HEADER HYDROLASE 21-JAN-16 5HQ4 TITLE A GLYCOSIDE HYDROLASE FAMILY 97 ENZYME FROM PSEUDOALTEROMONAS SP. TITLE 2 STRAIN K8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 20-680; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOALTEROMONAS SP. K8; SOURCE 3 ORGANISM_TAXID: 1719649; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22 KEYWDS GLUCOSIDE HYDROLASE, FAMILY 97, CHLORIDE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LI,C.HE,Y.XIAO REVDAT 2 08-NOV-23 5HQ4 1 LINK REVDAT 1 11-JAN-17 5HQ4 0 JRNL AUTH C.HE,J.LI,W.LI,Y.XUE,Z.FANG,W.FANG,X.ZHANG,X.WANG,Y.XIAO JRNL TITL STRUCTURES OF PSPAG97A ALPHA-GLUCOSIDE HYDROLASE REVEAL A JRNL TITL 2 NOVEL MECHANISM FOR CHLORIDE INDUCED ACTIVATION. JRNL REF J. STRUCT. BIOL. V. 196 426 2016 JRNL REFN ESSN 1095-8657 JRNL PMID 27645700 JRNL DOI 10.1016/J.JSB.2016.09.009 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 113627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4979 - 5.9674 0.97 3741 206 0.1658 0.1879 REMARK 3 2 5.9674 - 4.7429 1.00 3724 181 0.1239 0.1224 REMARK 3 3 4.7429 - 4.1452 1.00 3687 185 0.1013 0.1155 REMARK 3 4 4.1452 - 3.7670 0.99 3630 186 0.1186 0.1210 REMARK 3 5 3.7670 - 3.4975 0.99 3627 208 0.1261 0.1438 REMARK 3 6 3.4975 - 3.2916 0.99 3637 189 0.1318 0.1474 REMARK 3 7 3.2916 - 3.1269 1.00 3647 186 0.1309 0.1519 REMARK 3 8 3.1269 - 2.9909 1.00 3620 175 0.1369 0.1537 REMARK 3 9 2.9909 - 2.8759 1.00 3606 189 0.1344 0.1698 REMARK 3 10 2.8759 - 2.7767 1.00 3667 190 0.1356 0.1452 REMARK 3 11 2.7767 - 2.6900 1.00 3616 194 0.1425 0.1668 REMARK 3 12 2.6900 - 2.6131 0.99 3575 175 0.1462 0.1415 REMARK 3 13 2.6131 - 2.5444 1.00 3582 207 0.1328 0.1465 REMARK 3 14 2.5444 - 2.4823 1.00 3603 197 0.1424 0.1710 REMARK 3 15 2.4823 - 2.4259 1.00 3631 184 0.1442 0.1841 REMARK 3 16 2.4259 - 2.3743 1.00 3570 220 0.1451 0.1789 REMARK 3 17 2.3743 - 2.3268 1.00 3592 192 0.1454 0.1646 REMARK 3 18 2.3268 - 2.2830 1.00 3590 204 0.1550 0.1787 REMARK 3 19 2.2830 - 2.2422 0.96 3478 159 0.2545 0.2697 REMARK 3 20 2.2422 - 2.2042 0.99 3548 182 0.1884 0.1993 REMARK 3 21 2.2042 - 2.1687 1.00 3589 209 0.1384 0.1576 REMARK 3 22 2.1687 - 2.1353 1.00 3557 187 0.1366 0.1581 REMARK 3 23 2.1353 - 2.1039 1.00 3643 165 0.1403 0.1705 REMARK 3 24 2.1039 - 2.0743 1.00 3578 179 0.1692 0.1716 REMARK 3 25 2.0743 - 2.0463 0.95 3436 188 0.2346 0.2236 REMARK 3 26 2.0463 - 2.0197 1.00 3530 213 0.1506 0.1726 REMARK 3 27 2.0197 - 1.9944 1.00 3603 194 0.1370 0.1575 REMARK 3 28 1.9944 - 1.9704 1.00 3573 202 0.1453 0.1599 REMARK 3 29 1.9704 - 1.9475 1.00 3592 177 0.1768 0.2204 REMARK 3 30 1.9475 - 1.9256 0.97 3474 158 0.2409 0.2464 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5530 REMARK 3 ANGLE : 