data_5HIX # _entry.id 5HIX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5HIX pdb_00005hix 10.2210/pdb5hix/pdb WWPDB D_1000217094 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-02 2 'Structure model' 1 1 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_dist_value' 4 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 5 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 12 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5HIX _pdbx_database_status.recvd_initial_deposition_date 2016-01-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mandal, P.K.' 1 'Baptiste, B.' 2 ;Langlois d'Estaintot, B. ; 3 'Kauffmann, B.' 4 'Huc, I.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chembiochem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1439-7633 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 1911 _citation.page_last 1914 _citation.title 'Multivalent Interactions between an Aromatic Helical Foldamer and a DNA G-Quadruplex in the Solid State.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cbic.201600281 _citation.pdbx_database_id_PubMed 27472456 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mandal, P.K.' 1 ? primary 'Baptiste, B.' 2 ? primary ;Langlois d'Estaintot, B. ; 3 ? primary 'Kauffmann, B.' 4 ? primary 'Huc, I.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Dimeric G-quadruplex' 3805.460 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? 3 non-polymer syn ;4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-nitroquinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinoline-2-carboxylic acid ; 1021.043 1 ? ? ? ? 4 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DG)(DG)(DT)(DT)(DT)(DT)(DG)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GGGGTTTTGGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 ;4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-nitroquinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinoline-2-carboxylic acid ; 61Q 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'Oxytricha Nova' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 61Q non-polymer . ;4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-nitroquinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinoline-2-carboxylic acid ; ? 'C52 H52 N12 O11' 1021.043 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DG 12 12 12 DG DG A . n B 1 1 DG 1 1 1 DG DG B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DT 5 5 5 DT DT B . n B 1 6 DT 6 6 6 DT DT B . n B 1 7 DT 7 7 7 DT DT B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DG 9 9 9 DG DG B . n B 1 10 DG 10 10 10 DG DG B . n B 1 11 DG 11 11 11 DG DG B . n B 1 12 DG 12 12 12 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 2 K 1 104 4 K K A . G 3 61Q 1 105 1 61Q UNK A . H 4 HOH 1 201 10 HOH HOH A . H 4 HOH 2 202 4 HOH HOH A . H 4 HOH 3 203 5 HOH HOH A . H 4 HOH 4 204 3 HOH HOH A . H 4 HOH 5 205 9 HOH HOH A . H 4 HOH 6 206 7 HOH HOH A . I 4 HOH 1 101 8 HOH HOH B . I 4 HOH 2 102 1 HOH HOH B . I 4 HOH 3 103 6 HOH HOH B . I 4 HOH 4 104 2 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AMoRE ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5HIX _cell.details ? _cell.formula_units_Z ? _cell.length_a 31.701 _cell.length_a_esd ? _cell.length_b 31.701 _cell.length_b_esd ? _cell.length_c 97.373 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5HIX _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;d(GGGGTTTTGGGG), 8-amino-2-quinolinecarboxylic acid, potassium cacodylate, magnesium chloride, potassium chloride, spermine, 2-methyl-2,4-pentanediol (MPD) ; _exptl_crystal_grow.pdbx_pH_range 