data_5HM9 # _entry.id 5HM9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5HM9 pdb_00005hm9 10.2210/pdb5hm9/pdb WWPDB D_1000217310 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-23 2 'Structure model' 1 1 2016-03-30 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2023-09-27 6 'Structure model' 1 5 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Author supporting evidence' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_struct_oper_list 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 6 'Structure model' pdbx_entry_details # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 4 'Structure model' '_pdbx_audit_support.funding_organization' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5HM9 _pdbx_database_status.recvd_initial_deposition_date 2016-01-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5HMA _pdbx_database_related.db_name PDB _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hershey, D.M.' 1 'Ren, X.' 2 'Hurley, J.H.' 3 'Komeili, A.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-7885 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first e1002402 _citation.page_last e1002402 _citation.title ;MamO Is a Repurposed Serine Protease that Promotes Magnetite Biomineralization through Direct Transition Metal Binding in Magnetotactic Bacteria. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pbio.1002402 _citation.pdbx_database_id_PubMed 26981620 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hershey, D.M.' 1 ? primary 'Ren, X.' 2 ? primary 'Melnyk, R.A.' 3 ? primary 'Browne, P.J.' 4 ? primary 'Ozyamak, E.' 5 ? primary 'Jones, S.R.' 6 ? primary 'Chang, M.C.' 7 ? primary 'Hurley, J.H.' 8 ? primary 'Komeili, A.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MamO protease domain' 19494.283 1 ? ? ? ? 2 polymer man 'poly(UNK)' 443.539 1 ? ? ? 'Unidentified peptide' 3 water nat water 18.015 18 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;LYHTVPPAVVGVGGGGVNAGPVASGAIVGTNGYVITTLHSVSKLPEISVQVATTGGIRRFPAQVVKTIPGHDLALLKMQT TEKFLHFRMADVQTVVPGQQVFAFGRNMAGAPLVRQGLVQSADAPLAVGATQITHLLRSDAVYSWEQTGGPLVNAQGDLV GINIAATGPTGKVEGFTVPAQVIVSHLQD ; ;LYHTVPPAVVGVGGGGVNAGPVASGAIVGTNGYVITTLHSVSKLPEISVQVATTGGIRRFPAQVVKTIPGHDLALLKMQT TEKFLHFRMADVQTVVPGQQVFAFGRNMAGAPLVRQGLVQSADAPLAVGATQITHLLRSDAVYSWEQTGGPLVNAQGDLV GINIAATGPTGKVEGFTVPAQVIVSHLQD ; A ? 2 'polypeptide(L)' no no '(UNK)(UNK)(UNK)(UNK)(UNK)' XXXXX C ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 TYR n 1 3 HIS n 1 4 THR n 1 5 VAL n 1 6 PRO n 1 7 PRO n 1 8 ALA n 1 9 VAL n 1 10 VAL n 1 11 GLY n 1 12 VAL n 1 13 GLY n 1 14 GLY n 1 15 GLY n 1 16 GLY n 1 17 VAL n 1 18 ASN n 1 19 ALA n 1 20 GLY n 1 21 PRO n 1 22 VAL n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 ALA n 1 27 ILE n 1 28 VAL n 1 29 GLY n 1 30 THR n 1 31 ASN n 1 32 GLY n 1 33 TYR n 1 34 VAL n 1 35 ILE n 1 36 THR n 1 37 THR n 1 38 LEU n 1 39 HIS n 1 40 SER n 1 41 VAL n 1 42 SER n 1 43 LYS n 1 44 LEU n 1 45 PRO n 1 46 GLU n 1 47 ILE n 1 48 SER n 1 49 VAL n 1 50 GLN n 1 51 VAL n 1 52 ALA n 1 53 THR n 1 54 THR n 1 55 GLY n 1 56 GLY n 1 57 ILE n 1 58 ARG n 1 59 ARG n 1 60 PHE n 1 61 PRO n 1 62 ALA n 1 63 GLN n 