HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-JAN-16 5HLP TITLE X-RAY CRYSTAL STRUCTURE OF GSK3B IN COMPLEX WITH BRD3937 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GSK-3 BETA,SERINE/THREONINE-PROTEIN KINASE GSK3B; COMPND 5 EC: 2.7.11.26,2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACG2T BACULOGOLD KEYWDS PROTEIN KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.WHITE,D.LAKSHMINARASIMHAN,A.NADUPALLI,R.K.SUTO REVDAT 2 27-JUL-16 5HLP 1 JRNL REVDAT 1 25-MAY-16 5HLP 0 JRNL AUTH F.F.WAGNER,J.A.BISHOP,J.P.GALE,X.SHI,M.WALK,J.KETTERMAN, JRNL AUTH 2 D.PATNAIK,D.BARKER,D.WALPITA,A.J.CAMPBELL,S.NGUYEN,M.LEWIS, JRNL AUTH 3 L.ROSS,M.WEIWER,W.F.AN,A.R.GERMAIN,P.P.NAG,S.METKAR,T.KAYA, JRNL AUTH 4 S.DANDAPANI,D.E.OLSON,A.L.BARBE,F.LAZZARO,J.R.SACHER, JRNL AUTH 5 J.H.CHEAH,D.FEI,J.PEREZ,B.MUNOZ,M.PALMER,K.STEGMAIER, JRNL AUTH 6 S.L.SCHREIBER,E.SCOLNICK,Y.L.ZHANG,S.J.HAGGARTY,E.B.HOLSON, JRNL AUTH 7 J.Q.PAN JRNL TITL INHIBITORS OF GLYCOGEN SYNTHASE KINASE 3 WITH EXQUISITE JRNL TITL 2 KINOME-WIDE SELECTIVITY AND THEIR FUNCTIONAL EFFECTS. JRNL REF ACS CHEM.BIOL. V. 11 1952 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 27128528 JRNL DOI 10.1021/ACSCHEMBIO.6B00306 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 36014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1912 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.50 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2586 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 139 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5320 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 104 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.47000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : 0.32000 REMARK 3 B12 (A**2) : -0.43000 REMARK 3 B13 (A**2) : 0.28000 REMARK 3 B23 (A**2) : 0.27000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.298 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.239 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.506 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5525 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5247 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7559 ; 1.859 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12054 ; 1.036 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 678 ; 7.178 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 231 ;35.510 ;23.203 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 865 ;16.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;24.412 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 860 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6168 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1251 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2706 ; 4.362 ; 5.318 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2705 ; 4.359 ; 5.317 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3374 ; 6.491 ; 7.962 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5HLP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37928 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 36.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (W/V) PEG 5000 MME, 50 MM CITRIC REMARK 280 ACID AND 50 MM BIS-TRIS PROPANE, PH 5.0, 5 MM TCEP, PH 6.