HEADER HORMONE 24-JAN-16 5HRQ TITLE INSULIN WITH PROLINE ANALOG HZP AT POSITION B28 IN THE R6 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN A-CHAIN; COMPND 3 CHAIN: A, C, E, G, I, K; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: INSULIN B-CHAIN; COMPND 7 CHAIN: B, D, F, H, J, L; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: INS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CAG18515; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE80L; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: INS; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: CAG18515; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PQE80L KEYWDS INSULIN, NON-CANONICAL AMINO ACID, HYDROXYPROLINE, NON-NATURAL AMINO KEYWDS 2 ACID, UNNATURAL AMINO ACID, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.LIEBLICH,K.Y.FANG,J.K.B.CAHN,D.A.TIRRELL REVDAT 3 15-JAN-20 5HRQ 1 REMARK REVDAT 2 12-JUL-17 5HRQ 1 JRNL REVDAT 1 25-JAN-17 5HRQ 0 JRNL AUTH S.A.LIEBLICH,K.Y.FANG,J.K.B.CAHN,J.RAWSON,J.LEBON,H.T.KU, JRNL AUTH 2 D.A.TIRRELL JRNL TITL 4S-HYDROXYLATION OF INSULIN AT PROB28 ACCELERATES HEXAMER JRNL TITL 2 DISSOCIATION AND DELAYS FIBRILLATION. JRNL REF J. AM. CHEM. SOC. V. 139 8384 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28598606 JRNL DOI 10.1021/JACS.7B00794 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 75363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3951 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4122 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2349 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.62000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.042 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.026 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.348 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2574 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2322 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3485 ; 1.259 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5324 ; 1.127 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 400 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2909 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 653 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1247 ; 5.000 ; 2.033 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1246 ; 5.013 ; 2.028 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1515 ; 5.657 ; 2.972 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1516 ; 5.657 ; 2.976 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1327 ;11.450 ; 2.528 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1328 ;11.446 ; 2.527 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1955 ;13.169 ; 3.630 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2448 ;13.051 ;22.223 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2449 ;13.048 ;22.220 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4896 ; 7.279 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 37 ;26.701 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4942 ;23.676 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HRQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL K-B FOCUSING MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79335 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 56.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 300 MM TRIS, 17 MM ZINC ACETATE, 1% REMARK 280 PHENOL, 7.5% ACETONE, 2.675 M SODIUM CITRATE, PH 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.34000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -236.