7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-11-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9796 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9796 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5HIX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.48 _reflns.d_resolution_low 30.14 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3345 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.72 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.06 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.48 _reflns_shell.d_res_low 2.57 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.95 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 88.62 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.87 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 31.99 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 31.99 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -63.98 _refine.B_iso_max ? _refine.B_iso_mean 56.927 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5HIX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.48 _refine.ls_d_res_low 30.14 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3151 _refine.ls_number_reflns_R_free 157 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.61 _refine.ls_percent_reflns_R_free 4.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.23052 _refine.ls_R_factor_R_free 0.28784 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22694 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1JRN _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.108 _refine.pdbx_overall_ESU_R_Free 0.068 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 18.537 _refine.overall_SU_ML 0.387 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 506 _refine_hist.pdbx_number_atoms_ligand 79 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 595 _refine_hist.d_res_high 2.48 _refine_hist.d_res_low 30.14 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.012 650 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.015 0.021 329 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.668 1.341 994 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 3.560 3.065 772 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 72 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.019 0.021 375 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 127 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.467 5.759 650 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.463 5.768 651 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.296 8.601 995 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 12.651 62.044 1225 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 12.647 62.105 1225 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.481 _refine_ls_shell.d_res_low 2.545 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 6 _refine_ls_shell.number_reflns_R_work 192 _refine_ls_shell.percent_reflns_obs 78.57 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.516 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.309 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5HIX _struct.title 'Cocrystal structure of an anti-parallel DNA G-quadruplex and a tetra-Quinoline Foldamer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5HIX _struct_keywords.text 'DNA G-quadruplex, Foldamer, Foldamer-quadruplex, G-quadruplex Ligands, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5HIX _struct_ref.pdbx_db_accession 5HIX _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5HIX A 1 ? 12 ? 5HIX 1 ? 12 ? 1 12 2 1 5HIX B 1 ? 