0.824 7518 REMARK 3 CHIRALITY : 0.057 788 REMARK 3 PLANARITY : 0.005 983 REMARK 3 DIHEDRAL : 13.800 3224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 20 THROUGH 276) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0063 -12.3130 14.6506 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.0844 REMARK 3 T33: 0.1219 T12: -0.0491 REMARK 3 T13: 0.0133 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.4137 L22: 0.7346 REMARK 3 L33: 0.6281 L12: 0.2157 REMARK 3 L13: 0.0097 L23: 0.0896 REMARK 3 S TENSOR REMARK 3 S11: -0.0844 S12: 0.0364 S13: -0.0552 REMARK 3 S21: -0.0540 S22: 0.0462 S23: 0.0374 REMARK 3 S31: 0.1064 S32: -0.1041 S33: 0.0275 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 277 THROUGH 585) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3378 16.2655 4.8472 REMARK 3 T TENSOR REMARK 3 T11: 0.1896 T22: 0.0860 REMARK 3 T33: 0.1284 T12: -0.0234 REMARK 3 T13: -0.0299 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.7485 L22: 0.4861 REMARK 3 L33: 0.5484 L12: 0.0467 REMARK 3 L13: -0.2487 L23: -0.0445 REMARK 3 S TENSOR REMARK 3 S11: -0.0386 S12: 0.1082 S13: 0.1330 REMARK 3 S21: -0.1095 S22: 0.0633 S23: 0.0420 REMARK 3 S31: -0.1291 S32: -0.0945 S33: -0.0271 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 586 THROUGH 681) REMARK 3 ORIGIN FOR THE GROUP (A): 68.3930 3.7475 -6.3610 REMARK 3 T TENSOR REMARK 3 T11: 0.2327 T22: 0.1098 REMARK 3 T33: 0.1500 T12: -0.0710 REMARK 3 T13: 0.0617 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.8689 L22: 1.0053 REMARK 3 L33: 1.6866 L12: 0.4925 REMARK 3 L13: 0.2393 L23: 0.3706 REMARK 3 S TENSOR REMARK 3 S11: -0.1069 S12: 0.1750 S13: -0.0635 REMARK 3 S21: -0.2826 S22: 0.1176 S23: -0.1802 REMARK 3 S31: -0.0341 S32: 0.1178 S33: -0.0022 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 113895 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2D73 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS-HCL (PH 5.5), 0.3M REMARK 280 MAGNESIUM FORMATE DIHYDRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.83800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.91900 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.91900 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 121.83800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1710 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 682 REMARK 465 HIS A 683 REMARK 465 HIS A 684 REMARK 465 HIS A 685 REMARK 465 HIS A 686 REMARK 465 HIS A 687 REMARK 465 HIS A 688 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 681 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 68 -98.42 -135.23 REMARK 500 ASN A 140 -122.18 -111.11 REMARK 500 ARG A 171 -126.75 63.31 REMARK 500 ARG A 219 -113.11 -96.73 REMARK 500 ASN A 272 124.02 -37.80 REMARK 500 TRP A 289 -66.96 -164.13 REMARK 500 GLU A 474 -97.94 -94.66 REMARK 500 ALA A 476 164.39 177.73 REMARK 500 TRP A 484 13.29 -148.35 REMARK 500 PRO A 488 -179.42 -69.58 REMARK 500 THR A 500 -91.28 -128.85 REMARK 500 ASP A 585 -53.76 -123.44 REMARK 500 ARG A 596 138.40 -174.48 REMARK 500 ASP A 597 -121.30 57.68 REMARK 500 ASP A 611 -141.03 -93.