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE F 1 REMARK 465 THR J 30 REMARK 465 THR L 30 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 14 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 THR B 30 OG1 CG2 REMARK 470 GLU C 4 CD OE1 OE2 REMARK 470 PHE D 1 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS D 29 CG CD CE NZ REMARK 470 LYS F 29 CG CD CE NZ REMARK 470 GLU G 4 CG CD OE1 OE2 REMARK 470 LYS H 29 NZ REMARK 470 TYR I 14 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU L 21 CG CD OE1 OE2 REMARK 470 ARG L 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 29 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 LEU D 17 O HOH B 410 1.71 REMARK 500 CD1 LEU D 17 O HOH D 214 1.78 REMARK 500 OE2 GLU F 13 O HOH F 201 1.88 REMARK 500 OD1 ASN D 3 O HOH D 201 1.95 REMARK 500 OE1 GLU F 13 O HOH F 201 2.01 REMARK 500 CD GLU F 13 O HOH F 201 2.13 REMARK 500 OE2 GLU D 13 O HOH D 202 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OXT ASN C 21 ND2 ASN J 3 2548 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 4 CD GLU A 4 OE1 0.088 REMARK 500 GLU H 13 CD GLU H 13 OE2 0.070 REMARK 500 SER K 12 CB SER K 12 OG 0.291 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HZP B 28 CA - C - N ANGL. DEV. = -16.8 DEGREES REMARK 500 HZP B 28 O - C - N ANGL. DEV. = -14.5 DEGREES REMARK 500 THR L 27 O - C - N ANGL. DEV. = -10.2 DEGREES REMARK 500 LYS L 29 C - N - CA ANGL. DEV. = 18.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HZP B 28 -53.24 -17.62 REMARK 500 THR I 8 -52.31 -120.87 REMARK 500 THR I 8 -54.02 -120.87 REMARK 500 THR I 8 -53.94 -120.87 REMARK 500 VAL J 2 37.20 -81.94 REMARK 500 VAL L 2 34.95 -84.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR B 27 11.55 REMARK 500 HZP B 28 31.48 REMARK 500 THR D 27 -11.31 REMARK 500 HZP D 28 15.14 REMARK 500 THR L 27 14.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 206 DISTANCE = 8.27 ANGSTROMS REMARK 525 HOH A 207 DISTANCE = 12.03 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 10 NE2 REMARK 620 2 HIS F 10 NE2 106.5 REMARK 620 3 HIS J 10 NE2 108.0 106.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 10 NE2 REMARK 620 2 HIS H 10 NE2 106.6 REMARK 620 3 HIS L 10 NE2 106.4 107.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH G 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL H 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH I 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPH K 101 DBREF 5HRQ A 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ B 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5HRQ C 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ D 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5HRQ E 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ F 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5HRQ G 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ H 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5HRQ I 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ J 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5HRQ K 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 5HRQ L 1 30 UNP P01308 INS_HUMAN 25 54 SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 30 THR HZP LYS THR SEQRES 1 C 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 C 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 D 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 D 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 D 30 THR HZP LYS THR SEQRES 1 E 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 E 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 F 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 F 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 F 30 THR HZP LYS THR SEQRES 1 G 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 G 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 H 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 H 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 H 30 THR HZP LYS THR SEQRES 1 I 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 I 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 J 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 J 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 J 30 THR HZP LYS THR SEQRES 1 K 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 K 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 L 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 L 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 L 30 THR HZP LYS THR MODRES 5HRQ HZP B 28 PRO MODIFIED RESIDUE MODRES 5HRQ HZP D 28 PRO MODIFIED RESIDUE MODRES 