HEADER TRANSFERASE 26-JAN-16 5HT6 TITLE CRYSTAL STRUCTURE OF THE SET DOMAIN OF THE HUMAN MLL5 TITLE 2 METHYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE 2E; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 323-458; COMPND 5 SYNONYM: LYSINE N-METHYLTRANSFERASE 2E,MYELOID/LYMPHOID OR MIXED- COMPND 6 LINEAGE LEUKEMIA PROTEIN 5; COMPND 7 EC: 2.1.1.43; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KMT2E, MLL5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SET DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.LE MAIRE,S.MAS-Y-MAS,C.DUMAS,A.LEBEDEV REVDAT 1 16-NOV-16 5HT6 0 JRNL AUTH S.MAS-Y-MAS,M.BARBON,C.TEYSSIER,H.DEMENE,J.E.CARVALHO, JRNL AUTH 2 L.E.BIRD,A.LEBEDEV,J.FATTORI,M.SCHUBERT,C.DUMAS,W.BOURGUET, JRNL AUTH 3 A.LE MAIRE JRNL TITL THE HUMAN MIXED LINEAGE LEUKEMIA 5 (MLL5), A SEQUENTIALLY JRNL TITL 2 AND STRUCTURALLY DIVERGENT SET DOMAIN-CONTAINING PROTEIN JRNL TITL 3 WITH NO INTRINSIC CATALYTIC ACTIVITY. JRNL REF PLOS ONE V. 11 65139 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27812132 JRNL DOI 10.1371/JOURNAL.PONE.0165139 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 17250 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.9484 - 4.3525 1.00 1885 158 0.1901 0.2080 REMARK 3 2 4.3525 - 3.4549 1.00 1797 159 0.1788 0.2066 REMARK 3 3 3.4549 - 3.0183 1.00 1748 186 0.2149 0.2520 REMARK 3 4 3.0183 - 2.7423 1.00 1766 137 0.2269 0.2603 REMARK 3 5 2.7423 - 2.5458 1.00 1784 132 0.2290 0.2750 REMARK 3 6 2.5458 - 2.3957 1.00 1742 144 0.2391 0.3242 REMARK 3 7 2.3957 - 2.2757 1.00 1770 127 0.2517 0.3561 REMARK 3 8 2.2757 - 2.1766 1.00 1747 118 0.2526 0.2775 REMARK 3 9 2.1766 - 2.0928 0.97 1705 145 0.2667 0.3435 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1988 REMARK 3 ANGLE : 0.841 2676 REMARK 3 CHIRALITY : 0.031 274 REMARK 3 PLANARITY : 0.005 343 REMARK 3 DIHEDRAL : 13.084 747 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3238 -20.0689 30.2266 REMARK 3 T TENSOR REMARK 3 T11: 0.8227 T22: 0.8808 REMARK 3 T33: 0.8190 T12: -0.2079 REMARK 3 T13: 0.1985 T23: 0.1936 REMARK 3 L TENSOR REMARK 3 L11: 3.7391 L22: 2.7249 REMARK 3 L33: 7.1879 L12: -0.7673 REMARK 3 L13: 2.2312 L23: -1.2043 REMARK 3 S TENSOR REMARK 3 S11: -0.7875 S12: -0.5659 S13: -1.3779 REMARK 3 S21: 0.9614 S22: 0.4498 S23: 0.8801 REMARK 3 S31: 0.7013 S32: -1.9588 S33: 0.1054 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9049 -23.1149 26.2121 REMARK 3 T TENSOR REMARK 3 T11: 0.9847 T22: -0.0367 REMARK 3 T33: 0.6846 T12: 0.3919 REMARK 3 T13: 0.4761 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 3.5346 L22: 1.2806 REMARK 3 L33: 0.9555 L12: -2.1313 REMARK 3 L13: -1.1740 L23: 0.6808 REMARK 3 S TENSOR REMARK 3 S11: -0.5180 S12: -0.4133 S13: -0.6630 REMARK 3 S21: 0.3960 S22: -0.1062 S23: 0.2421 REMARK 3 S31: 0.7879 S32: 0.0628 S33: -0.0630 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1654 -14.5878 19.1111 REMARK 3 T TENSOR REMARK 3 T11: 0.4692 T22: 0.2686 REMARK 3 T33: 0.5106 T12: -0.1666 REMARK 3 T13: 0.0334 T23: -0.0842 REMARK 3 L TENSOR REMARK 3 L11: 8.7971 L22: 4.5517 REMARK 3 L33: 5.1143 L12: -5.9643 REMARK 3 L13: -0.8416 L23: -1.0221 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: 0.4956 S13: -0.8698 REMARK 3 S21: -0.3321 S22: -0.0584 S23: 1.1215 REMARK 3 S31: 0.9758 S32: -0.4571 S33: 0.0130 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2659 3.1225 15.7706 REMARK 3 T TENSOR REMARK 3 T11: 0.3013 T22: 0.5317 REMARK 3 T33: 0.5631 T12: 0.1257 REMARK 3 T13: 0.0197 T23: 0.0661 REMARK 3 L TENSOR REMARK 3 L11: 4.3161 L22: 6.6713 REMARK 3 L33: 8.8797 L12: -3.3756 REMARK 3 L13: -2.5418 L23: 1.0112 REMARK 3 S TENSOR REMARK 3 S11: 0.5955 S12: 1.2249 S13: 0.1454 REMARK 3 S21: -0.4971 S22: -0.7106 S23: 0.6796 REMARK 3 S31: -0.8978 S32: -1.4219 S33: 0.0857 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6906 2.5154 25.0091 REMARK 3 T TENSOR REMARK 3 T11: 0.4189 T22: 0.6202 REMARK 3 T33: 0.4086 T12: 0.1294 REMARK 3 T13: 0.1465 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 3.8815 L22: 4.7887 REMARK 3 L33: 6.5855 L12: -0.5002 REMARK 3 L13: -0.2214 L23: -3.0361 REMARK 3 S TENSOR REMARK 3 S11: -0.2404 S12: 0.0542 S13: 0.3014 REMARK 3 S21: 0.7951 S22: 0.2014 S23: 0.9254 REMARK 3 S31: -0.7421 S32: -1.7778 S33: 0.0154 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1905 -0.7324 18.0104 REMARK 3 T TENSOR REMARK 3 T11: 0.1592 T22: 0.2718 REMARK 3 T33: 0.3324 T12: -0.0417 REMARK 3 T13: 0.0187 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.3312 L22: 4.3205 REMARK 3 L33: 7.1620 L12: -0.4929 REMARK 3 L13: -1.5529 L23: -0.3836 REMARK 3 S TENSOR REMARK 3 S11: 0.2778 S12: -0.2685 S13: 0.3531 REMARK 3 S21: 0.0857 S22: -0.0888 S23: 0.2517 REMARK 3 S31: -0.2228 S32: 0.1036 S33: -0.0922 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0905 -7.0014 19.0781 REMARK 3 T TENSOR REMARK 3 T11: 0.2628 T22: 0.7625 REMARK 3 T33: 0.7614 T12: -0.1781 REMARK 3 T13: 0.0815 T23: -0.0779 REMARK 3 L TENSOR REMARK 3 L11: 2.2506 L22: 7.6825 REMARK 3 L33: 4.1996 L12: 1.4209 REMARK 3 L13: 0.0354 L23: -0.5500 REMARK 3 S TENSOR REMARK 3 S11: -0.2611 S12: -0.3446 S13: -0.3073 REMARK 3 S21: -0.0463 S22: -0.3375 S23: 1.4393 REMARK 3 S31: 0.2538 S32: -2.0115 S33: 0.0815 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5549 -11.0593 30.5149 REMARK 3 T TENSOR REMARK 3 T11: 0.4834 T22: 0.3183 REMARK 3 T33: 0.3272 T12: -0.0358 REMARK 3 T13: 0.1288 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 5.9337 L22: 3.9068 REMARK 3 L33: 6.1965 L12: -0.9866 REMARK 3 L13: 1.5697 L23: 0.3299 REMARK 3 S TENSOR REMARK 3 S11: -0.3363 S12: -0.2225 S13: -0.1803 REMARK 3 S21: 0.5370 S22: 0.1717 S23: 0.5859 REMARK 3 S31: 1.1430 S32: -0.4788 S33: 0.1334 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9787 -10.6181 15.