HEADER TRANSFERASE/RNA 22-JAN-16 5HR6 TITLE X-RAY CRYSTAL STRUCTURE OF C118A RLMN WITH CROSS-LINKED TRNA PURIFIED TITLE 2 FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RLMN METHYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 23S RRNA (ADENINE(2503)-C(2))-METHYLTRANSFERASE,23S RRNA COMPND 5 M2A2503 METHYLTRANSFERASE,RIBOSOMAL RNA LARGE SUBUNIT COMPND 6 METHYLTRANSFERASE N,TRNA (ADENINE(37)-C(2))-METHYLTRANSFERASE,TRNA COMPND 7 M2A37 METHYLTRANSFERASE; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TRNA GLU; COMPND 11 CHAIN: C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 8 ORGANISM_TAXID: 562 KEYWDS PROTEIN-RNA COMPLEX, RADICAL SAM ENZYME, TRANSFER RNA, IRON-SULFUR KEYWDS 2 CLUSTER, TRANSFERASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.L.SCHWALM,T.L.GROVE,S.J.BOOKER,A.K.BOAL REVDAT 2 27-APR-16 5HR6 1 JRNL REVDAT 1 13-APR-16 5HR6 0 JRNL AUTH E.L.SCHWALM,T.L.GROVE,S.J.BOOKER,A.K.BOAL JRNL TITL CRYSTALLOGRAPHIC CAPTURE OF A RADICAL S-ADENOSYLMETHIONINE JRNL TITL 2 ENZYME IN THE ACT OF MODIFYING TRNA. JRNL REF SCIENCE V. 352 309 2016 JRNL REFN ESSN 1095-9203 JRNL PMID 27081063 JRNL DOI 10.1126/SCIENCE.AAD5367 REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 39727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2724 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5572 REMARK 3 NUCLEIC ACID ATOMS : 2845 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.52000 REMARK 3 B22 (A**2) : 1.09000 REMARK 3 B33 (A**2) : 0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.659 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.310 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.233 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.292 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8926 ; 0.012 ; 0.016 REMARK 3 BOND LENGTHS OTHERS (A): 6902 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12721 ; 1.695 ; 1.708 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16008 ; 1.178 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 706 ; 6.899 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;38.694 ;23.955 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1030 ;17.107 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;18.056 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1418 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8051 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2030 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2836 ; 3.824 ; 5.387 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2835 ; 3.824 ; 5.386 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3538 ; 5.738 ; 8.073 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3539 ; 5.737 ; 8.075 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6090 ; 4.978 ; 6.475 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6089 ; 4.977 ; 6.474 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 9160 ; 7.171 ; 9.643 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10795 ; 9.429 ;54.837 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 10786 ; 9.428 ;54.843 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 371 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6642 -4.8395 55.6632 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.0986 REMARK 3 T33: 0.1133 T12: -0.0167 REMARK 3 T13: 0.0287 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 0.3098 L22: 0.3765 REMARK 3 L33: 0.9080 L12: -0.2124 REMARK 3 L13: -0.2264 L23: -0.1930 REMARK 3 S TENSOR REMARK 3 S11: 0.0524 S12: 0.1113 S13: 0.0794 REMARK 3 S21: 0.0263 S22: -0.0745 S23: -0.1040 REMARK 3 S31: 0.0220 S32: -0.1578 S33: 0.0220 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 69 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2441 -5.1174 23.9491 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.2928 REMARK 3 T33: 0.0563 T12: 0.0212 REMARK 3 T13: 0.0420 T23: 0.0522 REMARK 3 L TENSOR REMARK 3 L11: 0.6415 L22: 0.2251 REMARK 3 L33: 1.3859 L12: -0.2083 REMARK 3 L13: -0.6556 L23: -0.1116 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: 0.2917 S13: 0.0400 REMARK 3 S21: 0.0234 S22: -0.1703 S23: -0.0640 REMARK 3 S31: -0.1098 S32: -0.1433 S33: 0.0863 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 18 B 371 REMARK 3 ORIGIN FOR THE GROUP (A): 40.7832 -3.3133 18.8936 REMARK 3 T TENSOR REMARK 3 T11: 0.1336 T22: 0.0745 REMARK 3 T33: 0.1453 T12: 0.0395 REMARK 3 T13: -0.0248 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.2989 L22: 0.4478 REMARK 3 L33: 0.9931 L12: 0.2931 REMARK 3 L13: -0.0946 L23: -0.0944 REMARK 3 S TENSOR REMARK 3 S11: -0.0301 S12: -0.0407 S13: -0.0240 REMARK 3 S21: 0.0263 S22: 0.0068 S23: -0.1471 REMARK 3 S31: 0.0118 S32: -0.1488 S33: 0.0233 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 3 D 68 REMARK 3 ORIGIN FOR THE GROUP (A): 52.7756 -2.3013 50.3180 REMARK 3 T TENSOR REMARK 3 T11: 0.1152 T22: 0.3201 REMARK 3 T33: 0.0291 T12: 0.0370 REMARK 3 T13: -0.0328 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 0.6838 L22: 0.3656 REMARK 3 L33: 1.3314 L12: 0.4046 REMARK 3 L13: 0.7718 L23: 0.2241 REMARK 3 S TENSOR REMARK 3 S11: 0.1348 S12: -0.1830 S13: -0.0090 REMARK 3 S21: 0.0354 S22: -0.1777 S23: -0.0164 REMARK 3 S31: 0.1381 S32: -0.0905 S33: 0.0430 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HR6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000217575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23364 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 88.663 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.97100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, POTASSIUM CHLORIDE, REMARK 280 MAGNESIUM CHLORIDE, TRIS-HCL, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.91050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 LEU A 5 REMARK 465 VAL A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 GLU A 9 REMARK 465 ASN A 10 REMARK 465 VAL A 11 REMARK 465 THR A 12 REMARK 465 THR A 13 REMARK 465 LYS A 14 REMARK 465 ASP A 15 REMARK 465 GLY A 16 REMARK 465 LYS A 17 REMARK 465 LYS A 372 REMARK 465 ARG A 373 REMARK 465 MET A 374 REMARK 465 GLN A 375 REMARK 465 GLY A 376 REMARK 465 GLU A 377 REMARK 465 ALA A 378 REMARK 465 ILE A 379 REMARK 465 ASP A 380 REMARK 465 ILE A 381 REMARK 465 LYS A 382 REMARK 465 ALA A 383 REMARK 465 VAL A 384 REMARK 465 GLY A 385 REMARK 465 ASN A 386 REMARK 465 SER A 387 REMARK 465 SER A 388 REMARK 465 SER A 389 REMARK 465 