data_5HQH # _entry.id 5HQH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5HQH pdb_00005hqh 10.2210/pdb5hqh/pdb WWPDB D_1000217538 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id idp05762 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5HQH _pdbx_database_status.recvd_initial_deposition_date 2016-01-21 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Minasov, G.' 1 'Shuvalova, L.' 2 'Dubrovska, I.' 3 'Winsor, J.' 4 'Grimshaw, S.' 5 'Kwon, K.' 6 'Anderson, W.F.' 7 'Center for Structural Genomics of Infectious Diseases (CSGID)' 8 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title '1.32 Angstrom Crystal Structure of Ybbr like Domain of lmo2119 Protein from Listeria monocytogenes.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Minasov, G.' 1 ? primary 'Shuvalova, L.' 2 ? primary 'Dubrovska, I.' 3 ? primary 'Winsor, J.' 4 ? primary 'Grimshaw, S.' 5 ? primary 'Kwon, K.' 6 ? primary 'Anderson, W.F.' 7 ? primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 95.65 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5HQH _cell.details ? _cell.formula_units_Z ? _cell.length_a 22.577 _cell.length_a_esd ? _cell.length_b 28.819 _cell.length_b_esd ? _cell.length_c 59.733 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lmo2119 protein' 11905.333 1 ? ? 'UNP residues 38-143' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 164 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNATTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIGTQEVKLQVKDVS DRLKVKVNPATVNVNVQEKVTKKFSVDVE ; _entity_poly.pdbx_seq_one_letter_code_can ;SNATTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIGTQEVKLQVKDVS DRLKVKVNPATVNVNVQEKVTKKFSVDVE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier idp05762 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 THR n 1 5 THR n 1 6 SER n 1 7 SER n 1 8 SER n 1 9 ASP n 1 10 SER n 1 11 GLU n 1 12 VAL n 1 13 ILE n 1 14 GLU n 1 15 ASN n 1 16 VAL n 1 17 PRO n 1 18 VAL n 1 19 LYS n 1 20 VAL n 1 21 TYR n 1 22 TYR n 1 23 ASP n 1 24 LYS n 1 25 THR n 1 26 ASN n 1 27 LEU n 1 28 TYR n 1 29 ILE n 1 30 SER n 1 31 GLY n 1 32 ILE n 1 33 PRO n 1 34 GLU n 1 35 THR n 1 36 VAL n 1 37 THR n 1 38 VAL n 1 39 THR n 1 40 LEU n 1 41 SER n 1 42 GLY n 1 43 PRO n 1 44 ARG n 1 45 SER n 1 46 ILE n 1 47 VAL n 1 48 GLN n 1 49 SER n 1 50 ALA n 1 51 LYS n 1 52 ALA n 1 53 GLN n 1 54 GLN n 1 55 ASP n 1 56 PHE n 1 57 THR n 1 58 VAL n 1 59 TYR n 1 60 ALA n 1 61 ASP n 1 62 LEU n 1 63 LYS n 1 64 ASN n 1 65 ALA n 1 66 SER n 1 67 ILE n 1 68 GLY n 1 69 THR n 1 70 GLN n 1 71 GLU n 1 72 VAL n 1 73 LYS n 1 74 LEU n 1 75 GLN n 1 76 VAL n 1 77 LYS n 1 78 ASP n 1 79 VAL n 1 80 SER n 1 81 ASP n 1 82 ARG n 1 83 LEU n 1 84 LYS n 1 85 VAL n 1 86 LYS n 1 87 VAL n 1 88 ASN n 1 89 PRO n 1 90 ALA n 1 91 THR n 1 92 VAL n 1 93 ASN n 1 94 VAL n 1 95 ASN n 1 96 VAL n 1 97 GLN n 1 98 GLU n 1 99 LYS n 1 100 VAL n 1 101 THR n 1 102 LYS n 1 103 LYS n 1 104 PHE n 1 105 SER n 1 106 VAL n 1 107 ASP n 1 108 VAL n 1 109 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 109 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lmo2119 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-679 / EGD-e' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria monocytogenes serovar 1/2a' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 169963 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8Y5E5_LISMO _struct_ref.pdbx_db_accession Q8Y5E5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIGTQEVKLQVKDVSDRL KVKVNPATVNVNVQEKVTKKFSVDVE ; _struct_ref.pdbx_align_begin 38 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5HQH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8Y5E5 _struct_ref_seq.db_align_beg 38 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 143 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 39 _struct_ref_seq.pdbx_auth_seq_align_end 144 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5HQH SER A 1 ? UNP Q8Y5E5 ? ? 