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.3290 T22: 0.2226 REMARK 3 T33: 0.2845 T12: 0.0211 REMARK 3 T13: -0.0138 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 4.1480 L22: 5.4180 REMARK 3 L33: 1.4596 L12: -1.1140 REMARK 3 L13: -1.8748 L23: -1.2639 REMARK 3 S TENSOR REMARK 3 S11: -0.1524 S12: 0.4634 S13: -0.7204 REMARK 3 S21: -0.1612 S22: -0.0805 S23: 0.2426 REMARK 3 S31: 1.2310 S32: 0.3080 S33: 0.1037 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4368 -15.5311 22.6720 REMARK 3 T TENSOR REMARK 3 T11: 0.5608 T22: 0.2097 REMARK 3 T33: 0.2873 T12: 0.0896 REMARK 3 T13: 0.0235 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 4.6884 L22: 5.5110 REMARK 3 L33: 4.5328 L12: -1.2827 REMARK 3 L13: 0.3492 L23: -2.1877 REMARK 3 S TENSOR REMARK 3 S11: -0.1993 S12: -0.0206 S13: -0.5791 REMARK 3 S21: 0.3102 S22: 0.3172 S23: 0.4769 REMARK 3 S31: 1.2262 S32: 0.1389 S33: -0.1688 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9634 -1.0651 31.5384 REMARK 3 T TENSOR REMARK 3 T11: 0.4378 T22: 0.3098 REMARK 3 T33: 0.3217 T12: -0.0139 REMARK 3 T13: 0.0069 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.8488 L22: 7.8398 REMARK 3 L33: 4.1854 L12: -1.1083 REMARK 3 L13: -1.2649 L23: 5.4160 REMARK 3 S TENSOR REMARK 3 S11: -0.3793 S12: -0.0924 S13: 0.1550 REMARK 3 S21: 0.5107 S22: 0.7178 S23: -0.0160 REMARK 3 S31: -0.3407 S32: 0.1699 S33: -0.2875 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0516 8.2523 32.8661 REMARK 3 T TENSOR REMARK 3 T11: 0.6013 T22: 0.5403 REMARK 3 T33: 0.4944 T12: -0.1861 REMARK 3 T13: -0.1437 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 7.9127 L22: 7.1775 REMARK 3 L33: 2.0482 L12: -1.1776 REMARK 3 L13: 1.2520 L23: 0.7738 REMARK 3 S TENSOR REMARK 3 S11: 0.4971 S12: 0.5148 S13: -0.8975 REMARK 3 S21: -0.0714 S22: 0.1797 S23: -0.3397 REMARK 3 S31: 0.1170 S32: 0.9275 S33: -0.7674 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5121 21.9138 -8.3893 REMARK 3 T TENSOR REMARK 3 T11: 0.8450 T22: 0.4594 REMARK 3 T33: 0.4143 T12: 0.1379 REMARK 3 T13: 0.1420 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 6.5308 L22: 6.3300 REMARK 3 L33: 5.5089 L12: 1.7066 REMARK 3 L13: 1.3663 L23: -2.2008 REMARK 3 S TENSOR REMARK 3 S11: -0.5047 S12: 0.5408 S13: 0.0896 REMARK 3 S21: -0.1860 S22: 0.4528 S23: 0.4827 REMARK 3 S31: 0.2121 S32: -0.3902 S33: 0.0406 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1521 15.8856 1.4821 REMARK 3 T TENSOR REMARK 3 T11: 0.6655 T22: 0.3706 REMARK 3 T33: 0.5094 T12: 0.3174 REMARK 3 T13: 0.1626 T23: 0.1756 REMARK 3 L TENSOR REMARK 3 L11: 4.6847 L22: 5.6509 REMARK 3 L33: 4.2740 L12: 4.3386 REMARK 3 L13: -1.0335 L23: -3.5120 REMARK 3 S TENSOR REMARK 3 S11: 0.3001 S12: -0.6021 S13: 0.3018 REMARK 3 S21: 0.0091 S22: 0.4887 S23: 1.2258 REMARK 3 S31: -0.8335 S32: -0.5775 S33: -0.3726 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7905 0.0459 5.