VAL A 390 REMARK 465 ASP A 391 REMARK 465 LYS A 392 REMARK 465 LEU A 393 REMARK 465 ALA A 394 REMARK 465 ALA A 395 REMARK 465 ALA A 396 REMARK 465 LEU A 397 REMARK 465 GLU A 398 REMARK 465 HIS A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 4 REMARK 465 LEU B 5 REMARK 465 VAL B 6 REMARK 465 THR B 7 REMARK 465 PRO B 8 REMARK 465 GLU B 9 REMARK 465 ASN B 10 REMARK 465 VAL B 11 REMARK 465 THR B 12 REMARK 465 THR B 13 REMARK 465 LYS B 14 REMARK 465 ASP B 15 REMARK 465 GLY B 16 REMARK 465 LYS B 17 REMARK 465 LYS B 372 REMARK 465 ARG B 373 REMARK 465 MET B 374 REMARK 465 GLN B 375 REMARK 465 GLY B 376 REMARK 465 GLU B 377 REMARK 465 ALA B 378 REMARK 465 ILE B 379 REMARK 465 ASP B 380 REMARK 465 ILE B 381 REMARK 465 LYS B 382 REMARK 465 ALA B 383 REMARK 465 VAL B 384 REMARK 465 GLY B 385 REMARK 465 ASN B 386 REMARK 465 SER B 387 REMARK 465 SER B 388 REMARK 465 SER B 389 REMARK 465 VAL B 390 REMARK 465 ASP B 391 REMARK 465 LYS B 392 REMARK 465 LEU B 393 REMARK 465 ALA B 394 REMARK 465 ALA B 395 REMARK 465 ALA B 396 REMARK 465 LEU B 397 REMARK 465 GLU B 398 REMARK 465 HIS B 399 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 465 HIS B 402 REMARK 465 HIS B 403 REMARK 465 HIS B 404 REMARK 465 C D 2 REMARK 465 G D 69 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CS SMC A 355 N1 A C 37 2.03 REMARK 500 CS SMC B 355 N1 A D 37 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 368 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 C C 11 O5' - P - OP2 ANGL. DEV. = -7.2 DEGREES REMARK 500 C C 32 C2' - C3' - O3' ANGL. DEV. = 10.3 DEGREES REMARK 500 U C 53 O5' - P - OP2 ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 34 -7.21 -56.77 REMARK 500 ASN A 56 98.60 -166.47 REMARK 500 LYS A 163 48.67 -89.85 REMARK 500 VAL A 164 -39.54 -136.67 REMARK 500 ASN A 184 40.71 -143.45 REMARK 500 SER A 233 76.43 -69.52 REMARK 500 HIS A 235 -3.81 73.94 REMARK 500 LYS A 267 41.73 -109.71 REMARK 500 ASN A 286 16.97 -142.71 REMARK 500 THR A 369 -72.30 -67.01 REMARK 500 ARG B 68 -20.76 -30.13 REMARK 500 VAL B 99 88.99 -156.88 REMARK 500 ILE B 148 -67.45 -92.71 REMARK 500 HIS B 235 -3.26 69.73 REMARK 500 ASN B 286 16.62 -145.45 REMARK 500 ALA B 359 71.95 -155.18 REMARK 500 THR B 369 -71.54 -51.65 REMARK 500 LEU B 370 -71.83 -52.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 G C 14 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 125 SG REMARK 620 2 SF4 A 502 S1 116.8 REMARK 620 3 SF4 A 502 S2 127.7 91.4 REMARK 620 4 SF4 A 502 S3 131.0 90.4 88.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 129 SG REMARK 620 2 SF4 A 502 S1 136.8 REMARK 620 3 SF4 A 502 S3 125.7 89.7 REMARK 620 4 SF4 A 502 S4 111.1 91.5 88.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 132 SG REMARK 620 2 SF4 A 502 S2 128.5 REMARK 620 3 SF4 A 502 S3 125.4 89.1 REMARK 620 4 SF4 A 502 S4 122.1 90.0 90.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 196 O REMARK 620 2 LEU A 203 O 74.4 REMARK 620 3 A C 26 O2' 136.6 118.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U C 7 OP1 REMARK 620 2 C C 8 OP2 67.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 103 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U C 7 O4 REMARK 620 2 A C 13 OP2 84.