12 ? 5HIX 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3160 ? 1 MORE -18 ? 1 'SSA (A^2)' 4250 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 F K . K ? ? A DG 1 A K 104 1_555 ? ? ? ? ? ? ? 3.025 ? ? metalc2 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 101 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 F K . K ? ? A DG 2 A K 104 1_555 ? ? ? ? ? ? ? 3.431 ? ? metalc4 metalc ? ? A DG 3 O6 ? ? ? 1_555 E K . K ? ? A DG 3 A K 103 1_555 ? ? ? ? ? ? ? 2.835 ? ? metalc5 metalc ? ? A DG 4 O6 ? ? ? 1_555 D K . K ? ? A DG 4 A K 102 1_555 ? ? ? ? ? ? ? 2.638 ? ? metalc6 metalc ? ? A DG 4 O6 ? ? ? 1_555 E K . K ? ? A DG 4 A K 103 1_555 ? ? ? ? ? ? ? 3.394 ? ? metalc7 metalc ? ? A DT 5 O2 ? ? ? 1_555 D K . K ? ? A DT 5 A K 102 1_555 ? ? ? ? ? ? ? 3.373 ? ? metalc8 metalc ? ? A DT 7 O2 ? ? ? 1_555 D K . K ? ? A DT 7 A K 102 1_555 ? ? ? ? ? ? ? 2.745 ? ? metalc9 metalc ? ? A DG 9 O6 ? ? ? 1_555 D K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 2.904 ? ? metalc10 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 103 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc11 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 101 1_555 ? ? ? ? ? ? ? 3.145 ? ? metalc12 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 103 1_555 ? ? ? ? ? ? ? 2.654 ? ? metalc13 metalc ? ? A DG 11 O6 ? ? ? 1_555 C K . K ? ? A DG 11 A K 101 1_555 ? ? ? ? ? ? ? 2.528 ? ? metalc14 metalc ? ? A DG 11 O6 ? ? ? 1_555 F K . K ? ? A DG 11 A K 104 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc15 metalc ? ? A DG 12 O6 ? ? ? 1_555 F K . K ? ? A DG 12 A K 104 1_555 ? ? ? ? ? ? ? 2.695 ? ? metalc16 metalc ? ? C K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 101 B DG 2 1_555 ? ? ? ? ? ? ? 3.093 ? ? metalc17 metalc ? ? C K . K ? ? ? 1_555 B DG 3 O6 ? ? A K 101 B DG 3 1_555 ? ? ? ? ? ? ? 3.148 ? ? metalc18 metalc ? ? C K . K ? ? ? 1_555 B DG 10 O6 ? ? A K 101 B DG 10 1_555 ? ? ? ? ? ? ? 2.771 ? ? metalc19 metalc ? ? D K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 102 B DG 1 1_555 ? ? ? ? ? ? ? 3.145 ? ? metalc20 metalc ? ? D K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 102 B DG 12 1_555 ? ? ? ? ? ? ? 2.844 ? ? metalc21 metalc ? ? E K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 103 B DG 1 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc22 metalc ? ? E K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 103 B DG 2 1_555 ? ? ? ? ? ? ? 2.963 ? ? metalc23 metalc ? ? E K . K ? ? ? 1_555 B DG 11 O6 ? ? A K 103 B DG 11 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc24 metalc ? ? E K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 103 B DG 12 1_555 ? ? ? ? ? ? ? 3.143 ? ? metalc25 metalc ? ? F K . K ? ? ? 1_555 B DG 3 O6 ? ? A K 104 B DG 3 1_555 ? ? ? ? ? ? ? 3.459 ? ? metalc26 metalc ? ? F K . K ? ? ? 1_555 B DG 4 O6 ? ? A K 104 B DG 4 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc27 metalc ? ? F K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 104 B DG 9 1_555 ? ? ? ? ? ? ? 3.111 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 B DG 4 N2 ? ? A DG 1 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DG 4 N1 ? ? A DG 1 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DG 3 O6 ? ? A DG 2 B DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DG 3 N7 ? ? A DG 2 B DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N7 ? ? ? 