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1722 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A1723 DISTANCE = 6.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 706 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 173 OE1 REMARK 620 2 GLU A 456 OE2 105.2 REMARK 620 3 GLU A 474 OE1 72.2 90.7 REMARK 620 4 GLU A 480 OE2 88.5 165.9 90.6 REMARK 620 5 HOH A 939 O 78.3 91.3 149.9 94.5 REMARK 620 6 HOH A 995 O 149.6 78.7 77.7 87.9 132.1 REMARK 620 7 HOH A1292 O 126.4 95.0 157.7 78.8 51.7 82.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 709 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 584 O REMARK 620 2 ASP A 585 OD2 88.3 REMARK 620 3 ASP A 611 OD1 95.8 92.5 REMARK 620 4 HOH A 928 O 92.9 171.7 95.6 REMARK 620 5 HOH A1033 O 177.1 93.9 82.2 85.3 REMARK 620 6 HOH A1135 O 91.1 85.3 172.7 86.4 91.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 712 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HQA RELATED DB: PDB REMARK 900 RELATED ID: 5HQB RELATED DB: PDB REMARK 900 RELATED ID: 5HQC RELATED DB: PDB DBREF1 5HQ4 A 20 680 UNP A0A0Y0DFX2_9GAMM DBREF2 5HQ4 A A0A0Y0DFX2 20 680 SEQADV 5HQ4 LEU A 681 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 GLU A 682 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 683 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 684 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 685 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 686 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 687 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQ4 HIS A 688 UNP A0A0Y0DFX EXPRESSION TAG SEQRES 1 A 669 ALA THR VAL GLN SER PRO ASP GLY ASN ILE LYS ILE ILE SEQRES 2 A 669 ILE SER ASP GLU GLN SER THR PRO SER TYR SER ILE SER SEQRES 3 A 669 PHE LYS ASN LYS THR VAL ILE ASN ASN SER ALA LEU GLY SEQRES 4 A 669 PHE GLU PHE LYS GLN HIS ALA PRO PHE SER ASN SER PHE SEQRES 5 A 669 LYS ILE THR LYS VAL GLN GLN GLN SER THR ASN THR GLN SEQRES 6 A 669 TRP GLN GLN PRO TRP GLY GLU ARG GLN THR VAL VAL ASP SEQRES 7 A 669 GLN HIS ASN GLU VAL THR VAL THR PHE ALA LYS PRO GLN SEQRES 8 A 669 PRO GLN GLY GLY THR TYR SER VAL ARG PHE LYS ALA PHE SEQRES 9 A 669 ASP SER GLY VAL GLY PHE ARG TYR GLU VAL PRO LYS GLN SEQRES 10 A 669 ALA GLY LEU ASN ASN ILE GLU ILE THR LYS GLU LEU THR SEQRES 11 A 669 