'expression tag' 36 1 1 5HQH ASN A 2 ? UNP Q8Y5E5 ? ? 'expression tag' 37 2 1 5HQH ALA A 3 ? UNP Q8Y5E5 ? ? 'expression tag' 38 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5HQH _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein: 7.2 mg/ml, 0.25M Sodium chloride, 0.1M Tris HCl (pH 8.3); Screen: Trap96 (D4), 0.2M NAD, 0.1M HEPES (pH 7.5), 25% (w/v) PEG 3350. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'C(111)' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Beryllium lenses' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 14.0 _reflns.entry_id 5HQH _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.32 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18244 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.6 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.050 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.32 _reflns_shell.d_res_low 1.34 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.512 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.32 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.40 _refine.aniso_B[2][2] -0.58 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.18 _refine.B_iso_max ? _refine.B_iso_mean 16.053 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.960 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5HQH _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.32 _refine.ls_d_res_low 29.72 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17262 _refine.ls_number_reflns_R_free 926 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.84 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16351 _refine.ls_R_factor_R_free 0.19230 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.16198 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4QDY _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.062 _refine.pdbx_overall_ESU_R_Free 0.064 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.104 _refine.overall_SU_ML 0.045 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 743 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 913 _refine_hist.d_res_high 1.32 _refine_hist.d_res_low 29.72 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.019 896 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 894 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.561 1.968 1237 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.829 3.000 2076 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.114 5.000 124 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 42.305 26.857 35 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.391 15.000 170 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.235 15.000 3 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 151 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.024 0.020 1063 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.020 0.020 184 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.742 0.921 460 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.743 