HEADER HYDROLASE 21-JAN-16 5HQA TITLE A GLYCOSIDE HYDROLASE FAMILY 97 ENZYME IN COMPLEX WITH ACARBOSE FROM TITLE 2 PSEUDOALTEROMONAS SP. STRAIN K8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 20-680; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOALTEROMONAS SP. K8; SOURCE 3 ORGANISM_TAXID: 1719649; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22 KEYWDS GLUCOSIDE HYDROLASE, FAMILY 97, CHLORIDE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LI,C.HE,Y.XIAO REVDAT 3 08-NOV-23 5HQA 1 HETSYN REVDAT 2 29-JUL-20 5HQA 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 11-JAN-17 5HQA 0 JRNL AUTH C.HE,J.LI,W.LI,Y.XUE,Z.FANG,W.FANG,X.ZHANG,X.WANG,Y.XIAO JRNL TITL STRUCTURES OF PSPAG97A ALPHA-GLUCOSIDE HYDROLASE REVEAL A JRNL TITL 2 NOVEL MECHANISM FOR CHLORIDE INDUCED ACTIVATION. JRNL REF J. STRUCT. BIOL. V. 196 426 2016 JRNL REFN ESSN 1095-8657 JRNL PMID 27645700 JRNL DOI 10.1016/J.JSB.2016.09.009 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : LS_WUNIT_K1 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 151800 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 7628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3950 - 5.4231 0.99 5087 264 0.1412 0.1506 REMARK 3 2 5.4231 - 4.3062 1.00 4928 280 0.0938 0.1188 REMARK 3 3 4.3062 - 3.7623 0.99 4848 283 0.1018 0.1348 REMARK 3 4 3.7623 - 3.4186 1.00 4854 264 0.1136 0.1373 REMARK 3 5 3.4186 - 3.1736 1.00 4870 253 0.1141 0.1349 REMARK 3 6 3.1736 - 2.9866 1.00 4845 242 0.1274 0.1570 REMARK 3 7 2.9866 - 2.8371 1.00 4836 253 0.1273 0.1569 REMARK 3 8 2.8371 - 2.7136 1.00 4838 261 0.1392 0.1605 REMARK 3 9 2.7136 - 2.6092 1.00 4844 233 0.1540 0.1908 REMARK 3 10 2.6092 - 2.5191 1.00 4840 251 0.1443 0.1665 REMARK 3 11 2.5191 - 2.4404 1.00 4817 233 0.1449 0.1699 REMARK 3 12 2.4404 - 2.3706 1.00 4802 258 0.1490 0.1641 REMARK 3 13 2.3706 - 2.3082 1.00 4784 264 0.1455 0.1635 REMARK 3 14 2.3082 - 2.2519 1.00 4748 268 0.1568 0.1685 REMARK 3 15 2.2519 - 2.2007 0.99 4847 216 0.1722 0.1908 REMARK 3 16 2.2007 - 2.1539 1.00 4804 236 0.1385 0.1543 REMARK 3 17 2.1539 - 2.1108 1.00 4821 242 0.1472 0.1743 REMARK 3 18 2.1108 - 2.0710 1.00 4764 233 0.1640 0.1747 REMARK 3 19 2.0710 - 2.0340 0.98 4714 241 0.2030 0.2193 REMARK 3 20 2.0340 - 1.9995 1.00 4733 259 0.1559 0.1709 REMARK 3 21 1.9995 - 1.9673 1.00 4782 272 0.1566 0.1684 REMARK 3 22 1.9673 - 1.9370 1.00 4817 257 0.1886 0.2082 REMARK 3 23 1.9370 - 1.9085 0.98 4631 253 0.2742 0.3222 REMARK 3 24 1.9085 - 1.8816 0.99 4764 240 0.2173 0.2384 REMARK 3 25 1.8816 - 1.8562 1.00 4761 279 0.1944 0.2089 REMARK 3 26 1.8562 - 1.8321 1.00 4718 250 0.1701 0.1822 REMARK 3 27 1.8321 - 1.8092 1.00 4770 278 0.1724 0.1798 REMARK 3 28 1.8092 - 1.7874 1.00 4763 250 0.1774 0.1655 REMARK 3 29 1.7874 - 1.7666 1.00 