HEADER HYDROLASE/HYDROLASE INHIBITOR 13-JAN-16 5HKA TITLE CRYSTAL STRUCTURE OF THE CFTR INHIBITORY FACTOR CIF BOUND TO AN AMIDE TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CFTR INHIBITORY FACTOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14); SOURCE 3 ORGANISM_TAXID: 208963; SOURCE 4 STRAIN: UCBPP-PA14; SOURCE 5 GENE: PA14_26090; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TOP10; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDPM73 KEYWDS BACTERIAL EPOXIDE HYDROLASE, INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.L.HVORECNY,D.R.MADDEN REVDAT 3 27-SEP-23 5HKA 1 JRNL REMARK REVDAT 2 08-JUN-16 5HKA 1 JRNL REVDAT 1 18-MAY-16 5HKA 0 JRNL AUTH S.KITAMURA,K.L.HVORECNY,J.NIU,B.D.HAMMOCK,D.R.MADDEN, JRNL AUTH 2 C.MORISSEAU JRNL TITL RATIONAL DESIGN OF POTENT AND SELECTIVE INHIBITORS OF AN JRNL TITL 2 EPOXIDE HYDROLASE VIRULENCE FACTOR FROM PSEUDOMONAS JRNL TITL 3 AERUGINOSA. JRNL REF J.MED.CHEM. V. 59 4790 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 27120257 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00173 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 75318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9677 - 6.0934 1.00 2723 191 0.1754 0.2026 REMARK 3 2 6.0934 - 4.8595 0.99 2662 190 0.1686 0.1429 REMARK 3 3 4.8595 - 4.2520 0.99 2822 0 0.1223 0.0000 REMARK 3 4 4.2520 - 3.8663 0.99 2645 190 0.1401 0.1549 REMARK 3 5 3.8663 - 3.5909 0.99 2614 191 0.1553 0.1841 REMARK 3 6 3.5909 - 3.3802 0.99 2678 136 0.1567 0.1991 REMARK 3 7 3.3802 - 3.2117 0.99 2755 53 0.1546 0.1805 REMARK 3 8 3.2117 - 3.0724 0.99 2627 190 0.1588 0.2168 REMARK 3 9 3.0724 - 2.9545 0.99 2580 189 0.1754 0.2149 REMARK 3 10 2.9545 - 2.8529 0.99 2800 0 0.1675 0.0000 REMARK 3 11 2.8529 - 2.7639 0.99 2614 190 0.1592 0.1888 REMARK 3 12 2.7639 - 2.6851 0.99 2590 189 0.1491 0.1757 REMARK 3 13 2.6851 - 2.6145 0.99 2578 189 0.1588 0.2188 REMARK 3 14 2.6145 - 2.5509 0.99 2801 0 0.1685 0.0000 REMARK 3 15 2.5509 - 2.4930 0.99 2607 187 0.1750 0.1993 REMARK 3 16 2.4930 - 2.4400 0.99 2601 188 0.1633 0.1976 REMARK 3 17 2.4400 - 2.3913 0.98 2578 188 0.1655 0.2075 REMARK 3 18 2.3913 - 2.3463 0.99 2775 0 0.1743 0.0000 REMARK 3 19 2.3463 - 2.3044 0.98 2581 187 0.1716 0.2296 REMARK 3 20 2.3044 - 2.2654 0.98 2576 188 0.1771 0.2539 REMARK 3 21 2.2654 - 2.2289 0.98 2577 183 0.1687 0.2249 REMARK 3 22 2.2289 - 2.1947 0.98 2764 0 0.1767 0.0000 REMARK 3 23 2.1947 - 2.1624 0.98 2592 186 0.1835 0.2518 REMARK 3 24 2.1624 - 2.1320 0.98 2550 186 0.1855 0.2583 REMARK 3 25 