1 64 VAL n 1 65 VAL n 1 66 LYS n 1 67 THR n 1 68 ILE n 1 69 PRO n 1 70 GLY n 1 71 HIS n 1 72 ASP n 1 73 LEU n 1 74 ALA n 1 75 LEU n 1 76 LEU n 1 77 LYS n 1 78 MET n 1 79 GLN n 1 80 THR n 1 81 THR n 1 82 GLU n 1 83 LYS n 1 84 PHE n 1 85 LEU n 1 86 HIS n 1 87 PHE n 1 88 ARG n 1 89 MET n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 GLN n 1 94 THR n 1 95 VAL n 1 96 VAL n 1 97 PRO n 1 98 GLY n 1 99 GLN n 1 100 GLN n 1 101 VAL n 1 102 PHE n 1 103 ALA n 1 104 PHE n 1 105 GLY n 1 106 ARG n 1 107 ASN n 1 108 MET n 1 109 ALA n 1 110 GLY n 1 111 ALA n 1 112 PRO n 1 113 LEU n 1 114 VAL n 1 115 ARG n 1 116 GLN n 1 117 GLY n 1 118 LEU n 1 119 VAL n 1 120 GLN n 1 121 SER n 1 122 ALA n 1 123 ASP n 1 124 ALA n 1 125 PRO n 1 126 LEU n 1 127 ALA n 1 128 VAL n 1 129 GLY n 1 130 ALA n 1 131 THR n 1 132 GLN n 1 133 ILE n 1 134 THR n 1 135 HIS n 1 136 LEU n 1 137 LEU n 1 138 ARG n 1 139 SER n 1 140 ASP n 1 141 ALA n 1 142 VAL n 1 143 TYR n 1 144 SER n 1 145 TRP n 1 146 GLU n 1 147 GLN n 1 148 THR n 1 149 GLY n 1 150 GLY n 1 151 PRO n 1 152 LEU n 1 153 VAL n 1 154 ASN n 1 155 ALA n 1 156 GLN n 1 157 GLY n 1 158 ASP n 1 159 LEU n 1 160 VAL n 1 161 GLY n 1 162 ILE n 1 163 ASN n 1 164 ILE n 1 165 ALA n 1 166 ALA n 1 167 THR n 1 168 GLY n 1 169 PRO n 1 170 THR n 1 171 GLY n 1 172 LYS n 1 173 VAL n 1 174 GLU n 1 175 GLY n 1 176 PHE n 1 177 THR n 1 178 VAL n 1 179 PRO n 1 180 ALA n 1 181 GLN n 1 182 VAL n 1 183 ILE n 1 184 VAL n 1 185 SER n 1 186 HIS n 1 187 LEU n 1 188 GLN n 1 189 ASP n 2 1 UNK n 2 2 UNK n 2 3 UNK n 2 4 UNK n 2 5 UNK n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? amb_0969 ? ? ? ? ? ? 'Magnetospirillum magneticum AMB-1' 342108 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 CodonPlus' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Magnetospirillum magneticum AMB-1' 342108 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 CodonPlus' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNK 'L-peptide linking' . UNKNOWN ? 'C4 H9 N O2' 103.120 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 34 34 LEU LEU A . n A 1 2 TYR 2 35 35 TYR TYR A . n A 1 3 HIS 3 36 36 HIS HIS A . n A 1 4 THR 4 37 37 THR THR A . n A 1 5 VAL 5 38 38 VAL VAL A . n A 1 6 PRO 6 39 39 PRO PRO A . n A 1 7 PRO 7 40 40 PRO PRO A . n A 1 8 ALA 8 41 41 ALA ALA A . n A 1 9 VAL 9 42 42 VAL VAL A . n A 1 10 VAL 10 43 43 VAL VAL A . n A 1 11 GLY 11 44 44 GLY GLY A . n A 1 12 VAL 12 45 45 VAL VAL A . n A 1 13 GLY 13 46 46 GLY GLY A . n A 1 14 GLY 14 47 47 GLY GLY A . n A 1 15 GLY 15 48 48 GLY GLY A . n A 1 16 GLY 16 49 49 GLY GLY A . n A 1 17 VAL 17 50 50 VAL VAL A . n A 1 18 ASN 18 51 51 ASN ASN A . n A 1 19 ALA 19 52 52 ALA ALA A . n A 1 20 GLY 20 53 53 GLY GLY A . n A 1 21 PRO 21 54 54 PRO PRO A . n A 1 22 VAL 22 55 55 VAL VAL A . n A 1 23 ALA 23 56 56 ALA ALA A . n A 1 24 SER 24 57 57 SER SER A . n A 1 25 GLY 25 58 58 GLY GLY A . n A 1 26 ALA 26 59 59 ALA ALA A . n A 1 27 ILE 27 60 60 ILE ILE A . n A 1 28 VAL 28 61 61 VAL VAL A . n A 1 29 GLY 29 62 62 GLY GLY A . n A 1 30 THR 30 63 63 THR THR A . n A 1 31 ASN 31 64 64 ASN ASN A . n A 1 32 GLY 32 65 65 GLY GLY A . n A 1 33 TYR 33 66 66 TYR TYR A . n