0.919 459 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.188 1.377 596 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.187 1.380 597 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.204 1.084 436 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.206 1.078 433 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 1.892 1.545 636 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.676 10.228 1134 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.680 8.343 1023 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.320 _refine_ls_shell.d_res_low 1.354 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_R_work 1276 _refine_ls_shell.percent_reflns_obs 99.70 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.323 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.271 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5HQH _struct.title '1.32 Angstrom Crystal Structure of Ybbr like Domain of lmo2119 Protein from Listeria monocytogenes.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5HQH _struct_keywords.text 'Ybbr like domain, CSGID, Structural genomics, Center for Structural Genomics of Infectious Diseases, Unknown Function' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 43 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 54 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 78 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 89 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 88 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 123 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 89 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 124 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.91 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 75 ? LYS A 77 ? GLN A 110 LYS A 112 AA1 2 THR A 57 ? ASP A 61 ? THR A 92 ASP A 96 AA1 3 ASP A 9 ? TYR A 21 ? ASP A 44 TYR A 56 AA1 4 THR A 35 ? GLY A 42 ? THR A 70 GLY A 77 AA1 5 LYS A 84 ? ASN A 88 ? LYS A 119 ASN A 123 AA2 1 LEU A 27 ? SER A 30 ? LEU A 62 SER A 65 AA2 2 THR A 91 ? GLU A 98 ? THR A 126 GLU A 133 AA2 3 GLY A 68 ? LYS A 73 ? GLY A 103 LYS A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 75 ? O GLN A 110 N TYR A 59 ? N TYR A 94 AA1 2 3 O VAL A 58 ? O VAL A 93 N LYS A 19 ? N LYS A 54 AA1 3 4 N ILE A 13 ? N ILE A 48 O VAL A 38 ? O VAL A 73 AA1 4 5 N SER A 41 ? N SER A 76 O LYS A 84 ? O LYS A 119 AA2 1 2 N TYR A 28 ? N TYR A 63 O GLN A 97 ? O GLN A 132 AA2 2 3 O VAL A 94 ? O VAL A 129 N GLN A 70 ? N GLN A 105 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 2 'binding site for residue CL A 201' AC2 Software A SO4 202 ? 7 'binding site for residue SO4 A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 SER A 30 ? SER A 65 . ? 1_555 ? 2 AC1 2 ASN A 95 ? ASN A 130 . ? 1_555 ? 3 AC2 7 THR A 25 ? THR A 60 . ? 1_555 ? 4 AC2 7 ASN A 95 ? ASN A 130 . ? 1_655 ? 5 AC2 7 LYS A 99 ? LYS A 134 . ? 1_555 ? 6 AC2 7 HOH D . ? HOH A 335 . ? 1_555 ? 7 AC2 7 HOH D . ? HOH A 357 . ? 1_555 ? 8 AC2 7 HOH D . ? HOH A 421 . ? 1_555 ? 9 AC2 7 HOH D . ? HOH A 460 . ? 