1_555 B DG 10 N2 ? ? A DG 2 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DG 10 N1 ? ? A DG 2 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DG 2 N1 ? ? A DG 3 B DG 2 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DT 7 O4 ? ? A DG 4 A DT 7 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DG 1 O6 ? ? A DG 4 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DG 1 N7 ? ? A DG 4 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 N7 ? ? ? 1_555 B DG 12 N2 ? ? A DG 4 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DG 12 N1 ? ? A DG 4 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 9 N7 ? ? ? 1_555 B DG 1 N2 ? ? A DG 9 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DG 1 N1 ? ? A DG 9 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DG 12 O6 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DG 12 N7 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DG 2 O6 ? ? A DG 10 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DG 2 N7 ? ? A DG 10 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 11 N2 ? ? A DG 10 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 11 N1 ? ? A DG 10 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 11 N7 ? ? ? 1_555 B DG 3 N2 ? ? A DG 11 B DG 3 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog22 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 11 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 11 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DG 4 O6 ? ? A DG 12 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DG 4 N7 ? ? A DG 12 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 59.8 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 149.7 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 90.1 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 123.0 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 175.9 ? 6 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 86.9 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 91.3 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 64.8 ? 9 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 71.2 ? 10 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 111.5 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 76.5 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 109.0 ? 13 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 114.3 ? 14 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 69.9 ? 15 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 63.5 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 84.2 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 99.1 ? 18 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 105.3 ? 19 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 84.4 ? 20 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 163.0 ? 21 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 130.5 ? 22 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 129.1 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 121.8 ? 24 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 95.7 ? 25 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 147.8 ? 26 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 66.5 ? 27 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 77.5 ? 28 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 82.4 ? 29 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 143.4 ? 30 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 77.5 ? 31 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 76.9 ? 32 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 94.4 ? 33 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 68.0 ? 34 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 67.1 ? 35 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 117.6 ? 36 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 136.0 ? 