5HRQ HZP F 28 PRO MODIFIED RESIDUE MODRES 5HRQ HZP H 28 PRO MODIFIED RESIDUE MODRES 5HRQ HZP J 28 PRO MODIFIED RESIDUE MODRES 5HRQ HZP L 28 PRO MODIFIED RESIDUE HET HZP B 28 8 HET HZP D 28 8 HET HZP F 28 8 HET HZP H 28 8 HET HZP J 28 8 HET HZP L 28 8 HET IPH A 101 7 HET ZN B 301 1 HET IPH C 101 7 HET ZN D 101 1 HET IPH E 101 7 HET CL F 101 1 HET IPH G 101 7 HET CL H 101 1 HET IPH I 101 7 HET IPH K 101 7 HETNAM HZP (4S)-4-HYDROXY-L-PROLINE HETNAM IPH PHENOL HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 HZP 6(C5 H9 N O3) FORMUL 13 IPH 6(C6 H6 O) FORMUL 14 ZN 2(ZN 2+) FORMUL 18 CL 2(CL 1-) FORMUL 23 HOH *157(H2 O) HELIX 1 AA1 GLY A 1 CYS A 7 1 7 HELIX 2 AA2 SER A 12 ASN A 18 1 7 HELIX 3 AA3 VAL B 2 GLY B 20 1 19 HELIX 4 AA4 GLU B 21 GLY B 23 5 3 HELIX 5 AA5 ILE C 2 CYS C 7 1 6 HELIX 6 AA6 SER C 12 ASN C 18 1 7 HELIX 7 AA7 VAL D 2 GLY D 20 1 19 HELIX 8 AA8 GLU D 21 GLY D 23 5 3 HELIX 9 AA9 ILE E 2 CYS E 7 1 6 HELIX 10 AB1 SER E 12 ASN E 18 1 7 HELIX 11 AB2 ASN F 3 GLY F 20 1 18 HELIX 12 AB3 GLU F 21 GLY F 23 5 3 HELIX 13 AB4 ILE G 2 CYS G 7 1 6 HELIX 14 AB5 SER G 12 ASN G 18 1 7 HELIX 15 AB6 VAL H 2 GLY H 20 1 19 HELIX 16 AB7 GLU H 21 GLY H 23 5 3 HELIX 17 AB8 ILE I 2 CYS I 7 1 6 HELIX 18 AB9 SER I 12 ASN I 18 1 7 HELIX 19 AC1 VAL J 2 GLY J 20 1 19 HELIX 20 AC2 GLU J 21 GLY J 23 5 3 HELIX 21 AC3 ILE K 2 CYS K 7 1 6 HELIX 22 AC4 SER K 12 ASN K 18 1 7 HELIX 23 AC5 VAL L 2 CYS L 19 1 18 SHEET 1 AA1 2 PHE B 24 TYR B 26 0 SHEET 2 AA1 2 PHE D 24 TYR D 26 -1 O TYR D 26 N PHE B 24 SHEET 1 AA2 2 PHE F 24 TYR F 26 0 SHEET 2 AA2 2 PHE H 24 TYR H 26 -1 O TYR H 26 N PHE F 24 SHEET 1 AA3 2 PHE J 24 TYR J 26 0 SHEET 2 AA3 2 PHE L 24 TYR L 26 -1 O PHE L 24 N TYR J 26 SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.05 SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.13 SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.04 SSBOND 4 CYS C 6 CYS C 11 1555 1555 2.03 SSBOND 5 CYS C 7 CYS D 7 1555 1555 2.12 SSBOND 6 CYS C 20 CYS D 19 1555 1555 2.03 SSBOND 7 CYS E 6 CYS E 11 1555 1555 2.03 SSBOND 8 CYS E 7 CYS F 7 1555 1555 2.11 SSBOND 9 CYS E 20 CYS F 19 1555 1555 2.03 SSBOND 10 CYS G 6 CYS G 11 1555 1555 2.06 SSBOND 11 CYS G 7 CYS H 7 1555 1555 2.11 SSBOND 12 CYS G 20 CYS H 19 1555 1555 2.02 SSBOND 13 CYS I 6 CYS I 11 1555 1555 2.04 SSBOND 14 CYS I 7 CYS J 7 1555 1555 2.08 SSBOND 15 CYS I 20 CYS J 19 1555 1555 2.02 SSBOND 16 CYS K 6 CYS K 11 1555 1555 2.08 SSBOND 17 CYS K 7 CYS L 7 1555 1555 2.07 SSBOND 18 CYS K 20 CYS L 19 1555 1555 2.00 LINK NE2 HIS B 10 ZN ZN B 301 1555 1555 2.03 LINK C THR B 27 N HZP B 28 1555 1555 1.33 LINK C HZP B 28 N LYS B 29 1555 1555 1.35 LINK NE2 HIS D 10 ZN ZN D 101 1555 1555 2.06 LINK C THR D 27 N HZP D 28 1555 1555 1.34 LINK C HZP D 28 N LYS D 29 1555 1555 1.33 LINK NE2 HIS F 10 ZN ZN B 301 1555 1555 2.07 LINK C THR F 27 N HZP F 28 1555 1555 1.32 LINK C HZP F 28 N LYS F 29 1555 1555 1.32 LINK NE2 HIS H 10 ZN ZN D 101 1555 1555 2.02 LINK C THR H 27 N HZP H 28 1555 1555 1.34 LINK C HZP H 28 N LYS H 29 1555 1555 1.31 LINK NE2 HIS J 10 ZN ZN B 301 1555 1555 2.04 LINK C THR J 27 N HZP J 28 1555 1555 1.35 LINK C HZP J 28 N LYS J 29 1555 1555 1.34 LINK NE2 HIS L 10 ZN ZN D 101 1555 1555 2.06 LINK C THR L 27 N HZP L 28 1555 1555 1.31 LINK C HZP L 28 N LYS L 29 1555 1555 1.36 SITE 1 AC1 6 CYS A 6 SER A 9 ILE A 10 CYS A 11 SITE 2 AC1 6 LEU B 11 HIS F 5 SITE 1 AC2 4 HIS B 10 HIS F 10 CL F 101 HIS J 10 SITE 1 AC3 4 CYS C 6 ILE C 10 CYS C 11 LEU D 11 SITE 1 AC4 4 HIS D 10 HIS H 10 CL H 101 HIS L 10 SITE 1 AC5 4 CYS E 6 ILE E 10 CYS E 11 LEU F 11 SITE 1 AC6 4 HIS B 10 ZN B 301 HIS F 10 HIS J 10 SITE 1 AC7 6 HIS D 5 CYS G 6 SER G 9 ILE G 10 SITE 2 AC7 6 CYS G 11 LEU H 11 SITE 1 AC8 4 HIS D 10 ZN D 101 HIS H 10 HIS L 10 SITE 1 AC9 5 HIS B 5 CYS I 6 ILE I 10 CYS I 11 SITE 2 AC9 5 LEU J 11 SITE 1 AD1 5 HIS H 5 CYS K 6 ILE K 10 CYS K 11 SITE 2 AD1 5 LEU L 11 CRYST1 47.156 60.680 60.665 90.00 110.82 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021206 0.000000 0.008063 0.00000 SCALE2 0.000000 0.016480 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017635 0.00000