1_555 ? # _atom_sites.entry_id 5HQH _atom_sites.fract_transf_matrix[1][1] 0.044293 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004380 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034699 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016823 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 36 ? ? ? A . n A 1 2 ASN 2 37 ? ? ? A . n A 1 3 ALA 3 38 ? ? ? A . n A 1 4 THR 4 39 ? ? ? A . n A 1 5 THR 5 40 ? ? ? A . n A 1 6 SER 6 41 ? ? ? A . n A 1 7 SER 7 42 ? ? ? A . n A 1 8 SER 8 43 43 SER SER A . n A 1 9 ASP 9 44 44 ASP ASP A . n A 1 10 SER 10 45 45 SER SER A . n A 1 11 GLU 11 46 46 GLU GLU A . n A 1 12 VAL 12 47 47 VAL VAL A . n A 1 13 ILE 13 48 48 ILE ILE A . n A 1 14 GLU 14 49 49 GLU GLU A . n A 1 15 ASN 15 50 50 ASN ASN A . n A 1 16 VAL 16 51 51 VAL VAL A . n A 1 17 PRO 17 52 52 PRO PRO A . n A 1 18 VAL 18 53 53 VAL VAL A . n A 1 19 LYS 19 54 54 LYS LYS A . n A 1 20 VAL 20 55 55 VAL VAL A . n A 1 21 TYR 21 56 56 TYR TYR A . n A 1 22 TYR 22 57 57 TYR TYR A . n A 1 23 ASP 23 58 58 ASP ASP A . n A 1 24 LYS 24 59 59 LYS LYS A . n A 1 25 THR 25 60 60 THR THR A . n A 1 26 ASN 26 61 61 ASN ASN A . n A 1 27 LEU 27 62 62 LEU LEU A . n A 1 28 TYR 28 63 63 TYR TYR A . n A 1 29 ILE 29 64 64 ILE ILE A . n A 1 30 SER 30 65 65 SER SER A . n A 1 31 GLY 31 66 66 GLY GLY A . n A 1 32 ILE 32 67 67 ILE ILE A . n A 1 33 PRO 33 68 68 PRO PRO A . n A 1 34 GLU 34 69 69 GLU GLU A . n A 1 35 THR 35 70 70 THR THR A . n A 1 36 VAL 36 71 71 VAL VAL A . n A 1 37 THR 37 72 72 THR THR A . n A 1 38 VAL 38 73 73 VAL VAL A . n A 1 39 THR 39 74 74 THR THR A . n A 1 40 LEU 40 75 75 LEU LEU A . n A 1 41 SER 41 76 76 SER SER A . n A 1 42 GLY 42 77 77 GLY GLY A . n A 1 43 PRO 43 78 78 PRO PRO A . n A 1 44 ARG 44 79 79 ARG ARG A . n A 1 45 SER 45 80 80 SER SER A . n A 1 46 ILE 46 81 81 ILE ILE A . n A 1 47 VAL 47 82 82 VAL VAL A . n A 1 48 GLN 48 83 83 GLN GLN A . n A 1 49 SER 49 84 84 SER SER A . n A 1 50 ALA 50 85 85 ALA ALA A . n A 1 51 LYS 51 86 86 LYS LYS A . n A 1 52 ALA 52 87 87 ALA ALA A . n A 1 53 GLN 53 88 88 GLN GLN A . n A 1 54 GLN 54 89 89 GLN GLN A . n A 1 55 ASP 55 90 90 ASP ASP A . n A 1 56 PHE 56 91 91 PHE PHE A . n A 1 57 THR 57 92 92 THR THR A . n A 1 58 VAL 58 93 93 VAL VAL A . n A 1 59 TYR 59 94 94 TYR TYR A . n A 1 60 ALA 60 95 95 ALA ALA A . n A 1 61 ASP 61 96 96 ASP ASP A . n A 1 62 LEU 62 97 97 LEU LEU A . n A 1 63 LYS 63 98 98 LYS LYS A . n A 1 64 ASN 64 99 99 ASN ASN A . n A 1 65 ALA 65 100 100 ALA ALA A . n A 1 66 SER 66 101 101 SER SER A . n A 1 67 ILE 67 102 102 ILE ILE A . n A 1 68 GLY 68 103 103 GLY GLY A . n A 1 69 THR 69 104 104 THR THR A . n A 1 70 GLN 70 105 105 GLN GLN A . n A 1 71 GLU 71 106 106 GLU GLU A . n A 1 72 VAL 72 107 107 VAL VAL A . n A 1 73 LYS 73 108 108 LYS LYS A . n A 1 74 LEU 74 109 109 LEU LEU A . n A 1 75 GLN 75 110 110 GLN GLN A . n A 1 76 VAL 76 111 111 VAL VAL A . n A 1 77 LYS 77 112 112 LYS LYS A . n A 1 78 ASP 78 113 113 ASP ASP A . n A 1 79 VAL 79 114 114 VAL VAL A . n A 1 80 SER 80 115 115 SER SER A . n A 1 81 ASP 81 116 116 ASP ASP A . n A 1 82 ARG 82 117 117 ARG ARG A . n A 1 83 LEU 83 118 118 LEU LEU A . n A 1 84 LYS 84 119 119 LYS LYS A . n A 1 85 VAL 85 120 120 VAL VAL A . n A 1 86 LYS 86 121 121 LYS LYS A . n A 1 87 VAL 87 122 122 VAL VAL A . n A 1 88 ASN 88 123 123 ASN ASN A . n A 1 89 PRO 89 124 124 PRO PRO A . n A 1 90 ALA 90 125 125 ALA ALA A . n A 1 91 THR 91 126 126 THR THR A . n A 1 92 VAL 92 127 127 VAL VAL A . n A 1 93 ASN 93 128 128 ASN ASN A . n A 1 94 VAL 94 129 129 VAL VAL A . n A 1 95 ASN 95 130 130 ASN ASN A . n A 1 96 VAL 96 131 131 VAL VAL A . n A 1 97 GLN 97 132 132 GLN GLN A . n A 1 98 GLU 98 133 133 GLU GLU A . n A 1 99 LYS 99 134 134 LYS LYS A . n A 1 100 VAL 100 135 135 VAL VAL A . n A 1 101 THR 101 136 136 THR THR A . n A 1 102 LYS 102 137 137 LYS LYS A . n A 1 103 LYS 103 138 138 LYS