HEADER LIGASE 20-JAN-16 5HPK TITLE SYSTEM-WIDE MODULATION OF HECT E3 LIGASES WITH SELECTIVE UBIQUITIN TITLE 2 VARIANT PROBES: NEDD4L AND UBV NL.1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HECT DOMAIN (UNP RESIDUES 594-975); COMPND 5 SYNONYM: NEDD4.2,NEDD4-2; COMPND 6 EC: 6.3.2.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UBIQUITIN VARIANT NL.1; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEDD4L, KIAA0439, NEDL3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PRSF-DUET KEYWDS HECT, E3 LIGASE, NEDD4L, UBIQUITIN, UBV, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR K.-P.WU,M.MUKHERJEE,P.Y.MERCREDI,B.A.SCHULMAN REVDAT 4 27-SEP-23 5HPK 1 JRNL REMARK REVDAT 3 20-APR-16 5HPK 1 JRNL REVDAT 2 23-MAR-16 5HPK 1 JRNL REVDAT 1 16-MAR-16 5HPK 0 JRNL AUTH W.ZHANG,K.P.WU,M.A.SARTORI,H.B.KAMADURAI,A.ORDUREAU,C.JIANG, JRNL AUTH 2 P.Y.MERCREDI,R.MURCHIE,J.HU,A.PERSAUD,M.MUKHERJEE,N.LI, JRNL AUTH 3 A.DOYE,J.R.WALKER,Y.SHENG,Z.HAO,Y.LI,K.R.BROWN,E.LEMICHEZ, JRNL AUTH 4 J.CHEN,Y.TONG,J.W.HARPER,J.MOFFAT,D.ROTIN,B.A.SCHULMAN, JRNL AUTH 5 S.S.SIDHU JRNL TITL SYSTEM-WIDE MODULATION OF HECT E3 LIGASES WITH SELECTIVE JRNL TITL 2 UBIQUITIN VARIANT PROBES. JRNL REF MOL.CELL V. 62 121 2016 JRNL REFN ISSN 1097-2765 JRNL PMID 26949039 JRNL DOI 10.1016/J.MOLCEL.2016.02.005 REMARK 2 REMARK 2 RESOLUTION. 2.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6670 - 5.8513 0.98 2702 170 0.1895 0.1780 REMARK 3 2 5.8513 - 4.6476 1.00 2645 139 0.1893 0.1714 REMARK 3 3 4.6476 - 4.0611 1.00 2588 155 0.1792 0.2038 REMARK 3 4 4.0611 - 3.6902 1.00 2598 129 0.2038 0.2229 REMARK 3 5 3.6902 - 3.4259 1.00 2582 121 0.2152 0.2660 REMARK 3 6 3.4259 - 3.2241 1.00 2575 135 0.2344 0.2703 REMARK 3 7 3.2241 - 3.0627 1.00 2557 142 0.2330 0.2413 REMARK 3 8 3.0627 - 2.9294 1.00 2566 134 0.2463 0.3186 REMARK 3 9 2.9294 - 2.8167 1.00 2533 135 0.2427 0.2688 REMARK 3 10 2.8167 - 2.7195 1.00 2551 143 0.2511 0.3043 REMARK 3 11 2.7195 - 2.6345 1.00 2531 149 0.2453 0.2819 REMARK 3 12 2.6345 - 2.5592 1.00 2532 124 0.2493 0.2828 REMARK 3 13 2.5592 - 2.4919 1.00 2553 128 0.2542 0.3010 REMARK 3 14 2.4919 - 2.4311 1.00 2539 127 0.2695 0.3084 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3841 REMARK 3 ANGLE : 1.207 5186 REMARK 3 CHIRALITY : 0.052 543 REMARK 3 PLANARITY : 0.006 674 REMARK 3 DIHEDRAL : 15.170 1456 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217385. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38009 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.431 REMARK 200 RESOLUTION RANGE LOW (A) : 45.976 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.94 REMARK 200 R MERGE FOR SHELL (I) : 0.89000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ND7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CACODYLATE, NACL, PEG 8000, 1 REMARK 280 -BUTANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 75.65300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 75.65300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 75.65300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 