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C C 38 O2' REMARK 620 2 C C 38 O2 78.3 REMARK 620 3 G C 39 O6 147.3 107.0 REMARK 620 4 HOH C 202 O 143.1 66.9 60.1 REMARK 620 5 HOH A 610 O 76.1 84.6 135.9 88.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 125 SG REMARK 620 2 SF4 B 502 S1 128.3 REMARK 620 3 SF4 B 502 S2 122.4 92.4 REMARK 620 4 SF4 B 502 S3 124.5 88.3 90.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 129 SG REMARK 620 2 SF4 B 502 S1 131.2 REMARK 620 3 SF4 B 502 S2 131.6 91.8 REMARK 620 4 SF4 B 502 S4 110.0 89.2 88.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 132 SG REMARK 620 2 SF4 B 502 S1 124.2 REMARK 620 3 SF4 B 502 S3 131.1 88.2 REMARK 620 4 SF4 B 502 S4 120.6 90.0 91.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 196 O REMARK 620 2 LEU B 203 O 85.4 REMARK 620 3 A D 26 O3' 161.4 82.2 REMARK 620 4 A D 26 O2' 133.1 135.4 64.4 REMARK 620 5 HOH D 201 O 87.7 77.0 76.0 118.7 REMARK 620 6 HOH B 607 O 85.6 147.5 97.5 69.7 71.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C D 38 O2' REMARK 620 2 C D 38 O2 87.2 REMARK 620 3 HOH B 614 O 68.8 84.1 REMARK 620 4 HOH D 203 O 145.9 66.0 86.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 502 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 501 N REMARK 620 2 SF4 A 502 S1 91.6 REMARK 620 3 SF4 A 502 S2 99.0 89.0 REMARK 620 4 SF4 A 502 S4 174.0 89.7 86.8 REMARK 620 5 MET A 501 O 74.7 106.2 163.5 99.4 REMARK 620 6 MET A 501 SD 83.3 174.0 88.6 95.7 75.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 502 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET B 501 N REMARK 620 2 SF4 B 502 S2 88.3 REMARK 620 3 SF4 B 502 S3 100.1 87.7 REMARK 620 4 SF4 B 502 S4 170.3 86.6 88.0 REMARK 620 5 MET B 501 O 79.2 105.0 167.2 94.2 REMARK 620 6 MET B 501 SD 82.7 171.0 94.5 102.1 72.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MET A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5AD A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MET B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5AD B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HR7 RELATED DB: PDB DBREF 5HR6 A 1 384 UNP A7ZPW0 RLMN_ECO24 1 384 DBREF1 5HR6 C 2 69 GB CP012869.1 DBREF2 5HR6 C 937521852 431879 431812 DBREF 5HR6 B 1 384 UNP A7ZPW0 RLMN_ECO24 1 384 DBREF1 5HR6 D 2 69 GB CP012869.1 DBREF2 5HR6 D 937521852 431879 431812 SEQADV 5HR6 ALA A 118 UNP A7ZPW0 CYS 118 ENGINEERED MUTATION SEQADV 5HR6 GLY A 385 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ASN A 386 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER A 387 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER A 388 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER A 389 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 VAL A 390 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ASP A 391 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LYS A 392 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LEU A 393 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA A 394 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA A 395 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA A 396 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LEU A 397 