A 1 34 VAL 34 67 67 VAL VAL A . n A 1 35 ILE 35 68 68 ILE ILE A . n A 1 36 THR 36 69 69 THR THR A . n A 1 37 THR 37 70 70 THR THR A . n A 1 38 LEU 38 71 71 LEU LEU A . n A 1 39 HIS 39 72 72 HIS HIS A . n A 1 40 SER 40 73 73 SER SER A . n A 1 41 VAL 41 74 74 VAL VAL A . n A 1 42 SER 42 75 75 SER SER A . n A 1 43 LYS 43 76 76 LYS LYS A . n A 1 44 LEU 44 77 77 LEU LEU A . n A 1 45 PRO 45 78 78 PRO PRO A . n A 1 46 GLU 46 79 79 GLU GLU A . n A 1 47 ILE 47 80 80 ILE ILE A . n A 1 48 SER 48 81 81 SER SER A . n A 1 49 VAL 49 82 82 VAL VAL A . n A 1 50 GLN 50 83 83 GLN GLN A . n A 1 51 VAL 51 84 84 VAL VAL A . n A 1 52 ALA 52 85 85 ALA ALA A . n A 1 53 THR 53 86 86 THR THR A . n A 1 54 THR 54 87 87 THR THR A . n A 1 55 GLY 55 88 88 GLY GLY A . n A 1 56 GLY 56 89 89 GLY GLY A . n A 1 57 ILE 57 90 90 ILE ILE A . n A 1 58 ARG 58 91 91 ARG ARG A . n A 1 59 ARG 59 92 92 ARG ARG A . n A 1 60 PHE 60 93 93 PHE PHE A . n A 1 61 PRO 61 94 94 PRO PRO A . n A 1 62 ALA 62 95 95 ALA ALA A . n A 1 63 GLN 63 96 96 GLN GLN A . n A 1 64 VAL 64 97 97 VAL VAL A . n A 1 65 VAL 65 98 98 VAL VAL A . n A 1 66 LYS 66 99 99 LYS LYS A . n A 1 67 THR 67 100 100 THR THR A . n A 1 68 ILE 68 101 101 ILE ILE A . n A 1 69 PRO 69 102 102 PRO PRO A . n A 1 70 GLY 70 103 103 GLY GLY A . n A 1 71 HIS 71 104 104 HIS HIS A . n A 1 72 ASP 72 105 105 ASP ASP A . n A 1 73 LEU 73 106 106 LEU LEU A . n A 1 74 ALA 74 107 107 ALA ALA A . n A 1 75 LEU 75 108 108 LEU LEU A . n A 1 76 LEU 76 109 109 LEU LEU A . n A 1 77 LYS 77 110 110 LYS LYS A . n A 1 78 MET 78 111 111 MET MET A . n A 1 79 GLN 79 112 112 GLN GLN A . n A 1 80 THR 80 113 113 THR THR A . n A 1 81 THR 81 114 114 THR THR A . n A 1 82 GLU 82 115 115 GLU GLU A . n A 1 83 LYS 83 116 116 LYS LYS A . n A 1 84 PHE 84 117 117 PHE PHE A . n A 1 85 LEU 85 118 118 LEU LEU A . n A 1 86 HIS 86 119 119 HIS HIS A . n A 1 87 PHE 87 120 120 PHE PHE A . n A 1 88 ARG 88 121 121 ARG ARG A . n A 1 89 MET 89 122 122 MET MET A . n A 1 90 ALA 90 123 123 ALA ALA A . n A 1 91 ASP 91 124 124 ASP ASP A . n A 1 92 VAL 92 125 125 VAL VAL A . n A 1 93 GLN 93 126 126 GLN GLN A . n A 1 94 THR 94 127 127 THR THR A . n A 1 95 VAL 95 128 128 VAL VAL A . n A 1 96 VAL 96 129 129 VAL VAL A . n A 1 97 PRO 97 130 130 PRO PRO A . n A 1 98 GLY 98 131 131 GLY GLY A . n A 1 99 GLN 99 132 132 GLN GLN A . n A 1 100 GLN 100 133 133 GLN GLN A . n A 1 101 VAL 101 134 134 VAL VAL A . n A 1 102 PHE 102 135 135 PHE PHE A . n A 1 103 ALA 103 136 136 ALA ALA A . n A 1 104 PHE 104 137 137 PHE PHE A . n A 1 105 GLY 105 138 138 GLY GLY A . n A 1 106 ARG 106 139 139 ARG ARG A . n A 1 107 ASN 107 140 140 ASN ASN A . n A 1 108 MET 108 141 141 MET MET A . n A 1 109 ALA 109 142 142 ALA ALA A . n A 1 110 GLY 110 143 143 GLY GLY A . n A 1 111 ALA 111 144 144 ALA ALA A . n A 1 112 PRO 112 145 145 PRO PRO A . n A 1 113 LEU 113 146 146 LEU LEU A . n A 1 114 VAL 114 147 147 VAL VAL A . n A 1 115 ARG 115 148 148 ARG ARG A . n A 1 116 GLN 116 149 149 GLN GLN A . n A 1 117 GLY 117 150 150 GLY GLY A . n A 1 118 LEU 118 151 151 LEU LEU A . n A 1 119 VAL 119 152 152 VAL VAL A . n A 1 120 GLN 120 153 153 GLN GLN A . n A 1 121 SER 121 154 154 SER