HEADER TRANSPORT PROTEIN 25-JAN-16 5HSG TITLE CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN FROM TITLE 2 KLEBSIELLA PNEUMONIAE (KPN_01730, TARGET EFI-511059), APO OPEN TITLE 3 STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORTER, NUCLEOTIDE BINDING/ATPASE COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 31-317; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 272620; SOURCE 4 STRAIN: ATCC 700721 / MGH 78578; SOURCE 5 GENE: KPN_01730; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ABC TRANSPORTER SOLUTE BINDING PROTEIN, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.ROTH,M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH,J.KOSS, AUTHOR 2 S.R.WASSERMAN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 1 02-MAR-16 5HSG 0 JRNL AUTH Y.ROTH,M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO, JRNL AUTH 2 J.BENACH,J.KOSS,S.R.WASSERMAN,J.A.GERLT,S.C.ALMO, JRNL AUTH 3 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING JRNL TITL 2 PROTEIN FROM KLEBSIELLA PNEUMONIAE (KPN_01730, TARGET JRNL TITL 3 EFI-511059), APO OPEN STRUCTURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 68101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7337 - 3.7486 0.99 3218 171 0.1439 0.1848 REMARK 3 2 3.7486 - 2.9762 1.00 3120 142 0.1437 0.1820 REMARK 3 3 2.9762 - 2.6002 1.00 3079 146 0.1513 0.1598 REMARK 3 4 2.6002 - 2.3625 1.00 3061 154 0.1409 0.1575 REMARK 3 5 2.3625 - 2.1933 1.00 2983 167 0.1369 0.1482 REMARK 3 6 2.1933 - 2.0640 0.99 3036 134 0.1400 0.1577 REMARK 3 7 2.0640 - 1.9606 0.99 2968 158 0.1494 0.1630 REMARK 3 8 1.9606 - 1.8753 0.97 2898 171 0.1517 0.1669 REMARK 3 9 1.8753 - 1.8031 0.96 2880 149 0.1523 0.1857 REMARK 3 10 1.8031 - 1.7409 0.95 2859 140 0.1515 0.1812 REMARK 3 11 1.7409 - 1.6865 0.92 2748 153 0.1492 0.1689 REMARK 3 12 1.6865 - 1.6383 0.91 2722 142 0.1470 0.1749 REMARK 3 13 1.6383 - 1.5951 0.90 2727 111 0.1431 0.1801 REMARK 3 14 1.5951 - 1.5562 0.89 2643 143 0.1499 0.1550 REMARK 3 15 1.5562 - 1.5208 0.90 2626 145 0.1515 0.1852 REMARK 3 16 1.5208 - 1.4885 0.88 2635 146 0.1626 0.1773 REMARK 3 17 1.4885 - 1.4587 0.88 2573 145 0.1731 0.1885 REMARK 3 18 1.4587 - 1.4312 0.86 2549 148 0.1891 0.2012 REMARK 3 19 1.4312 - 1.4056 0.86 2552 123 0.1914 0.2050 REMARK 3 20 1.4056 - 1.3818 0.83 2463 126 0.1945 0.2185 REMARK 3 21 1.3818 - 1.3595 0.82 2387 143 0.1993 0.2134 REMARK 3 22 1.3595 - 1.3386 0.75 2238 118 0.2126 0.2057 REMARK 3 23 1.3386 - 1.3189 0.69 2015 94 0.2140 0.2213 REMARK 3 24 1.3189 - 1.3003 0.59 1758 94 0.2194 0.2425 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2216 REMARK 3 ANGLE : 1.242 3035 REMARK 3 CHIRALITY : 0.071 357 REMARK 3 PLANARITY : 0.006 414 REMARK 3 DIHEDRAL : 13.090 813 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2922 43.7018 43.8348 REMARK 3 T TENSOR REMARK 3 T11: 0.1118 T22: 0.0978 REMARK 3 T33: 0.1039 T12: -0.0025 REMARK 3 T13: 0.0009 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.5820 L22: 0.8481 