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.5563 T22: 0.8354 REMARK 3 T33: 0.9803 T12: -0.0728 REMARK 3 T13: -0.2502 T23: 0.1944 REMARK 3 L TENSOR REMARK 3 L11: 5.7931 L22: 2.1466 REMARK 3 L33: 7.6509 L12: 1.0847 REMARK 3 L13: 0.3817 L23: -3.1740 REMARK 3 S TENSOR REMARK 3 S11: 0.6151 S12: -0.3678 S13: -0.8454 REMARK 3 S21: -0.6837 S22: 0.7755 S23: 0.9805 REMARK 3 S31: 1.2373 S32: -1.9954 S33: -0.9618 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0838 0.8139 -3.3788 REMARK 3 T TENSOR REMARK 3 T11: 0.9768 T22: 1.3861 REMARK 3 T33: 1.0471 T12: -0.0667 REMARK 3 T13: -0.3883 T23: 0.2229 REMARK 3 L TENSOR REMARK 3 L11: 0.3115 L22: 3.1960 REMARK 3 L33: 3.5883 L12: 0.3459 REMARK 3 L13: 0.0575 L23: -2.7728 REMARK 3 S TENSOR REMARK 3 S11: 0.2225 S12: 0.2946 S13: 0.2185 REMARK 3 S21: -0.8567 S22: -0.3315 S23: 1.0485 REMARK 3 S31: 0.1982 S32: -1.4776 S33: 0.0204 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 79 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5698 1.2947 1.7002 REMARK 3 T TENSOR REMARK 3 T11: 0.4964 T22: 0.3877 REMARK 3 T33: 0.3491 T12: 0.0601 REMARK 3 T13: -0.0509 T23: 0.0525 REMARK 3 L TENSOR REMARK 3 L11: 4.4627 L22: 7.5988 REMARK 3 L33: 5.8431 L12: -1.8454 REMARK 3 L13: 0.0564 L23: -3.8720 REMARK 3 S TENSOR REMARK 3 S11: 0.0973 S12: 0.4608 S13: -0.0268 REMARK 3 S21: -1.7431 S22: 0.0556 S23: 0.2740 REMARK 3 S31: 0.8595 S32: -0.6488 S33: -0.1427 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9027 12.2847 0.2201 REMARK 3 T TENSOR REMARK 3 T11: 0.7111 T22: 1.0350 REMARK 3 T33: 0.6193 T12: 0.5468 REMARK 3 T13: -0.1901 T23: 0.2921 REMARK 3 L TENSOR REMARK 3 L11: 1.7622 L22: 3.7720 REMARK 3 L33: 1.5356 L12: -0.8750 REMARK 3 L13: 0.4854 L23: -2.4121 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.2616 S13: 0.0118 REMARK 3 S21: -0.6002 S22: 0.0324 S23: 0.5777 REMARK 3 S31: -0.7148 S32: -1.3102 S33: -0.3303 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4290 10.6237 -4.4633 REMARK 3 T TENSOR REMARK 3 T11: 1.1253 T22: 0.3751 REMARK 3 T33: 0.3884 T12: 0.1249 REMARK 3 T13: 0.1273 T23: 0.1071 REMARK 3 L TENSOR REMARK 3 L11: 2.1419 L22: 2.6521 REMARK 3 L33: 4.9878 L12: 1.2413 REMARK 3 L13: -0.1533 L23: -3.1234 REMARK 3 S TENSOR REMARK 3 S11: 0.1092 S12: 0.3346 S13: 0.3383 REMARK 3 S21: -1.2705 S22: -0.0409 S23: 0.2196 REMARK 3 S31: -0.3181 S32: -0.6837 S33: -0.1234 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8950 15.8622 -2.7744 REMARK 3 T TENSOR REMARK 3 T11: 0.7992 T22: 0.2187 REMARK 3 T33: 0.3335 T12: 0.1881 REMARK 3 T13: 0.1785 T23: 0.0511 REMARK 3 L TENSOR REMARK 3 L11: 1.3500 L22: 5.0437 REMARK 3 L33: 2.7257 L12: 1.3014 REMARK 3 L13: -0.6128 L23: -3.6554 REMARK 3 S TENSOR REMARK 3 S11: 0.3238 S12: 0.0066 S13: 0.2499 REMARK 3 S21: -0.1416 S22: 0.3159 S23: 