU LEU GLY ASP VAL GLN VAL PRO VAL SEQRES 3 A 303 PHE LEU LEU ARG LEU GLY GLU ALA SER TRP ALA LEU VAL SEQRES 4 A 303 GLU GLY GLY ILE SER ARG ASP ALA GLU LEU VAL TRP ALA SEQRES 5 A 303 ASP LEU CYS ARG TRP VAL ALA ASP PRO SER GLN VAL HIS SEQRES 6 A 303 TYR TRP LEU ILE THR HIS LYS HIS TYR ASP HIS CYS GLY SEQRES 7 A 303 LEU LEU PRO TYR LEU CYS PRO ARG LEU PRO ASN VAL GLN SEQRES 8 A 303 VAL LEU ALA SER GLU ARG THR CYS GLN ALA TRP LYS SER SEQRES 9 A 303 GLU SER ALA VAL ARG VAL VAL GLU ARG LEU ASN ARG GLN SEQRES 10 A 303 LEU LEU ARG ALA GLU GLN ARG LEU PRO GLU ALA CYS ALA SEQRES 11 A 303 TRP ASP ALA LEU PRO VAL ARG ALA VAL ALA ASP GLY GLU SEQRES 12 A 303 TRP LEU GLU LEU GLY PRO ARG HIS ARG LEU GLN VAL ILE SEQRES 13 A 303 GLU ALA HIS GLY HIS SER ASP ASP HIS VAL VAL PHE TYR SEQRES 14 A 303 ASP VAL ARG ARG ARG ARG LEU PHE CYS GLY ASP ALA LEU SEQRES 15 A 303 GLY GLU PHE ASP GLU ALA GLU GLY VAL TRP ARG PRO LEU SEQRES 16 A 303 VAL PHE ASP ASP MET GLU ALA TYR LEU GLU SER LEU GLU SEQRES 17 A 303 ARG LEU GLN ARG LEU PRO THR LEU LEU GLN LEU ILE PRO SEQRES 18 A 303 GLY HIS GLY GLY LEU LEU ARG GLY ARG LEU ALA ALA ASP SEQRES 19 A 303 GLY ALA GLU SER ALA TYR THR GLU CYS LEU ARG LEU CYS SEQRES 20 A 303 ARG ARG LEU LEU TRP ARG GLN SER MET GLY GLU SER LEU SEQRES 21 A 303 ASP GLU LEU SER GLU GLU LEU HIS ARG ALA TRP GLY GLY SEQRES 22 A 303 GLN SER VAL ASP PHE LEU PRO GLY GLU LEU HIS LEU GLY SEQRES 23 A 303 SER MET ARG ARG MET LEU GLU ILE LEU SER ARG GLN ALA SEQRES 24 A 303 LEU PRO LEU ASP HET FE A 401 1 HET FE A 402 1 HET 60P A 403 14 HETNAM FE FE (III) ION HETNAM 60P 3-METHYLTHIOPHENE-2-CARBOXYLIC ACID FORMUL 2 FE 2(FE 3+) FORMUL 4 60P C6 H6 O2 S FORMUL 5 HOH *220(H2 O) HELIX 1 AA1 ILE A 41 ARG A 43 5 3 HELIX 2 AA2 ASP A 44 VAL A 56 1 13 HELIX 3 AA3 ASP A 58 SER A 60 5 3 HELIX 4 AA4 HIS A 71 GLY A 76 1 6 HELIX 5 AA5 LEU A 77 CYS A 82 1 6 HELIX 6 AA6 PRO A 83 LEU A 85 5 3 HELIX 7 AA7 GLU A 94 TRP A 100 1 7 HELIX 8 AA8 SER A 102 GLN A 115 1 14 HELIX 9 AA9 ALA A 128 LEU A 132 5 5 HELIX 10 AB1 ASP A 197 ARG A 210 1 14 HELIX 11 AB2 GLY A 227 ASP A 232 1 6 HELIX 12 AB3 ASP A 232 MET A 254 1 23 HELIX 13 AB4 SER A 257 GLY A 270 1 14 HELIX 14 AB5 GLU A 280 GLN A 296 1 17 SHEET 1 AA1 7 ARG A 3 LEU A 4 0 SHEET 2 AA1 7 LEU A 224 ARG A 226 -1 O LEU A 224 N LEU A 4 SHEET 3 AA1 7 GLN A 216 PRO A 219 -1 N LEU A 217 O LEU A 225 SHEET 4 AA1 7 ARG A 173 GLY A 177 1 N LEU A 174 O ILE A 218 SHEET 5 AA1 7 VAL A 164 ASP A 168 -1 N ASP A 168 O ARG A 173 SHEET 6 AA1 7 HIS A 149 GLU A 155 -1 N GLN A 152 O TYR A 167 SHEET 7 AA1 7 TRP A 142 GLY A 146 -1 N LEU A 143 O LEU A 151 SHEET 1 AA2 7 GLY A 8 ASP A 11 0 SHEET 2 AA2 7 LEU A 14 LEU A 17 -1 O LEU A 14 N LEU A 10 SHEET 3 AA2 7 VAL A 24 GLY A 30 -1 O VAL A 24 N LEU A 17 SHEET 4 AA2 7 SER A 33 VAL A 37 -1 O ALA A 35 N LEU A 27 SHEET 5 AA2 7 VAL A 62 LEU A 66 1 O LEU A 66 N LEU A 36 SHEET 6 AA2 7 GLN A 89 SER A 93 1 O LEU A 91 N TRP A 65 SHEET 7 AA2 7 VAL A 134 VAL A 137 1 O ARG A 135 N VAL A 90 SHEET 1 AA3 2 GLU A 182 PHE A 183 0 SHEET 2 AA3 2 TRP A 190 ARG A 191 -1 O ARG A 191 N GLU A 182 LINK NE2 HIS A 69 FE FE A 401 1555 1555 2.18 LINK ND1 HIS A 71 FE FE A 401 1555 1555 2.55 LINK OD2 ASP A 73 FE FE A 402 1555 1555 2.27 LINK NE2 HIS A 74 FE FE A 402 1555 1555 2.15 LINK NE2 HIS A 159 FE FE A 401 1555 1555 2.15 LINK OD2 ASP A 178 FE FE A 401 1555 1555 2.18 LINK OD2 ASP A 178 FE FE A 402 1555 1555 2.07 LINK NE2 HIS A 221 FE FE A 402 1555 1555 2.38 LINK FE FE A 401 O HOH A 520 1555 1555 1.87 LINK FE FE A 402 O08 60P A 403 1555 1555 1.96 LINK FE FE A 402 O HOH A 520 1555 1555 2.02 SITE 1 AC1 7 HIS A 69 HIS A 71 HIS A 159 ASP A 178 SITE 2 AC1 7 FE A 402 60P A 403 HOH A 520 SITE 1 AC2 7 ASP A 73 HIS A 74 ASP A 178 HIS A 221 SITE 2 AC2 7 FE A 401 60P A 403 HOH A 520 SITE 1 AC3 9 ASP A 73 HIS A 159 ASP A 178 PHE A 195 SITE 2 AC3 9 HIS A 221 HIS A 282 FE A 401 FE A 402 SITE 3 AC3 9 HOH A 520 CRYST1 61.144 61.144 146.277 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016355 0.009442 0.000000 0.00000 SCALE2 0.000000 0.018885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006836 0.00000