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 GLU A 398 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 399 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 400 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 401 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 402 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 403 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS A 404 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA B 118 UNP A7ZPW0 CYS 118 ENGINEERED MUTATION SEQADV 5HR6 GLY B 385 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ASN B 386 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER B 387 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER B 388 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 SER B 389 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 VAL B 390 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ASP B 391 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LYS B 392 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LEU B 393 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA B 394 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA B 395 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 ALA B 396 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 LEU B 397 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 GLU B 398 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 399 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 400 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 401 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 402 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 403 UNP A7ZPW0 EXPRESSION TAG SEQADV 5HR6 HIS B 404 UNP A7ZPW0 EXPRESSION TAG SEQRES 1 A 404 MET SER GLU GLN LEU VAL THR PRO GLU ASN VAL THR THR SEQRES 2 A 404 LYS ASP GLY LYS ILE ASN LEU LEU ASP LEU ASN ARG GLN SEQRES 3 A 404 GLN MET ARG GLU PHE PHE LYS ASP LEU GLY GLU LYS PRO SEQRES 4 A 404 PHE ARG ALA ASP GLN VAL MET LYS TRP MET TYR HIS TYR SEQRES 5 A 404 CYS CYS ASP ASN PHE ASP GLU MET THR ASP ILE ASN LYS SEQRES 6 A 404 VAL LEU ARG GLY LYS LEU LYS GLU VAL ALA GLU ILE ARG SEQRES 7 A 404 ALA PRO GLU VAL VAL GLU GLU GLN ARG SER SER ASP GLY SEQRES 8 A 404 THR ILE LYS TRP ALA ILE ALA VAL GLY ASP GLN ARG VAL SEQRES 9 A 404 GLU THR VAL TYR ILE PRO GLU ASP ASP ARG ALA THR LEU SEQRES 10 A 404 ALA VAL SER SER GLN VAL GLY CYS ALA LEU GLU CYS LYS SEQRES 11 A 404 PHE CYS SER THR ALA GLN GLN GLY PHE ASN ARG ASN LEU SEQRES 12 A 404 ARG VAL SER GLU ILE ILE GLY GLN VAL TRP ARG ALA ALA SEQRES 13 A 404 LYS ILE VAL GLY ALA ALA LYS VAL THR GLY GLN ARG PRO SEQRES 14 A 404 ILE THR ASN VAL VAL MET MET GLY MET GLY GLU PRO LEU SEQRES 15 A 404 LEU ASN LEU ASN ASN VAL VAL PRO ALA MET GLU ILE MET SEQRES 16 A 404 LEU ASP ASP PHE GLY PHE GLY LEU SER LYS ARG ARG VAL SEQRES 17 A 404 THR LEU SER THR SER GLY VAL VAL PRO ALA LEU ASP LYS SEQRES 18 A 404 LEU GLY ASP MET ILE ASP VAL ALA LEU ALA ILE SER LEU SEQRES 19 A 404 HIS ALA PRO ASN ASP GLU ILE ARG ASP GLU ILE VAL PRO SEQRES 20 A 404 ILE ASN LYS LYS TYR ASN ILE GLU THR PHE LEU ALA ALA SEQRES 21 A 404 VAL ARG ARG TYR LEU GLU LYS SER ASN ALA ASN GLN GLY SEQRES 22 A 404 ARG VAL THR ILE GLU TYR VAL MET LEU ASP HIS