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 ARG A 4 REMARK 465 PRO A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 GLU A 12 REMARK 465 SER A 13 REMARK 465 CYS A 14 REMARK 465 LYS A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 PHE A 23 REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 MET A 26 REMARK 465 LYS A 27 REMARK 465 VAL A 28 REMARK 465 SER A 29 REMARK 465 ARG A 30 REMARK 465 ASP A 31 REMARK 465 LYS A 32 REMARK 465 ASP A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 GLY A 120 REMARK 465 GLU A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 ASP A 124 REMARK 465 TYR A 288 REMARK 465 THR A 289 REMARK 465 GLU A 290 REMARK 465 ARG A 383 REMARK 465 ILE A 384 REMARK 465 GLN A 385 REMARK 465 ALA A 386 REMARK 465 ALA A 387 REMARK 465 ALA A 388 REMARK 465 SER A 389 REMARK 465 THR A 390 REMARK 465 PRO A 391 REMARK 465 THR A 392 REMARK 465 ASN A 393 REMARK 465 ALA A 394 REMARK 465 THR A 395 REMARK 465 ALA A 396 REMARK 465 ALA A 397 REMARK 465 SER A 398 REMARK 465 ASP A 399 REMARK 465 ALA A 400 REMARK 465 ASN A 401 REMARK 465 THR A 402 REMARK 465 GLY A 403 REMARK 465 ASP A 404 REMARK 465 ARG A 405 REMARK 465 GLY A 406 REMARK 465 GLN A 407 REMARK 465 THR A 408 REMARK 465 ASN A 409 REMARK 465 ASN A 410 REMARK 465 ALA A 411 REMARK 465 ALA A 412 REMARK 465 SER A 413 REMARK 465 ALA A 414 REMARK 465 SER A 415 REMARK 465 ALA A 416 REMARK 465 SER A 417 REMARK 465 ASN A 418 REMARK 465 SER A 419 REMARK 465 THR A 420 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 ARG B 4 REMARK 465 PRO B 5 REMARK 465 ARG B 6 REMARK 465 THR B 7 REMARK 465 THR B 8 REMARK 465 SER B 9 REMARK 465 PHE B 10 REMARK 465 ALA B 11 REMARK 465 GLU B 12 REMARK 465 SER B 13 REMARK 465 CYS B 14 REMARK 465 LYS B 15 REMARK 465 PRO B 16 REMARK 465 VAL B 17 REMARK 465 GLN B 18 REMARK 465 GLN B 19 REMARK 465 PRO B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 PHE B 23 REMARK 465 GLY B 24 REMARK 465 SER B 25 REMARK 465 MET B 26 REMARK 465 LYS B 27 REMARK 465 VAL B 28 REMARK 465 SER B 29 REMARK 465 ARG B 30 REMARK 465 ASP B 31 REMARK 465 LYS B 32 REMARK 465 ASP B 33 REMARK 465 GLY B 34 REMARK 465 SER B 35 REMARK 465 GLY B 120 REMARK 465 GLU B 121 REMARK 465 LYS B 122 REMARK 465 LYS B 123 REMARK 465 ASP B 124 REMARK 465 TYR B 288 REMARK 465 THR B 289 REMARK 465 GLU B 290 REMARK 465 PHE B 291 REMARK 465 LYS B 292 REMARK 465 PHE B 293 REMARK 465 ILE B 384 REMARK 465 GLN B 385 REMARK 465 ALA B 386 REMARK 465 ALA B 387 REMARK 465 ALA B 388 REMARK 465 SER B 389 REMARK 465 THR B 390 REMARK 465 PRO B 391 REMARK 465 THR B 392 REMARK 465 ASN B 393 REMARK 465 ALA B 394 REMARK 465 THR B 395 REMARK 465 ALA B 396 REMARK 465 ALA B 397 REMARK 465 SER B 398 REMARK 465 ASP B 399 REMARK 465 ALA B 400 REMARK 465 ASN B 401 REMARK 465 THR B 402 REMARK 465 GLY B 403 REMARK 465 ASP B 404 REMARK 465 ARG B 405 REMARK 465 GLY B 406 REMARK 465 GLN B 407 REMARK 465 THR B 408 REMARK 465 ASN B 409 REMARK 465 ASN B 410 REMARK 465 ALA B 411 REMARK 465 ALA B 412 REMARK 465 SER B 413 REMARK 465 ALA B 414 REMARK 465 SER B 415 REMARK 465 ALA B 416 REMARK 465 SER B 417 REMARK 465 ASN B 418 REMARK 465 SER B 419 REMARK 465 THR B 420 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 90 CG OD1 OD2 REMARK 470 PHE A 93 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 ARG A 209 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LYS A 297 CG CD CE NZ REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 ARG A 308 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 46 CG CD OE1 NE2 REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 LYS B 150 CG CD CE NZ REMARK 470 TPO B 277 P O1P O2P O3P REMARK 470 LYS B 297 CG CD CE NZ REMARK 470 LYS B 303 CG CD CE NZ REMARK 470 ARG B 306 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 308 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 141 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 141 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 220 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 220 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 344 