2.1320 - 2.1032 0.98 2563 189 0.1859 0.2268 REMARK 3 26 2.1032 - 2.0759 0.98 2760 0 0.1978 0.0000 REMARK 3 27 2.0759 - 2.0500 0.97 2541 184 0.2005 0.2168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 33.27 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.68540 REMARK 3 B22 (A**2) : -2.31750 REMARK 3 B33 (A**2) : 3.00290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.39620 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9914 REMARK 3 ANGLE : 1.129 13473 REMARK 3 CHIRALITY : 0.076 1367 REMARK 3 PLANARITY : 0.005 1771 REMARK 3 DIHEDRAL : 14.602 3631 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 25:321) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0448 11.6744 27.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.0941 REMARK 3 T33: 0.0812 T12: 0.0109 REMARK 3 T13: 0.0154 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.7711 L22: 1.0027 REMARK 3 L33: 0.9645 L12: 0.1765 REMARK 3 L13: -0.0021 L23: -0.0038 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: -0.0811 S13: -0.0789 REMARK 3 S21: 0.0883 S22: -0.0199 S23: 0.0297 REMARK 3 S31: 0.1180 S32: 0.0016 S33: 0.0487 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 25:317) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0945 50.9938 15.4655 REMARK 3 T TENSOR REMARK 3 T11: 0.0826 T22: 0.0938 REMARK 3 T33: 0.1192 T12: 0.0118 REMARK 3 T13: -0.0226 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.0197 L22: 1.2219 REMARK 3 L33: 0.6266 L12: -0.3592 REMARK 3 L13: -0.1670 L23: -0.0694 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0142 S13: 0.1522 REMARK 3 S21: -0.0316 S22: 0.0160 S23: 0.0347 REMARK 3 S31: -0.0830 S32: -0.0358 S33: -0.0100 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESID 25:317) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6445 44.4982 26.8302 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0924 REMARK 3 T33: 0.1061 T12: 0.0099 REMARK 3 T13: -0.0040 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.6972 L22: 1.2829 REMARK 3 L33: 1.0194 L12: 0.0848 REMARK 3 L13: 0.0746 L23: 0.1661 REMARK 3 S TENSOR REMARK 3 S11: -0.0110 S12: -0.0315 S13: 0.0880 REMARK 3 S21: 0.0733 S22: -0.0279 S23: -0.0828 REMARK 3 S31: -0.1020 S32: 0.0221 S33: 0.0387 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND RESID 25:321) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8356 5.1093 15.5722 REMARK 3 T TENSOR REMARK 3 T11: 0.0889 T22: 0.0991 REMARK 3 T33: 0.0741 T12: 0.0220 REMARK 3 T13: 0.0157 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.8146 L22: 0.9897 REMARK 3 L33: 0.5766 L12: -0.1202 REMARK 3 L13: 0.1212 L23: 0.1698 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.0256 S13: -0.0638 REMARK 3 S21: -0.0522 S22: -0.0051 S23: -0.0867 REMARK 3 S31: 0.0352 S32: 0.0109 S33: -0.0173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HKA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000217150. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JANUARY 10, 2014 REMARK 200 DATA SCALING SOFTWARE : XSCALE JANUARY 10, 2014 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75324 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.7.3_928 REMARK 200 STARTING MODEL: 3KD2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, CALCIUM CHLORIDE, SODIUM REMARK 280 ACETATE, DIMETHYLSULFOXIDE, PH 5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 84.48550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.85550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 84.48550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.85550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 GLY B 318 REMARK 465 ARG B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 HIS B 323 REMARK 465 HIS B 324 REMARK 465 HIS B 325 REMARK 465 GLY C 318 REMARK 465 ARG C 319 REMARK 465 HIS C 320 REMARK 465 HIS C 321 REMARK 465 HIS C 322 REMARK 465 HIS C 323 REMARK 465 HIS C 324 REMARK 465 HIS C 325 REMARK 465 HIS D 322 REMARK 465 HIS D 323 REMARK 465 HIS D 324 REMARK 465 HIS D 325 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 129 -132.77 60.09 REMARK 500 ALA A 154 149.16 -172.24 REMARK 500 ASP B 129 -136.58 62.64 REMARK 500 ALA B 154 142.09 -171.94 REMARK 500 ASP B 184 -159.19 -86.83 REMARK 500 ASP C 129 -131.52 58.90 REMARK 500 ALA C 154 146.65 -175.86 REMARK 500 ASP C 184 -178.42 -68.65 REMARK 500 CYS C 303 51.88 -140.31 REMARK 500 ASP D 129 -136.08 61.60 REMARK 500 ALA D 154 142.60 -174.23 REMARK 500 ARG D 319 120.95 -33.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 64N A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 64N B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 64N C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 64N D 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KD2 RELATED DB: PDB REMARK 900 3KD2 CONTAINS THE SAME PROTEIN IN ITS APO STATE REMARK 900 RELATED ID: 4YX9 RELATED DB: PDB REMARK 900 4YX9 CONTAINS THE SAME PROTEIN COMPLEXED WITH TIRATRICOL REMARK 900 RELATED ID: 5HKB RELATED DB: PDB REMARK 900 RELATED ID: 5HK9 RELATED DB: PDB DBREF1 5HKA A 25 325 UNP