4843 228 0.1836 0.1880 REMARK 3 30 1.7666 - 1.7468 1.00 4699 287 0.1870 0.1845 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5631 REMARK 3 ANGLE : 0.868 7679 REMARK 3 CHIRALITY : 0.056 821 REMARK 3 PLANARITY : 0.005 999 REMARK 3 DIHEDRAL : 13.818 3257 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 20 THROUGH 276) REMARK 3 ORIGIN FOR THE GROUP (A): 162.2200 -12.4607 14.6898 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.0864 REMARK 3 T33: 0.1151 T12: -0.0513 REMARK 3 T13: 0.0147 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.4066 L22: 0.7023 REMARK 3 L33: 0.6056 L12: 0.2511 REMARK 3 L13: -0.0142 L23: 0.0664 REMARK 3 S TENSOR REMARK 3 S11: -0.0986 S12: 0.0396 S13: -0.0536 REMARK 3 S21: -0.0618 S22: 0.0542 S23: 0.0328 REMARK 3 S31: 0.1035 S32: -0.1157 S33: 0.0318 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 277 THROUGH 585) REMARK 3 ORIGIN FOR THE GROUP (A): 166.5619 16.2484 4.8662 REMARK 3 T TENSOR REMARK 3 T11: 0.1912 T22: 0.0858 REMARK 3 T33: 0.1212 T12: -0.0270 REMARK 3 T13: -0.0328 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.6754 L22: 0.4724 REMARK 3 L33: 0.5858 L12: 0.0556 REMARK 3 L13: -0.2325 L23: -0.0488 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: 0.1095 S13: 0.1279 REMARK 3 S21: -0.1099 S22: 0.0681 S23: 0.0383 REMARK 3 S31: -0.1315 S32: -0.0999 S33: -0.0289 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 586 THROUGH 681) REMARK 3 ORIGIN FOR THE GROUP (A): 187.7258 3.6177 -6.5250 REMARK 3 T TENSOR REMARK 3 T11: 0.2363 T22: 0.1157 REMARK 3 T33: 0.1482 T12: -0.0770 REMARK 3 T13: 0.0560 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.6480 L22: 0.8658 REMARK 3 L33: 1.7457 L12: 0.3994 REMARK 3 L13: 0.2212 L23: 0.3942 REMARK 3 S TENSOR REMARK 3 S11: -0.1136 S12: 0.1442 S13: -0.0751 REMARK 3 S21: -0.2682 S22: 0.1251 S23: -0.1873 REMARK 3 S31: -0.0260 S32: 0.1153 S33: -0.0126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HQA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 152213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 0.45700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5HQ4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS-HCL (PH 5.5), 0.3M REMARK 280 MAGNESIUM FORMATE DIHYDRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.61200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.80600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.80600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 121.61200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 923 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1821 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 682 REMARK 465 HIS A 683 REMARK 465 HIS A 684 REMARK 465 HIS A 685 REMARK 465 HIS A 686 REMARK 465 HIS A 687 REMARK 465 