37 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 69.1 ? 38 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 167.0 ? 39 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 99.2 ? 40 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 120.2 ? 41 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 154.7 ? 42 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 72.8 ? 43 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 97.5 ? 44 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 81.8 ? 45 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 74.5 ? 46 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 117.5 ? 47 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 77.4 ? 48 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 130.1 ? 49 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 107.9 ? 50 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 74.8 ? 51 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 66.9 ? 52 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 82.1 ? 53 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 94.0 ? 54 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 105.0 ? 55 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 66.1 ? 56 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 175.6 ? 57 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 117.2 ? 58 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 113.5 ? 59 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 58.5 ? 60 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 61.8 ? 61 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 97.5 ? 62 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 111.5 ? 63 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 169.0 ? 64 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 64.9 ? 65 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? A DT 5 ? A DT 5 ? 1_555 82.7 ? 66 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? A DT 7 ? A DT 7 ? 1_555 148.5 ? 67 O2 ? A DT 5 ? A DT 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? A DT 7 ? A DT 7 ? 1_555 85.4 ? 68 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 105.5 ? 69 O2 ? A DT 5 ? A DT 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 155.0 ? 70 O2 ? A DT 7 ? A DT 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 75.4 ? 71 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 83.0 ? 72 O2 ? A DT 5 ? A DT 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 103.1 ? 73 O2 ? A DT 7 ? A DT 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 71.4 ? 74 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 55.9 ? 75 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 71.4 ? 76 O2 ? A DT 5 ? A DT 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 143.1 ? 77 O2 ? A DT 7 ? A DT 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 129.8 ? 78 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 60.5 ? 79 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 99.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 101 ? 9 'binding site for residue K A 101' AC2 Software A K 102 ? 7 'binding site for residue K A 102' AC3 Software A K 103 ? 9 'binding site for residue K A 103' AC4 Software A K 104 ? 9 'binding site for residue K A 104' AC5 Software A 61Q 105 ? 3 'binding site for residue 61Q A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 2 ? DG A 2 . ? 1_555 ? 2 AC1 9 DG A 3 ? DG A 3 . ? 1_555 ? 3 AC1 9 DG A 10 ? DG A 10 . ? 1_555 ? 4 AC1 9 DG A 11 ? DG A 11 . ? 1_555 ? 5 AC1 9 K F . ? K A 104 . ? 1_555 ? 6 AC1 9 DG B 2 ? DG B 2 . ? 