LYS A . n A 1 104 PHE 104 139 ? ? ? A . n A 1 105 SER 105 140 ? ? ? A . n A 1 106 VAL 106 141 ? ? ? A . n A 1 107 ASP 107 142 ? ? ? A . n A 1 108 VAL 108 143 ? ? ? A . n A 1 109 GLU 109 144 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL A . C 3 SO4 1 202 2 SO4 SO4 A . D 4 HOH 1 301 105 HOH HOH A . D 4 HOH 2 302 94 HOH HOH A . D 4 HOH 3 303 139 HOH HOH A . D 4 HOH 4 304 113 HOH HOH A . D 4 HOH 5 305 31 HOH HOH A . D 4 HOH 6 306 138 HOH HOH A . D 4 HOH 7 307 61 HOH HOH A . D 4 HOH 8 308 55 HOH HOH A . D 4 HOH 9 309 47 HOH HOH A . D 4 HOH 10 310 58 HOH HOH A . D 4 HOH 11 311 124 HOH HOH A . D 4 HOH 12 312 103 HOH HOH A . D 4 HOH 13 313 98 HOH HOH A . D 4 HOH 14 314 155 HOH HOH A . D 4 HOH 15 315 120 HOH HOH A . D 4 HOH 16 316 60 HOH HOH A . D 4 HOH 17 317 46 HOH HOH A . D 4 HOH 18 318 114 HOH HOH A . D 4 HOH 19 319 12 HOH HOH A . D 4 HOH 20 320 35 HOH HOH A . D 4 HOH 21 321 151 HOH HOH A . D 4 HOH 22 322 25 HOH HOH A . D 4 HOH 23 323 149 HOH HOH A . D 4 HOH 24 324 11 HOH HOH A . D 4 HOH 25 325 37 HOH HOH A . D 4 HOH 26 326 158 HOH HOH A . D 4 HOH 27 327 117 HOH HOH A . D 4 HOH 28 328 7 HOH HOH A . D 4 HOH 29 329 143 HOH HOH A . D 4 HOH 30 330 153 HOH HOH A . D 4 HOH 31 331 77 HOH HOH A . D 4 HOH 32 332 10 HOH HOH A . D 4 HOH 33 333 82 HOH HOH A . D 4 HOH 34 334 4 HOH HOH A . D 4 HOH 35 335 16 HOH HOH A . D 4 HOH 36 336 157 HOH HOH A . D 4 HOH 37 337 28 HOH HOH A . D 4 HOH 38 338 102 HOH HOH A . D 4 HOH 39 339 70 HOH HOH A . D 4 HOH 40 340 34 HOH HOH A . D 4 HOH 41 341 29 HOH HOH A . D 4 HOH 42 342 21 HOH HOH A . D 4 HOH 43 343 6 HOH HOH A . D 4 HOH 44 344 30 HOH HOH A . D 4 HOH 45 345 118 HOH HOH A . D 4 HOH 46 346 14 HOH HOH A . D 4 HOH 47 347 44 HOH HOH A . D 4 HOH 48 348 17 HOH HOH A . D 4 HOH 49 349 27 HOH HOH A . D 4 HOH 50 350 134 HOH HOH A . D 4 HOH 51 351 142 HOH HOH A . D 4 HOH 52 352 23 HOH HOH A . D 4 HOH 53 353 131 HOH HOH A . D 4 HOH 54 354 119 HOH HOH A . D 4 HOH 55 355 96 HOH HOH A . D 4 HOH 56 356 50 HOH HOH A . D 4 HOH 57 357 165 HOH HOH A . D 4 HOH 58 358 95 HOH HOH A . D 4 HOH 59 359 39 HOH HOH A . D 4 HOH 60 360 154 HOH HOH A . D 4 HOH 61 361 51 HOH HOH A . D 4 HOH 62 362 15 HOH HOH A . D 4 HOH 63 363 93 HOH HOH A . D 4 HOH 64 364 152 HOH HOH A . D 4 HOH 65 365 5 HOH HOH A . D 4 HOH 66 366 53 HOH HOH A . D 4 HOH 67 367 32 HOH HOH A . D 4 HOH 68 368 150 HOH HOH A . D 4 HOH 69 369 48 HOH HOH A . D 4 HOH 70 370 115 HOH HOH A . D 4 HOH 71 371 19 HOH HOH A . D 4 HOH 72 372 75 HOH HOH A . D 4 HOH 73 373 81 HOH HOH A . D 4 HOH 74 374 13 HOH HOH A . D 4 HOH 75 375 88 HOH HOH A . D 4 HOH 76 376 56 HOH HOH A . D 4 HOH 77 377 40 HOH HOH A . D 4 HOH 78 378 41 HOH HOH A . D 4 HOH 79 379 36 HOH HOH A . D 4 HOH 80 380 52 HOH HOH A . D 4 HOH 81 381 64 HOH HOH A . D 4 HOH 82 382 100 HOH HOH A . D 4 HOH 83 383 76 HOH HOH A . D 4 HOH 84 384 79 HOH HOH A . D 4 HOH 85 385 57 HOH HOH A . D 4 HOH 86 386 43 HOH HOH A . D 4 HOH 87 387 42 HOH HOH A . D 4 HOH 88 388 144 HOH HOH A . D 4 HOH 89 389 20 HOH HOH A . D 4 HOH 90 390 33 HOH HOH A . D 4 HOH 91 391 85 HOH HOH A . D 4 HOH 92 392 22 HOH HOH A . D 4 HOH 93 393 62 HOH HOH A . D 4 HOH 94 394 67 HOH HOH A . D 4 HOH 95 395 68 HOH HOH A . D 4 HOH 96 396 130 HOH HOH A . D 4 HOH 97 397 112 HOH HOH A . D 4 HOH 98 398 8 HOH HOH A . D 4 HOH 99 399 26 HOH HOH A . D 4 HOH 100 400 166 HOH HOH A . D 4 HOH 101 401 45 HOH HOH A . D 4 HOH 102 402 72 HOH HOH A . D 4 HOH 103 403 148 HOH HOH A . D 4 HOH 104 404 63 HOH HOH A . D 4 HOH 105 405 49 