0.2157 REMARK 3 S31: -1.0075 S32: -0.5375 S33: -0.3529 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9455 5.1834 -10.3361 REMARK 3 T TENSOR REMARK 3 T11: 1.9022 T22: 0.6789 REMARK 3 T33: 0.5921 T12: -0.0202 REMARK 3 T13: -0.2201 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 5.9009 L22: 2.9439 REMARK 3 L33: 1.8160 L12: -3.5503 REMARK 3 L13: 2.3695 L23: -0.5897 REMARK 3 S TENSOR REMARK 3 S11: 0.7374 S12: 0.4118 S13: -1.4263 REMARK 3 S21: -1.5874 S22: 0.4451 S23: 0.6471 REMARK 3 S31: 1.8525 S32: -1.1271 S33: -0.9716 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000213377. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07245 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17289 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.093 REMARK 200 RESOLUTION RANGE LOW (A) : 57.174 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.40 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : 0.39000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NH4CL, 12 % (W/V) PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.63333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.26667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.26667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.63333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 18 REMARK 465 PRO A 19 REMARK 465 THR A 20 REMARK 465 ASN A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 VAL A 29 REMARK 465 GLU A 30 REMARK 465 SER A 31 REMARK 465 HIS A 32 REMARK 465 ILE A 33 REMARK 465 GLN A 34 REMARK 465 LYS A 35 REMARK 465 ASN A 36 REMARK 465 ASP A 155 REMARK 465 GLY B 18 REMARK 465 PRO B 19 REMARK 465 THR B 20 REMARK 465 ASN B 21 REMARK 465 ASN B 22 REMARK 465 LEU B 23 REMARK 465 LEU B 24 REMARK 465 PHE B 25 REMARK 465 LYS B 26 REMARK 465 PRO B 27 REMARK 465 PRO B 28 REMARK 465 VAL B 29 REMARK 465 GLU B 30 REMARK 465 SER B 31 REMARK 465 HIS B 32 REMARK 465 ILE B 33 REMARK 465 GLN B 34 REMARK 465 LYS B 35 REMARK 465 ASN B 36 REMARK 465 ASP B 146 REMARK 465 TYR B 147 REMARK 465 GLY B 148 REMARK 465 ASN B 149 REMARK 465 ALA B 150 REMARK 465 LYS B 151 REMARK 465 TYR B 152 REMARK 465 LYS B 153 REMARK 465 VAL B 154 REMARK 465 ASP B 155 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 115 O HOH A 201 2.12 REMARK 500 OH TYR A 128 O HOH A 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 77.43 -53.76 REMARK 500 ASN A 99 -158.21 -123.95 REMARK 500 TYR B 70 -102.84 -124.33 REMARK 500 PHE B 71 -135.41 160.68 REMARK 500 PRO B 75 83.57 -54.97 REMARK 500 ASN B 99 -160.37 -114.