VAL ASN SEQRES 23 A 404 ASP GLY THR GLU HIS ALA HIS GLN LEU ALA GLU LEU LEU SEQRES 24 A 404 LYS ASP THR PRO CYS LYS ILE ASN LEU ILE PRO TRP ASN SEQRES 25 A 404 PRO PHE PRO GLY ALA PRO TYR GLY ARG SER SER ASN SER SEQRES 26 A 404 ARG ILE ASP ARG PHE SER LYS VAL LEU MET SER TYR GLY SEQRES 27 A 404 PHE THR THR ILE VAL ARG LYS THR ARG GLY ASP ASP ILE SEQRES 28 A 404 ASP ALA ALA SMC GLY GLN LEU ALA GLY ASP VAL ILE ASP SEQRES 29 A 404 ARG THR LYS ARG THR LEU ARG LYS ARG MET GLN GLY GLU SEQRES 30 A 404 ALA ILE ASP ILE LYS ALA VAL GLY ASN SER SER SER VAL SEQRES 31 A 404 ASP LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 32 A 404 HIS SEQRES 1 C 68 C C C C U U C G U C U A G SEQRES 2 C 68 A G G C C C A G G A C A C SEQRES 3 C 68 C G C C C U U U C A C G G SEQRES 4 C 68 C G G U A A C A G G G G U SEQRES 5 C 68 U C G A A U C C C C U A G SEQRES 6 C 68 G G G SEQRES 1 B 404 MET SER GLU GLN LEU VAL THR PRO GLU ASN VAL THR THR SEQRES 2 B 404 LYS ASP GLY LYS ILE ASN LEU LEU ASP LEU ASN ARG GLN SEQRES 3 B 404 GLN MET ARG GLU PHE PHE LYS ASP LEU GLY GLU LYS PRO SEQRES 4 B 404 PHE ARG ALA ASP GLN VAL MET LYS TRP MET TYR HIS TYR SEQRES 5 B 404 CYS CYS ASP ASN PHE ASP GLU MET THR ASP ILE ASN LYS SEQRES 6 B 404 VAL LEU ARG GLY LYS LEU LYS GLU VAL ALA GLU ILE ARG SEQRES 7 B 404 ALA PRO GLU VAL VAL GLU GLU GLN ARG SER SER ASP GLY SEQRES 8 B 404 THR ILE LYS TRP ALA ILE ALA VAL GLY ASP GLN ARG VAL SEQRES 9 B 404 GLU THR VAL TYR ILE PRO GLU ASP ASP ARG ALA THR LEU SEQRES 10 B 404 ALA VAL SER SER GLN VAL GLY CYS ALA LEU GLU CYS LYS SEQRES 11 B 404 PHE CYS SER THR ALA GLN GLN GLY PHE ASN ARG ASN LEU SEQRES 12 B 404 ARG VAL SER GLU ILE ILE GLY GLN VAL TRP ARG ALA ALA SEQRES 13 B 404 LYS ILE VAL GLY ALA ALA LYS VAL THR GLY GLN ARG PRO SEQRES 14 B 404 ILE THR ASN VAL VAL MET MET GLY MET GLY GLU PRO LEU SEQRES 15 B 404 LEU ASN LEU ASN ASN VAL VAL PRO ALA MET GLU ILE MET SEQRES 16 B 404 LEU ASP ASP PHE GLY PHE GLY LEU SER LYS ARG ARG VAL SEQRES 17 B 404 THR LEU SER THR SER GLY VAL VAL PRO ALA LEU ASP LYS SEQRES 18 B 404 LEU GLY ASP MET ILE ASP VAL ALA LEU ALA ILE SER LEU SEQRES 19 B 404 HIS ALA PRO ASN ASP GLU ILE ARG ASP GLU ILE VAL PRO SEQRES 20 B 404 ILE ASN LYS LYS TYR ASN ILE GLU THR PHE LEU ALA ALA SEQRES 21 B 404 VAL ARG ARG TYR LEU GLU LYS SER ASN ALA ASN GLN GLY SEQRES 22 B 404 ARG VAL THR ILE GLU TYR VAL MET LEU ASP HIS VAL ASN SEQRES 23 B 404 ASP GLY THR GLU HIS ALA HIS GLN LEU ALA GLU LEU LEU SEQRES 24 B 404 LYS ASP THR PRO CYS LYS ILE ASN LEU ILE PRO TRP ASN SEQRES 25 B 404 PRO PHE PRO GLY ALA PRO TYR GLY ARG SER SER ASN SER SEQRES 26 B 404 ARG ILE ASP ARG PHE SER LYS VAL LEU MET SER TYR GLY SEQRES 27 B 404 PHE THR THR ILE VAL ARG LYS THR ARG GLY ASP ASP ILE SEQRES 28 B 404 ASP ALA ALA SMC GLY GLN LEU ALA GLY ASP VAL ILE ASP SEQRES 29 B 404 ARG THR LYS ARG THR LEU ARG LYS ARG MET GLN GLY GLU SEQRES 30 B 404 ALA ILE ASP ILE LYS ALA VAL GLY ASN SER SER SER VAL SEQRES 31 B 404 ASP LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 32 B 404 HIS SEQRES 1 D 68 C C C C U U C G U C U A G SEQRES 2 D 68 A G G C C C A G G A C A C SEQRES 3 D 68 C G C C C U U U C A C G G SEQRES 4 D 68 C G G U A A C A G G G G U SEQRES 5 D 68 U C G A A U C C C C U A G SEQRES 6 