REMARK 3 L33: 1.3527 L12: -0.0627 REMARK 3 L13: 0.3915 L23: 0.0668 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: 0.0021 S13: -0.0012 REMARK 3 S21: -0.0800 S22: 0.0420 S23: -0.0119 REMARK 3 S31: -0.0284 S32: -0.0020 S33: -0.0571 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7319 36.1948 58.4219 REMARK 3 T TENSOR REMARK 3 T11: 0.1053 T22: 0.0995 REMARK 3 T33: 0.1270 T12: -0.0087 REMARK 3 T13: -0.0030 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.6244 L22: 0.2912 REMARK 3 L33: 0.8296 L12: -0.2292 REMARK 3 L13: -0.5517 L23: 0.2697 REMARK 3 S TENSOR REMARK 3 S11: -0.0639 S12: -0.0048 S13: -0.0552 REMARK 3 S21: 0.0252 S22: -0.0260 S23: 0.0602 REMARK 3 S31: 0.0864 S32: -0.0751 S33: 0.0856 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4967 50.6191 70.1966 REMARK 3 T TENSOR REMARK 3 T11: 0.1295 T22: 0.1532 REMARK 3 T33: 0.1404 T12: 0.0216 REMARK 3 T13: -0.0069 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 0.9393 L22: 0.6424 REMARK 3 L33: 0.9051 L12: 0.0363 REMARK 3 L13: -0.1740 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: 0.0363 S12: -0.0775 S13: 0.1445 REMARK 3 S21: 0.0001 S22: 0.0008 S23: 0.1060 REMARK 3 S31: -0.1879 S32: -0.1367 S33: -0.0289 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3688 41.7297 61.8039 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.1193 REMARK 3 T33: 0.1269 T12: 0.0044 REMARK 3 T13: -0.0081 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.7517 L22: 0.5762 REMARK 3 L33: 1.5435 L12: -0.5418 REMARK 3 L13: -0.8898 L23: 0.9637 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: -0.1246 S13: 0.0073 REMARK 3 S21: -0.0151 S22: 0.0385 S23: 0.0325 REMARK 3 S31: 0.0084 S32: 0.1087 S33: 0.0010 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70639 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.2 REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : 0.87600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELX, MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 5 MM DTT, REMARK 280 10 MM L-SORBITOL); RESERVOIR (MCSG1 B4)(0.2 M MAGNESIUM CHLORIDE, REMARK 280 0.1 M BIS-TRIS PH 6.5, 25 %(W/V) PEG 3350); CRYOPROTECTION (20% REMARK 280 DIETHYLENE GLYCOL, 80% RESERVOIR), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.77400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.55750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.55750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.77400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 VAL A 18 REMARK 465 ASP A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 THR A 22 REMARK 465 GLU A 23 REMARK 465 ASN A 24 REMARK 465 LEU A 25 REMARK 465 TYR A 26 REMARK 465 PHE A 27 REMARK 465 GLN A 28 REMARK 465 SER A 29 REMARK 465 MSE A 30 REMARK 465 ALA A 31 REMARK 465 LYS A 317 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 306 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 890 O HOH A 898 2.05 REMARK 500 O HOH A 503 O HOH A 715 2.08 