GLU PHE ALA VAL ASN ASN SER HIS THR ALA THR ALA TRP SEQRES 12 A 669 TRP ILE PRO ALA ARG GLY TRP ASN ARG TYR GLU TYR VAL SEQRES 13 A 669 TYR ASN THR THR PRO LEU ASN ASP ALA ALA LEU VAL HIS SEQRES 14 A 669 THR PRO PHE THR PHE LYS ASN GLN ASP GLY VAL HIS ILE SEQRES 15 A 669 SER ILE HIS GLU ALA ALA LEU VAL ASP TYR ALA ALA MET SEQRES 16 A 669 VAL LEU ASN GLN ARG ARG PRO GLY VAL PHE GLN ALA ASP SEQRES 17 A 669 LEU THR PRO TRP SER SER GLY VAL ALA VAL LYS LYS GLN SEQRES 18 A 669 GLY ALA PHE ASN THR PRO TRP ARG THR ILE GLN ILE GLY SEQRES 19 A 669 GLU LYS ALA VAL ASP LEU VAL ASN SER ASP ILE ILE LEU SEQRES 20 A 669 ASN LEU ASN GLU PRO ASN LYS LEU GLY ASP VAL SER TRP SEQRES 21 A 669 VAL LYS PRO GLY LYS TYR ILE GLY ILE TRP TRP GLY MET SEQRES 22 A 669 HIS ILE ASN THR HIS THR TRP GLY SER GLY ASP LYS HIS SEQRES 23 A 669 GLY ALA THR THR LYS ASN THR LYS TYR TYR MET ASP PHE SEQRES 24 A 669 ALA ALA LYS TYR GLY PHE ASP GLY VAL LEU VAL GLU GLY SEQRES 25 A 669 TRP ASN THR GLY TRP ASP GLY ASP TRP PHE PHE ASN GLY SEQRES 26 A 669 ASP VAL PHE SER PHE THR GLN PRO TYR ASP ASP PHE ASP SEQRES 27 A 669 ILE ALA ALA LEU THR LYS TYR SER LYS GLN THR GLY VAL SEQRES 28 A 669 GLN LEU ILE GLY HIS HIS GLU THR SER GLY ASN VAL SER SEQRES 29 A 669 ASN TYR ARG LYS GLN MET ALA ASP ALA PHE ALA LEU TYR SEQRES 30 A 669 GLU LYS SER ASN VAL SER GLN VAL LYS THR GLY TYR VAL SEQRES 31 A 669 ALA ASP GLY GLY ASN ILE LYS ARG ILE ASP LYS ASN GLY SEQRES 32 A 669 ILE ALA ARG HIS GLU TRP HIS ASP GLY GLN PHE MET VAL SEQRES 33 A 669 ASN GLU TYR LEU HIS ASN VAL LYS LEU ALA ALA LYS HIS SEQRES 34 A 669 LYS ILE SER ILE ASN THR HIS GLU PRO ILE LYS ASP THR SEQRES 35 A 669 GLY LEU ARG ARG THR TYR PRO ASN TRP ILE THR ARG GLU SEQRES 36 A 669 GLY ALA ARG GLY GLN GLU PHE ASN ALA TRP GLY THR PRO SEQRES 37 A 669 PRO ASN PRO PRO GLU HIS ILE SER MET LEU ALA PHE THR SEQRES 38 A 669 ARG MET LEU ALA GLY PRO MET ASP PHE THR PRO GLY ILE SEQRES 39 A 669 PHE ASP LEU SER PHE ASN GLY LEU GLY ALA ASN THR ASN SEQRES 40 A 669 ARG PRO GLN THR THR LEU ALA LYS GLN LEU ALA LEU TYR SEQRES 41 A 669 VAL VAL LEU TYR SER PRO ILE GLN MET ALA ALA ASP LEU SEQRES 42 A 669 PRO LYS ASN TYR LEU ALA LYS PRO ASP ALA PHE GLN PHE SEQRES 43 A 669 ILE GLN ASP VAL PRO THR ASP TRP GLN GLN SER ILE ALA SEQRES 44 A 669 LEU ASP GLY ALA VAL GLY ASP PHE ILE VAL PHE ALA ARG SEQRES 45 A 669 LYS GLU ARG LYS ARG ASP LYS TYR THR GLY ASN ASP TRP SEQRES 46 A 669 TYR LEU GLY ALA VAL THR ASP GLU GLN ALA ARG THR ILE SEQRES 47 A 669 GLU ILE SER LEU ASP PHE LEU ASP ASN GLY LYS GLN PHE SEQRES 48 A 669 GLU ALA HIS ILE TYR LYS ASP GLY LYS ASN ALA GLU TRP SEQRES 49 A 669 LYS ASN ASN PRO TYR ASP LEU THR ILE GLU LYS ARG LEU SEQRES 50 A 669 VAL THR ALA SER ASP LYS LEU THR