A0A0M3KL26_PSEAB DBREF2 5HKA A A0A0M3KL26 1 301 DBREF1 5HKA B 25 325 UNP A0A0M3KL26_PSEAB DBREF2 5HKA B A0A0M3KL26 1 301 DBREF1 5HKA C 25 325 UNP A0A0M3KL26_PSEAB DBREF2 5HKA C A0A0M3KL26 1 301 DBREF1 5HKA D 25 325 UNP A0A0M3KL26_PSEAB DBREF2 5HKA D A0A0M3KL26 1 301 SEQRES 1 A 301 ALA GLU GLU PHE PRO VAL PRO ASN GLY PHE GLU SER ALA SEQRES 2 A 301 TYR ARG GLU VAL ASP GLY VAL LYS LEU HIS TYR VAL LYS SEQRES 3 A 301 GLY GLY GLN GLY PRO LEU VAL MET LEU VAL HIS GLY PHE SEQRES 4 A 301 GLY GLN THR TRP TYR GLU TRP HIS GLN LEU MET PRO GLU SEQRES 5 A 301 LEU ALA LYS ARG PHE THR VAL ILE ALA PRO ASP LEU PRO SEQRES 6 A 301 GLY LEU GLY GLN SER GLU PRO PRO LYS THR GLY TYR SER SEQRES 7 A 301 GLY GLU GLN VAL ALA VAL TYR LEU HIS LYS LEU ALA ARG SEQRES 8 A 301 GLN PHE SER PRO ASP ARG PRO PHE ASP LEU VAL ALA HIS SEQRES 9 A 301 ASP ILE GLY ILE TRP ASN THR TYR PRO MET VAL VAL LYS SEQRES 10 A 301 ASN GLN ALA ASP ILE ALA ARG LEU VAL TYR MET GLU ALA SEQRES 11 A 301 PRO ILE PRO ASP ALA ARG ILE TYR ARG PHE PRO ALA PHE SEQRES 12 A 301 THR ALA GLN GLY GLU SER LEU VAL TRP HIS PHE SER PHE SEQRES 13 A 301 PHE ALA ALA ASP ASP ARG LEU ALA GLU THR LEU ILE ALA SEQRES 14 A 301 GLY LYS GLU ARG PHE PHE LEU GLU HIS PHE ILE LYS SER SEQRES 15 A 301 HIS ALA SER ASN THR GLU VAL PHE SER GLU ARG LEU LEU SEQRES 16 A 301 ASP LEU TYR ALA ARG SER TYR ALA LYS PRO HIS SER LEU SEQRES 17 A 301 ASN ALA SER PHE GLU TYR TYR ARG ALA LEU ASN GLU SER SEQRES 18 A 301 VAL ARG GLN ASN ALA GLU LEU ALA LYS THR ARG LEU GLN SEQRES 19 A 301 MET PRO THR MET THR LEU ALA GLY GLY GLY HIS GLY GLY SEQRES 20 A 301 MET GLY THR PHE GLN LEU GLU GLN MET LYS ALA TYR ALA SEQRES 21 A 301 GLU ASP VAL GLU GLY HIS VAL LEU PRO GLY CYS GLY HIS SEQRES 22 A 301 TRP LEU PRO GLU GLU CYS ALA ALA PRO MET ASN ARG LEU SEQRES 23 A 301 VAL ILE ASP PHE LEU SER ARG GLY ARG HIS HIS HIS HIS SEQRES 24 A 301 HIS HIS SEQRES 1 B 301 ALA GLU GLU PHE PRO VAL PRO ASN GLY PHE GLU SER ALA SEQRES 2 B 301 TYR ARG GLU VAL ASP GLY VAL LYS LEU HIS TYR VAL LYS SEQRES 3 B 301 GLY GLY GLN GLY PRO LEU VAL MET LEU VAL HIS GLY PHE SEQRES 4 B 301 GLY GLN THR TRP TYR GLU TRP HIS GLN LEU MET PRO GLU SEQRES 5 B 301 LEU ALA LYS ARG PHE THR VAL ILE ALA PRO ASP LEU PRO SEQRES 6 B 301 GLY LEU GLY GLN SER GLU PRO PRO LYS THR GLY TYR SER SEQRES 7 B 301 GLY GLU GLN VAL ALA VAL TYR LEU HIS LYS LEU ALA ARG SEQRES 8 B 301 GLN PHE SER PRO ASP ARG PRO PHE ASP LEU VAL ALA HIS SEQRES 9 B 301 ASP ILE GLY ILE TRP ASN THR TYR PRO MET VAL VAL LYS SEQRES 10 B 301 ASN GLN ALA ASP ILE ALA ARG LEU VAL TYR MET GLU