75.65300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 75.65300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.65300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 75.65300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.65300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1039 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 634 REMARK 465 GLU A 635 REMARK 465 LYS A 636 REMARK 465 GLY A 637 REMARK 465 LEU A 638 REMARK 465 GLY A 950 REMARK 465 PHE A 951 REMARK 465 GLU A 952 REMARK 465 GLY A 953 REMARK 465 VAL A 954 REMARK 465 ASP A 955 REMARK 465 MET B -7 REMARK 465 GLY B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 ASN B 78 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 104 O HOH B 106 2.11 REMARK 500 O HOH A 1036 O HOH A 1119 2.17 REMARK 500 O GLU B 16 NZ LYS B 29 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 833 CB CYS A 833 SG 0.239 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 756 CA - CB - SG ANGL. DEV. = 9.2 DEGREES REMARK 500 CYS A 833 CB - CA - C ANGL. DEV. = 8.7 DEGREES REMARK 500 LEU A 835 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 574 -29.57 75.83 REMARK 500 ASP A 593 44.73 -103.35 REMARK 500 PHE A 755 46.91 -81.88 REMARK 500 GLN A 845 8.57 -69.09 REMARK 500 HIS A 846 21.98 -143.27 REMARK 500 GLN A 903 88.14 -168.91 REMARK 500 PRO A 913 -10.38 -49.10 REMARK 500 PRO B 38 -32.60 -38.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HPL RELATED DB: PDB REMARK 900 RELATED ID: 5HPS RELATED DB: PDB REMARK 900 RELATED ID: 5HPT RELATED DB: PDB DBREF 5HPK A 574 955 UNP Q96PU5 NED4L_HUMAN 594 975 DBREF 5HPK B -7 78 PDB 5HPK 5HPK -7 78 SEQADV 5HPK GLY A 573 UNP Q96PU5 EXPRESSION TAG SEQRES 1 A 383 GLY SER ARG GLU PHE LYS GLN LYS TYR ASP TYR PHE ARG SEQRES 2 A 383 LYS LYS LEU LYS LYS PRO ALA ASP ILE PRO ASN ARG PHE SEQRES 3 A 383 GLU MET LYS LEU HIS ARG ASN ASN ILE PHE GLU GLU SER SEQRES 4 A 383 TYR ARG ARG ILE MET SER VAL LYS ARG PRO ASP VAL LEU SEQRES 5 A 383 LYS ALA ARG LEU TRP ILE GLU PHE GLU SER GLU LYS GLY SEQRES 6 A 383 LEU ASP TYR GLY GLY VAL ALA ARG GLU TRP PHE PHE LEU SEQRES 7 A 383 LEU SER LYS GLU MET PHE ASN PRO TYR TYR GLY LEU PHE SEQRES 8 A 383 GLU TYR SER ALA THR ASP ASN TYR THR LEU GLN ILE ASN SEQRES 9 A 383 PRO ASN SER GLY LEU CYS ASN GLU ASP HIS LEU SER TYR SEQRES 10 A 383 PHE THR PHE ILE GLY ARG VAL ALA GLY LEU ALA VAL PHE SEQRES 11 A 383 HIS GLY LYS LEU LEU ASP GLY PHE PHE ILE ARG PRO PHE SEQRES 12 A 383 TYR LYS MET MET LEU GLY LYS GLN ILE THR LEU ASN ASP SEQRES 13 A 383 MET GLU SER VAL ASP SER GLU TYR TYR ASN SER LEU LYS SEQRES 14 A 383 TRP ILE LEU GLU ASN ASP PRO THR GLU LEU ASP LEU MET SEQRES 15 A 383 PHE CYS ILE ASP GLU GLU ASN PHE GLY GLN THR TYR GLN SEQRES 16 A 383 VAL ASP LEU LYS PRO ASN GLY SER GLU ILE MET VAL THR SEQRES 17 A 383 ASN GLU ASN LYS ARG GLU TYR ILE ASP LEU VAL ILE GLN SEQRES 18 A 383 TRP ARG PHE VAL ASN ARG VAL GLN LYS GLN MET ASN ALA SEQRES 19 A 383 PHE LEU GLU GLY PHE THR GLU LEU LEU PRO ILE ASP LEU SEQRES 20 A 383 ILE LYS ILE PHE ASP GLU ASN GLU LEU GLU LEU LEU MET SEQRES 21 A 383 CYS