REMARK 500 O HOH A 511 O HOH A 756 2.12 REMARK 500 O HOH A 516 O HOH A 529 2.15 REMARK 500 O HOH A 581 O HOH A 798 2.15 REMARK 500 O HOH A 656 O HOH A 903 2.17 REMARK 500 O HOH A 504 O HOH A 829 2.17 REMARK 500 O HOH A 735 O HOH A 805 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 824 O HOH A 839 3655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 120 -91.35 76.90 REMARK 500 ASP A 244 11.93 -141.55 REMARK 500 ASP A 251 106.03 90.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 996 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 997 DISTANCE = 6.08 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 149 OD2 REMARK 620 2 HOH A 816 O 137.8 REMARK 620 3 HOH A 815 O 106.2 83.2 REMARK 620 4 HOH A 840 O 119.6 95.7 106.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-511059 RELATED DB: TARGETTRACK DBREF 5HSG A 31 317 UNP A6T990 A6T990_KLEP7 31 317 SEQADV 5HSG MSE A 8 UNP A6T990 INITIATING METHIONINE SEQADV 5HSG HIS A 9 UNP A6T990 EXPRESSION TAG SEQADV 5HSG HIS A 10 UNP A6T990 EXPRESSION TAG SEQADV 5HSG HIS A 11 UNP A6T990 EXPRESSION TAG SEQADV 5HSG HIS A 12 UNP A6T990 EXPRESSION TAG SEQADV 5HSG HIS A 13 UNP A6T990 EXPRESSION TAG SEQADV 5HSG HIS A 14 UNP A6T990 EXPRESSION TAG SEQADV 5HSG SER A 15 UNP A6T990 EXPRESSION TAG SEQADV 5HSG SER A 16 UNP A6T990 EXPRESSION TAG SEQADV 5HSG GLY A 17 UNP A6T990 EXPRESSION TAG SEQADV 5HSG VAL A 18 UNP A6T990 EXPRESSION TAG SEQADV 5HSG ASP A 19 UNP A6T990 EXPRESSION TAG SEQADV 5HSG LEU A 20 UNP A6T990 EXPRESSION TAG SEQADV 5HSG GLY A 21 UNP A6T990 EXPRESSION TAG SEQADV 5HSG THR A 22 UNP A6T990 EXPRESSION TAG SEQADV 5HSG GLU A 23 UNP A6T990 EXPRESSION TAG SEQADV 5HSG ASN A 24 UNP A6T990 EXPRESSION TAG SEQADV 5HSG LEU A 25 UNP A6T990 EXPRESSION TAG SEQADV 5HSG TYR A 26 UNP A6T990 EXPRESSION TAG SEQADV 5HSG PHE A 27 UNP A6T990 EXPRESSION TAG SEQADV 5HSG GLN A 28 UNP A6T990 EXPRESSION TAG SEQADV 5HSG SER A 29 UNP A6T990 EXPRESSION TAG SEQADV 5HSG MSE A 30 UNP A6T990 EXPRESSION TAG SEQRES 1 A 310 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 310 GLY THR GLU ASN LEU TYR PHE GLN SER MSE ALA GLY PRO SEQRES 3 A 310 THR TYR ALA LEU VAL GLN ILE ASN GLN GLN ALA LEU PHE SEQRES 4 A 310 PHE ASN LEU MSE ASN LYS GLY ALA GLN ASP ALA ALA LYS SEQRES 5 A 310 ALA SER GLY LYS ASP LEU VAL ILE PHE ASN SER ASN ASP SEQRES 6 A 310 ASN PRO VAL ALA GLN ASN ASP ALA ILE GLU ASN TYR ILE SEQRES 7 A 310 GLN GLN GLY VAL LYS GLY ILE LEU VAL ALA ALA ILE ASP SEQRES 8 A 310 VAL ASN GLY ILE MSE PRO ALA VAL LYS GLU ALA ALA ALA SEQRES 9 A 310 ALA ASN ILE PRO VAL ILE ALA ILE ASP ALA VAL LEU PRO SEQRES 10 A 310 ALA GLY PRO GLN ALA ALA GLN VAL GLY VAL ASP ASN ILE SEQRES 11 A 310 GLU GLY GLY ARG ILE ILE GLY GLN TYR PHE VAL ASP TYR SEQRES 12 A 310 VAL GLN LYS GLU MSE GLY GLY GLN ALA ARG LEU GLY ILE SEQRES 13 A 310 VAL GLY ALA LEU ASN SER ALA ILE GLN ASN GLN ARG GLN SEQRES 14 A 310 LYS GLY PHE GLU GLU THR LEU LYS SER ASN PRO LYS ILE SEQRES 15 A 310 THR ILE ALA ASN VAL VAL ASP GLY