HOH HOH A . D 4 HOH 106 406 106 HOH HOH A . D 4 HOH 107 407 9 HOH HOH A . D 4 HOH 108 408 66 HOH HOH A . D 4 HOH 109 409 3 HOH HOH A . D 4 HOH 110 410 91 HOH HOH A . D 4 HOH 111 411 65 HOH HOH A . D 4 HOH 112 412 111 HOH HOH A . D 4 HOH 113 413 54 HOH HOH A . D 4 HOH 114 414 18 HOH HOH A . D 4 HOH 115 415 159 HOH HOH A . D 4 HOH 116 416 92 HOH HOH A . D 4 HOH 117 417 24 HOH HOH A . D 4 HOH 118 418 141 HOH HOH A . D 4 HOH 119 419 73 HOH HOH A . D 4 HOH 120 420 164 HOH HOH A . D 4 HOH 121 421 147 HOH HOH A . D 4 HOH 122 422 160 HOH HOH A . D 4 HOH 123 423 86 HOH HOH A . D 4 HOH 124 424 78 HOH HOH A . D 4 HOH 125 425 71 HOH HOH A . D 4 HOH 126 426 137 HOH HOH A . D 4 HOH 127 427 136 HOH HOH A . D 4 HOH 128 428 145 HOH HOH A . D 4 HOH 129 429 74 HOH HOH A . D 4 HOH 130 430 126 HOH HOH A . D 4 HOH 131 431 59 HOH HOH A . D 4 HOH 132 432 123 HOH HOH A . D 4 HOH 133 433 122 HOH HOH A . D 4 HOH 134 434 146 HOH HOH A . D 4 HOH 135 435 97 HOH HOH A . D 4 HOH 136 436 99 HOH HOH A . D 4 HOH 137 437 127 HOH HOH A . D 4 HOH 138 438 121 HOH HOH A . D 4 HOH 139 439 128 HOH HOH A . D 4 HOH 140 440 101 HOH HOH A . D 4 HOH 141 441 69 HOH HOH A . D 4 HOH 142 442 104 HOH HOH A . D 4 HOH 143 443 84 HOH HOH A . D 4 HOH 144 444 132 HOH HOH A . D 4 HOH 145 445 161 HOH HOH A . D 4 HOH 146 446 107 HOH HOH A . D 4 HOH 147 447 125 HOH HOH A . D 4 HOH 148 448 162 HOH HOH A . D 4 HOH 149 449 83 HOH HOH A . D 4 HOH 150 450 116 HOH HOH A . D 4 HOH 151 451 89 HOH HOH A . D 4 HOH 152 452 110 HOH HOH A . D 4 HOH 153 453 109 HOH HOH A . D 4 HOH 154 454 129 HOH HOH A . D 4 HOH 155 455 156 HOH HOH A . D 4 HOH 156 456 38 HOH HOH A . D 4 HOH 157 457 163 HOH HOH A . D 4 HOH 158 458 87 HOH HOH A . D 4 HOH 159 459 90 HOH HOH A . D 4 HOH 160 460 140 HOH HOH A . D 4 HOH 161 461 135 HOH HOH A . D 4 HOH 162 462 80 HOH HOH A . D 4 HOH 163 463 108 HOH HOH A . D 4 HOH 164 464 133 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 210 ? 1 MORE -14 ? 1 'SSA (A^2)' 6370 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-02-03 2 'Structure model' 1 1 2016-03-02 3 'Structure model' 1 2 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_keywords # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 3 'Structure model' '_struct_keywords.pdbx_keywords' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 3.2184 -4.3850 9.3371 0.0165 0.0563 0.0471 0.0005 0.0012 -0.0172 0.5379 2.6108 7.1055 0.3107 1.2248 -1.1469 -0.0547 0.0585 -0.0038 0.0926 -0.0498 0.1558 -0.1501 -0.0403 -0.0344 'X-RAY DIFFRACTION' 2 ? refined 4.9269 -2.1805 25.5938 0.0175 0.0273 0.0460 0.0160 0.0116 0.0055 0.2070 0.1940 1.5607 0.1949 0.0932 0.0908 -0.0037 0.0172 -0.0135 0.0293 0.0374 0.0209 -0.0161 -0.0481 0.0045 'X-RAY DIFFRACTION' 3 ? refined 8.0120 1.1157 15.0415 0.0171 0.0137 0.0160 0.0005 0.0014 0.0039 0.7309 1.1269 3.4723 -0.2344 -0.2238 1.3233 -0.0071 0.0261 -0.0190 0.0756 0.0091 0.0488 -0.0835 -0.0275 0.1053 'X-RAY DIFFRACTION' 4 ? refined 1.1467 3.4323 19.2773 0.0234 0.0470 0.0679 0.0016 0.0127 0.0070 0.7483 0.3181 1.5517 0.2169 -0.8215 0.1338 -0.0267 0.0201 0.0066 0.0895 0.0291 0.0793 -0.0426 -0.0628 -0.0847 'X-RAY DIFFRACTION' 5 ? refined 2.6410 -3.5472 45.6742 0.0555 0.0915 0.0435 0.0334 0.0320 0.0047 4.5967 3.7404 5.9338 -0.3968 4.0287 -1.9971 -0.0838 0.2045 -0.1208 -0.5524 -0.0394 0.1309 0.3533 -0.1663 -0.5303 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 43 A 53 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 54 A 77 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 78 A 102 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 103 A 131 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 132 A 138 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? BALBES ? ? ? . 