1_555 ? 7 AC1 9 DG B 3 ? DG B 3 . ? 1_555 ? 8 AC1 9 DG B 10 ? DG B 10 . ? 1_555 ? 9 AC1 9 DG B 11 ? DG B 11 . ? 1_555 ? 10 AC2 7 DG A 4 ? DG A 4 . ? 1_555 ? 11 AC2 7 DT A 5 ? DT A 5 . ? 1_555 ? 12 AC2 7 DT A 7 ? DT A 7 . ? 1_555 ? 13 AC2 7 DG A 9 ? DG A 9 . ? 1_555 ? 14 AC2 7 K E . ? K A 103 . ? 1_555 ? 15 AC2 7 DG B 1 ? DG B 1 . ? 1_555 ? 16 AC2 7 DG B 12 ? DG B 12 . ? 1_555 ? 17 AC3 9 DG A 3 ? DG A 3 . ? 1_555 ? 18 AC3 9 DG A 4 ? DG A 4 . ? 1_555 ? 19 AC3 9 DG A 9 ? DG A 9 . ? 1_555 ? 20 AC3 9 DG A 10 ? DG A 10 . ? 1_555 ? 21 AC3 9 K D . ? K A 102 . ? 1_555 ? 22 AC3 9 DG B 1 ? DG B 1 . ? 1_555 ? 23 AC3 9 DG B 2 ? DG B 2 . ? 1_555 ? 24 AC3 9 DG B 11 ? DG B 11 . ? 1_555 ? 25 AC3 9 DG B 12 ? DG B 12 . ? 1_555 ? 26 AC4 9 DG A 1 ? DG A 1 . ? 1_555 ? 27 AC4 9 DG A 2 ? DG A 2 . ? 1_555 ? 28 AC4 9 DG A 11 ? DG A 11 . ? 1_555 ? 29 AC4 9 DG A 12 ? DG A 12 . ? 1_555 ? 30 AC4 9 K C . ? K A 101 . ? 1_555 ? 31 AC4 9 DG B 3 ? DG B 3 . ? 1_555 ? 32 AC4 9 DG B 4 ? DG B 4 . ? 1_555 ? 33 AC4 9 DG B 9 ? DG B 9 . ? 1_555 ? 34 AC4 9 DG B 10 ? DG B 10 . ? 1_555 ? 35 AC5 3 DG A 3 ? DG A 3 . ? 1_665 ? 36 AC5 3 DT A 8 ? DT A 8 . ? 1_555 ? 37 AC5 3 HOH H . ? HOH A 204 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? "C1'" A DG 10 ? ? 97.07 102.40 -5.33 0.80 N 2 1 "C3'" A DG 12 ? ? "C2'" A DG 12 ? ? "C1'" A DG 12 ? ? 97.10 102.40 -5.30 0.80 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 61Q NAB N N N 1 61Q CAF C N N 2 61Q CAD C N N 3 61Q CAA C N N 4 61Q OAW O N N 5 61Q CCR C Y N 6 61Q CCQ C Y N 7 61Q CCP C Y N 8 61Q COW C N N 9 61Q OAX O N N 10 61Q OBI O N N 11 61Q NBH N Y N 12 61Q CCO C Y N 13 61Q CCS C Y N 14 61Q CCT C Y N 15 61Q CCU C Y N 16 61Q CCV C Y N 17 61Q CCN C Y N 18 61Q NBG N N N 19 61Q CCM C N N 20 61Q OAV O N N 21 61Q CCF C Y N 22 61Q CCG C Y N 23 61Q CCH C Y N 24 61Q OAU O N N 25 61Q CAH C N N 26 61Q CAK C N N 27 61Q CAL C N N 28 61Q NAE N N N 29 61Q NBF N Y N 30 61Q CCE C Y N 31 61Q CCI C Y N 32 61Q CCJ C Y N 33 61Q CCK C Y N 34 61Q CCL C Y N 35 61Q CCD C Y N 36 61Q NBE N N N 37 61Q CCC C N N 38 61Q OAR O N N 39 61Q CBV C Y N 40 61Q CBW C Y N 41 61Q CBX C Y N 42 61Q OAN O N N 43 61Q CAM C N N 44 61Q CAO C N N 45 61Q CAP C N N 46 61Q NAG N N N 47 61Q NBD N Y N 48 61Q CBU C Y N 49 61Q CBY C Y N 50 61Q CBZ C Y N 51 61Q CCA C Y N 52 61Q CCB C Y N 53 61Q CBT C Y N 54 61Q NBC N N N 55 61Q CBS C N N 56 61Q OAJ O N N 57 61Q CBQ C Y N 58 61Q CBR C Y N 59 61Q NBB N Y N 60 61Q CBP C Y N 61 61Q CBO C Y N 62 61Q NBA N N N 63 61Q OAY O N N 64 61Q OAZ O N N 65 61Q CBN C Y N 66 61Q CBM C Y N 67 61Q CBL C Y N 68 61Q CBK C Y N 69 61Q CBJ C Y N 70 61Q OAC O N N 71 61Q CAQ C N N 72 61Q CAS C N N 73 61Q CAT C N N 74 61Q NAI N N N 75 61Q H1 H N N 76 61Q H2 H N N 77 61Q H4 H N N 78 61Q H5 H N N 79 61Q H6 H N N 80 61Q H7 H N N 81 61Q H8 H N N 82 61Q H9 H N N 83 61Q H10 H N N 84 61Q H11 H N N 85 61Q H12 H N N 86 61Q H13 H N N 87 61Q H14 H N N 88 61Q H15 H N N 89 61Q H16 H N N 90 61Q H17 H N N 91 61Q H18 H N N 92 61Q H19 H N N 93 61Q H20 H N N 94 61Q H21 H N N 95 61Q H22 H N N 96 61Q H23 H N N 97 61Q H24 H N N 98 61Q H26 H N N 99 61Q H27 H N N 100 61Q H28 H N N 101 61Q H29 H N N 102 61Q H30 H N N 103 61Q H31 H N N 104 61Q H32 H N N 105 61Q H33 H N N 106 61Q H34 H N N 107 61Q H35 H N N 108 61Q H36 H N N 109 61Q H37 H N N 110 61Q H38 H N N 111 61Q H40 H N N 112 61Q H41 H N N 113 61Q H42 H N N 114 61Q H43 H N N 115 61Q H44 H N N 116 61Q H45 H N N 117 61Q H46 H N N 118 61Q H47 H N N 119 61Q H48 H N N 120 61Q H49 H N N 121 61Q H50 H N N 122 61Q H51 H N N 123 61Q H52 H N N 124 61Q H53 H N N 125 61Q H54 H N N 126 61Q H55 H N N 127 DG OP3 O N N 