D 68 G G G MODRES 5HR6 SMC A 355 CYS MODIFIED RESIDUE MODRES 5HR6 SMC B 355 CYS MODIFIED RESIDUE HET SMC A 355 7 HET SMC B 355 7 HET MET A 501 9 HET SF4 A 502 8 HET 5AD A 503 18 HET MG A 504 1 HET MG C 101 1 HET MG C 102 1 HET MG C 103 1 HET MET B 501 9 HET SF4 B 502 8 HET 5AD B 503 18 HET MG B 504 1 HET MG D 101 1 HETNAM SMC S-METHYLCYSTEINE HETNAM MET METHIONINE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM 5AD 5'-DEOXYADENOSINE HETNAM MG MAGNESIUM ION FORMUL 1 SMC 2(C4 H9 N O2 S) FORMUL 5 MET 2(C5 H11 N O2 S) FORMUL 6 SF4 2(FE4 S4) FORMUL 7 5AD 2(C10 H13 N5 O3) FORMUL 8 MG 6(MG 2+) FORMUL 17 HOH *46(H2 O) HELIX 1 AA1 ASN A 19 LEU A 23 5 5 HELIX 2 AA2 ASN A 24 ASP A 34 1 11 HELIX 3 AA3 PHE A 40 TYR A 52 1 13 HELIX 4 AA4 ASN A 56 MET A 60 5 5 HELIX 5 AA5 ASN A 64 ALA A 75 1 12 HELIX 6 AA6 CYS A 132 GLN A 137 1 6 HELIX 7 AA7 ARG A 144 GLY A 160 1 17 HELIX 8 AA8 ALA A 161 GLY A 166 1 6 HELIX 9 AA9 GLU A 180 LEU A 183 5 4 HELIX 10 AB1 ASN A 184 ASP A 197 1 14 HELIX 11 AB2 SER A 204 ARG A 206 5 3 HELIX 12 AB3 VAL A 215 ASP A 224 1 10 HELIX 13 AB4 ASN A 238 VAL A 246 1 9 HELIX 14 AB5 PRO A 247 LYS A 251 5 5 HELIX 15 AB6 ASN A 253 LYS A 267 1 15 HELIX 16 AB7 GLY A 288 LEU A 299 1 12 HELIX 17 AB8 SER A 323 TYR A 337 1 15 HELIX 18 AB9 GLY A 348 ASP A 352 5 5 HELIX 19 AC1 ASN B 19 LEU B 23 5 5 HELIX 20 AC2 ASN B 24 LEU B 35 1 12 HELIX 21 AC3 LYS B 38 CYS B 53 1 16 HELIX 22 AC4 ASN B 56 MET B 60 5 5 HELIX 23 AC5 VAL B 66 ALA B 75 1 10 HELIX 24 AC6 CYS B 132 GLN B 137 1 6 HELIX 25 AC7 ARG B 144 GLY B 160 1 17 HELIX 26 AC8 ALA B 161 GLY B 166 1 6 HELIX 27 AC9 GLU B 180 LEU B 183 5 4 HELIX 28 AD1 ASN B 184 ASP B 197 1 14 HELIX 29 AD2 SER B 204 ARG B 206 5 3 HELIX 30 AD3 VAL B 215 ASP B 224 1 10 HELIX 31 AD4 ASN B 238 VAL B 246 1 9 HELIX 32 AD5 PRO B 247 LYS B 251 5 5 HELIX 33 AD6 ASN B 253 LYS B 267 1 15 HELIX 34 AD7 GLY B 288 LEU B 299 1 12 HELIX 35 AD8 SER B 323 TYR B 337 1 15 HELIX 36 AD9 GLY B 348 ASP B 352 5 5 SHEET 1 AA110 VAL A 82 ARG A 87 0 SHEET 2 AA110 ILE A 93 VAL A 99 -1 O ALA A 96 N VAL A 83 SHEET 3 AA110 GLN A 102 GLU A 111 -1 O VAL A 104 N ILE A 97 SHEET 4 AA110 ARG A 114 ALA A 118 -1 O ALA A 118 N VAL A 107 SHEET 5 AA110 ASN A 172 MET A 175 1 O VAL A 174 N LEU A 117 SHEET 6 AA110 VAL A 208 THR A 212 1 O THR A 209 N MET A 175 SHEET 7 AA110 ALA A 229 SER A 233 1 O ALA A 229 N LEU A 210 SHEET 8 AA110 VAL A 275 MET A 281 1 O GLU A 278 N ILE A 232 SHEET 9 AA110 CYS A 304 PRO A 310 1 O ASN A 307 N ILE A 277 SHEET 10 AA110 THR A 341 VAL A 343 1 O ILE A 342 N ILE A 306 SHEET 1 AA2 2 GLN A 122 GLY A 124 0 SHEET 2 AA2 2 PHE A 139 ASN A 142 -1 O ARG A 141 N VAL A 123 SHEET 1 AA310 VAL B 82 ARG B 87 0 SHEET 2 AA310 ILE B 93 VAL B 99 -1 O LYS B 94 N GLN B 86 SHEET 3 AA310 GLN B 102 GLU B 111 -1 O VAL B 104 N ILE B 97 SHEET 4 AA310 ARG B 114 ALA B 118 -1 O ARG B 114 N GLU B 111 SHEET 5 AA310 ASN B 172 MET B 175 1 O VAL B 174 N LEU B 117 SHEET 6 AA310 VAL B 208 THR B 212 1 O THR B 209 N MET B 175 SHEET 7 AA310 ALA B 229 SER B 233 1 O ALA B 229 N LEU B 210 SHEET 8 AA310 VAL B 275 MET B 281 1 O GLU B 278 N ILE B 232 SHEET 9 AA310 CYS B 304 PRO B 310 1 O ASN B 307 N ILE B 277 SHEET 10 AA310 THR B 341 VAL B 343 1 O ILE B 342 N ILE B 306 