SER A . n A 1 122 ALA 122 155 155 ALA ALA A . n A 1 123 ASP 123 156 156 ASP ASP A . n A 1 124 ALA 124 157 157 ALA ALA A . n A 1 125 PRO 125 158 158 PRO PRO A . n A 1 126 LEU 126 159 159 LEU LEU A . n A 1 127 ALA 127 160 160 ALA ALA A . n A 1 128 VAL 128 161 161 VAL VAL A . n A 1 129 GLY 129 162 162 GLY GLY A . n A 1 130 ALA 130 163 163 ALA ALA A . n A 1 131 THR 131 164 164 THR THR A . n A 1 132 GLN 132 165 165 GLN GLN A . n A 1 133 ILE 133 166 166 ILE ILE A . n A 1 134 THR 134 167 167 THR THR A . n A 1 135 HIS 135 168 168 HIS HIS A . n A 1 136 LEU 136 169 169 LEU LEU A . n A 1 137 LEU 137 170 170 LEU LEU A . n A 1 138 ARG 138 171 171 ARG ARG A . n A 1 139 SER 139 172 172 SER SER A . n A 1 140 ASP 140 173 173 ASP ASP A . n A 1 141 ALA 141 174 174 ALA ALA A . n A 1 142 VAL 142 175 175 VAL VAL A . n A 1 143 TYR 143 176 176 TYR TYR A . n A 1 144 SER 144 177 177 SER SER A . n A 1 145 TRP 145 178 178 TRP TRP A . n A 1 146 GLU 146 179 179 GLU GLU A . n A 1 147 GLN 147 180 180 GLN GLN A . n A 1 148 THR 148 181 181 THR THR A . n A 1 149 GLY 149 182 182 GLY GLY A . n A 1 150 GLY 150 183 183 GLY GLY A . n A 1 151 PRO 151 184 184 PRO PRO A . n A 1 152 LEU 152 185 185 LEU LEU A . n A 1 153 VAL 153 186 186 VAL VAL A . n A 1 154 ASN 154 187 187 ASN ASN A . n A 1 155 ALA 155 188 188 ALA ALA A . n A 1 156 GLN 156 189 189 GLN GLN A . n A 1 157 GLY 157 190 190 GLY GLY A . n A 1 158 ASP 158 191 191 ASP ASP A . n A 1 159 LEU 159 192 192 LEU LEU A . n A 1 160 VAL 160 193 193 VAL VAL A . n A 1 161 GLY 161 194 194 GLY GLY A . n A 1 162 ILE 162 195 195 ILE ILE A . n A 1 163 ASN 163 196 196 ASN ASN A . n A 1 164 ILE 164 197 197 ILE ILE A . n A 1 165 ALA 165 198 198 ALA ALA A . n A 1 166 ALA 166 199 199 ALA ALA A . n A 1 167 THR 167 200 200 THR THR A . n A 1 168 GLY 168 201 201 GLY GLY A . n A 1 169 PRO 169 202 202 PRO PRO A . n A 1 170 THR 170 203 203 THR THR A . n A 1 171 GLY 171 204 204 GLY GLY A . n A 1 172 LYS 172 205 205 LYS LYS A . n A 1 173 VAL 173 206 206 VAL VAL A . n A 1 174 GLU 174 207 207 GLU GLU A . n A 1 175 GLY 175 208 208 GLY GLY A . n A 1 176 PHE 176 209 209 PHE PHE A . n A 1 177 THR 177 210 210 THR THR A . n A 1 178 VAL 178 211 211 VAL VAL A . n A 1 179 PRO 179 212 212 PRO PRO A . n A 1 180 ALA 180 213 213 ALA ALA A . n A 1 181 GLN 181 214 214 GLN GLN A . n A 1 182 VAL 182 215 215 VAL VAL A . n A 1 183 ILE 183 216 216 ILE ILE A . n A 1 184 VAL 184 217 217 VAL VAL A . n A 1 185 SER 185 218 218 SER SER A . n A 1 186 HIS 186 219 219 HIS HIS A . n A 1 187 LEU 187 220 220 LEU LEU A . n A 1 188 GLN 188 221 221 GLN GLN A . n A 1 189 ASP 189 222 222 ASP ASP A . n B 2 1 UNK 1 103 103 UNK ALA C . n B 2 2 UNK 2 104 104 UNK ALA C . n B 2 3 UNK 3 105 105 UNK ALA C . n B 2 4 UNK 4 106 106 UNK ALA C . n B 2 5 UNK 5 107 107 UNK ALA C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 11 HOH HOH A . C 3 HOH 2 302 10 HOH HOH A . C 3 HOH 3 303 4 HOH HOH A . C 3 HOH 4 304 3 HOH HOH A . C 3 HOH 5 305 20 HOH HOH A . C 3 HOH 6 306 14 HOH HOH A . C 3 HOH 7 307 9 HOH HOH A . C 3 HOH 8 308 19 HOH HOH A . C 3 HOH 9 309 16 HOH HOH A . C 3 HOH 10 310 13 HOH HOH A . C 3 HOH 11 311 7 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 