128 DG P P N N 129 DG OP1 O N N 130 DG OP2 O N N 131 DG "O5'" O N N 132 DG "C5'" C N N 133 DG "C4'" C N R 134 DG "O4'" O N N 135 DG "C3'" C N S 136 DG "O3'" O N N 137 DG "C2'" C N N 138 DG "C1'" C N R 139 DG N9 N Y N 140 DG C8 C Y N 141 DG N7 N Y N 142 DG C5 C Y N 143 DG C6 C N N 144 DG O6 O N N 145 DG N1 N N N 146 DG C2 C N N 147 DG N2 N N N 148 DG N3 N N N 149 DG C4 C Y N 150 DG HOP3 H N N 151 DG HOP2 H N N 152 DG "H5'" H N N 153 DG "H5''" H N N 154 DG "H4'" H N N 155 DG "H3'" H N N 156 DG "HO3'" H N N 157 DG "H2'" H N N 158 DG "H2''" H N N 159 DG "H1'" H N N 160 DG H8 H N N 161 DG H1 H N N 162 DG H21 H N N 163 DG H22 H N N 164 DT OP3 O N N 165 DT P P N N 166 DT OP1 O N N 167 DT OP2 O N N 168 DT "O5'" O N N 169 DT "C5'" C N N 170 DT "C4'" C N R 171 DT "O4'" O N N 172 DT "C3'" C N S 173 DT "O3'" O N N 174 DT "C2'" C N N 175 DT "C1'" C N R 176 DT N1 N N N 177 DT C2 C N N 178 DT O2 O N N 179 DT N3 N N N 180 DT C4 C N N 181 DT O4 O N N 182 DT C5 C N N 183 DT C7 C N N 184 DT C6 C N N 185 DT HOP3 H N N 186 DT HOP2 H N N 187 DT "H5'" H N N 188 DT "H5''" H N N 189 DT "H4'" H N N 190 DT "H3'" H N N 191 DT "HO3'" H N N 192 DT "H2'" H N N 193 DT "H2''" H N N 194 DT "H1'" H N N 195 DT H3 H N N 196 DT H71 H N N 197 DT H72 H N N 198 DT H73 H N N 199 DT H6 H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 K K K N N 204 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 61Q OAY NBA doub N N 1 61Q NBA OAZ sing N N 2 61Q NBA CBO sing N N 3 61Q CBN CBO doub Y N 4 61Q CBN CBM sing Y N 5 61Q OAN CBX sing N N 6 61Q OAN CAM sing N N 7 61Q CAP NAG sing N N 8 61Q CAP CAO sing N N 9 61Q CBO CBP sing Y N 10 61Q CAO CAM sing N N 11 61Q CCK CCL doub Y N 12 61Q CCK CCJ sing Y N 13 61Q CBM CBL doub Y N 14 61Q CBX CBW doub Y N 15 61Q CBX CBY sing Y N 16 61Q CBZ CBY doub Y N 17 61Q CBZ CCA sing Y N 18 61Q CCL CCD sing Y N 19 61Q CBW CBV sing Y N 20 61Q CBY CBU sing Y N 21 61Q CCA CCB doub Y N 22 61Q CAK CAL sing N N 23 61Q CAK CAH sing N N 24 61Q CBV CCC sing N N 25 61Q CBV NBD doub Y N 26 61Q OAR CCC doub N N 27 61Q CBU NBD sing Y N 28 61Q CBU CBT doub Y N 29 61Q CBP NBB doub Y N 30 61Q CBP CBK sing Y N 31 61Q CCJ CCI doub Y N 32 61Q CCB CBT sing Y N 33 61Q CCC NBE sing N N 34 61Q CBT NBC sing N N 35 61Q CCD NBE sing N N 36 61Q CCD CCE doub Y N 37 61Q NBB CBQ sing Y N 38 61Q CBL CBK sing Y N 39 61Q CAL NAE sing N N 40 61Q NBC CBS sing N N 41 61Q CAH OAU sing N N 42 61Q CBK CBJ doub Y N 43 61Q CCI CCE sing Y N 44 61Q CCI CCH sing Y N 45 61Q CCE NBF sing Y N 46 61Q CBQ CBS sing N N 47 61Q CBQ CBR doub Y N 48 61Q OAU CCH sing N N 49 61Q CBS OAJ doub N N 50 61Q CCH CCG doub Y N 51 61Q CBJ CBR sing Y N 52 61Q CBJ OAC sing N N 53 61Q NBF CCF doub Y N 54 61Q CCG CCF sing Y N 55 61Q OAC CAQ sing N N 56 61Q CCF CCM sing N N 57 61Q OBI COW doub N N 58 61Q OAX COW sing N N 59 61Q COW CCP sing N N 60 61Q NBG CCM sing N N 61 61Q NBG CCN sing N N 62 61Q CCM OAV doub N N 63 61Q CAQ CAS sing N N 64 61Q NBH CCP doub Y N 65 61Q NBH CCO sing Y N 66 61Q CCP CCQ sing Y N 67 61Q CAS CAT sing N N 68 61Q CCN CCO doub Y N 69 61Q CCN CCV sing Y N 70 61Q CCO CCS sing Y N 71 61Q CCQ CCR doub Y N 72 61Q CCV CCU doub Y N 73 61Q CAT NAI sing N N 74 61Q CCS CCR sing Y N 75 61Q CCS CCT doub Y N 76 61Q CCR OAW sing N N 77 61Q CCU CCT sing Y N 78 61Q CAA OAW sing N N 79 61Q CAA CAD sing N N 80 61Q NAB CAF sing N N 81 61Q CAF CAD sing N N 82 61Q NAB H1 sing N N 83 61Q NAB H2 sing N N 84 61Q CAF H4 sing N N 85 61Q CAF H5 sing N N 86 61Q CAD H6 sing N N 87 61Q CAD H7 sing N N 88 61Q CAA H8 sing N N 89 61Q CAA H9 sing N N 90 61Q CCQ H10 sing N N 91 61Q OAX H11 sing N N 92 61Q