SHEET 1 AA4 2 GLN B 122 GLY B 124 0 SHEET 2 AA4 2 PHE B 139 ASN B 142 -1 O ARG B 141 N VAL B 123 LINK SG CYS A 125 FE4 SF4 A 502 1555 1555 2.14 LINK SG CYS A 129 FE2 SF4 A 502 1555 1555 2.15 LINK SG CYS A 132 FE1 SF4 A 502 1555 1555 2.21 LINK O LEU A 196 MG MG A 504 1555 1555 2.60 LINK O LEU A 203 MG MG A 504 1555 1555 2.96 LINK C ALA A 354 N SMC A 355 1555 1555 1.33 LINK CS SMC A 355 C2 A C 37 1555 1555 1.55 LINK C SMC A 355 N GLY A 356 1555 1555 1.34 LINK OP1 U C 7 MG MG C 102 1555 1555 2.33 LINK O4 U C 7 MG MG C 103 1555 1555 3.00 LINK OP2 C C 8 MG MG C 102 1555 1555 2.76 LINK OP2 A C 13 MG MG C 103 1555 1555 2.91 LINK O2' A C 26 MG MG A 504 1555 1555 2.80 LINK O2' C C 38 MG MG C 101 1555 1555 2.30 LINK O2 C C 38 MG MG C 101 1555 1555 2.23 LINK O6 G C 39 MG MG C 101 1555 1555 2.95 LINK SG CYS B 125 FE4 SF4 B 502 1555 1555 2.08 LINK SG CYS B 129 FE3 SF4 B 502 1555 1555 2.13 LINK SG CYS B 132 FE2 SF4 B 502 1555 1555 2.21 LINK O LEU B 196 MG MG B 504 1555 1555 2.57 LINK O LEU B 203 MG MG B 504 1555 1555 2.69 LINK C ALA B 354 N SMC B 355 1555 1555 1.34 LINK CS SMC B 355 C2 A D 37 1555 1555 1.55 LINK C SMC B 355 N GLY B 356 1555 1555 1.32 LINK O3' A D 26 MG MG B 504 1555 1555 2.74 LINK O2' A D 26 MG MG B 504 1555 1555 2.90 LINK O2' C D 38 MG MG D 101 1555 1555 2.75 LINK O2 C D 38 MG MG D 101 1555 1555 2.28 LINK N MET A 501 FE3 SF4 A 502 1555 1555 1.92 LINK O MET A 501 FE3 SF4 A 502 1555 1555 2.09 LINK SD MET A 501 FE3 SF4 A 502 1555 1555 2.35 LINK MG MG C 101 O HOH C 202 1555 1555 2.69 LINK MG MG C 101 O HOH A 610 1555 1555 2.40 LINK N MET B 501 FE1 SF4 B 502 1555 1555 1.90 LINK O MET B 501 FE1 SF4 B 502 1555 1555 2.09 LINK SD MET B 501 FE1 SF4 B 502 1555 1555 2.36 LINK MG MG B 504 O HOH D 201 1555 1555 2.33 LINK MG MG B 504 O HOH B 607 1555 1555 2.35 LINK MG MG D 101 O HOH B 614 1555 1555 2.54 LINK MG MG D 101 O HOH D 203 1555 1555 2.83 CISPEP 1 GLY B 360 ASP B 361 0 12.51 SITE 1 AC1 10 MET A 175 GLY A 177 GLY A 179 GLU A 180 SITE 2 AC1 10 SER A 211 THR A 212 SER A 213 SER A 233 SITE 3 AC1 10 SF4 A 502 5AD A 503 SITE 1 AC2 5 CYS A 125 CYS A 129 CYS A 132 SER A 213 SITE 2 AC2 5 MET A 501 SITE 1 AC3 12 PHE A 131 CYS A 132 SER A 233 HIS A 235 SITE 2 AC3 12 GLU A 278 VAL A 280 ILE A 309 TRP A 311 SITE 3 AC3 12 ASN A 312 SMC A 355 GLY A 356 MET A 501 SITE 1 AC4 3 LEU A 196 LEU A 203 A C 26 SITE 1 AC5 4 HOH A 610 C C 38 G C 39 HOH C 202 SITE 1 AC6 2 U C 7 C C 8 SITE 1 AC7 3 U C 7 A C 13 G C 14 SITE 1 AC8 9 GLY B 177 GLY B 179 GLU B 180 SER B 211 SITE 2 AC8 9 THR B 212 SER B 213 SER B 233 SF4 B 502 SITE 3 AC8 9 5AD B 503 SITE 1 AC9 7 CYS B 125 LEU B 127 CYS B 129 CYS B 132 SITE 2 AC9 7 ALA B 135 SER B 213 MET B 501 SITE 1 AD1 13 PHE B 131 CYS B 132 SER B 233 HIS B 235 SITE 2 AD1 13 GLU B 278 VAL B 280 ILE B 309 TRP B 311 SITE 3 AD1 13 ASN B 312 SMC B 355 GLY B 356 MET B 501 SITE 4 AD1 13 HOH B 603 SITE 1 AD2 6 LEU B 196 ASP B 198 LEU B 203 HOH B 607 SITE 2 AD2 6 A D 26 HOH D 201 SITE 1 AD3 4 HOH B 614 C D 38 G D 39 HOH D 203 CRYST1 88.664 69.821 149.298 90.00 90.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011279 0.000000 0.000059 0.00000 SCALE2 0.000000 0.014322 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006698 0.00000