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 344 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 50 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 220 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 220 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 83.99 -64.40 REMARK 500 LYS A 60 119.51 -161.53 REMARK 500 ARG A 92 12.91 -68.02 REMARK 500 PHE A 93 133.09 -171.72 REMARK 500 ASP A 181 37.36 -157.79 REMARK 500 ASP A 200 78.77 62.45 REMARK 500 ARG A 209 118.75 -33.84 REMARK 500 CYS A 218 146.23 71.02 REMARK 500 CYS A 218 147.80 67.66 REMARK 500 ARG A 306 142.59 -39.28 REMARK 500 ARG A 308 35.63 -91.21 REMARK 500 LEU A 321 67.73 -101.15 REMARK 500 PRO A 357 -179.00 -66.68 REMARK 500 ASN A 370 75.73 -157.75 REMARK 500 ASP B 49 88.38 -58.18 REMARK 500 ASP B 58 48.79 71.06 REMARK 500 LYS B 91 -57.57 57.79 REMARK 500 ARG B 92 -9.82 -35.75 REMARK 500 HIS B 106 143.79 -171.45 REMARK 500 LYS B 150 -18.87 62.39 REMARK 500 ASP B 181 39.11 -150.78 REMARK 500 ASP B 200 78.12 57.79 REMARK 500 ARG B 209 126.84 -35.25 REMARK 500 CYS B 218 149.52 72.15 REMARK 500 CYS B 218 149.47 72.28 REMARK 500 PHE B 229 -1.37 -58.67 REMARK 500 ASN B 370 65.81 -164.40 REMARK 500 HIS B 381 -6.60 -58.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 92 PHE B 93 149.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 65A A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 65A B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HLN RELATED DB: PDB DBREF 5HLP A 1 420 UNP P49841 GSK3B_HUMAN 1 420 DBREF 5HLP B 1 420 UNP P49841 GSK3B_HUMAN 1 420 SEQADV 5HLP GLY A -3 UNP P49841 EXPRESSION TAG SEQADV 5HLP SER A -2 UNP P49841 EXPRESSION TAG SEQADV 5HLP PRO A -1 UNP P49841 EXPRESSION TAG SEQADV 5HLP GLY A 0 UNP P49841 EXPRESSION TAG SEQADV 5HLP GLY B -3 UNP P49841 EXPRESSION TAG SEQADV 5HLP SER B -2 UNP P49841 EXPRESSION TAG SEQADV 5HLP PRO B -1 UNP P49841 EXPRESSION TAG SEQADV 5HLP GLY B 0 UNP P49841 EXPRESSION TAG SEQRES 1 A 424 GLY SER PRO GLY MET SER GLY ARG PRO ARG THR THR SER SEQRES 2 A 424 PHE ALA GLU SER CYS LYS PRO VAL GLN GLN PRO SER ALA SEQRES 3 A 424 PHE GLY SER MET LYS VAL SER ARG ASP LYS ASP GLY SER SEQRES 4 A 424 LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN GLY PRO SEQRES 5 A 424 ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR LYS VAL SEQRES 6 A 424 ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN ALA LYS SEQRES 7 A 424 LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS LYS VAL SEQRES 8 A 424 LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN ILE SEQRES 9 A 424 MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU ARG SEQRES 10 A 424 TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP GLU VAL SEQRES 11 A 424 TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU THR VAL SEQRES 12 A 424 TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS GLN THR SEQRES 13 A 424 LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR GLN LEU SEQRES 14 A 424 PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY ILE CYS SEQRES 15 A 424 HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP PRO SEQRES 16 A 424 ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SER ALA SEQRES 17 A 424 LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER PTR ILE SEQRES 18 A 424 CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE GLY SEQRES 19 A 424 ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SER ALA SEQRES 20 A 424 GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO ILE SEQRES 21 A 424 PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL GLU ILE SEQRES 22 A 424 ILE LYS VAL LEU GLY THR PRO TPO ARG GLU GLN ILE ARG SEQRES 23 A 424 GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE PRO GLN SEQRES 24 A 424 ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG PRO ARG SEQRES 25 A 424 THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG LEU LEU SEQRES 26 A 424 GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU GLU ALA SEQRES 27 A 424 CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP PRO ASN SEQRES 28 A 424 VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA LEU PHE SEQRES 29 A 424 ASN PHE THR THR GLN GLU LEU SER SER ASN PRO PRO LEU SEQRES 30 A 424 ALA THR ILE LEU ILE PRO PRO HIS ALA ARG ILE GLN ALA SEQRES 31 A 424 ALA ALA SER THR PRO THR ASN ALA THR ALA ALA SER ASP SEQRES 32 A 424 ALA ASN THR GLY ASP ARG GLY GLN THR ASN ASN ALA ALA SEQRES 33 A 424 SER ALA SER ALA SER ASN SER THR SEQRES 1 B 424 GLY SER PRO GLY MET SER GLY ARG PRO ARG THR THR SER SEQRES 2 B 424 PHE ALA GLU SER CYS LYS PRO VAL GLN GLN PRO SER ALA SEQRES 3 B 424 PHE GLY SER MET LYS VAL SER ARG ASP LYS ASP GLY SER SEQRES 4 B 424 LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN GLY PRO SEQRES 5 B 424 ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR LYS VAL SEQRES 6 B 424 ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN ALA LYS SEQRES 7 B 424 LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS LYS VAL SEQRES 8 B 424 LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN ILE SEQRES 9 B 424 MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU ARG SEQRES 10 B 424 TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP GLU VAL SEQRES 11 B 424 TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU THR VAL SEQRES 12 B 424 TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS GLN THR SEQRES 13 B 424 LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR GLN LEU SEQRES 14 B 424 PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY ILE CYS SEQRES 15 B 424 HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP PRO SEQRES 16 B 424 ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SER ALA SEQRES 17 B 424 LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER PTR ILE SEQRES 18 B 424 CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE GLY SEQRES 19 B 424 ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SER ALA SEQRES 20 B 424 GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO ILE SEQRES 21 B 424 PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL GLU ILE SEQRES 22 B 424 ILE LYS VAL LEU GLY THR PRO TPO ARG GLU GLN ILE ARG SEQRES 23 B 424 GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE PRO GLN SEQRES 24 B 424 ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG PRO ARG SEQRES 25 B 424 THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG LEU LEU SEQRES 26 B 424 GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU GLU ALA SEQRES 27 B 424 CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP PRO ASN SEQRES 28 B 424 VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA LEU PHE SEQRES 29 B 424 ASN PHE THR THR GLN GLU LEU SER SER ASN PRO PRO LEU SEQRES 30 B 424 ALA THR ILE LEU ILE PRO PRO HIS ALA ARG ILE GLN ALA SEQRES 31 B 424 ALA ALA SER THR PRO THR ASN ALA THR ALA ALA SER ASP SEQRES 32 B 424 ALA ASN THR GLY ASP ARG GLY GLN THR ASN ASN ALA ALA SEQRES 33 B 424 SER ALA SER ALA SER ASN SER THR MODRES 5HLP PTR A 216 TYR MODIFIED RESIDUE MODRES 5HLP TPO A 277 THR MODIFIED RESIDUE MODRES 5HLP PTR B 216 TYR MODIFIED RESIDUE MODRES 5HLP TPO B 277 THR MODIFIED RESIDUE HET PTR A 216 16 HET TPO A 277 11 HET PTR B 216 16 HET TPO B 277 7 HET 65A A 501 25 HET 65A B 501 25 HETNAM PTR O-PHOSPHOTYROSINE HETNAM TPO PHOSPHOTHREONINE HETNAM 65A 4-(2-METHOXYPHENYL)-3,7,7-TRIMETHYL-1,6,7,8-TETRAHYDRO- HETNAM 2 65A 