HIS A 688 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1385 O HOH A 1696 2.17 REMARK 500 NZ LYS A 47 OE1 GLU A 254 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 68 -100.05 -133.73 REMARK 500 SER A 68 -100.44 -132.30 REMARK 500 ASN A 140 -119.68 -112.44 REMARK 500 ARG A 171 -125.26 63.45 REMARK 500 ARG A 219 -110.20 -96.37 REMARK 500 ASN A 272 123.72 -38.50 REMARK 500 TRP A 289 -69.57 -161.84 REMARK 500 GLU A 474 -98.09 -92.02 REMARK 500 ALA A 476 165.01 178.87 REMARK 500 TRP A 484 11.99 -148.93 REMARK 500 THR A 500 -91.01 -130.43 REMARK 500 THR A 510 71.10 53.34 REMARK 500 ASP A 585 -54.82 -123.09 REMARK 500 ARG A 596 139.11 -176.73 REMARK 500 ASP A 597 -128.29 59.05 REMARK 500 ASP A 611 -141.57 -94.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1830 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1831 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A1832 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A1833 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A1834 DISTANCE = 6.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 173 OE1 REMARK 620 2 GLU A 456 OE2 101.1 REMARK 620 3 GLU A 474 OE1 73.2 90.0 REMARK 620 4 GLU A 480 OE2 89.4 169.4 94.9 REMARK 620 5 AC1 B 3 O2B 150.0 86.8 77.9 85.0 REMARK 620 6 AC1 B 3 O3 73.6 82.4 143.7 99.0 136.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 704 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 584 O REMARK 620 2 ASP A 585 OD1 88.2 REMARK 620 3 ASP A 611 OD2 95.1 91.0 REMARK 620 4 HOH A 893 O 92.8 173.5 95.2 REMARK 620 5 HOH A1081 O 178.7 91.8 83.5 87.3 REMARK 620 6 HOH A1159 O 90.7 86.1 173.4 87.5 90.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HQ4 RELATED DB: PDB REMARK 900 RELATED ID: 5HQB RELATED DB: PDB REMARK 900 RELATED ID: 5HQC RELATED DB: PDB DBREF1 5HQA A 20 680 UNP A0A0Y0DFX2_9GAMM DBREF2 5HQA A A0A0Y0DFX2 20 680 SEQADV 5HQA LEU A 681 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA GLU A 682 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 683 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 684 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 685 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 686 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 687 UNP A0A0Y0DFX EXPRESSION TAG SEQADV 5HQA HIS A 688 UNP A0A0Y0DFX EXPRESSION TAG SEQRES 1 A 669 ALA THR VAL GLN SER PRO ASP GLY ASN ILE LYS ILE ILE SEQRES 2 A 669 ILE SER ASP GLU GLN SER THR PRO SER TYR SER ILE SER SEQRES 3 A 669 PHE LYS ASN LYS THR VAL ILE ASN ASN SER ALA LEU GLY SEQRES 4 A 669 PHE GLU PHE LYS GLN HIS ALA PRO PHE SER ASN SER PHE SEQRES 5 A 669 LYS ILE THR LYS VAL GLN GLN GLN SER THR ASN THR GLN SEQRES 6 A 669 TRP GLN GLN PRO TRP GLY GLU ARG GLN THR VAL VAL ASP SEQRES 7 A 669 GLN HIS ASN GLU