4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 36 ? A SER 1 2 1 Y 1 A ASN 37 ? A ASN 2 3 1 Y 1 A ALA 38 ? A ALA 3 4 1 Y 1 A THR 39 ? A THR 4 5 1 Y 1 A THR 40 ? A THR 5 6 1 Y 1 A SER 41 ? A SER 6 7 1 Y 1 A SER 42 ? A SER 7 8 1 Y 1 A PHE 139 ? A PHE 104 9 1 Y 1 A SER 140 ? A SER 105 10 1 Y 1 A VAL 141 ? A VAL 106 11 1 Y 1 A ASP 142 ? A ASP 107 12 1 Y 1 A VAL 143 ? A VAL 108 13 1 Y 1 A GLU 144 ? A GLU 109 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HOH O O N N 124 HOH H1 H N N 125 HOH H2 H N N 126 ILE N N N N 127 ILE CA C N S 128 ILE C C N N 129 ILE O O N N 130 ILE CB C N S 131 ILE CG1 C N N 132 ILE CG2 C N N 133 ILE CD1 C N N 134 ILE OXT O N N 135 ILE H H N N 136 ILE H2 H N N 137 ILE HA H N N 138 ILE HB H N N 139 ILE HG12 H N N 140 ILE HG13 H N N 141 ILE HG21 H N N 142 ILE HG22 H N N 143 ILE HG23 H N N 144 ILE HD11 H N N 145 ILE HD12 H N N 146 ILE HD13 H N N 147 ILE HXT H N N 148 LEU N N N N 149 LEU CA C N S 150 LEU C C N N 151 LEU O O N N 152 LEU CB C N N 153 LEU CG C N N 154 LEU CD1 C N N 155 LEU CD2 C N N 156 LEU OXT O N N 157 LEU H H N N 158 LEU H2 H N N 159 LEU HA H N N 160 LEU HB2 H N N 161 LEU HB3 H N N 162 LEU HG H N N 163 LEU HD11 H N N 164 LEU HD12 H N N 165 LEU HD13 H N N 166 LEU HD21 H N N 167 LEU HD22 H N N 168 LEU HD23 H N N 169 LEU HXT H N N 170 LYS N N N N 171 LYS CA C N S 172 LYS C C N N 173 LYS O O N N 174 LYS CB C N N 175 LYS CG C N N 176 LYS CD C N N 177 LYS CE C N N 178 LYS NZ N N N 179 LYS OXT O N N 180 LYS H H N N 181 LYS H2 H N N 182 LYS HA H N N 183 LYS HB2 H N N 184 LYS HB3 H N N 185 LYS HG2 H N N 186 LYS HG3 H N N 187 LYS HD2 H N N 188 LYS HD3 H N N 189 LYS HE2 H N N 190 LYS HE3 H N N 191 LYS HZ1 H N N 192 LYS HZ2 H N N 193 LYS HZ3 H N N 194 LYS HXT H N N 195 PHE N N N N 196 PHE CA C N S 197 PHE C C N N 198 PHE O O N N 199 PHE CB C N N 200 PHE CG C Y N 201 PHE CD1 C Y N 202 PHE CD2 C Y N 203 PHE CE1 C Y N 204 PHE CE2 C Y N 205 PHE CZ C Y N 206 PHE OXT O N N 207 PHE H H N N 208 PHE H2 H N N 209 PHE HA H N N 210 PHE HB2 H N N 211 PHE HB3 H N N 212 PHE HD1 H N N 213 PHE HD2 H N N 214 PHE HE1 H N N 215 PHE HE2 H N N 216 PHE HZ H N N 217 PHE HXT H N N 218 PRO N N N N 219 PRO CA C N S 220 PRO C C N N 221 PRO O O N N 222 PRO CB C N N 223 PRO CG C N N 224 PRO CD C N N 225 PRO OXT O N N 226 PRO H H N N 227 PRO HA H N N 228 PRO HB2 H N N 229 PRO HB3 H N N 230 PRO HG2 H N N 231 PRO HG3 H N N 232 PRO HD2 H N N 233 PRO HD3 H N N 234 PRO HXT H N N 235 SER N N N N 236 SER CA C N S 237 SER C C N N 238 SER O O N N 239 SER CB C N N 240 SER OG O N N 241 SER OXT O N N 242 SER H H N N 243 SER H2 H N N 244 SER HA H N N 245 SER HB2 H N N 246 SER HB3 H N N 247 SER HG H N N 248 SER HXT H N N 249 SO4 S S N N 250 SO4 O1 O N N 251 SO4 O2 O N N 252 SO4 O3 O N N 253 SO4 O4 O N N 254 THR N N N N 255 THR CA C N S 256 THR C C N N 257 THR O O N N 258 THR CB C N R 259 THR OG1 O N N 260 THR CG2 C N N 261 THR OXT O N N 262 THR H H N N 263 THR H2 H N N 264 THR HA H N N 265 THR HB H N N 266 THR HG1 H N N 267 THR HG21 H N N 268 THR HG22 H N N 269 THR HG23 H N N 270 THR HXT H N N 271 TYR N N N N 272 TYR CA C N S 273 TYR C C N N 274 TYR O O N N 275 TYR CB C N N 276 TYR CG C Y N 277 TYR CD1 C Y N 278 TYR CD2 C Y N 279 TYR CE1 C Y N 280 