ALA SEQRES 11 B 301 PRO ILE PRO ASP ALA ARG ILE TYR ARG PHE PRO ALA PHE SEQRES 12 B 301 THR ALA GLN GLY GLU SER LEU VAL TRP HIS PHE SER PHE SEQRES 13 B 301 PHE ALA ALA ASP ASP ARG LEU ALA GLU THR LEU ILE ALA SEQRES 14 B 301 GLY LYS GLU ARG PHE PHE LEU GLU HIS PHE ILE LYS SER SEQRES 15 B 301 HIS ALA SER ASN THR GLU VAL PHE SER GLU ARG LEU LEU SEQRES 16 B 301 ASP LEU TYR ALA ARG SER TYR ALA LYS PRO HIS SER LEU SEQRES 17 B 301 ASN ALA SER PHE GLU TYR TYR ARG ALA LEU ASN GLU SER SEQRES 18 B 301 VAL ARG GLN ASN ALA GLU LEU ALA LYS THR ARG LEU GLN SEQRES 19 B 301 MET PRO THR MET THR LEU ALA GLY GLY GLY HIS GLY GLY SEQRES 20 B 301 MET GLY THR PHE GLN LEU GLU GLN MET LYS ALA TYR ALA SEQRES 21 B 301 GLU ASP VAL GLU GLY HIS VAL LEU PRO GLY CYS GLY HIS SEQRES 22 B 301 TRP LEU PRO GLU GLU CYS ALA ALA PRO MET ASN ARG LEU SEQRES 23 B 301 VAL ILE ASP PHE LEU SER ARG GLY ARG HIS HIS HIS HIS SEQRES 24 B 301 HIS HIS SEQRES 1 C 301 ALA GLU GLU PHE PRO VAL PRO ASN GLY PHE GLU SER ALA SEQRES 2 C 301 TYR ARG GLU VAL ASP GLY VAL LYS LEU HIS TYR VAL LYS SEQRES 3 C 301 GLY GLY GLN GLY PRO LEU VAL MET LEU VAL HIS GLY PHE SEQRES 4 C 301 GLY GLN THR TRP TYR GLU TRP HIS GLN LEU MET PRO GLU SEQRES 5 C 301 LEU ALA LYS ARG PHE THR VAL ILE ALA PRO ASP LEU PRO SEQRES 6 C 301 GLY LEU GLY GLN SER GLU PRO PRO LYS THR GLY TYR SER SEQRES 7 C 301 GLY GLU GLN VAL ALA VAL TYR LEU HIS LYS LEU ALA ARG SEQRES 8 C 301 GLN PHE SER PRO ASP ARG PRO PHE ASP LEU VAL ALA HIS SEQRES 9 C 301 ASP ILE GLY ILE TRP ASN THR TYR PRO MET VAL VAL LYS SEQRES 10 C 301 ASN GLN ALA ASP ILE ALA ARG LEU VAL TYR MET GLU ALA SEQRES 11 C 301 PRO ILE PRO ASP ALA ARG ILE TYR ARG PHE PRO ALA PHE SEQRES 12 C 301 THR ALA GLN GLY GLU SER LEU VAL TRP HIS PHE SER PHE SEQRES 13 C 301 PHE ALA ALA ASP ASP ARG LEU ALA GLU THR LEU ILE ALA SEQRES 14 C 301 GLY LYS GLU ARG PHE PHE LEU GLU HIS PHE ILE LYS SER SEQRES 15 C 301 HIS ALA SER ASN THR GLU VAL PHE SER GLU ARG LEU LEU SEQRES 16 C 301 ASP LEU TYR ALA ARG SER TYR ALA LYS PRO HIS SER LEU SEQRES 17 C 301 ASN ALA SER PHE GLU TYR TYR ARG ALA LEU ASN GLU SER SEQRES 18 C 301 VAL ARG GLN ASN ALA GLU LEU ALA LYS THR ARG LEU GLN SEQRES 19 C 301 MET PRO THR MET THR LEU ALA GLY GLY GLY HIS GLY GLY SEQRES 20 C 301 MET GLY THR PHE GLN LEU GLU GLN MET LYS ALA TYR ALA SEQRES 21 C 301 GLU ASP VAL GLU GLY HIS VAL LEU PRO GLY CYS GLY HIS SEQRES 22 C 301 TRP LEU PRO GLU GLU CYS ALA ALA PRO MET ASN ARG LEU SEQRES 23 C 301 VAL ILE ASP PHE LEU SER ARG GLY ARG HIS HIS HIS HIS SEQRES 24 C 301 HIS HIS SEQRES 1 D 301 ALA GLU