VAL THR VAL THR PHE ALA LYS PRO GLN SEQRES 8 A 669 PRO GLN GLY GLY THR TYR SER VAL ARG PHE LYS ALA PHE SEQRES 9 A 669 ASP SER GLY VAL GLY PHE ARG TYR GLU VAL PRO LYS GLN SEQRES 10 A 669 ALA GLY LEU ASN ASN ILE GLU ILE THR LYS GLU LEU THR SEQRES 11 A 669 GLU PHE ALA VAL ASN ASN SER HIS THR ALA THR ALA TRP SEQRES 12 A 669 TRP ILE PRO ALA ARG GLY TRP ASN ARG TYR GLU TYR VAL SEQRES 13 A 669 TYR ASN THR THR PRO LEU ASN ASP ALA ALA LEU VAL HIS SEQRES 14 A 669 THR PRO PHE THR PHE LYS ASN GLN ASP GLY VAL HIS ILE SEQRES 15 A 669 SER ILE HIS GLU ALA ALA LEU VAL ASP TYR ALA ALA MET SEQRES 16 A 669 VAL LEU ASN GLN ARG ARG PRO GLY VAL PHE GLN ALA ASP SEQRES 17 A 669 LEU THR PRO TRP SER SER GLY VAL ALA VAL LYS LYS GLN SEQRES 18 A 669 GLY ALA PHE ASN THR PRO TRP ARG THR ILE GLN ILE GLY SEQRES 19 A 669 GLU LYS ALA VAL ASP LEU VAL ASN SER ASP ILE ILE LEU SEQRES 20 A 669 ASN LEU ASN GLU PRO ASN LYS LEU GLY ASP VAL SER TRP SEQRES 21 A 669 VAL LYS PRO GLY LYS TYR ILE GLY ILE TRP TRP GLY MET SEQRES 22 A 669 HIS ILE ASN THR HIS THR TRP GLY SER GLY ASP LYS HIS SEQRES 23 A 669 GLY ALA THR THR LYS ASN THR LYS TYR TYR MET ASP PHE SEQRES 24 A 669 ALA ALA LYS TYR GLY PHE ASP GLY VAL LEU VAL GLU GLY SEQRES 25 A 669 TRP ASN THR GLY TRP ASP GLY ASP TRP PHE PHE ASN GLY SEQRES 26 A 669 ASP VAL PHE SER PHE THR GLN PRO TYR ASP ASP PHE ASP SEQRES 27 A 669 ILE ALA ALA LEU THR LYS TYR SER LYS GLN THR GLY VAL SEQRES 28 A 669 GLN LEU ILE GLY HIS HIS GLU THR SER GLY ASN VAL SER SEQRES 29 A 669 ASN TYR ARG LYS GLN MET ALA ASP ALA PHE ALA LEU TYR SEQRES 30 A 669 GLU LYS SER ASN VAL SER GLN VAL LYS THR GLY TYR VAL SEQRES 31 A 669 ALA ASP GLY GLY ASN ILE LYS ARG ILE ASP LYS ASN GLY SEQRES 32 A 669 ILE ALA ARG HIS GLU TRP HIS ASP GLY GLN PHE MET VAL SEQRES 33 A 669 ASN GLU TYR LEU HIS ASN VAL LYS LEU ALA ALA LYS HIS SEQRES 34 A 669 LYS ILE SER ILE ASN THR HIS GLU PRO ILE LYS ASP THR SEQRES 35 A 669 GLY LEU ARG ARG THR TYR PRO ASN TRP ILE THR ARG GLU SEQRES 36 A 669 GLY ALA ARG GLY GLN GLU PHE ASN ALA TRP GLY THR PRO SEQRES 37 A 669 PRO ASN PRO PRO GLU HIS ILE SER MET LEU ALA PHE THR SEQRES 38 A 669 ARG MET LEU ALA GLY PRO MET ASP PHE THR PRO GLY ILE SEQRES 39 A 669 PHE ASP LEU SER PHE ASN GLY LEU GLY ALA ASN THR ASN SEQRES 40 A 669 ARG PRO GLN THR THR LEU ALA LYS GLN LEU ALA LEU TYR SEQRES 41 A 669 VAL VAL LEU TYR SER PRO ILE GLN MET ALA ALA ASP LEU SEQRES 42 A 669 PRO LYS ASN TYR LEU ALA LYS PRO ASP ALA PHE GLN PHE SEQRES 43 A 669 ILE GLN ASP VAL PRO THR ASP TRP GLN GLN SER ILE ALA SEQRES 44 A 669 LEU ASP GLY ALA VAL GLY ASP PHE ILE VAL PHE ALA ARG SEQRES 45 A 669 LYS GLU ARG LYS ARG ASP LYS TYR THR GLY ASN ASP TRP SEQRES 46 A 669 TYR LEU GLY ALA VAL THR ASP GLU GLN ALA ARG THR ILE SEQRES 47 A 669 GLU ILE SER LEU ASP PHE LEU ASP ASN GLY LYS GLN