5H-PYRAZOLO[3,4-B]QUINOLIN-5-ONE HETSYN PTR PHOSPHONOTYROSINE HETSYN TPO PHOSPHONOTHREONINE HETSYN 65A BRD3937 FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 3 65A 2(C20 H21 N3 O2) FORMUL 5 HOH *104(H2 O) HELIX 1 AA1 ASN A 95 LEU A 104 1 10 HELIX 2 AA2 VAL A 139 ALA A 149 1 11 HELIX 3 AA3 PRO A 154 SER A 174 1 21 HELIX 4 AA4 LYS A 183 GLN A 185 5 3 HELIX 5 AA5 SER A 219 ARG A 223 5 5 HELIX 6 AA6 ALA A 224 PHE A 229 1 6 HELIX 7 AA7 SER A 236 GLY A 253 1 18 HELIX 8 AA8 VAL A 263 GLY A 274 1 12 HELIX 9 AA9 TPO A 277 ASN A 285 1 9 HELIX 10 AB1 PRO A 300 PHE A 305 1 6 HELIX 11 AB2 PRO A 310 LEU A 321 1 12 HELIX 12 AB3 THR A 324 ARG A 328 5 5 HELIX 13 AB4 THR A 330 ALA A 336 1 7 HELIX 14 AB5 HIS A 337 ASP A 345 5 9 HELIX 15 AB6 THR A 363 SER A 368 1 6 HELIX 16 AB7 ASN A 370 PRO A 372 5 3 HELIX 17 AB8 LEU A 373 ILE A 378 1 6 HELIX 18 AB9 ASN B 95 LEU B 104 1 10 HELIX 19 AC1 VAL B 139 ALA B 149 1 11 HELIX 20 AC2 PRO B 154 PHE B 175 1 22 HELIX 21 AC3 LYS B 183 GLN B 185 5 3 HELIX 22 AC4 ASP B 200 ALA B 204 5 5 HELIX 23 AC5 SER B 219 ARG B 223 5 5 HELIX 24 AC6 ALA B 224 PHE B 229 1 6 HELIX 25 AC7 SER B 236 GLY B 253 1 18 HELIX 26 AC8 VAL B 263 GLY B 274 1 12 HELIX 27 AC9 TPO B 277 ASN B 285 1 9 HELIX 28 AD1 PRO B 300 PHE B 305 1 6 HELIX 29 AD2 PRO B 310 LEU B 321 1 12 HELIX 30 AD3 THR B 324 ARG B 328 5 5 HELIX 31 AD4 THR B 330 ALA B 336 1 7 HELIX 32 AD5 HIS B 337 ASP B 345 5 9 HELIX 33 AD6 ASN B 370 PRO B 372 5 3 HELIX 34 AD7 LEU B 373 ILE B 378 1 6 HELIX 35 AD8 PRO B 379 ARG B 383 5 5 SHEET 1 AA1 7 THR A 38 PRO A 44 0 SHEET 2 AA1 7 GLN A 52 GLY A 65 -1 O VAL A 54 N VAL A 40 SHEET 3 AA1 7 GLY A 68 LEU A 75 -1 O LYS A 74 N THR A 57 SHEET 4 AA1 7 LEU A 81 GLN A 89 -1 O LYS A 86 N VAL A 69 SHEET 5 AA1 7 VAL A 126 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 AA1 7 LEU A 112 SER A 118 -1 N TYR A 114 O VAL A 131 SHEET 7 AA1 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 AA2 3 GLU A 137 THR A 138 0 SHEET 2 AA2 3 LEU A 187 ASP A 190 -1 O LEU A 189 N GLU A 137 SHEET 3 AA2 3 VAL A 195 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 AA3 2 ILE A 177 CYS A 178 0 SHEET 2 AA3 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 SHEET 1 AA4 7 THR B 38 PRO B 44 0 SHEET 2 AA4 7 GLN B 52 ASN B 64 -1 O VAL B 54 N VAL B 40 SHEET 3 AA4 7 GLY B 68 LEU B 75 -1 O LYS B 74 N THR B 57 SHEET 4 AA4 7 LEU B 81 LEU B 88 -1 O VAL B 82 N ALA B 73 SHEET 5 AA4 7 TYR B 127 ASP B 133 -1 O LEU B 132 N ALA B 83 SHEET 6 AA4 7 LEU B 112 SER B 118 -1 N ARG B 113 O VAL B 131 SHEET 7 AA4 7 THR B 38 PRO B 44 -1 N THR B 43 O PHE B 115 SHEET 1 AA5 3 GLU B 137 THR B 138 0 SHEET 2 AA5 3 LEU B 187 ASP B 190 -1 O LEU B 189 N GLU B 137 SHEET 3 AA5 3 VAL B 195 LEU B 198 -1 O LYS B 197 N LEU B 188 SHEET 1 AA6 2 ILE B 177 CYS B 178 0 SHEET 2 AA6 2 LYS B 205 GLN B 206 -1 O LYS B 205 N CYS B 178 LINK C SER A 215 N PTR A 216 1555 1555 1.35 LINK C PTR A 216 N ILE A 217 1555 1555 1.34 LINK C PRO A 276 N TPO A 277 1555 1555 1.37 LINK C TPO A 277 N ARG A 278 1555 1555 1.33 LINK C SER B 215 N PTR B 216 1555 1555 1.34 LINK C PTR B 216 N ILE B 217 1555 1555 1.33 LINK C PRO B 276 N TPO B 277 1555 1555 1.34 LINK C TPO B 277 N ARG B 278 1555 1555 1.32 SITE 1 AC1 10 ALA A 83 ASP A 133 TYR A 134 VAL A 135 SITE 2 AC1 10 GLN A 185 ASN A 186 LEU A 188 CYS A 199 SITE 3 AC1 10 HOH A 625 HOH A 630 SITE 1 AC2 9 ALA B 83 ASP B 133 TYR B 134 VAL B 135 SITE 2 AC2 9 GLN B 185 ASN B 186 LEU B 188 CYS B 199 SITE 3 AC2 9 HOH B 603 CRYST1 65.048 67.667 67.770 79.67 76.66 88.92 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015373 -0.000291 -0.003654 0.00000 SCALE2 0.000000 0.014781 -0.002702 0.00000 SCALE3 0.000000 0.000000 0.015417 0.00000