GLU PHE PRO VAL PRO ASN GLY PHE GLU SER ALA SEQRES 2 D 301 TYR ARG GLU VAL ASP GLY VAL LYS LEU HIS TYR VAL LYS SEQRES 3 D 301 GLY GLY GLN GLY PRO LEU VAL MET LEU VAL HIS GLY PHE SEQRES 4 D 301 GLY GLN THR TRP TYR GLU TRP HIS GLN LEU MET PRO GLU SEQRES 5 D 301 LEU ALA LYS ARG PHE THR VAL ILE ALA PRO ASP LEU PRO SEQRES 6 D 301 GLY LEU GLY GLN SER GLU PRO PRO LYS THR GLY TYR SER SEQRES 7 D 301 GLY GLU GLN VAL ALA VAL TYR LEU HIS LYS LEU ALA ARG SEQRES 8 D 301 GLN PHE SER PRO ASP ARG PRO PHE ASP LEU VAL ALA HIS SEQRES 9 D 301 ASP ILE GLY ILE TRP ASN THR TYR PRO MET VAL VAL LYS SEQRES 10 D 301 ASN GLN ALA ASP ILE ALA ARG LEU VAL TYR MET GLU ALA SEQRES 11 D 301 PRO ILE PRO ASP ALA ARG ILE TYR ARG PHE PRO ALA PHE SEQRES 12 D 301 THR ALA GLN GLY GLU SER LEU VAL TRP HIS PHE SER PHE SEQRES 13 D 301 PHE ALA ALA ASP ASP ARG LEU ALA GLU THR LEU ILE ALA SEQRES 14 D 301 GLY LYS GLU ARG PHE PHE LEU GLU HIS PHE ILE LYS SER SEQRES 15 D 301 HIS ALA SER ASN THR GLU VAL PHE SER GLU ARG LEU LEU SEQRES 16 D 301 ASP LEU TYR ALA ARG SER TYR ALA LYS PRO HIS SER LEU SEQRES 17 D 301 ASN ALA SER PHE GLU TYR TYR ARG ALA LEU ASN GLU SER SEQRES 18 D 301 VAL ARG GLN ASN ALA GLU LEU ALA LYS THR ARG LEU GLN SEQRES 19 D 301 MET PRO THR MET THR LEU ALA GLY GLY GLY HIS GLY GLY SEQRES 20 D 301 MET GLY THR PHE GLN LEU GLU GLN MET LYS ALA TYR ALA SEQRES 21 D 301 GLU ASP VAL GLU GLY HIS VAL LEU PRO GLY CYS GLY HIS SEQRES 22 D 301 TRP LEU PRO GLU GLU CYS ALA ALA PRO MET ASN ARG LEU SEQRES 23 D 301 VAL ILE ASP PHE LEU SER ARG GLY ARG HIS HIS HIS HIS SEQRES 24 D 301 HIS HIS HET 64N A 401 30 HET 64N B 401 30 HET 64N C 401 30 HET 64N D 401 30 HETNAM 64N 5'-[2,6-DICHLORO-4-(PROPANOYLAMINO)PHENOXY]-2'- HETNAM 2 64N HYDROXYBIPHENYL-4-CARBOXAMIDE FORMUL 5 64N 4(C22 H18 CL2 N2 O4) FORMUL 9 HOH *753(H2 O) HELIX 1 AA1 THR A 66 HIS A 71 5 6 HELIX 2 AA2 LEU A 73 ALA A 78 1 6 HELIX 3 AA3 SER A 102 SER A 118 1 17 HELIX 4 AA4 ASP A 129 ASN A 134 1 6 HELIX 5 AA5 THR A 135 ASN A 142 1 8 HELIX 6 AA6 ASP A 158 PHE A 164 5 7 HELIX 7 AA7 TRP A 176 ALA A 183 1 8 HELIX 8 AA8 ARG A 186 ALA A 193 1 8 HELIX 9 AA9 LYS A 195 HIS A 207 1 13 HELIX 10 AB1 ASN A 210 PHE A 214 5 5 HELIX 11 AB2 SER A 215 ALA A 227 1 13 HELIX 12 AB3 LYS A 228 ALA A 241 1 14 HELIX 13 AB4 ALA A 241 ALA A 253 1 13 HELIX 14 AB5 THR A 274 ALA A 282 1 9 HELIX 15 AB6 TRP A 298 CYS A 303 1 6 HELIX 16 AB7 CYS A 303 SER A 316 1 14 HELIX 17 AB8 THR B 66 HIS B 71 5 6 HELIX 18 AB9 GLN B 72 ALA B 78 1 7 HELIX 19 AC1 SER B 102 SER B 118 1 17 HELIX 20 AC2 ASP B 129 ASN B 134 