1 HOH HOH A . C 3 HOH 14 314 2 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 8 HOH HOH A . C 3 HOH 17 317 18 HOH HOH A . C 3 HOH 18 318 17 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5HM9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 130.215 _cell.length_a_esd ? _cell.length_b 130.215 _cell.length_b_esd ? _cell.length_c 130.215 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HM9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5HM9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.63 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 73.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50mM Na Acetate pH 4.6, 3.6M NH4Cl, 5% glycercol' _exptl_crystal_grow.pdbx_pH_range '4.0 - 5.0' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-12-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.116 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.116 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 56.380 _reflns.entry_id 5HM9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.600 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12179 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 15.200 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 27.345 _reflns.pdbx_netI_over_sigmaI 10.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.600 2.640 ? ? ? ? ? ? ? 98.500 ? ? ? ? 0.695 ? ? ? ? ? ? ? ? 12.300 ? ? ? ? ? ? ? 1 1 ? ? 2.640 2.690 ? ? ? ? ? ? ? 99.700 ? ? ? ? 0.677 ? ? ? ? ? ? ? ? 12.800 ? ? ? ? ? ? ? 2 1 ? ? 2.690 2.740 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.590 ? ? ? ? ? ? ? ? 13.100 ? ? ? ? ? ? ? 3 1 ? ? 2.740 2.800 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.561 ? ? ? ? ? ? ? ? 13.100 ? ? ? ? ? ? ? 4 1 ? ? 2.800 2.860 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.495 ? ? ? ? ? ? ? ? 13.500 ? ? ? ? ? ? ? 5 1 ? ? 2.860 2.930 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.433 ? ? ? ? ? ? ? ? 14.200 ? ? ? ? ? ? ? 6 1 ? ? 2.930 3.000 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.366 ? ? ? ? ? ? ? ? 14.400 ? ? ? ? ? ? ? 7 1 ? ? 3.000 3.080 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.315 ? ? ? ? ? ? ? ? 14.800 ? ? ? ? ? ? ? 8 1 ? ? 3.080 3.170 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.253 ? ? ? ? ? ? ? ? 15.200 ? ? ? ? ? ? ? 9 1 ? ? 3.170 3.280 ? ? ? ? ? ? ? 99.500 ? ? ? ? 0.211 ? ? ? ? ? ? ? ? 15.800 ? ? ? ? ? ? ? 10 1 ? ? 3.280 3.390 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.170 ? ? ? ? ? ? ? ? 16.200 ? ? ? ? ? ? ? 11 1 ? ? 3.390 3.530 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.150 ? ? ? ? ? ? ? ? 16.000 ? ? ? ? ? ? ? 12 1 ? ? 3.530 3.690 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.126 ? ? ? ? ? ? ? ? 15.900 ? ? ? ? ? ? ? 13 1 ? ? 3.690 3.880 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.111 ? ? ? ? ? ? ? ? 16.300 ? ? ? ? ? ? ? 14 1 ? ? 3.880 4.130 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.079 ? ? ? ? ? ? ? ? 16.700 ? ? ? ? ? ? ? 15 1 ? ? 4.130 4.450 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 17.100 ? ? ? ? ? ? ? 16 1 ? ? 4.450 4.890 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 17.000 ? ? ? ? ? ? ? 