HEADER TOXIN/ANTITOXIN 14-JAN-16 5HKQ TITLE CRYSTAL STRUCTURE OF CDI COMPLEX FROM ESCHERICHIA COLI STEC_O31 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONTACT-DEPENDENT INHIBITOR A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CDIA TOXIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE CDIA TOXIN WAS COEXPRESSED WITH CDII IMMUNITY COMPND 7 PROTEIN WITH THE DUAL PMCSG58 VECTOR. THE CDIA/CDII COMPLEX SAMPLE COMPND 8 WAS TREATED WITH SUBTILISIN, WHICH REMOVED N-TERMINAL FRAGMENT OF THE COMPND 9 CDIA PROTEIN. FOR MATTHEWS COEF. CALCULATIONS ONLY THE VISIBLE COMPND 10 FRAGMENTS OF BOTH, CDIA AND CDII WERE TAKEN INTO ACCOUNT.; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: CDII IMMUNITY PROTEIN; COMPND 13 CHAIN: I; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: STEC_O31; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG58; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 STRAIN: STEC_031; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMCSG58, PMCSG88 KEYWDS TOXIN, ANTITOXIN, STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, MCSG, STRUCTURE-FUNCTION ANALYSIS OF KEYWDS 3 POLYMORPHIC CDI TOXIN-IMMUNITY PROTEIN COMPLEXES, UC4CDI, TOXIN- KEYWDS 4 ANTITOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.MICHALSKA,L.STOLS,W.ESCHENFELDT,C.W.GOULDING,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG),STRUCTURE-FUNCTION ANALYSIS OF AUTHOR 3 POLYMORPHIC CDI TOXIN-IMMUNITY PROTEIN COMPLEXES (UC4CDI) REVDAT 4 04-MAR-20 5HKQ 1 JRNL REVDAT 3 25-DEC-19 5HKQ 1 DBREF REVDAT 2 20-SEP-17 5HKQ 1 REMARK REVDAT 1 18-JAN-17 5HKQ 0 JRNL AUTH K.MICHALSKA,D.QUAN NHAN,J.L.E.WILLETT,L.M.STOLS, JRNL AUTH 2 W.H.ESCHENFELDT,A.M.JONES,J.Y.NGUYEN,S.KOSKINIEMI,D.A.LOW, JRNL AUTH 3 C.W.GOULDING,A.JOACHIMIAK,C.S.HAYES JRNL TITL FUNCTIONAL PLASTICITY OF ANTIBACTERIAL ENDOU TOXINS. JRNL REF MOL.MICROBIOL. V. 109 509 2018 JRNL REFN ESSN 1365-2958 JRNL PMID 29923643 JRNL DOI 10.1111/MMI.14007 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1140 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1630 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2093 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.957 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2176 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2009 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2948 ; 1.487 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4651 ; 0.927 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 6.642 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 111 ;37.906 ;25.586 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;12.091 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;12.025 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 311 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2517 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 496 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1070 ; 0.880 ; 1.655 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1069 ; 0.878 ; 1.653 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1341 ; 1.467 ; 2.472 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1342 ; 1.467 ; 2.475 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1106 ; 1.348 ; 1.803 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1107 ; 1.347 ; 1.805 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1608 ; 2.038 ; 2.651 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2545 ; 5.124 ;14.239 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2546 ; 5.123 ;14.249 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 181 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5726 50.3679 6.1096 REMARK 3 T TENSOR REMARK 3 T11: 0.0782 T22: 0.0240 REMARK 3 T33: 0.0240 T12: -0.0112 REMARK 3 T13: -0.0420 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 4.6980 L22: 2.1778 REMARK 3 L33: 4.2235 L12: 0.3445 REMARK 3 L13: -0.4812 