LEU LYS LEU ALA THR SEQRES 51 A 669 SER GLY GLY THR ALA ILE ARG PHE LYS ALA LEU LEU GLU SEQRES 52 A 669 HIS HIS HIS HIS HIS HIS HET GOL A 701 6 HET GOL A 702 6 HET GOL A 703 6 HET GOL A 704 6 HET GOL A 705 6 HET CA A 706 1 HET CL A 707 1 HET CL A 708 1 HET MG A 709 1 HET FMT A 710 3 HET FMT A 711 3 HET FMT A 712 3 HET UNX A 713 1 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID HETNAM UNX UNKNOWN ATOM OR ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 5(C3 H8 O3) FORMUL 7 CA CA 2+ FORMUL 8 CL 2(CL 1-) FORMUL 10 MG MG 2+ FORMUL 11 FMT 3(C H2 O2) FORMUL 14 UNX X FORMUL 15 HOH *923(H2 O) HELIX 1 AA1 ASN A 155 THR A 158 5 4 HELIX 2 AA2 ASN A 182 ALA A 184 5 3 HELIX 3 AA3 LYS A 255 ASN A 261 1 7 HELIX 4 AA4 ASP A 263 LEU A 268 1 6 HELIX 5 AA5 TRP A 289 ILE A 294 1 6 HELIX 6 AA6 THR A 308 GLY A 323 1 16 HELIX 7 AA7 ASP A 339 ASN A 343 5 5 HELIX 8 AA8 ASP A 357 GLY A 369 1 13 HELIX 9 AA9 ASN A 381 SER A 399 1 19 HELIX 10 AB1 GLY A 431 HIS A 448 1 18 HELIX 11 AB2 GLU A 480 GLY A 485 1 6 HELIX 12 AB3 GLU A 492 ALA A 498 1 7 HELIX 13 AB4 PHE A 499 ALA A 504 5 6 HELIX 14 AB5 THR A 531 LEU A 542 1 12 HELIX 15 AB6 LEU A 552 ALA A 558 1 7 HELIX 16 AB7 LYS A 559 VAL A 569 1 11 SHEET 1 AA1 8 THR A 21 GLN A 23 0 SHEET 2 AA1 8 ILE A 29 SER A 34 -1 O ILE A 31 N VAL A 22 SHEET 3 AA1 8 SER A 41 PHE A 46 -1 O SER A 41 N SER A 34 SHEET 4 AA1 8 LYS A 49 ALA A 56 -1 O LYS A 49 N PHE A 46 SHEET 5 AA1 8 GLU A 150 VAL A 153 -1 O ALA A 152 N ASN A 53 SHEET 6 AA1 8 VAL A 223 LEU A 228 -1 O PHE A 224 N PHE A 151 SHEET 7 AA1 8 MET A 214 GLN A 218 -1 N ASN A 217 O GLN A 225 SHEET 8 AA1 8 LEU A 186 VAL A 187 -1 N VAL A 187 O LEU A 216 SHEET 1 AA2 3 PHE A 59 PHE A 61 0 SHEET 2 AA2 3 ASN A 141 GLU A 147 -1 O LYS A 146 N GLU A 60 SHEET 3 AA2 3 VAL A 237 GLN A 240 -1 O LYS A 239 N ILE A 142 SHEET 1 AA3 9 LYS A 72 GLN A 86 0 SHEET 2 AA3 9 THR A 94 LYS A 108 -1 O VAL A 95 N TRP A 85 SHEET 3 AA3 9 GLY A 114 PHE A 123 -1 O PHE A 120 N VAL A 102 SHEET 4 AA3 9 GLY A 126 VAL A 133 -1 O GLY A 126 N PHE A 123 SHEET 5 AA3 9 TRP A 247 GLY A 253 -1 O ARG A 248 N PHE A 129 SHEET 6 AA3 9 HIS A 200 ALA A 206 -1 N SER A 202 O GLN A 251 SHEET 7 AA3 9 PHE A 191 LYS A 194 -1 N PHE A 193 O ILE A 201 SHEET 8 AA3 9 THR A 160 TRP A 163 -1 N THR A 160 O LYS A 194 SHEET 9 AA3 9 ASN A 177 PRO A 180 -1 O ASN A 177 N TRP A 163 SHEET 1 AA4 5 LYS A 72 GLN A 86 0 SHEET 2 AA4 5 THR A 94 LYS A 108 -1 O VAL A 95 N TRP A 85 SHEET 3 AA4 5 GLY A 114 PHE A 123 -1 O PHE A 120 N VAL A 102 SHEET 4 AA4 5 GLY A 126 VAL A 133 -1 O GLY A 126 N PHE A 123 SHEET 5 AA4 5 PHE A 243 ASN A 244 -1 O PHE A 243 N VAL A 133 SHEET 1 AA5 7 TRP A 470 ARG A 473 0 SHEET 2 AA5 7 SER A 451 THR A 454 1 N THR A 454 O THR