TYR CE2 C Y N 281 TYR CZ C Y N 282 TYR OH O N N 283 TYR OXT O N N 284 TYR H H N N 285 TYR H2 H N N 286 TYR HA H N N 287 TYR HB2 H N N 288 TYR HB3 H N N 289 TYR HD1 H N N 290 TYR HD2 H N N 291 TYR HE1 H N N 292 TYR HE2 H N N 293 TYR HH H N N 294 TYR HXT H N N 295 VAL N N N N 296 VAL CA C N S 297 VAL C C N N 298 VAL O O N N 299 VAL CB C N N 300 VAL CG1 C N N 301 VAL CG2 C N N 302 VAL OXT O N N 303 VAL H H N N 304 VAL H2 H N N 305 VAL HA H N N 306 VAL HB H N N 307 VAL HG11 H N N 308 VAL HG12 H N N 309 VAL HG13 H N N 310 VAL HG21 H N N 311 VAL HG22 H N N 312 VAL HG23 H N N 313 VAL HXT H N N 314 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 PHE N CA sing N N 184 PHE N H sing N N 185 PHE N H2 sing N N 186 PHE CA C sing N N 187 PHE CA CB sing N N 188 PHE CA HA sing N N 189 PHE C O doub N N 190 PHE C OXT sing N N 191 PHE CB CG sing N N 192 PHE CB HB2 sing N N 193 PHE CB HB3 sing N N 194 PHE CG CD1 doub Y N 195 PHE CG CD2 sing Y N 196 PHE CD1 CE1 sing Y N 197 PHE CD1 HD1 sing N N 198 PHE CD2 CE2 doub Y N 199 PHE CD2 HD2 sing N N 200 PHE CE1 CZ doub Y N 201 PHE CE1 HE1 sing N N 202 PHE CE2 CZ sing Y N 203 PHE CE2 HE2 sing N N 204 PHE CZ HZ sing N N 205 PHE OXT HXT sing N N 206 PRO N CA sing N N 207 PRO N CD sing N N 208 PRO N H sing N N 209 PRO CA C sing N N 210 PRO CA CB sing N N 211 PRO CA HA sing N N 212 PRO C O doub N N 213 PRO C OXT sing N N 214 PRO CB CG sing N N 215 PRO CB HB2 sing N N 216 PRO CB HB3 sing N N 217 PRO CG CD sing N N 218 PRO CG HG2 sing N N 219 PRO CG HG3 sing N N 220 PRO CD HD2 sing N N 221 PRO CD HD3 sing N N 222 PRO OXT HXT sing N N 223 SER N CA sing N N 224 SER N H sing N N 225 SER N H2 sing N N 226 SER CA C sing N N 227 SER CA CB sing N N 228 SER CA HA sing N N 229 SER C O doub N N 230 SER C OXT sing N N 231 SER CB OG sing N N 232 SER CB HB2 sing N N 233 SER CB HB3 sing N N 234 SER OG HG sing N N 235 SER OXT HXT sing N N 236 SO4 S O1 doub N N 237 SO4 S O2 doub N N 238 SO4 S O3 sing N N 239 SO4 S O4 sing N N 240 THR N CA sing N N 241 THR N H sing N N 242 THR N H2 sing N N 243 THR CA C sing N N 244 THR CA CB sing N N 245 THR CA HA sing N N 246 THR C O doub N N 247 THR C OXT sing N N 248 THR CB OG1 sing N N 249 THR CB CG2 sing N N 250 THR CB HB sing N N 251 THR OG1 HG1 sing N N 252 THR CG2 HG21 sing N N 253 THR CG2 HG22 sing N N 254 THR CG2 HG23 sing N N 255 THR OXT HXT sing N N 256 TYR N CA sing N N 257 TYR N H sing N N 258 TYR N H2 sing N N 259 TYR CA C sing N N 260 TYR CA CB sing N N 261 TYR CA HA sing N N 262 TYR C O doub N N 263 TYR C OXT sing N N 264 TYR CB CG sing N N 265 TYR CB HB2 sing N N 266 TYR CB HB3 sing N N 267 TYR CG CD1 doub Y N 268 TYR CG CD2 sing Y N 269 TYR CD1 CE1 sing Y N 270 TYR CD1 HD1 sing N N 271 TYR CD2 CE2 doub Y N 272 TYR CD2 HD2 sing N N 273 TYR CE1 CZ doub Y N 274 TYR CE1 HE1 sing N N 275 TYR CE2 CZ sing Y N 276 TYR CE2 HE2 sing N N 277 TYR CZ OH sing N N 278 TYR OH HH sing N N 279 TYR OXT HXT sing N N 280 VAL N CA sing N N 281 VAL N H sing N N 282 VAL N H2 sing N N 283 VAL CA C sing N N 284 VAL CA CB sing N N 285 VAL CA HA sing N N 286 VAL C O doub N N 287 VAL C OXT sing N N 288 VAL CB CG1 sing N N 289 VAL CB CG2 sing N N 290 VAL CB HB sing N N 291 VAL CG1 HG11 sing N N 292 VAL CG1 HG12 sing N N 293 VAL CG1 HG13 sing N N 294 VAL CG2 HG21 sing N N 295 VAL CG2 HG22 sing N N 296 VAL CG2 HG23 sing N N 297 VAL OXT HXT sing N N 298 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4QDY _pdbx_initial_refinement_model.details ? #