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 5HT6 A 20 155 UNP Q8IZD2 KMT2E_HUMAN 323 458 DBREF 5HT6 B 20 155 UNP Q8IZD2 KMT2E_HUMAN 323 458 SEQADV 5HT6 GLY A 18 UNP Q8IZD2 EXPRESSION TAG SEQADV 5HT6 PRO A 19 UNP Q8IZD2 EXPRESSION TAG SEQADV 5HT6 ALA A 150 UNP Q8IZD2 CYS 453 ENGINEERED MUTATION SEQADV 5HT6 GLY B 18 UNP Q8IZD2 EXPRESSION TAG SEQADV 5HT6 PRO B 19 UNP Q8IZD2 EXPRESSION TAG SEQADV 5HT6 ALA B 150 UNP Q8IZD2 CYS 453 ENGINEERED MUTATION SEQRES 1 A 138 GLY PRO THR ASN ASN LEU LEU PHE LYS PRO PRO VAL GLU SEQRES 2 A 138 SER HIS ILE GLN LYS ASN LYS LYS ILE LEU LYS SER ALA SEQRES 3 A 138 LYS ASP LEU PRO PRO ASP ALA LEU ILE ILE GLU TYR ARG SEQRES 4 A 138 GLY LYS PHE MET LEU ARG GLU GLN PHE GLU ALA ASN GLY SEQRES 5 A 138 TYR PHE PHE LYS ARG PRO TYR PRO PHE VAL LEU PHE TYR SEQRES 6 A 138 SER LYS PHE HIS GLY LEU GLU MET CYS VAL ASP ALA ARG SEQRES 7 A 138 THR PHE GLY ASN GLU ALA ARG PHE ILE ARG ARG SER CYS SEQRES 8 A 138 THR PRO ASN ALA GLU VAL ARG HIS GLU ILE GLN ASP GLY SEQRES 9 A 138 THR ILE HIS LEU TYR ILE TYR SER ILE HIS SER ILE PRO SEQRES 10 A 138 LYS GLY THR GLU ILE THR ILE ALA PHE ASP PHE ASP TYR SEQRES 11 A 138 GLY ASN ALA LYS TYR LYS VAL ASP SEQRES 1 B 138 GLY PRO THR ASN ASN LEU LEU PHE LYS PRO PRO VAL GLU SEQRES 2 B 138 SER HIS ILE GLN LYS ASN LYS LYS ILE LEU LYS SER ALA SEQRES 3 B 138 LYS ASP LEU PRO PRO ASP ALA LEU ILE ILE GLU TYR ARG SEQRES 4 B 138 GLY LYS PHE MET LEU ARG GLU GLN PHE GLU ALA ASN GLY SEQRES 5 B 138 TYR PHE PHE LYS ARG PRO TYR PRO PHE VAL LEU PHE TYR SEQRES 6 B 138 SER LYS PHE HIS GLY LEU GLU MET CYS VAL ASP ALA ARG SEQRES 7 B 138 THR PHE GLY ASN GLU ALA ARG PHE ILE ARG ARG SER CYS SEQRES 8 B 138 THR PRO ASN ALA GLU VAL ARG HIS GLU ILE GLN ASP GLY SEQRES 9 B 138 THR ILE HIS LEU TYR ILE TYR SER ILE HIS SER ILE PRO SEQRES 10 B 138 LYS GLY THR GLU ILE THR ILE ALA PHE ASP PHE ASP TYR SEQRES 11 B 138 GLY ASN ALA LYS TYR LYS VAL ASP FORMUL 3 HOH *80(H2 O) HELIX 1 AA1 ARG A 62 ASN A 68 1 7 HELIX 2 AA2 ASN A 99 ILE A 104 5 6 HELIX 3 AA3 ARG B 62 ASN B 68 1 7 HELIX 4 AA4 ASN B 99 ILE B 104 5 6 SHEET 1 AA1 2 PHE A 25 LYS A 26 0 SHEET 2 AA1 2 LYS A 41 SER A 42 -1 O LYS A 41 N LYS A 26 SHEET 1 AA2 3 LEU A 51 GLU A 54 0 SHEET 2 AA2 3 THR A 122 SER A 129 -1 O ILE A 127 N ILE A 53 SHEET 3 AA2 3 ALA A 112 GLN A 119 -1 N GLN A 119 O THR A 122 SHEET 1 AA3 3 LYS A 58 LEU A 61 0 SHEET 2 AA3 3 MET A 90 ASP A 93 -1 O ASP A 93 N LYS A 58 SHEET 3 AA3 3 VAL A 79 TYR A 82 -1 N LEU A 80 O VAL A 92 SHEET 1 AA4 2 ARG A 105 ARG A 106 0 SHEET 2 AA4 2 THR A 140 ILE A 141 1 O ILE A 141 N ARG A 105 SHEET 1 AA5 3 LEU B 51 GLU B 54 0 SHEET 2 AA5 3 THR B 122 SER B 129 -1 O ILE B 127 N ILE B 53 SHEET 3 AA5 3 ALA B 112 GLN B 119 -1 N ARG B 115 O TYR B 126 SHEET 1 AA6 3 LYS B 58 LEU B 61 0 SHEET 2 AA6 3 MET B 90 ASP B 93 -1 O CYS B 91 N MET B 60 SHEET 3 AA6 3 VAL B 79 TYR B 82 -1 N LEU B 80 O VAL B 92 SHEET 1 AA7 2 ARG B 105 ARG B 106 0 SHEET 2 AA7 2 THR B 140 ILE B 141 1 O ILE B 141 N ARG B 105 CRYST1 65.900 65.900 112.900 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015175 0.008761 0.000000 0.00000 SCALE2 0.000000 0.017522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008857 0.00000