L23: -0.4502 REMARK 3 S TENSOR REMARK 3 S11: -0.1203 S12: 0.2842 S13: -0.0069 REMARK 3 S21: -0.2179 S22: 0.0264 S23: 0.1144 REMARK 3 S31: -0.2071 S32: -0.1517 S33: 0.0939 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): -29.8676 45.2705 11.6028 REMARK 3 T TENSOR REMARK 3 T11: 0.2233 T22: 0.3565 REMARK 3 T33: 0.2724 T12: -0.0835 REMARK 3 T13: -0.0550 T23: 0.0853 REMARK 3 L TENSOR REMARK 3 L11: 10.4025 L22: 5.6237 REMARK 3 L33: 10.1075 L12: 4.4400 REMARK 3 L13: 5.9810 L23: 6.6387 REMARK 3 S TENSOR REMARK 3 S11: -0.1091 S12: -0.0668 S13: -0.2839 REMARK 3 S21: -0.4472 S22: -0.0339 S23: 0.4539 REMARK 3 S31: -0.0401 S32: -0.7436 S33: 0.1429 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 253 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): -8.1544 52.1650 9.3438 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.0095 REMARK 3 T33: 0.0508 T12: -0.0147 REMARK 3 T13: -0.0523 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 6.0129 L22: 6.0534 REMARK 3 L33: 4.4073 L12: 4.1157 REMARK 3 L13: -4.6360 L23: -4.2201 REMARK 3 S TENSOR REMARK 3 S11: 0.2541 S12: 0.0364 S13: 0.3594 REMARK 3 S21: 0.1918 S22: -0.0634 S23: 0.3331 REMARK 3 S31: -0.4975 S32: 0.0215 S33: -0.1907 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 272 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3060 53.2827 -2.5465 REMARK 3 T TENSOR REMARK 3 T11: 0.1298 T22: 0.0987 REMARK 3 T33: 0.1324 T12: -0.0203 REMARK 3 T13: 0.0115 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 6.7835 L22: 9.9803 REMARK 3 L33: 5.2333 L12: -3.4101 REMARK 3 L13: 3.1890 L23: -1.5783 REMARK 3 S TENSOR REMARK 3 S11: 0.3326 S12: 0.0340 S13: 0.3005 REMARK 3 S21: -0.1018 S22: -0.0298 S23: -0.1322 REMARK 3 S31: -0.3093 S32: -0.0281 S33: -0.3028 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 277 A 323 REMARK 3 ORIGIN FOR THE GROUP (A): 3.2914 39.0875 2.5167 REMARK 3 T TENSOR REMARK 3 T11: 0.0220 T22: 0.0814 REMARK 3 T33: 0.0182 T12: -0.0287 REMARK 3 T13: 0.0085 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.7841 L22: 5.2839 REMARK 3 L33: 3.3502 L12: -0.6873 REMARK 3 L13: -1.8705 L23: -0.7957 REMARK 3 S TENSOR REMARK 3 S11: -0.1423 S12: 0.0311 S13: -0.2366 REMARK 3 S21: -0.1313 S22: 0.0031 S23: -0.0648 REMARK 3 S31: 0.1320 S32: 0.1189 S33: 0.1392 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 21 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2454 27.1826 11.0668 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.0954 REMARK 3 T33: 0.1159 T12: 0.0101 REMARK 3 T13: 0.1047 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 10.4401 L22: 3.4830 REMARK 3 L33: 8.0011 L12: 0.6192 REMARK 3 L13: 2.4456 L23: 4.2654 REMARK 3 S TENSOR REMARK 3 S11: -0.2904 S12: 0.0567 S13: -0.5362 REMARK 3 S21: -0.2553 S22: 0.2592 S23: -0.1739 REMARK 3 S31: 0.1722 S32: 0.3819 S33: 0.0312 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 22 I 120 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5007 31.2531 17.1533 REMARK 3 T TENSOR REMARK 3 T11: 0.0354 T22: 0.0355 REMARK 3 T33: 0.0541 T12: -0.0055 REMARK 3 T13: 0.0270 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.6212 L22: 2.5367 REMARK 3 L33: 3.4669 L12: -0.3754 REMARK 3 L13: 1.1269 L23: -0.9607 REMARK 3 S TENSOR REMARK 3 S11: -0.0796 S12: -0.2460 S13: -0.2974 REMARK 3 S21: 0.0025 S22: 0.0237 S23: 0.1405 REMARK 3 S31: 0.2511 S32: -0.1116 S33: 0.0560 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23397 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.83900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS/HCL PH 8.0,10.7% PEG4000, REMARK 280 8.6% PEG3000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.77000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.38500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.07750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.69250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.46250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER I 121 REMARK 465 ALA I 122 REMARK 465 GLY I 123 REMARK 465 HIS I 124 REMARK 465 HIS I 125 REMARK 465 HIS I 126 REMARK 465 HIS I 127 REMARK 465 HIS I 128 REMARK 465 HIS I 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 187 44.42 -151.76 REMARK 500 LEU A 188 -60.71 -92.81 REMARK 500 ASP A 242 -178.83 -63.