17 1 ? ? 4.890 5.600 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 16.600 ? ? ? ? ? ? ? 18 1 ? ? 5.600 7.050 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 16.200 ? ? ? ? ? ? ? 19 1 ? ? 7.050 50.000 ? ? ? ? ? ? ? 99.400 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 15.600 ? ? ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 123.190 _refine.B_iso_mean 56.1871 _refine.B_iso_min 34.310 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5HM9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6000 _refine.ls_d_res_low 43.4050 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12177 _refine.ls_number_reflns_R_free 602 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7800 _refine.ls_percent_reflns_R_free 4.9400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2047 _refine.ls_R_factor_R_free 0.2322 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2032 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.400 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1KY9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.4900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.6000 _refine_hist.d_res_low 43.4050 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 1416 _refine_hist.pdbx_number_residues_total 194 _refine_hist.pdbx_B_iso_mean_solvent 47.12 _refine_hist.pdbx_number_atoms_protein 1398 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 1425 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.115 ? 1948 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.051 ? 237 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 254 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.643 ? 494 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5991 2.8606 2944 . 142 2802 100.0000 . . . 0.2996 . 0.2562 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 2.8606 3.2744 2979 . 159 2820 100.0000 . . . 0.3209 . 0.2416 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 3.2744 4.1249 3026 . 144 2882 100.0000 . . . 0.2631 . 0.2035 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 4.1249 43.4110 3228 . 157 3071 100.0000 . . . 0.1778 . 0.1810 . . . . . . 4 . . . # _struct.entry_id 5HM9 _struct.title 'Crystal structure of MamO protease domain from Magnetospirillum magneticum (apo form)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5HM9 _struct_keywords.text 'trypsin, biomineralization, pseudo-protease, magnetosome, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q2W8Q2_MAGSA Q2W8Q2 ? 1 ;LYHTVPPAVVGVGGGGVNAGPVASGAIVGTNGYVITTLHSVSKLPEISVQVATTGGIRRFPAQVVKTIPGHDLALLKMQT TEKFLHFRMADVQTVVPGQQVFAFGRNMAGAPLVRQGLVQSADAPLAVGATQITHLLRSDAVYSWEQTGGPLVNAQGDLV GINIAATGPTGKVEGFTVPAQVIVSHLQD ; 78 2 PDB 5HM9 5HM9 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5HM9 A 1 ? 189 ? Q2W8Q2 78 ? 266 ? 34 222 2 2 5HM9 C 1 ? 5 ? 5HM9 103 ? 107 ? 103 107 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 670 ? 1 MORE -5 ? 1 'SSA (A^2)' 8990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 5 ? PRO A 7 ? VAL A 38 PRO A 40 5 ? 3 HELX_P HELX_P2 AA2 LEU A 38 ? SER A 42 ? LEU A 71 SER A 75 1 ? 