1 6 HELIX 21 AC3 THR B 135 ASN B 142 1 8 HELIX 22 AC4 ASP B 158 PHE B 164 5 7 HELIX 23 AC5 TRP B 176 ALA B 183 1 8 HELIX 24 AC6 ARG B 186 ALA B 193 1 8 HELIX 25 AC7 LYS B 195 HIS B 207 1 13 HELIX 26 AC8 ASN B 210 PHE B 214 5 5 HELIX 27 AC9 SER B 215 ALA B 227 1 13 HELIX 28 AD1 LYS B 228 ALA B 241 1 14 HELIX 29 AD2 ALA B 241 ALA B 253 1 13 HELIX 30 AD3 THR B 274 ALA B 284 1 11 HELIX 31 AD4 TRP B 298 CYS B 303 1 6 HELIX 32 AD5 CYS B 303 ARG B 317 1 15 HELIX 33 AD6 THR C 66 HIS C 71 5 6 HELIX 34 AD7 GLN C 72 ALA C 78 1 7 HELIX 35 AD8 SER C 102 SER C 118 1 17 HELIX 36 AD9 ASP C 129 ASN C 134 1 6 HELIX 37 AE1 THR C 135 ASN C 142 1 8 HELIX 38 AE2 ASP C 158 PHE C 164 5 7 HELIX 39 AE3 TRP C 176 ALA C 183 1 8 HELIX 40 AE4 ARG C 186 ALA C 193 1 8 HELIX 41 AE5 LYS C 195 HIS C 207 1 13 HELIX 42 AE6 ASN C 210 PHE C 214 5 5 HELIX 43 AE7 SER C 215 ALA C 227 1 13 HELIX 44 AE8 LYS C 228 ALA C 241 1 14 HELIX 45 AE9 ALA C 241 ALA C 253 1 13 HELIX 46 AF1 THR C 274 ALA C 282 1 9 HELIX 47 AF2 TRP C 298 CYS C 303 1 6 HELIX 48 AF3 CYS C 303 ARG C 317 1 15 HELIX 49 AF4 THR D 66 HIS D 71 5 6 HELIX 50 AF5 LEU D 73 ALA D 78 1 6 HELIX 51 AF6 SER D 102 SER D 118 1 17 HELIX 52 AF7 ASP D 129 ASN D 134 1 6 HELIX 53 AF8 THR D 135 ASN D 142 1 8 HELIX 54 AF9 ASP D 158 PHE D 164 5 7 HELIX 55 AG1 TRP D 176 ALA D 183 1 8 HELIX 56 AG2 ARG D 186 ALA D 193 1 8 HELIX 57 AG3 LYS D 195 HIS D 207 1 13 HELIX 58 AG4 ASN D 210 PHE D 214 5 5 HELIX 59 AG5 SER D 215 ALA D 227 1 13 HELIX 60 AG6 LYS D 228 ALA D 241 1 14 HELIX 61 AG7 ALA D 241 ALA D 253 1 13 HELIX 62 AG8 THR D 274 ALA D 284 1 11 HELIX 63 AG9 TRP D 298 CYS D 303 1 6 HELIX 64 AH1 CYS D 303 ARG D 317 1 15 SHEET 1 AA1 8 GLU A 35 VAL A 41 0 SHEET 2 AA1 8 VAL A 44 GLY A 52 -1 O LYS A 50 N GLU A 35 SHEET 3 AA1 8 THR A 82 PRO A 86 -1 O VAL A 83 N GLY A 51 SHEET 4 AA1 8 LEU A 56 VAL A 60 1 N LEU A 59 O ILE A 84 SHEET 5 AA1 8 PHE A 123 HIS A 128 1 O ASP A 124 N LEU A 56 SHEET 6 AA1 8 ILE A 146 MET A 152 1 O VAL A 150 N LEU A 125 SHEET 7 AA1 8 THR A 261 GLY A 266 1 O MET A 262 N LEU A 149 SHEET 8 AA1 8 VAL A 287 LEU A 292 1 O LEU A 292 N ALA A 265 SHEET 1 AA2 2 PHE A 167 THR A 168 0 SHEET 2 AA2 2 GLY A 171 GLU A 172 -1 O GLY A 171 N THR A 168 SHEET 1 AA3 8 GLU B 35 VAL B 41 0 SHEET 2 AA3 8 VAL B 44 GLY B 52 -1 O LEU B 46 N ARG B 39 SHEET 3 AA3 8 THR B 82 PRO B 86 -1 O VAL B 83 N GLY B 51 SHEET 4 AA3 8 LEU B 56 VAL B 60 1 N LEU B 59 O ILE B 84 SHEET 5 AA3 8 PHE B 123 HIS B 128 1 O VAL B 126 N VAL B 60 SHEET 6 AA3 8 ILE B 146 MET B 152 1 O VAL B 150 N LEU B 125 SHEET 