A 472 SHEET 3 AA5 7 GLN A 403 GLY A 407 1 N VAL A 404 O SER A 451 SHEET 4 AA5 7 GLN A 371 GLU A 377 1 N HIS A 376 O LYS A 405 SHEET 5 AA5 7 GLY A 326 VAL A 329 1 N VAL A 327 O ILE A 373 SHEET 6 AA5 7 GLY A 283 ILE A 288 1 N ILE A 288 O LEU A 328 SHEET 7 AA5 7 ILE A 546 MET A 548 1 O GLN A 547 N TYR A 285 SHEET 1 AA6 2 ILE A 415 ILE A 418 0 SHEET 2 AA6 2 ALA A 424 GLU A 427 -1 O ARG A 425 N ARG A 417 SHEET 1 AA7 6 TRP A 573 ALA A 582 0 SHEET 2 AA7 6 PHE A 586 GLU A 593 -1 O LYS A 592 N GLN A 574 SHEET 3 AA7 6 TRP A 604 THR A 610 -1 O GLY A 607 N PHE A 589 SHEET 4 AA7 6 GLY A 672 ALA A 679 -1 O PHE A 677 N TRP A 604 SHEET 5 AA7 6 PHE A 630 ASP A 637 -1 N TYR A 635 O ALA A 674 SHEET 6 AA7 6 LEU A 650 VAL A 657 -1 O ARG A 655 N ALA A 632 SHEET 1 AA8 2 ARG A 615 SER A 620 0 SHEET 2 AA8 2 LYS A 662 LEU A 667 -1 O LEU A 665 N ILE A 617 LINK OE1 GLU A 173 CA CA A 706 1555 1555 2.49 LINK OE2 GLU A 456 CA CA A 706 1555 1555 2.35 LINK OE1 GLU A 474 CA CA A 706 1555 1555 2.38 LINK OE2 GLU A 480 CA CA A 706 1555 1555 2.34 LINK O GLY A 584 MG MG A 709 1555 1555 2.03 LINK OD2 ASP A 585 MG MG A 709 1555 1555 2.11 LINK OD1 ASP A 611 MG MG A 709 1555 1555 2.10 LINK CA CA A 706 O HOH A 939 1555 1555 2.39 LINK CA CA A 706 O HOH A 995 1555 1555 2.39 LINK CA CA A 706 O HOH A1292 1555 1555 3.08 LINK MG MG A 709 O HOH A 928 1555 1555 2.05 LINK MG MG A 709 O HOH A1033 1555 1555 2.08 LINK MG MG A 709 O HOH A1135 1555 1555 2.05 CISPEP 1 GLN A 110 PRO A 111 0 2.25 CISPEP 2 THR A 189 PRO A 190 0 3.32 CISPEP 3 THR A 486 PRO A 487 0 7.66 SITE 1 AC1 11 TRP A 289 HIS A 293 TRP A 299 GLU A 330 SITE 2 AC1 11 TRP A 340 HIS A 375 GLU A 377 VAL A 409 SITE 3 AC1 11 HOH A 845 HOH A 960 HOH A1292 SITE 1 AC2 6 GLN A 77 GLN A 79 THR A 103 ARG A 119 SITE 2 AC2 6 LYS A 639 HOH A1162 SITE 1 AC3 6 ALA A 20 THR A 21 ILE A 32 ASP A 561 SITE 2 AC3 6 HOH A 926 HOH A1035 SITE 1 AC4 3 ARG A 220 ASP A 339 HOH A1401 SITE 1 AC5 6 ASN A 436 LEU A 439 HIS A 440 LYS A 443 SITE 2 AC5 6 HOH A 869 HOH A1177 SITE 1 AC6 7 GLU A 173 GLU A 456 GLU A 474 GLU A 480 SITE 2 AC6 7 HOH A 939 HOH A 995 HOH A1292 SITE 1 AC7 3 ARG A 171 TYR A 172 GLU A 173 SITE 1 AC8 2 ASN A 482 ASN A 489 SITE 1 AC9 6 GLY A 584 ASP A 585 ASP A 611 HOH A 928 SITE 2 AC9 6 HOH A1033 HOH A1135 SITE 1 AD1 6 LYS A 146 ASN A 217 TRP A 428 HOH A 803 SITE 2 AD1 6 HOH A 916 HOH A1213 SITE 1 AD2 5 ASP A 637 GLY A 638 LYS A 666 HOH A 935 SITE 2 AD2 5 HOH A1226 SITE 1 AD3 5 SER A 43 ILE A 44 SER A 45 THR A 50 SITE 2 AD3 5 HOH A 817 CRYST1 119.545 119.545 182.757 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008365 0.004830 0.000000 0.00000 SCALE2 0.000000 0.009659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005472 0.00000