5 HELX_P HELX_P3 AA3 PRO A 69 ? HIS A 71 ? PRO A 102 HIS A 104 5 ? 3 HELX_P HELX_P4 AA4 ARG A 88 ? VAL A 92 ? ARG A 121 VAL A 125 5 ? 5 HELX_P HELX_P5 AA5 SER A 144 ? THR A 148 ? SER A 177 THR A 181 5 ? 5 HELX_P HELX_P6 AA6 ALA A 180 ? HIS A 186 ? ALA A 213 HIS A 219 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B UNK 1 C ? ? ? 1_555 B UNK 2 N ? ? C UNK 103 C UNK 104 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? B UNK 2 C ? ? ? 1_555 B UNK 3 N ? ? C UNK 104 C UNK 105 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? B UNK 3 C ? ? ? 1_555 B UNK 4 N ? ? C UNK 105 C UNK 106 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? B UNK 4 C ? ? ? 1_555 B UNK 5 N ? ? C UNK 106 C UNK 107 1_555 ? ? ? ? ? ? ? 1.336 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel AA2 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 9 ? GLY A 13 ? VAL A 42 GLY A 46 AA1 2 ALA A 23 ? GLY A 29 ? ALA A 56 GLY A 62 AA1 3 TYR A 33 ? THR A 37 ? TYR A 66 THR A 70 AA1 4 LEU A 73 ? MET A 78 ? LEU A 106 MET A 111 AA1 5 GLY A 56 ? ILE A 68 ? GLY A 89 ILE A 101 AA1 6 ILE A 47 ? THR A 53 ? ILE A 80 THR A 86 AA1 7 VAL A 9 ? GLY A 13 ? VAL A 42 GLY A 46 AA2 1 PRO A 112 ? VAL A 128 ? PRO A 145 VAL A 161 AA2 2 THR A 131 ? SER A 139 ? THR A 164 SER A 172 AA2 3 VAL A 173 ? PRO A 179 ? VAL A 206 PRO A 212 AA2 4 LEU A 159 ? THR A 167 ? LEU A 192 THR A 200 AA2 5 PRO A 112 ? VAL A 128 ? PRO A 145 VAL A 161 AA2 6 GLN A 100 ? ARG A 106 ? GLN A 133 ARG A 139 AA2 7 PRO A 151 ? VAL A 153 ? PRO A 184 VAL A 186 AA2 8 LEU A 159 ? THR A 167 ? LEU A 192 THR A 200 AA2 9 UNK B 2 ? UNK B 3 ? UNK C 104 UNK C 105 AA2 10 LEU A 159 ? THR A 167 ? LEU A 192 THR A 200 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 12 ? N VAL A 45 O ALA A 23 ? O ALA A 56 AA1 2 3 N VAL A 28 ? N VAL A 61 O TYR A 33 ? O TYR A 66 AA1 3 4 N VAL A 34 ? N VAL A 67 O LEU A 76 ? O LEU A 109 AA1 4 5 O LEU A 75 ? O LEU A 108 N VAL A 65 ? N VAL A 98 AA1 5 6 O ARG A 58 ? O ARG A 91 N VAL A 51 ? N VAL A 84 AA1 6 7 O SER A 48 ? O SER A 81 N GLY A 13 ? N GLY A 46 AA2 1 2 N ALA A 124 ? N ALA A 157 O LEU A 136 ? O LEU A 169 AA2 2 3 N LEU A 137 ? N LEU A 170 O THR A 177 ? O THR A 210 AA2 3 4 O VAL A 178 ? O VAL A 211 N ILE A 162 ? N ILE A 195 AA2 5 6 O LEU A 113 ? O LEU A 146 N GLY A 105 ? N GLY A 138 AA2 6 7 N PHE A 102 ? N PHE A 135 O VAL A 153 ? O VAL A 186 AA2 7 8 N LEU A 152 ? N LEU A 185 O VAL A 160 ? O VAL A 193 AA2 8 9 N THR A 167 ? N THR A 200 O UNK B 2 ? O UNK C 104 AA2 9 10 O UNK B 2 ? O UNK C 104 N THR A 167 ? N THR A 200 # _pdbx_entry_details.entry_id 5HM9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 221 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -135.11 _pdbx_validate_torsion.psi -91.41 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM084122 1 'Office of Naval Research' 'United States' N000141310421 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KY9 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5HM9 _atom_sites.fract_transf_matrix[1][1] 0.007680 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007680 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007680 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_