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-CPX200204 RELATED DB: TARGETTRACK DBREF 5HKQ A 181 323 PDB 5HKQ 5HKQ 181 323 DBREF 5HKQ I 1 129 PDB 5HKQ 5HKQ 1 129 SEQRES 1 A 143 LYS ILE ASN GLN PRO GLU HIS LEU ALA GLN LEU ASP GLY SEQRES 2 A 143 TYR SER GLN LYS LYS GLY ILE SER GLY ALA HIS ASN ALA SEQRES 3 A 143 ASP VAL PHE ASN LYS ALA VAL VAL ASP ASN GLY VAL LYS SEQRES 4 A 143 ILE ILE SER GLU THR PRO THR GLY VAL ARG GLY ILE THR SEQRES 5 A 143 GLN VAL GLN TYR GLU ILE PRO THR LYS ASP ALA ALA GLY SEQRES 6 A 143 ASN THR THR GLY ASN TYR LYS GLY ASN GLY ALA LYS PRO SEQRES 7 A 143 PHE GLU LYS THR ILE TYR ASP PRO LYS ILE PHE THR ASP SEQRES 8 A 143 GLU LYS MSE LEU GLN LEU GLY GLN GLU ALA ALA ALA ILE SEQRES 9 A 143 GLY TYR SER ASN ALA ILE LYS ASN GLY LEU GLN ALA TYR SEQRES 10 A 143 ASP ALA LYS ALA GLY GLY VAL THR PHE ARG VAL TYR ILE SEQRES 11 A 143 ASP GLN LYS THR GLY ILE VAL SER ASN PHE HIS PRO LYS SEQRES 1 I 129 MSE ASN LYS TYR LEU PHE GLU LEU PRO TYR GLU ARG SER SEQRES 2 I 129 GLU PRO GLY TRP THR ILE ARG SER TYR PHE ASP LEU MSE SEQRES 3 I 129 TYR ASN GLU ASN ARG PHE LEU ASP ALA VAL GLU ASN ILE SEQRES 4 I 129 VAL ASN LYS GLU SER TYR ILE LEU ASP GLY ILE TYR CYS SEQRES 5 I 129 ASN PHE PRO ASP MSE ASN SER TYR ASP GLU SER GLU HIS SEQRES 6 I 129 PHE GLU GLY VAL GLU PHE ALA VAL GLY TYR PRO PRO ASP SEQRES 7 I 129 GLU ASP ASP ILE VAL ILE VAL SER GLU GLU THR CYS PHE SEQRES 8 I 129 GLU TYR VAL ARG LEU ALA CYS GLU LYS TYR LEU GLN LEU SEQRES 9 I 129 HIS PRO GLU ASP THR GLU LYS VAL ASN LYS LEU LEU SER SEQRES 10 I 129 LYS ILE PRO SER ALA GLY HIS HIS HIS HIS HIS HIS MODRES 5HKQ MSE A 274 MET MODIFIED RESIDUE MODRES 5HKQ MSE I 1 MET MODIFIED RESIDUE MODRES 5HKQ MSE I 26 MET MODIFIED RESIDUE MODRES 5HKQ MSE I 57 MET MODIFIED RESIDUE HET MSE A 274 8 HET MSE I 1 8 HET MSE I 26 8 HET MSE I 57 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *192(H2 O) HELIX 1 AA1 ASN A 205 ASN A 216 1 12 HELIX 2 AA2 THR A 270 GLY A 293 1 24 HELIX 3 AA3 PRO I 15 GLU I 29 1 15 HELIX 4 AA4 ARG I 31 ASN I 41 1 11 HELIX 5 AA5 ASP I 61 HIS I 65 5 5 HELIX 6 AA6 ASP I 78 ASP I 80 5 3 HELIX 7 AA7 SER I 86 HIS I 105 1 20 HELIX 8 AA8 ASP I 108 SER I 117 1 10 SHEET 1 AA1 2 LEU A 191 SER A 195 0 SHEET 2 AA1 2 GLY A 199 GLY A 202 -1 O SER A 201 N ASP A 192 SHEET 1 AA2 3 LYS A 219 PRO A 225 0 SHEET 2 AA2 3 ILE A 231 LYS A 241 -1 O GLN A 233 N THR A 224 SHEET 3 AA2 3 THR A 247 LYS A 252 -1 O LYS A 252 N ILE A 238 SHEET 1 AA3 3 LYS A 219 PRO A 225 0 SHEET 2 AA3 3 ILE A 231 LYS A 241 -1 O GLN A 233 N THR A 224 SHEET 3 AA3 3 PHE A 259 TYR A 264 -1 O ILE A 263 N THR A 232 SHEET 1 AA4 3 ALA A 296 ALA A 301 0 SHEET 2 AA4 3 VAL A 304 ASP A 311 -1 O PHE A 306 N ALA A 299 SHEET 3 AA4 3 ILE A 316 PRO A 322 -1 O HIS A 321 N ARG A 307 SHEET 1 AA5 4 TYR I 45 LEU I 47 0 SHEET 2 AA5 4 ILE I 50 ASN I 53 -1 O ILE I 50 N LEU I 47 SHEET 3 AA5 4 VAL I 69 VAL I 73 -1 O ALA I 72 N TYR I 51 SHEET 4 AA5 4 ILE I 82 VAL I 85 -1 O VAL I 83 N PHE I 71 LINK C LYS A 273 N MSE A 274 1555 1555 1.33 LINK C MSE A 274 N LEU A 275 1555 1555 1.33 LINK C MSE I 1 N ASN I 2 1555 1555 1.32 LINK C LEU I 25 N MSE I 26 1555 1555 1.33 LINK C MSE I 26 N TYR I 27 1555 1555 1.34 LINK C ASP I 56 N MSE I 57 1555 1555 1.33 LINK C MSE I 57 N ASN I 58 1555 1555 1.33 CISPEP 1 LEU I 8 PRO I 9 0 -2.94 CISPEP 2 GLU I 14 PRO I 15 0 0.80 CISPEP 3 TYR I 75 PRO I 76 0 4.65 CRYST1 89.431 89.431 76.155 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011182 0.006456 0.000000 0.00000 SCALE2 0.000000 0.012912 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013131 0.00000