PHE SEQRES 48 A 669 GLU ALA HIS ILE TYR LYS ASP GLY LYS ASN ALA GLU TRP SEQRES 49 A 669 LYS ASN ASN PRO TYR ASP LEU THR ILE GLU LYS ARG LEU SEQRES 50 A 669 VAL THR ALA SER ASP LYS LEU THR LEU LYS LEU ALA THR SEQRES 51 A 669 SER GLY GLY THR ALA ILE ARG PHE LYS ALA LEU LEU GLU SEQRES 52 A 669 HIS HIS HIS HIS HIS HIS HET GLC B 1 12 HET GLC B 2 11 HET AC1 B 3 21 HET CA A 701 1 HET CL A 702 1 HET CL A 703 1 HET MG A 704 1 HET GOL A 706 6 HET GOL A 707 6 HET FMT A 708 3 HET FMT A 709 3 HET FMT A 710 3 HET FMT A 711 3 HET UNX A 712 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM AC1 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETNAM 2 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETNAM 3 AC1 GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM UNX UNKNOWN ATOM OR ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN AC1 6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX- HETSYN 2 AC1 2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL; 4,6- HETSYN 3 AC1 DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETSYN 4 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETSYN 5 AC1 GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 6 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 7 AC1 D-GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 8 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 9 AC1 GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GLC 2(C6 H12 O6) FORMUL 2 AC1 C13 H23 N O8 FORMUL 3 CA CA 2+ FORMUL 4 CL 2(CL 1-) FORMUL 6 MG MG 2+ FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 FMT 4(C H2 O2) FORMUL 13 UNX X FORMUL 14 HOH *1034(H2 O) HELIX 1 AA1 ASN A 155 THR A 158 5 4 HELIX 2 AA2 ASN A 182 ALA A 184 5 3 HELIX 3 AA3 LYS A 255 ASN A 261 1 7 HELIX 4 AA4 ASP A 263 LEU A 268 1 6 HELIX 5 AA5 TRP A 289 ILE A 294 1 6 HELIX 6 AA6 THR A 308 GLY A 323 1 16 HELIX 7 AA7 ASP A 339 ASN A 343 5 5 HELIX 8 AA8 ASP A 357 GLY A 369 1 13 HELIX 9 AA9 ASN A 381 SER A 399 1 19 HELIX 10 AB1 GLY A 431 HIS A 448 1 18 HELIX 11 AB2 GLU A 480 GLY A 485 1 6 HELIX 12 AB3 GLU A 492 ALA A 498 1 7 HELIX 13 AB4 THR A 500 GLY A 505 1 6 HELIX 14 AB5 THR A 531 LEU A 542 1 12 HELIX 15 AB6 LEU A 552 ALA A 558 1 7 HELIX 16 AB7 LYS A 559 VAL A 569 1 11 SHEET 1 AA1 8 THR A 21 GLN A 23 0 SHEET 2 AA1 8 ILE A 29 SER A 34 -1 O ILE A 31 N VAL A 22 SHEET 3 AA1 8 SER A 41 PHE A 46 -1 O SER A 41 N SER A 34 SHEET 4 AA1 8 LYS A 49 ALA A 56 -1 O LYS A 49 N PHE A 46 SHEET 5 AA1 8 GLU A 150 VAL A 153 -1 O ALA A 152 N ASN A 53 SHEET 6 AA1 8 VAL A 223 LEU A 228 -1 O PHE A 224 N PHE A 151 SHEET 7 AA1 8 MET A 214 GLN A 218 -1 N ASN A 217 O GLN A 225 SHEET 8 AA1 8 LEU A 186 VAL A 187 -1 N VAL A 187 O LEU A 216 SHEET 1 AA2 3 PHE A 59 PHE A 61 0 SHEET 2 AA2 3 ASN A 141 GLU A 147 -1 O LYS A 146 N