GLY LEU GLY ASP VAL ASP VAL ASN ASP TRP ARG GLN SEQRES 22 A 383 HIS SER ILE TYR LYS ASN GLY TYR CYS PRO ASN HIS PRO SEQRES 23 A 383 VAL ILE GLN TRP PHE TRP LYS ALA VAL LEU LEU MET ASP SEQRES 24 A 383 ALA GLU LYS ARG ILE ARG LEU LEU GLN PHE VAL THR GLY SEQRES 25 A 383 THR SER ARG VAL PRO MET ASN GLY PHE ALA GLU LEU TYR SEQRES 26 A 383 GLY SER ASN GLY PRO GLN LEU PHE THR ILE GLU GLN TRP SEQRES 27 A 383 GLY SER PRO GLU LYS LEU PRO ARG ALA HIS THR CYS PHE SEQRES 28 A 383 ASN ARG LEU ASP LEU PRO PRO TYR GLU THR PHE GLU ASP SEQRES 29 A 383 LEU ARG GLU LYS LEU LEU MET ALA VAL GLU ASN ALA GLN SEQRES 30 A 383 GLY PHE GLU GLY VAL ASP SEQRES 1 B 86 MET GLY HIS HIS HIS HIS HIS HIS MET ARG ILE PHE VAL SEQRES 2 B 86 ARG THR PRO THR ARG LYS THR ILE THR LEU GLU VAL GLU SEQRES 3 B 86 PRO SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN SEQRES 4 B 86 ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN VAL LEU ILE SEQRES 5 B 86 PHE ALA GLY ASN ARG LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 B 86 ASP TYR ASN ILE PRO LYS GLU SER THR LEU TYR LEU PHE SEQRES 7 B 86 MET ARG LEU ARG GLY LEU GLU ASN FORMUL 3 HOH *131(H2 O) HELIX 1 AA1 SER A 574 LEU A 588 1 15 HELIX 2 AA2 HIS A 603 ASN A 605 5 3 HELIX 3 AA3 ASN A 606 SER A 617 1 12 HELIX 4 AA4 ARG A 620 ALA A 626 5 7 HELIX 5 AA5 TYR A 640 PHE A 656 1 17 HELIX 6 AA6 ASN A 657 GLY A 661 5 5 HELIX 7 AA7 ASN A 678 ASN A 683 1 6 HELIX 8 AA8 ASP A 685 HIS A 703 1 19 HELIX 9 AA9 ILE A 712 LEU A 720 1 9 HELIX 10 AB1 THR A 725 GLU A 730 1 6 HELIX 11 AB2 ASP A 733 ASN A 746 1 14 HELIX 12 AB3 PRO A 748 ASP A 752 5 5 HELIX 13 AB4 ASN A 773 ILE A 777 5 5 HELIX 14 AB5 ASN A 783 VAL A 797 1 15 HELIX 15 AB6 VAL A 800 THR A 812 1 13 HELIX 16 AB7 PRO A 816 LYS A 821 1 6 HELIX 17 AB8 ASP A 824 CYS A 833 1 10 HELIX 18 AB9 ASP A 839 GLN A 845 1 7 HELIX 19 AC1 HIS A 857 MET A 870 1 14 HELIX 20 AC2 ASP A 871 GLY A 884 1 14 HELIX 21 AC3 GLY A 892 LEU A 896 5 5 HELIX 22 AC4 THR A 921 PHE A 923 5 3 HELIX 23 AC5 THR A 933 ALA A 948 1 16 HELIX 24 AC6 THR B 22 GLY B 35 1 14 HELIX 25 AC7 PRO B 37 ASP B 39 5 3 HELIX 26 AC8 LEU B 56 ASN B 60 5 5 SHEET 1 AA1 2 ARG A 597 LEU A 602 0 SHEET 2 AA1 2 ARG A 627 PHE A 632 1 O ARG A 627 N PHE A 598 SHEET 1 AA2 2 PHE A 663 TYR A 665 0 SHEET 2 AA2 2 LEU A 673 ILE A 675 -1 O GLN A 674 N GLU A 664 SHEET 1 AA3 2 CYS A 756 ASN A 761 0 SHEET 2 AA3 2 GLN A 764 ASP A 769 -1 O TYR A 766 N GLU A 759 SHEET 1 AA4 4 SER A 847 LYS A 850 0 SHEET 2 AA4 4 PHE A 905 GLN A 909 1 O PHE A 905 N ILE A 848 SHEET 3 AA4 4 ARG A 925 LEU A 928 1 O LEU A 926 N THR A 906 SHEET 4 AA4 4 ARG A 918 HIS A 920 -1 N ARG A 918 O ASP A 927 SHEET 1 AA5 5 LYS B 11 GLU B 16 0 SHEET 2 AA5 5 ARG B 2 THR B 7 -1 N VAL B 5 O ILE B 13 SHEET 3 AA5 5 THR B 66 MET B 71 1 O LEU B 67 N PHE B 4 SHEET 4 AA5 5 GLN B 41 PHE B 45 -1 N ILE B 44 O TYR B 68 SHEET 5 AA5 5 ASN B 48 ARG B 49 -1 O ASN B 48 N PHE B 45 CISPEP 1 HIS B 0 MET B 1 0 -4.86 CRYST1 151.306 151.306 85.952 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006609 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011634 0.00000