7 AA3 8 THR B 261 GLY B 266 1 O MET B 262 N LEU B 149 SHEET 8 AA3 8 VAL B 287 LEU B 292 1 O LEU B 292 N ALA B 265 SHEET 1 AA4 2 PHE B 167 THR B 168 0 SHEET 2 AA4 2 GLY B 171 GLU B 172 -1 O GLY B 171 N THR B 168 SHEET 1 AA5 8 GLU C 35 VAL C 41 0 SHEET 2 AA5 8 VAL C 44 GLY C 52 -1 O TYR C 48 N ALA C 37 SHEET 3 AA5 8 THR C 82 PRO C 86 -1 O VAL C 83 N GLY C 51 SHEET 4 AA5 8 LEU C 56 VAL C 60 1 N LEU C 59 O ILE C 84 SHEET 5 AA5 8 PHE C 123 HIS C 128 1 O ASP C 124 N LEU C 56 SHEET 6 AA5 8 ILE C 146 MET C 152 1 O VAL C 150 N LEU C 125 SHEET 7 AA5 8 THR C 261 GLY C 266 1 O MET C 262 N TYR C 151 SHEET 8 AA5 8 VAL C 287 LEU C 292 1 O LEU C 292 N ALA C 265 SHEET 1 AA6 2 PHE C 167 THR C 168 0 SHEET 2 AA6 2 GLY C 171 GLU C 172 -1 O GLY C 171 N THR C 168 SHEET 1 AA7 8 GLU D 35 VAL D 41 0 SHEET 2 AA7 8 VAL D 44 GLY D 52 -1 O LEU D 46 N ARG D 39 SHEET 3 AA7 8 THR D 82 PRO D 86 -1 O VAL D 83 N GLY D 51 SHEET 4 AA7 8 LEU D 56 VAL D 60 1 N VAL D 57 O THR D 82 SHEET 5 AA7 8 PHE D 123 HIS D 128 1 O ASP D 124 N LEU D 56 SHEET 6 AA7 8 ILE D 146 MET D 152 1 O VAL D 150 N ALA D 127 SHEET 7 AA7 8 THR D 261 GLY D 266 1 O MET D 262 N LEU D 149 SHEET 8 AA7 8 VAL D 287 LEU D 292 1 O LEU D 292 N ALA D 265 SHEET 1 AA8 2 PHE D 167 THR D 168 0 SHEET 2 AA8 2 GLY D 171 GLU D 172 -1 O GLY D 171 N THR D 168 SSBOND 1 CYS A 295 CYS A 303 1555 1555 2.01 SSBOND 2 CYS B 295 CYS B 303 1555 1555 2.01 SSBOND 3 CYS C 295 CYS C 303 1555 1555 2.01 SSBOND 4 CYS D 295 CYS D 303 1555 1555 2.00 SITE 1 AC1 16 ASP A 129 ILE A 130 TRP A 133 GLU A 153 SITE 2 AC1 16 PHE A 164 PRO A 165 LEU A 174 VAL A 175 SITE 3 AC1 16 HIS A 177 TYR A 239 GLY A 270 GLY A 271 SITE 4 AC1 16 MET A 272 HIS A 297 HOH A 586 HOH A 601 SITE 1 AC2 15 ASP B 129 PHE B 164 LEU B 174 VAL B 175 SITE 2 AC2 15 HIS B 177 PHE B 178 HIS B 207 TYR B 239 SITE 3 AC2 15 GLY B 270 GLY B 271 MET B 272 PHE B 275 SITE 4 AC2 15 HIS B 297 HOH B 612 HOH B 677 SITE 1 AC3 16 GLU A 278 ASP C 129 ILE C 130 TRP C 133 SITE 2 AC3 16 GLU C 153 PHE C 164 LEU C 174 VAL C 175 SITE 3 AC3 16 HIS C 177 TYR C 239 GLY C 270 GLY C 271 SITE 4 AC3 16 MET C 272 PHE C 275 HIS C 297 HOH C 602 SITE 1 AC4 13 ASP D 129 PHE D 164 LEU D 174 VAL D 175 SITE 2 AC4 13 HIS D 177 PHE D 178 HIS D 207 TYR D 239 SITE 3 AC4 13 GLY D 270 GLY D 271 MET D 272 PHE D 275 SITE 4 AC4 13 HIS D 297 CRYST1 168.971 83.711 88.879 90.00 100.68 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005918 0.000000 0.001116 0.00000 SCALE2 0.000000 0.011946 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011449 0.00000