GLU A 60 SHEET 3 AA2 3 VAL A 237 GLN A 240 -1 O VAL A 237 N ILE A 144 SHEET 1 AA3 9 LYS A 72 GLN A 86 0 SHEET 2 AA3 9 THR A 94 LYS A 108 -1 O ASP A 97 N THR A 83 SHEET 3 AA3 9 GLY A 114 PHE A 123 -1 O TYR A 116 N PHE A 106 SHEET 4 AA3 9 GLY A 126 VAL A 133 -1 O GLY A 126 N PHE A 123 SHEET 5 AA3 9 TRP A 247 GLY A 253 -1 O ARG A 248 N PHE A 129 SHEET 6 AA3 9 HIS A 200 ALA A 206 -1 N SER A 202 O GLN A 251 SHEET 7 AA3 9 PHE A 191 LYS A 194 -1 N PHE A 193 O ILE A 201 SHEET 8 AA3 9 THR A 160 TRP A 163 -1 N THR A 160 O LYS A 194 SHEET 9 AA3 9 ASN A 177 PRO A 180 -1 O ASN A 177 N TRP A 163 SHEET 1 AA4 5 LYS A 72 GLN A 86 0 SHEET 2 AA4 5 THR A 94 LYS A 108 -1 O ASP A 97 N THR A 83 SHEET 3 AA4 5 GLY A 114 PHE A 123 -1 O TYR A 116 N PHE A 106 SHEET 4 AA4 5 GLY A 126 VAL A 133 -1 O GLY A 126 N PHE A 123 SHEET 5 AA4 5 PHE A 243 ASN A 244 -1 O PHE A 243 N VAL A 133 SHEET 1 AA5 7 TRP A 470 ARG A 473 0 SHEET 2 AA5 7 SER A 451 THR A 454 1 N THR A 454 O THR A 472 SHEET 3 AA5 7 GLN A 403 GLY A 407 1 N VAL A 404 O SER A 451 SHEET 4 AA5 7 GLN A 371 GLU A 377 1 N GLY A 374 O LYS A 405 SHEET 5 AA5 7 GLY A 326 VAL A 329 1 N VAL A 327 O ILE A 373 SHEET 6 AA5 7 GLY A 283 ILE A 288 1 N ILE A 286 O LEU A 328 SHEET 7 AA5 7 ILE A 546 MET A 548 1 O GLN A 547 N TYR A 285 SHEET 1 AA6 2 ILE A 415 ILE A 418 0 SHEET 2 AA6 2 ALA A 424 GLU A 427 -1 O ARG A 425 N ARG A 417 SHEET 1 AA7 6 TRP A 573 ALA A 582 0 SHEET 2 AA7 6 PHE A 586 GLU A 593 -1 O ALA A 590 N ILE A 577 SHEET 3 AA7 6 TRP A 604 THR A 610 -1 O GLY A 607 N PHE A 589 SHEET 4 AA7 6 GLY A 672 ALA A 679 -1 O PHE A 677 N TRP A 604 SHEET 5 AA7 6 PHE A 630 ASP A 637 -1 N TYR A 635 O ALA A 674 SHEET 6 AA7 6 LEU A 650 VAL A 657 -1 O GLU A 653 N ILE A 634 SHEET 1 AA8 2 ARG A 615 SER A 620 0 SHEET 2 AA8 2 LYS A 662 LEU A 667 -1 O LEU A 665 N ILE A 617 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.40 LINK O4 GLC B 2 C1 AC1 B 3 1555 1555 1.39 LINK OE1 GLU A 173 CA CA A 701 1555 1555 2.44 LINK OE2 GLU A 456 CA CA A 701 1555 1555 2.43 LINK OE1 GLU A 474 CA CA A 701 1555 1555 2.30 LINK OE2 GLU A 480 CA CA A 701 1555 1555 2.31 LINK O GLY A 584 MG MG A 704 1555 1555 2.03 LINK OD1 ASP A 585 MG MG A 704 1555 1555 2.07 LINK OD2 ASP A 611 MG MG A 704 1555 1555 2.09 LINK CA CA A 701 O2B AC1 B 3 1555 1555 2.34 LINK CA CA A 701 O3 AC1 B 3 1555 1555 2.33 LINK MG MG A 704 O HOH A 893 1555 1555 2.03 LINK MG MG A 704 O HOH A1081 1555 1555 2.09 LINK MG MG A 704 O HOH A1159 1555 1555 2.08 CISPEP 1 GLN A 110 PRO A 111 0 1.72 CISPEP 2 THR A 189 PRO A 190 0 2.77 CISPEP 3 THR A 486 PRO A 487 0 7.05 CRYST1 119.383 119.383 182.418 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008376 0.004836 0.000000 0.00000 SCALE2 0.000000 0.009672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005482 0.00000