GLN ASN VAL GLN ASP SEQRES 16 A 310 LYS ALA MSE THR ALA ALA GLU ASN LEU ILE THR GLY ASN SEQRES 17 A 310 PRO ASP LEU THR ALA ILE TYR ALA THR GLY GLU PRO ALA SEQRES 18 A 310 LEU LEU GLY ALA ILE ALA ALA VAL GLU ASN GLN GLY ARG SEQRES 19 A 310 GLN LYS ASP ILE LYS VAL PHE GLY TRP ASP LEU THR ALA SEQRES 20 A 310 LYS ALA ILE SER GLY ILE ASP GLY GLY TYR VAL THR ALA SEQRES 21 A 310 VAL LEU GLN GLN ASP PRO GLU LYS MSE GLY ALA GLU ALA SEQRES 22 A 310 LEU ASN ALA LEU ASN SER ILE THR SER GLY LYS THR VAL SEQRES 23 A 310 PRO LYS THR ILE LEU VAL PRO ALA THR VAL VAL THR LYS SEQRES 24 A 310 ALA ASN VAL ASP SER TYR ARG PRO LEU PHE LYS MODRES 5HSG MSE A 50 MET MODIFIED RESIDUE MODRES 5HSG MSE A 103 MET MODIFIED RESIDUE MODRES 5HSG MSE A 155 MET MODIFIED RESIDUE MODRES 5HSG MSE A 205 MET MODIFIED RESIDUE MODRES 5HSG MSE A 276 MET MODIFIED RESIDUE HET MSE A 50 17 HET MSE A 103 17 HET MSE A 155 17 HET MSE A 205 17 HET MSE A 276 17 HET MG A 401 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 MG MG 2+ FORMUL 3 HOH *497(H2 O) HELIX 1 AA1 ALA A 44 SER A 61 1 18 HELIX 2 AA2 ASN A 73 GLN A 87 1 15 HELIX 3 AA3 ILE A 102 ALA A 112 1 11 HELIX 4 AA4 ASP A 135 MSE A 155 1 21 HELIX 5 AA5 SER A 169 LYS A 184 1 16 HELIX 6 AA6 VAL A 200 ASN A 215 1 16 HELIX 7 AA7 GLY A 225 GLN A 239 1 15 HELIX 8 AA8 THR A 253 GLY A 262 1 10 HELIX 9 AA9 ASP A 272 SER A 289 1 18 HELIX 10 AB1 ASN A 308 PHE A 316 5 9 SHEET 1 AA1 6 LEU A 65 ASN A 69 0 SHEET 2 AA1 6 TYR A 35 GLN A 39 1 N LEU A 37 O PHE A 68 SHEET 3 AA1 6 GLY A 91 VAL A 94 1 O LEU A 93 N ALA A 36 SHEET 4 AA1 6 VAL A 116 ILE A 119 1 O ILE A 119 N VAL A 94 SHEET 5 AA1 6 ALA A 130 GLY A 133 1 O VAL A 132 N ALA A 118 SHEET 6 AA1 6 THR A 296 LEU A 298 1 O ILE A 297 N GLN A 131 SHEET 1 AA2 6 ILE A 189 ASP A 196 0 SHEET 2 AA2 6 ALA A 159 GLY A 165 1 N LEU A 161 O ALA A 192 SHEET 3 AA2 6 ALA A 220 ALA A 223 1 O TYR A 222 N VAL A 164 SHEET 4 AA2 6 LYS A 246 TRP A 250 1 O PHE A 248 N ILE A 221 SHEET 5 AA2 6 VAL A 265 GLN A 270 1 O LEU A 269 N GLY A 249 SHEET 6 AA2 6 THR A 302 VAL A 304 -1 O VAL A 304 N VAL A 268 LINK C LEU A 49 N MSE A 50 1555 1555 1.32 LINK C MSE A 50 N ASN A 51 1555 1555 1.34 LINK C ILE A 102 N MSE A 103 1555 1555 1.32 LINK C MSE A 103 N PRO A 104 1555 1555 1.34 LINK OD2 ASP A 149 MG MG A 401 1555 1555 2.30 LINK C GLU A 154 N MSE A 155 1555 1555 1.33 LINK C MSE A 155 N GLY A 156 1555 1555 1.33 LINK C ALA A 204 N MSE A 205 1555 1555 1.33 LINK C MSE A 205 N ATHR A 206 1555 1555 1.33 LINK C MSE A 205 N BTHR A 206 1555 1555 1.33 LINK C LYS A 275 N MSE A 276 1555 1555 1.33 LINK C MSE A 276 N GLY A 277 1555 1555 1.32 LINK MG MG A 401 O HOH A 816 1555 1555 2.47 LINK MG MG A 401 O HOH A 815 1555 4566 2.66 LINK MG MG A 401 O HOH A 840 1555 4566 2.69 SITE 1 AC1 6 ASP A 149 LYS A 153 ILE A 189 HOH A 815 SITE 2 AC1 6 HOH A 816 HOH A 840 CRYST1 39.548 48.800 157.115 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025286 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006365 0.00000