CCT H12 sing N N 93 61Q CCU H13 sing N N 94 61Q CCV H14 sing N N 95 61Q NBG H15 sing N N 96 61Q CCG H16 sing N N 97 61Q CAH H17 sing N N 98 61Q CAH H18 sing N N 99 61Q CAK H19 sing N N 100 61Q CAK H20 sing N N 101 61Q CAL H21 sing N N 102 61Q CAL H22 sing N N 103 61Q NAE H23 sing N N 104 61Q NAE H24 sing N N 105 61Q CCJ H26 sing N N 106 61Q CCK H27 sing N N 107 61Q CCL H28 sing N N 108 61Q NBE H29 sing N N 109 61Q CBW H30 sing N N 110 61Q CAM H31 sing N N 111 61Q CAM H32 sing N N 112 61Q CAO H33 sing N N 113 61Q CAO H34 sing N N 114 61Q CAP H35 sing N N 115 61Q CAP H36 sing N N 116 61Q NAG H37 sing N N 117 61Q NAG H38 sing N N 118 61Q CBZ H40 sing N N 119 61Q CCA H41 sing N N 120 61Q CCB H42 sing N N 121 61Q NBC H43 sing N N 122 61Q CBR H44 sing N N 123 61Q CBN H45 sing N N 124 61Q CBM H46 sing N N 125 61Q CBL H47 sing N N 126 61Q CAQ H48 sing N N 127 61Q CAQ H49 sing N N 128 61Q CAS H50 sing N N 129 61Q CAS H51 sing N N 130 61Q CAT H52 sing N N 131 61Q CAT H53 sing N N 132 61Q NAI H54 sing N N 133 61Q NAI H55 sing N N 134 DG OP3 P sing N N 135 DG OP3 HOP3 sing N N 136 DG P OP1 doub N N 137 DG P OP2 sing N N 138 DG P "O5'" sing N N 139 DG OP2 HOP2 sing N N 140 DG "O5'" "C5'" sing N N 141 DG "C5'" "C4'" sing N N 142 DG "C5'" "H5'" sing N N 143 DG "C5'" "H5''" sing N N 144 DG "C4'" "O4'" sing N N 145 DG "C4'" "C3'" sing N N 146 DG "C4'" "H4'" sing N N 147 DG "O4'" "C1'" sing N N 148 DG "C3'" "O3'" sing N N 149 DG "C3'" "C2'" sing N N 150 DG "C3'" "H3'" sing N N 151 DG "O3'" "HO3'" sing N N 152 DG "C2'" "C1'" sing N N 153 DG "C2'" "H2'" sing N N 154 DG "C2'" "H2''" sing N N 155 DG "C1'" N9 sing N N 156 DG "C1'" "H1'" sing N N 157 DG N9 C8 sing Y N 158 DG N9 C4 sing Y N 159 DG C8 N7 doub Y N 160 DG C8 H8 sing N N 161 DG N7 C5 sing Y N 162 DG C5 C6 sing N N 163 DG C5 C4 doub Y N 164 DG C6 O6 doub N N 165 DG C6 N1 sing N N 166 DG N1 C2 sing N N 167 DG N1 H1 sing N N 168 DG C2 N2 sing N N 169 DG C2 N3 doub N N 170 DG N2 H21 sing N N 171 DG N2 H22 sing N N 172 DG N3 C4 sing N N 173 DT OP3 P sing N N 174 DT OP3 HOP3 sing N N 175 DT P OP1 doub N N 176 DT P OP2 sing N N 177 DT P "O5'" sing N N 178 DT OP2 HOP2 sing N N 179 DT "O5'" "C5'" sing N N 180 DT "C5'" "C4'" sing N N 181 DT "C5'" "H5'" sing N N 182 DT "C5'" "H5''" sing N N 183 DT "C4'" "O4'" sing N N 184 DT "C4'" "C3'" sing N N 185 DT "C4'" "H4'" sing N N 186 DT "O4'" "C1'" sing N N 187 DT "C3'" "O3'" sing N N 188 DT "C3'" "C2'" sing N N 189 DT "C3'" "H3'" sing N N 190 DT "O3'" "HO3'" sing N N 191 DT "C2'" "C1'" sing N N 192 DT "C2'" "H2'" sing N N 193 DT "C2'" "H2''" sing N N 194 DT "C1'" N1 sing N N 195 DT "C1'" "H1'" sing N N 196 DT N1 C2 sing N N 197 DT N1 C6 sing N N 198 DT C2 O2 doub N N 199 DT C2 N3 sing N N 200 DT N3 C4 sing N N 201 DT N3 H3 sing N N 202 DT C4 O4 doub N N 203 DT C4 C5 sing N N 204 DT C5 C7 sing N N 205 DT C5 C6 doub N N 206 DT C7 H71 sing N N 207 DT C7 H72 sing N N 208 DT C7 H73 sing N N 209 DT C6 H6 sing N N 210 HOH O H1 sing N N 211 HOH O H2 sing N N 212 # _pdbx_audit_support.funding_organization 'European Research Council' _pdbx_audit_support.country France _pdbx_audit_support.grant_number ERC-2012-AdG-320892 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JRN _pdbx_initial_refinement_model.details ? # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.519 2 1 1 ? '-H, K, -L' 0.481 # _atom_sites.entry_id 5HIX _atom_sites.fract_transf_matrix[1][1] 0.031545 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031545 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010270 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P # loop_